Chy12G220930 (gene) Cucumber (hystrix) v1

Overview
NameChy12G220930
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptiontranscription factor TCP5
LocationchrH12: 18794826 .. 18798590 (-)
RNA-Seq ExpressionChy12G220930
SyntenyChy12G220930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAAGCTGCTTCTTCTTTATTGCAAACCCTAAGGCGCTACATTAAGAAACCTTGGGAGATCACTGGCCCGTGTGCAGATCCAGAGTACAGATCGGCGGTTCCGAGCGCCTTAGAGTACAGGGTCGTTTGCCCCGCCACCATAAAGGAGAAAGCCATTATCCCGACATCCAATCCCGAAACCGTTTTTGACATTAAGTATTACACTCGCGACCAGCGTCGGAATCGCCCTCCGATTCGACGCACCATCCTCAAGAAACCCGACGTCGAGAAGATGATGAAAGAGATCAAATTCGACCCTGCTGACTTCCCCAAAGTTTATCTCACTGCCGCGATTGAGGAGGATATGAATACCCATGGGGGTGGTTATCAGAAGTAGAAAGGTTAGTCGTTTTTTGTTTTTATTTTTGGTCTCCTTCAACTGTTGGATTTAGGTTTTTTTTGTTAGAGAACCGCTGGTTATGAATCAGATGCTAAAGGCATTTTAGGATACGAAGTTGAATATATCAATACCACATTGATTATATTGCTGTTCTGTTTTTGGCCATAGTCTGCCTCATTTTCTTTGCACAATTCAGTAATCTGTCTGTTGTGTAAGCTGTGAGTTTCCCAATTATGTTTCAGATGGCATTTGTCATTTACAGATCATTGCCAATGCAGATGGTAGGATAGCTGAATATCTTGCCTCTTTATGGATGGTGGGTGCGAGGGCTAGACCAATTTCTGATTCTTAAAACAAGTAGAACCTTAACGAGCTAGGAAGTGCTTTTAGCCTTATGGTTTTTTTTTCTCTCCAGTAAATCTTTCAGGATTTGGCTTCCATTCCGTGGATATTCTTTGAAGATGTCATATGATATATACAAATTGGATTGATTAAACTACTGCTAGAGTTGTATGTTATGCATTTCTTGAAGTGCTCAGTATAGGTGAAATTCACCATCTTAGATGCTCGAATCAAATGTGTGTATCCAGTTTCATGATTTCATCCCTATCCCTAGTTATGGTTACTGATCCTTTTGCAATTTCTTTGTATCATTTTTGCTCTTAGATATTTAACCATACACAAAGTATACGTCATAAGACTCTATGTGCTACCAATATAGGGTATAAGGTACATGGGAAGAAATACTATGTTTTTTGGTTCTTTATCGGAAAAGTAGTAAGAATCATTCCTTTTCAAAAAGAAGAAAGAGGTGGAGATGGAAGAAAAAATGAAAAAATGAGGTTGAAGAAGTAGTAGCCTTTCTTAATTAATTGGGATATTCACGAGTTAAGTAATAGAAATTCTGTGTGGACGCACTGTTTCCTGCTCTGTATAGAAATGTGTATTTATTGTCAGGCAGGTGTGTTGTTTGGTGATGGCTGCGTATTAGTTTCAGCTTCAATCCCCATGTATTTTATTGAATAGCATTCAACTTCAATCGTTCTTGTTGAGCCAAATATTAATTTTGGGGGTGGGAGGATGGGGGGAAGAGAACAAGTAGCTCTCTAAGATACAGTGGCTGTACTCGAACACCCATTCTCATATGAAGTTTAGAACATTAGGCTGCTGGTGGTGGTTGTGTTTAGTTTCGGAAAATGGCACTTCTTGTTTATGAAGGACAACCTGATACCAATATAATGTTTCATTAAGAACATAATCGCAACCTTGTGAATTAATTTTATGATGTAAAATGAATTCTATTTAGTAATAATATTTCTTGCAATGATAGTATGTGCAGGCTTTCTGATACAATTAAGTTTTCCTTCTTTCATCAGGTTTGGTGGGTTCTTAAATTTTTTTCAGATCTGCTTGCTGCATTCTGGATTATTTCCTTTTGTTACTCTTGTCTTCTGCTCGATTTTCATTGCTGCTATTCTATAGCATTGTAATCCTAAGAGTTGTCCTAGTTAATAATTGTCAACATTTGCAAATTCCTGTAAATGACTATTAACTTTGGAATGTTTACCAGGTTCTTTGCGCTCTGGGCAATGTTCTCTTCAGCTTGTATTCCTCAACTCTGCTTCTCTTTCAATGTTAACCTGAGAGTGGGTTATTTAGGTATAGAAGTTTGTATGCCTAGCCTATACATTAATACAAGACATGGGATTTGGCATCAATAAAGTACATCTCCTTCTGAACTCCTCAATTTTTTGTTTCTTTTGTAACGTTTTGTGCTTGTATTACAACCATTTGCAAAACACTCTTGCTTTTCCATTGCTCCTGAATTTTAGGACATTTTGCTTGCATATCGTTATTGCTATATCCTCAGCTTTGTGTTATTTGTCTTTGACTTCAGCACTAGCAAAGCTGGGATCTGACGTATGAATAAAGAAGTGAAATTTACCTTGTCTTCAAATTTTCTTTCCCTTAATCTAAGTTTAGACGATGATCTTCATATGCAATCTTGGGGTCACTTGTACAGTCTCGTCTGGCTGCAGTTTTTCTTTTTATCGAAGCAAATTTTTATCTGGTAGTTTGTATTCTATACGGATGGAGCAACTCGTTCATTTCGAACAAAAGATTAGTTGAAAATAGTTAAGTGACTATTCATTTAAACGTTTCTTCAATGAGAATAAAGCGTAGTTTTCGAAATGGGAAGGTAAAACAGGAAAAATGTATGGTATATTGCAATACAAACCATTTTCATGGATTATTTGATACGCCATAAAATGATTTATTAAATATTTATTGTGTGGACTTCACACAACTTTAATAACTTTTCGTAGTACTAGAAGTTTTAACGGAAAAACAAAACACCTCAGTAAGCTTATGCCAAAATAACTTACTGATGCCAAAATAATTGGTCCTTCATCTAACCACAAAGCATGTCTATTGCCACACAATTCACCTTTGAAACAAAGCCATTTCACTCTATAAGGTCTCTCTCCTCAAATTACTCTAAATTTTCCTACCCTATAATTTTCTTTCCATATTTTAGGCTCCTACTCTACACACCTTTAGGGAACCCTAATTAACAAAGCTTTTAATACTCTTTTTGACTTTTAACCATCAAATCAATGCAACAAAATAAATACCCATTATCAATAGTTCTCATTGTTAAACAATCTTCTCTATCAATTCTTCCTTTTCCATTTGGCATTACAAAAAATATATTCTCTCTCTTCTCTGAAATGGGATTGTTGAAATCATGAAACCCATTTGATTGAAAGAAAAAAGATCATATTTTTGGATCATTCTATAAGCTCTGTTTTGAAGTTTAGAAGAAAAAAAAACCATAATATGATCTCAAAATTAAAGGAAGAAGGTGCTCATGATGAAGCACAACAAAGGAAGGGGAAAATGAAGAAAGCAAGAACATGTTCAAGACAAGGGCAATTTCTAAGAGGCAATCCAAGAATTTTTAGGGTTTCACCATTTTTTGGAGGTAAAGATAGGCACAGCAAAGTTTGTACAATAAAAGGGTTAAGAGATAGAAGGATTAGGCTTTCAATTCCAACAGCAATTCAACTTTATGATTTGCAAAACAAACTTGGTTTAAGCCAACCCAGCAAAGTCATTGATTGGCTTATTGATGTCACAAGGTTTGAAATTGATAAGCTCCCACCACTCCCTTTTCCAAAAGATTTTGACCCAAATGCTTCAATTCTTCACCATTCTGATATTGGAGATGCTGCTTTCAAGGCCAAAAATGAAGAAACTGATCACACACTTTTGGTTCAAACCAATGACATTAATGCAGACTGTTCCCATTTTGAACCTCCAACCTTTCCATTCCCCTTCATGGACGATCAGACTAATTCAGCTCCATTTTCCTTCTGA

