Chy12G220530 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G220530
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	transcription factor TCP18-like
Location	chrH12: 18507587 .. 18508824 (+)
RNA-Seq Expression	Chy12G220530
Synteny	Chy12G220530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTTCTCCACAAATAGTAGTGGTACTACCAAAAATGTCCATGACCCATTTGGTAATTTGTCTCATGATCTTGACCATTCATTCCATCTTCCCATCTCTTTCTTCCCCTTTCCGTCTCCTTTTGAAGTTGATGATGATCGTGATCTCAATTTCACTACTAATTCTCCCCCTAATTCTTCTCAAAATTATAATAATAATCCTCCTCCTATTATTTCCACTTGTAATAGCCCTCCTATTGACAACATGAGCATGGTGATGATGAATTCAGATCAAAAGATGAAGAAGACGATGAAGAAAGTCCCACAAAGAAAAAGATTGTCAAAAAAAGATAGACATAGCAAAATCACAACAGCTAAAGGGGTAAGAGATAGAAGAATGAGGCTTTCTTTGCCAGTGGCTAAGCAATTCTTTGGATTACAAGACATGTTGGGTGTTGATAAAGGTAGCAAAACAGTTGAATGGTTATTGATTCAAGCCAAGCCTGAAATTTTGAAACTTGCTAGAGAGAAAAAAAACCATAATTGTTTCACGATCAGTAATTCTTCTTCTAATTATTCCAATTCTTCAGAGCTTGATAATGAAGTTGGAGTAATTATTGGTGATCAAAATTTGAATACCAAAGATAATAATATCAAAATTAGTAAGAAGAAGATCAAGAAGAAGAAGATTATGAGAGCCAAACAACTGCCAATTAGAAAAACCATGGCCAAAGAATTGAGAGAAAAGGCAAGAGAAAGAGCAAGAGCAAGAACTTTGGAGAAGCTGAAAAGTCAGATGTTTATTAGGGATTCCGCTTGTTGTTCAGATGATCATCAACCAAATTTTACCAACATTAATTCATCTTCTTCTTGGAGCAGTCCTTTTGAAACTACTGGTGGAGAGGAATCAGCTGGTACTACTACTCATCAAAGCTACAATAATAATAATCATCCAATCACTTCCCAGTTTGATTCTCAATTCCACCAAATTTTTTCTTCTTTTGATGTTATTTTGCCAAAGTGGAGCCCATCTGATGATTCAACTTTCAATTTTCTGCATCAACAGGTGAGTTTTGAAGTTAATTTACTATTATTTTTCATCTTTAATCTTAATCAAACAGTCAAGTCTGAAAAAAATATTTAGCGAGGACAAAAATGAAGTGCATGGGTATAGAAAATTTTATGATTCTGATCAAACCCATTCAACGTTTTTTCTTTTTGTAGCATGAATTTGAAGACTCTGATATCTTTGGATAA

mRNA sequence

ATGTTCTTCTCCACAAATAGTAGTGGTACTACCAAAAATGTCCATGACCCATTTGGTAATTTGTCTCATGATCTTGACCATTCATTCCATCTTCCCATCTCTTTCTTCCCCTTTCCGTCTCCTTTTGAAGTTGATGATGATCGTGATCTCAATTTCACTACTAATTCTCCCCCTAATTCTTCTCAAAATTATAATAATAATCCTCCTCCTATTATTTCCACTTGTAATAGCCCTCCTATTGACAACATGAGCATGGTGATGATGAATTCAGATCAAAAGATGAAGAAGACGATGAAGAAAGTCCCACAAAGAAAAAGATTGTCAAAAAAAGATAGACATAGCAAAATCACAACAGCTAAAGGGGTAAGAGATAGAAGAATGAGGCTTTCTTTGCCAGTGGCTAAGCAATTCTTTGGATTACAAGACATGTTGGGTGTTGATAAAGGTAGCAAAACAGTTGAATGGTTATTGATTCAAGCCAAGCCTGAAATTTTGAAACTTGCTAGAGAGAAAAAAAACCATAATTGTTTCACGATCAGTAATTCTTCTTCTAATTATTCCAATTCTTCAGAGCTTGATAATGAAGTTGGAGTAATTATTGGTGATCAAAATTTGAATACCAAAGATAATAATATCAAAATTAGTAAGAAGAAGATCAAGAAGAAGAAGATTATGAGAGCCAAACAACTGCCAATTAGAAAAACCATGGCCAAAGAATTGAGAGAAAAGGCAAGAGAAAGAGCAAGAGCAAGAACTTTGGAGAAGCTGAAAAGTCAGATGTTTATTAGGGATTCCGCTTGTTGTTCAGATGATCATCAACCAAATTTTACCAACATTAATTCATCTTCTTCTTGGAGCAGTCCTTTTGAAACTACTGGTGGAGAGGAATCAGCTGGTACTACTACTCATCAAAGCTACAATAATAATAATCATCCAATCACTTCCCAGTTTGATTCTCAATTCCACCAAATTTTTTCTTCTTTTGATGTTATTTTGCCAAAGTGGAGCCCATCTGATGATTCAACTTTCAATTTTCTGCATCAACAGCATGAATTTGAAGACTCTGATATCTTTGGATAA

