Chy12G221930 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G221930
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Dihydroxyacetone kinase
Location	chrH12: 19494960 .. 19495772 (+)
RNA-Seq Expression	Chy12G221930
Synteny	Chy12G221930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTATACTGGTGACCGTTTAAATTTTGGTTTGGCTGCTGAGCAAGCAAAATCAGAAGGATATAAAGTAGAGGTAACTTTTCTCATTTTTTCTTCTGGTCAAGGTAAAGTGTGAAAGCAGTAATAGAATTAAAATTTAACATTTTATTTTAGAAAAGTTAGTAATATGATTTTTAGTAACCATTTAAAATATTTTTATCTTGTTCTAAAAAAAAAGTAACTATTGTTTGTTTGACCTGGAAGACTGTTATTGTTGGGGATGATTGTGCCTTGCCACCACCTCGAGGTATAACTGGCCGGAGAGGATTGGCTGGGACTATACTTGTTCACAAGGTTTGTGCTCTCTCTCTCTCTCTCTCTCTGCAACTGCATGCATGCATATATGTGTGTGTGTATATATGAGGGGGTGTCAACCTAGTTGAGATGTGTGGGTACACACGTTGATCATCTCTATTGGCTCTTCATTGTATCATCATTTTTGTATTGTCTATTCATTATCTTAATGAAGGGACTTGCTTCCTTTTACAAAAACAAAAATGATTTCCATGCAGACTAATGTTAGCTAGATTCAAAATTAGTTTTCGATTAAAATTTAAATGTTTTGATAACAACCTTACCAACACATTCATTGTCACATATATCTTTCCTTATTAGGCTCTTGACGAGTTCAAACTTTCAACTTAAATTCAAGGTCAAGTTTAATTCTAGGGGGCTGAGTTGATGTAGAGTTATCAAGGGTATTTTGGATATTTCGTGTATTTGACCAATTATGTTCTCTTTCTTTGAATTATTTCAGTTTAATGTTTTAGAATAG

mRNA sequence

AATTATACTGGTGACCGTTTAAATTTTGGTTTGGCTGCTGAGCAAGCAAAATCAGAAGGATATAAAGTAGAGACTGTTATTGTTGGGGATGATTGTGCCTTGCCACCACCTCGAGGTATAACTGGCCGGAGAGGATTGGCTGGGACTATACTTGTTCACAAGTTTAATGTTTTAGAATAG

Coding sequence (CDS)

AATTATACTGGTGACCGTTTAAATTTTGGTTTGGCTGCTGAGCAAGCAAAATCAGAAGGATATAAAGTAGAGACTGTTATTGTTGGGGATGATTGTGCCTTGCCACCACCTCGAGGTATAACTGGCCGGAGAGGATTGGCTGGGACTATACTTGTTCACAAGTTTAATGTTTTAGAATAG

Protein sequence

NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHKFNVLE*

Homology

[Close]

BLAST of Chy12G221930 vs. ExPASy Swiss-Prot
Match: O04059 (Putative 3,4-dihydroxy-2-butanone kinase OS=Solanum lycopersicum OX=4081 GN=DHBK PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.9e-24
Identity = 51/54 (94.44%), Postives = 52/54 (96.30%), Query Frame = 0


Query: 1   NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 55
           NYTGDRLNFGLAAEQAKSEGYKVE VIVGDDCALPPPRGI GRRGLAGT+LVHK
Sbjct: 114 NYTGDRLNFGLAAEQAKSEGYKVEMVIVGDDCALPPPRGIAGRRGLAGTLLVHK 167

[Close]

BLAST of Chy12G221930 vs. ExPASy Swiss-Prot
Match: Q58DK4 (Triokinase/FMN cyclase OS=Bos taurus OX=9913 GN=TKFC PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 6.7e-13
Identity = 35/54 (64.81%), Postives = 41/54 (75.93%), Query Frame = 0


Query: 1   NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 55
           NYTGDRLNFGLA EQA++EG  VE V+VGDD A    +   GRRGL GT+L+HK
Sbjct: 110 NYTGDRLNFGLAREQARAEGIPVEMVVVGDDSAFTVLKK-AGRRGLCGTVLIHK 162

[Close]

BLAST of Chy12G221930 vs. ExPASy Swiss-Prot
Match: F1RKQ4 (Triokinase/FMN cyclase OS=Sus scrofa OX=9823 GN=TKFC PE=1 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 6.7e-13
Identity = 35/54 (64.81%), Postives = 41/54 (75.93%), Query Frame = 0


Query: 1   NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 55
           NYTGDRLNFGLA EQA++EG  VE V+VGDD A    +   GRRGL GT+L+HK
Sbjct: 110 NYTGDRLNFGLAREQARAEGIPVEMVVVGDDSAFTVLKK-AGRRGLCGTVLIHK 162

[Close]