mRNA sequence

ATGGCGAAAGCTGCTTCTTCTTTATTGCAAACCCTAAGGCGCTACATTAAGAAACCTTGGGAGATCACTGGCCCGTGTGCAGATCCAGAGTACAGATCGGCGGTTCCGAGCGCCTTAGAGTACAGGGTCGTTTGCCCCGCCACCATAAAGGAGAAAGCCATTATCCCGACATCCAATCCCGAAACCGTTTTTGACATTAAGTATTACACTCGCGACCAGCGTCGGAATCGCCCTCCGATTCGACGCACCATCCTCAAGAAACCCGACGTCGAGAAGATGATGAAAGAGATCAAATTCGACCCTGCTGACTTCCCCAAAGTTTATCTCACTGCCGCGATTGAGGAGGATATGAATACCCATGGGGATGGCATTTGTCATTTACAGATCATTGCCAATGCAGATGGTAGGATAGCTGAATATCTTGCCTCTTTATGGATGGTTTGGTGGGTTCTTAAATTTTTTTCAGATCTGCTTGCTGCATTCTGGATTATTTCCTTTTGTTACTCTTGTCTTCTGCTCGATTTTCATTGCTGCTATTCTATAGCATTGTTCTTTGCGCTCTGGGCAATGTTCTCTTCAGCTTGTATTCCTCAACTCTGCTTCTCTTTCAATGTTAACCTGAGAGAAGAAGGTGCTCATGATGAAGCACAACAAAGGAAGGGGAAAATGAAGAAAGCAAGAACATGTTCAAGACAAGGGCAATTTCTAAGAGGCAATCCAAGAATTTTTAGGGTTTCACCATTTTTTGGAGGTAAAGATAGGCACAGCAAAGTTTGTACAATAAAAGGGTTAAGAGATAGAAGGATTAGGCTTTCAATTCCAACAGCAATTCAACTTTATGATTTGCAAAACAAACTTGGTTTAAGCCAACCCAGCAAAGTCATTGATTGGCTTATTGATGTCACAAGGTTTGAAATTGATAAGCTCCCACCACTCCCTTTTCCAAAAGATTTTGACCCAAATGCTTCAATTCTTCACCATTCTGATATTGGAGATGCTGCTTTCAAGGCCAAAAATGAAGAAACTGATCACACACTTTTGGTTCAAACCAATGACATTAATGCAGACTGTTCCCATTTTGAACCTCCAACCTTTCCATTCCCCTTCATGGACGATCAGACTAATTCAGCTCCATTTTCCTTCTGA

Coding sequence (CDS)

ATGGCGAAAGCTGCTTCTTCTTTATTGCAAACCCTAAGGCGCTACATTAAGAAACCTTGGGAGATCACTGGCCCGTGTGCAGATCCAGAGTACAGATCGGCGGTTCCGAGCGCCTTAGAGTACAGGGTCGTTTGCCCCGCCACCATAAAGGAGAAAGCCATTATCCCGACATCCAATCCCGAAACCGTTTTTGACATTAAGTATTACACTCGCGACCAGCGTCGGAATCGCCCTCCGATTCGACGCACCATCCTCAAGAAACCCGACGTCGAGAAGATGATGAAAGAGATCAAATTCGACCCTGCTGACTTCCCCAAAGTTTATCTCACTGCCGCGATTGAGGAGGATATGAATACCCATGGGGATGGCATTTGTCATTTACAGATCATTGCCAATGCAGATGGTAGGATAGCTGAATATCTTGCCTCTTTATGGATGGTTTGGTGGGTTCTTAAATTTTTTTCAGATCTGCTTGCTGCATTCTGGATTATTTCCTTTTGTTACTCTTGTCTTCTGCTCGATTTTCATTGCTGCTATTCTATAGCATTGTTCTTTGCGCTCTGGGCAATGTTCTCTTCAGCTTGTATTCCTCAACTCTGCTTCTCTTTCAATGTTAACCTGAGAGAAGAAGGTGCTCATGATGAAGCACAACAAAGGAAGGGGAAAATGAAGAAAGCAAGAACATGTTCAAGACAAGGGCAATTTCTAAGAGGCAATCCAAGAATTTTTAGGGTTTCACCATTTTTTGGAGGTAAAGATAGGCACAGCAAAGTTTGTACAATAAAAGGGTTAAGAGATAGAAGGATTAGGCTTTCAATTCCAACAGCAATTCAACTTTATGATTTGCAAAACAAACTTGGTTTAAGCCAACCCAGCAAAGTCATTGATTGGCTTATTGATGTCACAAGGTTTGAAATTGATAAGCTCCCACCACTCCCTTTTCCAAAAGATTTTGACCCAAATGCTTCAATTCTTCACCATTCTGATATTGGAGATGCTGCTTTCAAGGCCAAAAATGAAGAAACTGATCACACACTTTTGGTTCAAACCAATGACATTAATGCAGACTGTTCCCATTTTGAACCTCCAACCTTTCCATTCCCCTTCATGGACGATCAGACTAATTCAGCTCCATTTTCCTTCTGA

Protein sequence

MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTHGDGICHLQIIANADGRIAEYLASLWMVWWVLKFFSDLLAAFWIISFCYSCLLLDFHCCYSIALFFALWAMFSSACIPQLCFSFNVNLREEGAHDEAQQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNASILHHSDIGDAAFKAKNEETDHTLLVQTNDINADCSHFEPPTFPFPFMDDQTNSAPFSF*
Homology
[Close]
BLAST of Chy12G220930 vs. ExPASy Swiss-Prot
Match: Q9FME3 (Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.9e-31
Identity = 70/122 (57.38%), Postives = 85/122 (69.67%), Query Frame = 0 