Coding sequence (CDS)

ATGTTCTTCTCCACAAATAGTAGTGGTACTACCAAAAATGTCCATGACCCATTTGGTAATTTGTCTCATGATCTTGACCATTCATTCCATCTTCCCATCTCTTTCTTCCCCTTTCCGTCTCCTTTTGAAGTTGATGATGATCGTGATCTCAATTTCACTACTAATTCTCCCCCTAATTCTTCTCAAAATTATAATAATAATCCTCCTCCTATTATTTCCACTTGTAATAGCCCTCCTATTGACAACATGAGCATGGTGATGATGAATTCAGATCAAAAGATGAAGAAGACGATGAAGAAAGTCCCACAAAGAAAAAGATTGTCAAAAAAAGATAGACATAGCAAAATCACAACAGCTAAAGGGGTAAGAGATAGAAGAATGAGGCTTTCTTTGCCAGTGGCTAAGCAATTCTTTGGATTACAAGACATGTTGGGTGTTGATAAAGGTAGCAAAACAGTTGAATGGTTATTGATTCAAGCCAAGCCTGAAATTTTGAAACTTGCTAGAGAGAAAAAAAACCATAATTGTTTCACGATCAGTAATTCTTCTTCTAATTATTCCAATTCTTCAGAGCTTGATAATGAAGTTGGAGTAATTATTGGTGATCAAAATTTGAATACCAAAGATAATAATATCAAAATTAGTAAGAAGAAGATCAAGAAGAAGAAGATTATGAGAGCCAAACAACTGCCAATTAGAAAAACCATGGCCAAAGAATTGAGAGAAAAGGCAAGAGAAAGAGCAAGAGCAAGAACTTTGGAGAAGCTGAAAAGTCAGATGTTTATTAGGGATTCCGCTTGTTGTTCAGATGATCATCAACCAAATTTTACCAACATTAATTCATCTTCTTCTTGGAGCAGTCCTTTTGAAACTACTGGTGGAGAGGAATCAGCTGGTACTACTACTCATCAAAGCTACAATAATAATAATCATCCAATCACTTCCCAGTTTGATTCTCAATTCCACCAAATTTTTTCTTCTTTTGATGTTATTTTGCCAAAGTGGAGCCCATCTGATGATTCAACTTTCAATTTTCTGCATCAACAGCATGAATTTGAAGACTCTGATATCTTTGGATAA

Protein sequence

MFFSTNSSGTTKNVHDPFGNLSHDLDHSFHLPISFFPFPSPFEVDDDRDLNFTTNSPPNSSQNYNNNPPPIISTCNSPPIDNMSMVMMNSDQKMKKTMKKVPQRKRLSKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLAREKKNHNCFTISNSSSNYSNSSELDNEVGVIIGDQNLNTKDNNIKISKKKIKKKKIMRAKQLPIRKTMAKELREKARERARARTLEKLKSQMFIRDSACCSDDHQPNFTNINSSSSWSSPFETTGGEESAGTTTHQSYNNNNHPITSQFDSQFHQIFSSFDVILPKWSPSDDSTFNFLHQQHEFEDSDIFG*