BLAST of Chy12G221930 vs. ExPASy Swiss-Prot
Match: Q3LXA3 (Triokinase/FMN cyclase OS=Homo sapiens OX=9606 GN=TKFC PE=1 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 8.8e-13
Identity = 34/54 (62.96%), Postives = 41/54 (75.93%), Query Frame = 0


Query: 1   NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 55
           NYTGDRLNFGLA EQA++EG  VE V++GDD A    +   GRRGL GT+L+HK
Sbjct: 110 NYTGDRLNFGLAREQARAEGIPVEMVVIGDDSAFTVLKK-AGRRGLCGTVLIHK 162

[Close]

BLAST of Chy12G221930 vs. ExPASy Swiss-Prot
Match: P45510 (Dihydroxyacetone kinase OS=Citrobacter freundii OX=546 GN=dhaK PE=1 SV=3)

HSP 1 Score: 73.2 bits (178), Expect = 1.1e-12
Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = 0


Query: 1   NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 55
           NYTGDRLNFGLAAE+A+  GY VE +IVGDD +LP  +     RG+AGTILVHK
Sbjct: 110 NYTGDRLNFGLAAEKARRLGYNVEMLIVGDDISLPDNK---HPRGIAGTILVHK 160

[Close]

BLAST of Chy12G221930 vs. ExPASy TrEMBL
Match: A0A5D3BKE0 (DhaK domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00260 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.3e-23
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1   NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 55
           NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK
Sbjct: 81  NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 134

[Close]

BLAST of Chy12G221930 vs. ExPASy TrEMBL
Match: A0A5A7T3H6 (Putative 3,4-dihydroxy-2-butanone kinase isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00260 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.3e-23
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1   NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 55
           NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK
Sbjct: 241 NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 294

[Close]

BLAST of Chy12G221930 vs. ExPASy TrEMBL
Match: A0A0A0LV99 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G030620 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.3e-23
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1   NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 55
           NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK
Sbjct: 114 NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 167

[Close]

BLAST of Chy12G221930 vs. ExPASy TrEMBL
Match: A0A1S3BRR7 (putative 3,4-dihydroxy-2-butanone kinase isoform X4 OS=Cucumis melo OX=3656 GN=LOC103492190 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.3e-23
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1   NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 55
           NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK
Sbjct: 114 NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 167

[Close]

BLAST of Chy12G221930 vs. ExPASy TrEMBL
Match: A0A1S4DTZ0 (putative 3,4-dihydroxy-2-butanone kinase isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492190 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.3e-23
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1   NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 55
           NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK
Sbjct: 114 NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 167

[Close]

BLAST of Chy12G221930 vs. NCBI nr
Match: CAD6219514.1 (unnamed protein product [Miscanthus lutarioriparius])

HSP 1 Score: 110 bits (276), Expect = 9.02e-30
Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 1  NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHKFNVL 58
          NYTGDRLNFGLAAEQAKSEGYK+E VIVGDDCALPPPRGI GRRGLAGTILVHK  +L
Sbjct: 38 NYTGDRLNFGLAAEQAKSEGYKMEMVIVGDDCALPPPRGIAGRRGLAGTILVHKIFLL 95

[Close]

BLAST of Chy12G221930 vs. NCBI nr
Match: PNS23277.1 (hypothetical protein POPTR_T075200 [Populus trichocarpa])

HSP 1 Score: 109 bits (272), Expect = 2.12e-29
Identity = 51/54 (94.44%), Postives = 51/54 (94.44%), Query Frame = 0


Query: 1  NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 54
          NYTGD LNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGI GRRGL GTILVHK
Sbjct: 9  NYTGDHLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGIAGRRGLTGTILVHK 62

[Close]

BLAST of Chy12G221930 vs. NCBI nr
Match: TYJ98835.1 (hypothetical protein E5676_scaffold248G00260 [Cucumis melo var. makuwa])

HSP 1 Score: 114 bits (286), Expect = 3.31e-29
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 1   NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 54
           NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK
Sbjct: 81  NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 134

[Close]

BLAST of Chy12G221930 vs. NCBI nr
Match: OAP05856.1 (hypothetical protein AXX17_AT3G18820 [Arabidopsis thaliana])

HSP 1 Score: 110 bits (276), Expect = 5.61e-29
Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 0


Query: 1   NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 54
           NYTGDRLNFGLAAEQAKSEGYKVETVIVG+DCALPPPRGI GRRGLAGT+LVHK
Sbjct: 114 NYTGDRLNFGLAAEQAKSEGYKVETVIVGEDCALPPPRGIAGRRGLAGTVLVHK 167

[Close]

BLAST of Chy12G221930 vs. NCBI nr
Match: PNT11321.1 (hypothetical protein POPTR_011G011700 [Populus trichocarpa])

HSP 1 Score: 108 bits (269), Expect = 6.07e-29
Identity = 51/54 (94.44%), Postives = 51/54 (94.44%), Query Frame = 0