Query: 230 SRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRDRRIRLSIPTAIQLYDLQNKLGLS 289
           SRQ      NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLS+PTAIQLYDLQ++LGLS
Sbjct: 42  SRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLS 101

Query: 290 QPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNASILHHSDIGDAAFKAKNEETDHTLLVQ 349
           QPSKVIDWL++  + ++DKLPPL FP  F+    +  +   G++ F      T  T    
Sbjct: 102 QPSKVIDWLLEAAKDDVDKLPPLQFPHGFN---QMYPNLIFGNSGFGESPSSTTSTTFPG 160

Query: 350 TN 352
           TN
Sbjct: 162 TN 160

[Close]
BLAST of Chy12G220930 vs. ExPASy Swiss-Prot
Match: Q9LEZ9 (Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.9e-29
Identity = 63/93 (67.74%), Postives = 75/93 (80.65%), Query Frame = 0 

Query: 239 NPRIFRVSPFFGGKDRHSKVCTIKGLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWL 298
           NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLS+ TAIQ+YDLQ +LGLSQPSKVIDWL
Sbjct: 21  NPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVIDWL 80

Query: 299 IDVTRFEIDKLPPLPFPKDF---DPNASILHHS 329
           ++V + ++D LPPL FP  F   +PN + L  S
Sbjct: 81  LEVAKNDVDLLPPLQFPPGFHQLNPNLTGLGES 113

[Close]
BLAST of Chy12G220930 vs. ExPASy Swiss-Prot
Match: Q9S7W5 (Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.5e-28
Identity = 67/126 (53.17%), Postives = 88/126 (69.84%), Query Frame = 0 

Query: 207 LREEGAHDEAQQRKGK--MKKART--CSRQGQFLRG-NPRIFRVSPFFGGKDRHSKVCTI 266
           ++E+    E +   GK  +KK  T   S    +++  +PRI RVS  FGGKDRHSKVCT+
Sbjct: 25  VKEDQEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTL 84

Query: 267 KGLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPN 326
           +GLRDRR+RLS+PTAIQLYDLQ +LG+ QPSK +DWL+D  + EID+LPPLP   +   N
Sbjct: 85  RGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPE---N 144

Query: 327 ASILHH 328
            SI +H
Sbjct: 145 FSIFNH 147

[Close]
BLAST of Chy12G220930 vs. ExPASy Swiss-Prot
Match: Q9C758 (Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 6.2e-19
Identity = 52/100 (52.00%), Postives = 61/100 (61.00%), Query Frame = 0 

Query: 213 HDEAQQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRDRRIRLS 272
           H E Q RK +            +   + RI RVS   GGKDRHSKV T KGLRDRRIRLS
Sbjct: 12  HQEQQSRKLQRFSEDNTGLMRNWNNPSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLS 71

Query: 273 IPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPL 313
           + TAIQ YDLQ++LG  QPSK ++WLI+     I  LP L
Sbjct: 72  VATAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDLPLL 111

[Close]
BLAST of Chy12G220930 vs. ExPASy Swiss-Prot
Match: A2XMN1 (Transcription factor PCF6 OS=Oryza sativa subsp. indica OX=39946 GN=PCF6 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 8.1e-19
Identity = 53/95 (55.79%), Postives = 64/95 (67.37%), Query Frame = 0 

Query: 241 RIFRVSPFFGGKDRHSKVCTIKGLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLID 300
           RI+RV    GGKDRHSKV T KG+RDRR+RLS+ TAIQ YDLQ++LG  QPSK I+WLI+
Sbjct: 43  RIYRVRA-TGGKDRHSKVYTAKGIRDRRVRLSVATAIQFYDLQDRLGFDQPSKAIEWLIN 102

Query: 301 VTRFEIDKLPPLPFPKDFDPNA-SILHHSDIGDAA 335
                ID LP L      DP A + + H+   DAA
Sbjct: 103 AASPAIDTLPSL------DPAAFAAIPHAAAADAA 130

[Close]
BLAST of Chy12G220930 vs. ExPASy TrEMBL
Match: A0A0A0LTI3 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G039270 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 7.2e-95
Identity = 171/175 (97.71%), Postives = 173/175 (98.86%), Query Frame = 0 

Query: 207 LREEGAHDEAQQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRD 266
           L+EEGAHDEA+QRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRD
Sbjct: 5   LKEEGAHDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRD 64

Query: 267 RRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNASILH 326
           RRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNASILH
Sbjct: 65  RRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNASILH 124