Homology

[Close]

BLAST of Chy12G220530 vs. ExPASy Swiss-Prot
Match: A1YKT1 (Transcription factor TCP18 OS=Arabidopsis thaliana OX=3702 GN=TCP18 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.8e-26
Identity = 130/390 (33.33%), Postives = 181/390 (46.41%), Query Frame = 0


Query: 3   FSTNSSGTTKNVHDPFGNLSHDLD--HSFHLPISFFPFPSPFEVDDDRDLNFTTNSPPNS 62
           FS +SS     +H      ++ LD  H F  P  F    S FE   D  L  T+  P N+
Sbjct: 33  FSPSSSINDILIHSTSNTSNNHLDHHHQFQQPSPF----SHFEFAPDCAL-LTSFHPENN 92

Query: 63  SQNYNNNPP----------PIISTCNSPPIDNMSMVMMNSDQKMKKTMK--KVPQRKRLS 122
             + N   P          P+ +T    P +    + +  D +   T +  K+ + K+ S
Sbjct: 93  GHDDNQTIPNDNHHPSLHFPLNNTIVEQPTEPSETINLIEDSQRISTSQDPKMKKAKKPS 152

Query: 123 KKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLA 182
           + DRHSKI TAKG RDRRMRLSL VAK+ FGLQDMLG DK SKTVEWLL QAKPEI+K+A
Sbjct: 153 RTDRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTVEWLLTQAKPEIIKIA 212

Query: 183 REKKNHNCFTISNSS------SNYSNSSELDNEVGV-IIGDQNLNTKDNNI---KISKKK 242
               +H CF+  + S       +   SS+L     +  + D+  NT        K+  + 
Sbjct: 213 TTLSHHGCFSSGDESHIRPVLGSMDTSSDLCELASMWTVDDRGSNTNTTETRGNKVDGRS 272

Query: 243 IKKKKIMRAKQLPIRKTMAKELREKARERARARTLEKLKSQMFIRDSAC-----CSDDHQ 302
           ++ K+     + PI K ++KE R KARERA+ RT+EK+  +M  R          + DH 
Sbjct: 273 MRGKRKRPEPRTPILKKLSKEERAKARERAKGRTMEKMMMKMKGRSQLVKVVEEDAHDHG 332

Query: 303 PNFTNINSSSSWSSPFETTGGEESA---------GTTTHQSYNNNNHPITSQFDSQFHQI 355
               N N S    S FE T  E+                   N  +H     +D   ++ 
Sbjct: 333 EIIKNNNRSQVNRSSFEMTHCEDKIEELCKNDRFAVCNEFIMNKKDHISNESYDLVNYKP 392

[Close]

BLAST of Chy12G220530 vs. ExPASy Swiss-Prot
Match: Q93WI2 (Transcription factor TEOSINTE BRANCHED 1 OS=Zea mays OX=4577 GN=TB1 PE=2 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 7.1e-17
Identity = 74/192 (38.54%), Postives = 99/192 (51.56%), Query Frame = 0


Query: 108 SKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKL 167
           ++KDRHSKI TA G+RDRRMRLSL VA++FF LQDMLG DK SKTV+WLL  +K  I ++
Sbjct: 113 ARKDRHSKICTAGGMRDRRMRLSLDVARKFFALQDMLGFDKASKTVQWLLNTSKSAIQEI 172

Query: 168 AREKKNHNCFTISNSSSNYSNSSELDNEVGVIIGDQNLNTKDNNIKISKKKIKKKKIMRA 227
             +  +  C    +SS +         ++G   G  +   K N     KK  K  K    
Sbjct: 173 MADDASSECVEDGSSSLSVDGKHNPAEQLG---GGGDQKPKGNCRGEGKKPAKASKAAAT 232

Query: 228 KQLP------IRKTMAKELREKARERARARTLE-------KLKSQMFIRDSACCSDDHQP 287
            + P        +   KE R KARERAR RT E       KL S + +  +A      +P
Sbjct: 233 PKPPRKSANNAHQVPDKETRAKARERARERTKEKHRMRWVKLASAIDVEAAAASGPSDRP 292