Query: 1  NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 54
          NYT DRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGI GRRGL GTILVHK
Sbjct: 9  NYTSDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGIGGRRGLTGTILVHK 62

[Close]

BLAST of Chy12G221930 vs. TAIR 10
Match: AT3G17770.1 (Dihydroxyacetone kinase )

HSP 1 Score: 112.8 bits (281), Expect = 9.3e-26
Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 0


Query: 1   NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 55
           NYTGDRLNFGLAAEQAKSEGYKVETVIVG+DCALPPPRGI GRRGLAGT+LVHK
Sbjct: 114 NYTGDRLNFGLAAEQAKSEGYKVETVIVGEDCALPPPRGIAGRRGLAGTVLVHK 167

[Close]

BLAST of Chy12G221930 vs. TAIR 10
Match: AT1G48430.1 (Dihydroxyacetone kinase )

HSP 1 Score: 108.6 bits (270), Expect = 1.8e-24
Identity = 47/54 (87.04%), Postives = 52/54 (96.30%), Query Frame = 0


Query: 1   NYTGDRLNFGLAAEQAKSEGYKVETVIVGDDCALPPPRGITGRRGLAGTILVHK 55
           NYTGDRLNFGLAAEQAK+EG+ +ETVIVGDDCALPPPRG+ GRRGLAGT+LVHK
Sbjct: 114 NYTGDRLNFGLAAEQAKTEGFDIETVIVGDDCALPPPRGVAGRRGLAGTVLVHK 167

The following BLAST results are available for this feature:

BLAST of Chy12G221930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04059	2.9e-24	94.44	Putative 3,4-dihydroxy-2-butanone kinase OS=Solanum lycopersicum OX=4081 GN=DHBK...	[more]
Q58DK4	6.7e-13	64.81	Triokinase/FMN cyclase OS=Bos taurus OX=9913 GN=TKFC PE=2 SV=1	[more]
F1RKQ4	6.7e-13	64.81	Triokinase/FMN cyclase OS=Sus scrofa OX=9823 GN=TKFC PE=1 SV=2	[more]
Q3LXA3	8.8e-13	62.96	Triokinase/FMN cyclase OS=Homo sapiens OX=9606 GN=TKFC PE=1 SV=2	[more]
P45510	1.1e-12	66.67	Dihydroxyacetone kinase OS=Citrobacter freundii OX=546 GN=dhaK PE=1 SV=3	[more]

BLAST of Chy12G221930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BKE0	3.3e-23	100.00	DhaK domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7T3H6	3.3e-23	100.00	Putative 3,4-dihydroxy-2-butanone kinase isoform X2 OS=Cucumis melo var. makuwa ...	[more]
A0A0A0LV99	3.3e-23	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G030620 PE=4 SV=1	[more]
A0A1S3BRR7	3.3e-23	100.00	putative 3,4-dihydroxy-2-butanone kinase isoform X4 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A1S4DTZ0	3.3e-23	100.00	putative 3,4-dihydroxy-2-butanone kinase isoform X3 OS=Cucumis melo OX=3656 GN=L...	[more]

BLAST of Chy12G221930 vs. NCBI nr


Match Name	E-value	Identity	Description
CAD6219514.1	9.02e-30	89.66	unnamed protein product [Miscanthus lutarioriparius]	[more]
PNS23277.1	2.12e-29	94.44	hypothetical protein POPTR_T075200 [Populus trichocarpa]	[more]
TYJ98835.1	3.31e-29	100.00	hypothetical protein E5676_scaffold248G00260 [Cucumis melo var. makuwa]	[more]
OAP05856.1	5.61e-29	94.44	hypothetical protein AXX17_AT3G18820 [Arabidopsis thaliana]	[more]
PNT11321.1	6.07e-29	94.44	hypothetical protein POPTR_011G011700 [Populus trichocarpa]	[more]

BLAST of Chy12G221930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17770.1	9.3e-26	94.44	Dihydroxyacetone kinase	[more]
AT1G48430.1	1.8e-24	87.04	Dihydroxyacetone kinase	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.10440	Dihydroxyacetone kinase; domain 1	coord: 1..57 e-value: 2.2E-23 score: 84.5
None	No IPR available	PANTHER	PTHR28629:SF4	TRIOKINASE/FMN CYCLASE	coord: 1..54
None	No IPR available	PANTHER	PTHR28629	TRIOKINASE/FMN CYCLASE	coord: 1..54
None	No IPR available	SUPERFAMILY	82549	DAK1/DegV-like	coord: 1..55
IPR004006	DhaK domain	PFAM	PF02733	Dak1	coord: 1..55 e-value: 6.0E-21 score: 74.7
IPR004006	DhaK domain	PROSITE	PS51481	DHAK	coord: 1..59 score: 27.955242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G221930.1	Chy12G221930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019563	glycerol catabolic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006071	glycerol metabolic process
cellular_component	GO:0005829	cytosol
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004371	glycerone kinase activity