Query: 327 HSDIGDAAFKAKNEETDHTLLVQTNDINADCSHFEPPTFPFPFMDDQTNSAPFSF 382
           HSDIGDAAFKAKNEETDHTLLVQTNDIN  CSHFEPPTFPFPFMDDQTNSAPFSF
Sbjct: 125 HSDIGDAAFKAKNEETDHTLLVQTNDINGVCSHFEPPTFPFPFMDDQTNSAPFSF 179

[Close]
BLAST of Chy12G220930 vs. ExPASy TrEMBL
Match: A0A5D3BIQ9 (Transcription factor TCP5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001450 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 3.7e-83
Identity = 160/177 (90.40%), Postives = 166/177 (93.79%), Query Frame = 0 

Query: 207 LREEGAHDEAQQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRD 266
           L+E+GAHDEA+Q +GK KKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRD
Sbjct: 5   LKEDGAHDEAKQMEGKRKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRD 64

Query: 267 RRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNASILH 326
           RRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPL FPKDFDPNASILH
Sbjct: 65  RRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILH 124

Query: 327 HSDI-GDAA-FKAKNEETDHTLLVQTNDINADCSHFEPPTFPFPFMDDQTNSAPFSF 382
           HSDI GDAA  KAKNEETD TLLVQTNDIN D SHFEPP+FPFPFM  QTNS+PFSF
Sbjct: 125 HSDIGGDAALMKAKNEETDQTLLVQTNDINGDSSHFEPPSFPFPFM-YQTNSSPFSF 180

[Close]
BLAST of Chy12G220930 vs. ExPASy TrEMBL
Match: A0A1S3BEN2 (transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103488791 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 3.7e-83
Identity = 160/177 (90.40%), Postives = 166/177 (93.79%), Query Frame = 0 

Query: 207 LREEGAHDEAQQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRD 266
           L+E+GAHDEA+Q +GK KKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRD
Sbjct: 5   LKEDGAHDEAKQMEGKRKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRD 64

Query: 267 RRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNASILH 326
           RRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPL FPKDFDPNASILH
Sbjct: 65  RRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILH 124

Query: 327 HSDI-GDAA-FKAKNEETDHTLLVQTNDINADCSHFEPPTFPFPFMDDQTNSAPFSF 382
           HSDI GDAA  KAKNEETD TLLVQTNDIN D SHFEPP+FPFPFM  QTNS+PFSF
Sbjct: 125 HSDIGGDAALMKAKNEETDQTLLVQTNDINGDSSHFEPPSFPFPFM-YQTNSSPFSF 180

[Close]
BLAST of Chy12G220930 vs. ExPASy TrEMBL
Match: A0A6J1KPD9 (transcription factor TCP13-like OS=Cucurbita maxima OX=3661 GN=LOC111495302 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 2.9e-64
Identity = 132/190 (69.47%), Postives = 146/190 (76.84%), Query Frame = 0 

Query: 207 LREEGAHDEAQQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRD 266
           L++EG H EA+Q +GK KK    SRQG FLRGNPRIFRVSP FGGKDRHSKVCT+KGLRD
Sbjct: 12  LKQEGVHVEAKQMEGKRKKGP--SRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMKGLRD 71

Query: 267 RRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNASILH 326
           RRIRLS PTAIQLYDLQN+LGLSQPSKVIDWL+DVTRF+IDKLPPL FPKDFDPNAS LH
Sbjct: 72  RRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLMDVTRFDIDKLPPLHFPKDFDPNASFLH 131

Query: 327 HSDIGDAAFKAKNEETDHTLL----------------VQTNDINADCSHFEPPTFPFPFM 381
           H DI DAA KAK+EET   LL                +QTN +  +C HF+PP+FPFP M
Sbjct: 132 HFDIADAAAKAKHEETGMLLLQKSSPSPNHASFSALQLQTNAMTENCCHFDPPSFPFPLM 191

[Close]
BLAST of Chy12G220930 vs. ExPASy TrEMBL
Match: A0A0A0LVM5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039260 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.2e-62
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 0 

Query: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60
           MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP
Sbjct: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH
Sbjct: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH 120

Query: 121 GDG 124
           G G
Sbjct: 121 GGG 123

[Close]
BLAST of Chy12G220930 vs. NCBI nr
Match: KAG7019990.1 (Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 440 bits (1131), Expect = 6.27e-151
Identity = 240/396 (60.61%), Postives = 264/396 (66.67%), Query Frame = 0 

Query: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60
           MAKA+SS  QTL+RYIKKPWEITGPCADPEY+ AVPSA+EYRV CPAT KEKAI+PTSNP
Sbjct: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 60