[Close]

BLAST of Chy12G220530 vs. ExPASy Swiss-Prot
Match: A0AQW4 (Transcription factor TCP12 OS=Arabidopsis thaliana OX=3702 GN=TCP12 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 7.1e-17
Identity = 68/177 (38.42%), Postives = 97/177 (54.80%), Query Frame = 0


Query: 97  TMKKVPQRKRLSKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWL 156
           T ++V  R+ + K+DRHSKI TA+G RDRRMRLSL +A++FF LQDMLG DK SKT+EWL
Sbjct: 100 TSQEVQWRRTVKKRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWL 159

Query: 157 LIQAKPEILKLAREKKNHNCFTISNSSSNYSNSSELDNEVGVIIGDQNLNTKDNNIKISK 216
             ++K  I +L            ++         ++D +            KD  +K+  
Sbjct: 160 FSKSKTSIKQLKER-------VAASEGGGKDEHLQVDEK-----------EKDETLKLRV 219

Query: 217 KKIKKKKIMRAKQLPIRKTMAKELREKARERARARTLEKLKSQMFIRDSACCSDDHQ 274
            K ++ K M +          KE RE+AR+RAR RT+ K+K ++F   S   SD HQ
Sbjct: 220 SK-RRTKTMES------SFKTKESRERARKRARERTMAKMKMRLF-ETSETISDPHQ 250

[Close]

BLAST of Chy12G220530 vs. ExPASy Swiss-Prot
Match: O49250 (Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.9e-15
Identity = 72/191 (37.70%), Postives = 108/191 (56.54%), Query Frame = 0


Query: 72  ISTCNSPPIDNMSMVMMNSD------QKMKKTMKKVPQRKRLSKKDRHSKITTAKGVRDR 131
           ++T N+P +++ ++   N++        + +        K+  KKDRHSKI T++G RDR
Sbjct: 44  LTTANAPVLESTALFNNNNNFNHDVVNGLNRDPSPTFPTKQAVKKDRHSKIYTSQGPRDR 103

Query: 132 RMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLAREKKNHNCFTISNSSSN 191
           R+RLS+ +A++FF LQ+MLG DK SKT++WLL ++K  I +L + K      T SNSSS 
Sbjct: 104 RVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELVQSKS-----TKSNSSSP 163

Query: 192 YSNSSELDNEVGVIIGDQNLNTKDNNIKISKKKIKKKKIMRAKQLPIRKTMAKELREKAR 251
             +  E+     V +  +N+ T  +  K  K   K K+ M + Q       AKE R KAR
Sbjct: 164 CDDCEEV-----VSVDSENV-TDHSKGKSLKANNKCKEAMDSHQ-----AAAKESRAKAR 218

Query: 252 ERARARTLEKL 257
            RAR RT EK+
Sbjct: 224 ARARERTKEKM 218

[Close]

BLAST of Chy12G220530 vs. ExPASy Swiss-Prot
Match: Q9SBV6 (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum linkianum OX=102601 GN=CYC PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.1e-13
Identity = 85/259 (32.82%), Postives = 138/259 (53.28%), Query Frame = 0


Query: 72  ISTCNSPPIDNMSMVMMNSD------QKMKKTMKKVPQRKRLSKKDRHSKITTAKGVRDR 131
           ++T N+P +++ ++   N++        + +        K+  KKDRHSKI T++G RDR
Sbjct: 36  LTTANAPVLESTALFNNNNNFNHDVVNGLNRDPSPTFPTKQAVKKDRHSKIYTSQGPRDR 95

Query: 132 RMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLAREKKNHNCFTISNSSSN 191
           R+RLS+ +A++FF LQ+MLG DK SKT++WLL ++K  I +L + K      T SNSSS 
Sbjct: 96  RVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELVQSKS-----TKSNSSSP 155

Query: 192 YSNSSELDNEVGVIIGDQNLNTKDNNIKISKKKIKKKKIMRAKQLPIRKTMAKELREKAR 251
             +  E+     V +  +N+ T  +  K  K   K K+ M + Q       AKE R KAR
Sbjct: 156 CDDCEEV-----VSVDSENV-TDHSKGKSLKANNKCKEAMDSHQ-----AAAKESRAKAR 215