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIKFDPADFPKVYLTAAIEEDMNTH 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKE KFDPADFPKVYLTAAIEED+N  
Sbjct: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDINAR 120

Query: 121 GDGICHLQIIANADGRIAEYLASLWMVWWVLKFFSDLLAAFWIISFCYSCLLLDFHCCYS 180
           G             GR+   ++                                      
Sbjct: 121 G---------GEMTGRVNNMISK------------------------------------- 180

Query: 181 IALFFALWAMFSSACIPQLCFSFNVNLREEGAHDEAQQRKGKMKKARTCSRQGQFLRGNP 240
                                     L++EG H EA+Q +GK KK    SRQG FLRGNP
Sbjct: 181 --------------------------LKQEGVHVEAKQMEGKRKKG--PSRQGPFLRGNP 240

Query: 241 RIFRVSPFFGGKDRHSKVCTIKGLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLID 300
           RIFRVSP FGGKDRHSKVCT+KGLRDRRIRLS PTAIQLYDLQN+LGLS+PSKVIDWLID
Sbjct: 241 RIFRVSPLFGGKDRHSKVCTMKGLRDRRIRLSAPTAIQLYDLQNRLGLSRPSKVIDWLID 300

Query: 301 VTRFEIDKLPPLPFPKDFDPNASILHHSDIGDAAFKAKNEETDHTLL------------- 360
           VTRF+IDKLPPL FPKDFDPNAS LHH DI DAA KAK+EET   LL             
Sbjct: 301 VTRFDIDKLPPLHFPKDFDPNASFLHHLDISDAAAKAKHEETGMLLLQKLSPSPNHASFS 321

Query: 361 ---VQTNDINADCSHFEPPTFPFPFMDDQTNSAPFS 380
              ++TN +  +C HF+PP+FPFP M DQ N A FS
Sbjct: 361 ALQLRTNAMTENCCHFDPPSFPFPLM-DQANPASFS 321

[Close]
BLAST of Chy12G220930 vs. NCBI nr
Match: XP_011660343.1 (transcription factor TCP5 [Cucumis sativus] >KGN64062.1 hypothetical protein Csa_014153 [Cucumis sativus])

HSP 1 Score: 355 bits (910), Expect = 6.04e-120
Identity = 171/175 (97.71%), Postives = 173/175 (98.86%), Query Frame = 0 

Query: 207 LREEGAHDEAQQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRD 266
           L+EEGAHDEA+QRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRD
Sbjct: 5   LKEEGAHDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRD 64

Query: 267 RRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNASILH 326
           RRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNASILH
Sbjct: 65  RRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNASILH 124

Query: 327 HSDIGDAAFKAKNEETDHTLLVQTNDINADCSHFEPPTFPFPFMDDQTNSAPFSF 381
           HSDIGDAAFKAKNEETDHTLLVQTNDIN  CSHFEPPTFPFPFMDDQTNSAPFSF
Sbjct: 125 HSDIGDAAFKAKNEETDHTLLVQTNDINGVCSHFEPPTFPFPFMDDQTNSAPFSF 179

[Close]
BLAST of Chy12G220930 vs. NCBI nr
Match: XP_008445912.1 (PREDICTED: transcription factor TCP5 [Cucumis melo] >TYJ98944.1 transcription factor TCP5 [Cucumis melo var. makuwa])

HSP 1 Score: 316 bits (810), Expect = 9.40e-105
Identity = 160/177 (90.40%), Postives = 166/177 (93.79%), Query Frame = 0 

Query: 207 LREEGAHDEAQQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRD 266
           L+E+GAHDEA+Q +GK KKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRD
Sbjct: 5   LKEDGAHDEAKQMEGKRKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRD 64

Query: 267 RRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNASILH 326
           RRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPL FPKDFDPNASILH
Sbjct: 65  RRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILH 124

Query: 327 HSDIG-DAAF-KAKNEETDHTLLVQTNDINADCSHFEPPTFPFPFMDDQTNSAPFSF 381
           HSDIG DAA  KAKNEETD TLLVQTNDIN D SHFEPP+FPFPFM  QTNS+PFSF
Sbjct: 125 HSDIGGDAALMKAKNEETDQTLLVQTNDINGDSSHFEPPSFPFPFM-YQTNSSPFSF 180

[Close]
BLAST of Chy12G220930 vs. NCBI nr
Match: XP_038895251.1 (transcription factor PCF6 [Benincasa hispida])

HSP 1 Score: 254 bits (650), Expect = 4.14e-80
Identity = 137/196 (69.90%), Postives = 146/196 (74.49%), Query Frame = 0 

Query: 207 LREEGAHDEAQQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRD 266
           L +EG HDEA+Q +GK KKA        FLRGNPRI RVS  FGGKDRHSKVCT+KGLRD
Sbjct: 5   LTKEGVHDEAKQMEGKRKKA--------FLRGNPRILRVSSLFGGKDRHSKVCTVKGLRD 64

Query: 267 RRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNASILH 326
           RRIRLS+PTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPL FPKDFDPNASILH
Sbjct: 65  RRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILH 124

Query: 327 HS----------DIGDAAFKAKNEETDHTLL-----------VQTNDINADCSHFEPPTF 381
           HS          DI DAA  AKNEETD  LL           VQTN I  +C HF+PP+F
Sbjct: 125 HSSLFLPQIPHFDIADAAVTAKNEETDQRLLLHKLSSLSALQVQTNAIKENCCHFQPPSF 184

[Close]
BLAST of Chy12G220930 vs. NCBI nr
Match: XP_023001048.1 (transcription factor TCP13-like [Cucurbita maxima])

HSP 1 Score: 253 bits (647), Expect = 1.94e-79
Identity = 132/190 (69.47%), Postives = 146/190 (76.84%), Query Frame = 0 

Query: 207 LREEGAHDEAQQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRD 266
           L++EG H EA+Q +GK KK    SRQG FLRGNPRIFRVSP FGGKDRHSKVCT+KGLRD
Sbjct: 12  LKQEGVHVEAKQMEGKRKKG--PSRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMKGLRD 71

Query: 267 RRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNASILH 326
           RRIRLS PTAIQLYDLQN+LGLSQPSKVIDWL+DVTRF+IDKLPPL FPKDFDPNAS LH
Sbjct: 72  RRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLMDVTRFDIDKLPPLHFPKDFDPNASFLH 131

Query: 327 HSDIGDAAFKAKNEETDHTLL----------------VQTNDINADCSHFEPPTFPFPFM 380
           H DI DAA KAK+EET   LL                +QTN +  +C HF+PP+FPFP M
Sbjct: 132 HFDIADAAAKAKHEETGMLLLQKSSPSPNHASFSALQLQTNAMTENCCHFDPPSFPFPLM 191

[Close]
BLAST of Chy12G220930 vs. TAIR 10
Match: AT5G08060.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 170.6 bits (431), Expect = 2.4e-42
Identity = 82/124 (66.13%), Postives = 101/124 (81.45%), Query Frame = 0 

Query: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60
           ++ AASSL+Q LRRYIKKPW+ITGPCA PEY  AVP A EYR+ CPATI E+AI+P+S+P
Sbjct: 5   VSTAASSLVQNLRRYIKKPWQITGPCAHPEYLEAVPKATEYRLRCPATIDEEAIVPSSDP 64

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKEIK-FDPADFPKVYLTAAIEEDMNT 120
           ETV++I Y+ RDQRRNRPPIRR +L K +V +MM E K FD +DFPKVYLT  +EED++T
Sbjct: 65  ETVYNIVYHGRDQRRNRPPIRRYVLTKDNVVQMMNEKKSFDVSDFPKVYLTTTVEEDLDT 124

Query: 121 HGDG 124
            G G
Sbjct: 125 RGGG 128

[Close]
BLAST of Chy12G220930 vs. TAIR 10
Match: AT5G60970.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 )

HSP 1 Score: 138.3 bits (347), Expect = 1.3e-32
Identity = 70/122 (57.38%), Postives = 85/122 (69.67%), Query Frame = 0 

Query: 230 SRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRDRRIRLSIPTAIQLYDLQNKLGLS 289
           SRQ      NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLS+PTAIQLYDLQ++LGLS
Sbjct: 42  SRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLS 101

Query: 290 QPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNASILHHSDIGDAAFKAKNEETDHTLLVQ 349
           QPSKVIDWL++  + ++DKLPPL FP  F+    +  +   G++ F      T  T    
Sbjct: 102 QPSKVIDWLLEAAKDDVDKLPPLQFPHGFN---QMYPNLIFGNSGFGESPSSTTSTTFPG 160

Query: 350 TN 352
           TN
Sbjct: 162 TN 160

[Close]
BLAST of Chy12G220930 vs. TAIR 10
Match: AT5G08070.1 (TCP domain protein 17 )

HSP 1 Score: 130.6 bits (327), Expect = 2.7e-30
Identity = 63/93 (67.74%), Postives = 75/93 (80.65%), Query Frame = 0 

Query: 239 NPRIFRVSPFFGGKDRHSKVCTIKGLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWL 298
           NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLS+ TAIQ+YDLQ +LGLSQPSKVIDWL
Sbjct: 21  NPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVIDWL 80

Query: 299 IDVTRFEIDKLPPLPFPKDF---DPNASILHHS 329
           ++V + ++D LPPL FP  F   +PN + L  S
Sbjct: 81  LEVAKNDVDLLPPLQFPPGFHQLNPNLTGLGES 113

[Close]
BLAST of Chy12G220930 vs. TAIR 10
Match: AT3G02150.1 (plastid transcription factor 1 )

HSP 1 Score: 127.9 bits (320), Expect = 1.8e-29
Identity = 67/126 (53.17%), Postives = 88/126 (69.84%), Query Frame = 0 

Query: 207 LREEGAHDEAQQRKGK--MKKART--CSRQGQFLRG-NPRIFRVSPFFGGKDRHSKVCTI 266
           ++E+    E +   GK  +KK  T   S    +++  +PRI RVS  FGGKDRHSKVCT+
Sbjct: 25  VKEDQEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTL 84

Query: 267 KGLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPN 326
           +GLRDRR+RLS+PTAIQLYDLQ +LG+ QPSK +DWL+D  + EID+LPPLP   +   N
Sbjct: 85  RGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPE---N 144

Query: 327 ASILHH 328
            SI +H
Sbjct: 145 FSIFNH 147

[Close]
BLAST of Chy12G220930 vs. TAIR 10
Match: AT3G02150.2 (plastid transcription factor 1 )

HSP 1 Score: 127.9 bits (320), Expect = 1.8e-29
Identity = 67/126 (53.17%), Postives = 88/126 (69.84%), Query Frame = 0 

Query: 207 LREEGAHDEAQQRKGK--MKKART--CSRQGQFLRG-NPRIFRVSPFFGGKDRHSKVCTI 266
           ++E+    E +   GK  +KK  T   S    +++  +PRI RVS  FGGKDRHSKVCT+
Sbjct: 25  VKEDQEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTL 84

Query: 267 KGLRDRRIRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPN 326
           +GLRDRR+RLS+PTAIQLYDLQ +LG+ QPSK +DWL+D  + EID+LPPLP   +   N
Sbjct: 85  RGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPE---N 144

Query: 327 ASILHH 328
            SI +H
Sbjct: 145 FSIFNH 147

The following BLAST results are available for this feature:
BLAST of Chy12G220930 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FME31.9e-3157.38Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1[more]
Q9LEZ93.9e-2967.74Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1[more]
Q9S7W52.5e-2853.17Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1[more]
Q9C7586.2e-1952.00Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1[more]
A2XMN18.1e-1955.79Transcription factor PCF6 OS=Oryza sativa subsp. indica OX=39946 GN=PCF6 PE=4 SV... [more]
BLAST of Chy12G220930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTI37.2e-9597.71TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G039270 PE=4 SV... [more]
A0A5D3BIQ93.7e-8390.40Transcription factor TCP5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3BEN23.7e-8390.40transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103488791 PE=4 SV=1[more]
A0A6J1KPD92.9e-6469.47transcription factor TCP13-like OS=Cucurbita maxima OX=3661 GN=LOC111495302 PE=4... [more]
A0A0A0LVM51.2e-6299.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039260 PE=4 SV=1[more]
BLAST of Chy12G220930 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7019990.16.27e-15160.61Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_011660343.16.04e-12097.71transcription factor TCP5 [Cucumis sativus] >KGN64062.1 hypothetical protein Csa... [more]
XP_008445912.19.40e-10590.40PREDICTED: transcription factor TCP5 [Cucumis melo] >TYJ98944.1 transcription fa... [more]
XP_038895251.14.14e-8069.90transcription factor PCF6 [Benincasa hispida][more]
XP_023001048.11.94e-7969.47transcription factor TCP13-like [Cucurbita maxima][more]
BLAST of Chy12G220930 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G08060.12.4e-4266.13unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G60970.11.3e-3257.38TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 [more]
AT5G08070.12.7e-3067.74TCP domain protein 17 [more]
AT3G02150.11.8e-2953.17plastid transcription factor 1 [more]
AT3G02150.21.8e-2953.17plastid transcription factor 1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017887Transcription factor TCP subgroupPFAMPF03634TCPcoord: 251..319
e-value: 1.3E-22
score: 81.0
IPR017887Transcription factor TCP subgroupPROSITEPS51369TCPcoord: 251..309
score: 25.948359
NoneNo IPR availablePANTHERPTHR31072:SF154TCP FAMILY TRANSCRIPTION FACTORcoord: 209..318
IPR005333Transcription factor, TCPPANTHERPTHR31072TRANSCRIPTION FACTOR TCP4-RELATEDcoord: 209..318

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy12G220930.1Chy12G220930.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0043565 sequence-specific DNA binding