Query: 252 ERARARTLEKLKSQMFIRDSACCSDDHQPNFTNINSSSSWSSPFETTGGEESAGTTTHQS 311
            RAR RT EK+  +    + A    +HQ  F    +  ++  P      +++ G T+H++
Sbjct: 216 ARARERTKEKMCIKQL--NEAIVLRNHQ--FEVSGTREAFVHPV-FGFHQQNYGNTSHEN 267

Query: 312 YNNNNHPITSQFDSQFHQI 325
           ++ +N      F SQ +Q+
Sbjct: 276 WDQSN------FASQSNQL 267

[Close]

BLAST of Chy12G220530 vs. ExPASy TrEMBL
Match: A0A0A0LVQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042180 PE=4 SV=1)

HSP 1 Score: 681.8 bits (1758), Expect = 1.6e-192
Identity = 353/359 (98.33%), Postives = 355/359 (98.89%), Query Frame = 0


Query: 1   MFFSTNSSGTTKNVHDPFGNLSHDLDHSFHLPISFFPFPSPFEVDDDRDLNFTTNSPPNS 60
           MFFSTNSSG TKNVHDPFGNLSHDLDHSFHLPISFFPFPSPFEVDDDRDLNFTTNSP NS
Sbjct: 1   MFFSTNSSGNTKNVHDPFGNLSHDLDHSFHLPISFFPFPSPFEVDDDRDLNFTTNSPSNS 60

Query: 61  SQNYNNNPPPIISTCNSPPIDNMSMVMMNSDQKMKKTMKKVPQRKRLSKKDRHSKITTAK 120
           SQNYNNNPPPIISTCNSPPIDNMSMV+MNSDQKMKK MKKVPQRKRLSKKDRHSKITTAK
Sbjct: 61  SQNYNNNPPPIISTCNSPPIDNMSMVVMNSDQKMKKMMKKVPQRKRLSKKDRHSKITTAK 120

Query: 121 GVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLAREKKNHNCFTIS 180
           GVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLA EKKNHNCFTIS
Sbjct: 121 GVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLATEKKNHNCFTIS 180

Query: 181 NSSSNYSNSSELDNEVGVIIGDQNLNTKDNNIKISKKKIKKKKIMRAKQLPIRKTMAKEL 240
           NSSSNYSNSSELDNEVGVIIGDQNLNTKDNNIKISKKKIKKKKIMRAKQLPIRKTMAKEL
Sbjct: 181 NSSSNYSNSSELDNEVGVIIGDQNLNTKDNNIKISKKKIKKKKIMRAKQLPIRKTMAKEL 240

Query: 241 REKARERARARTLEKLKSQMFIRDSACCSDDHQPNFTNINSSSSWSSPFETTGGEESAGT 300
           REKARERARARTLEKLKSQMFIRDSACCSDDHQPNFTNINSSSSWSSPFETTGGEESAGT
Sbjct: 241 REKARERARARTLEKLKSQMFIRDSACCSDDHQPNFTNINSSSSWSSPFETTGGEESAGT 300

Query: 301 TTHQSYNNNNHPITSQFDSQFHQIFSSFDVILPKWSPSDDSTFNFLHQQHEFEDSDIFG 360
           TTHQSYNNNN+PITSQFDSQFHQIFSSFDVILPKWSPSDDSTFNFLHQQHEFEDSDIFG
Sbjct: 301 TTHQSYNNNNNPITSQFDSQFHQIFSSFDVILPKWSPSDDSTFNFLHQQHEFEDSDIFG 359

[Close]

BLAST of Chy12G220530 vs. ExPASy TrEMBL
Match: A0A1S3C3D9 (transcription factor TCP18-like OS=Cucumis melo OX=3656 GN=LOC103496407 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 8.3e-85
Identity = 172/181 (95.03%), Postives = 175/181 (96.69%), Query Frame = 0


Query: 179 ISNSSSNYSNSSELDNEVGVIIGDQNLNTKDNNIKISKKKIKKKKIMRAKQLPIRKTMAK 238
           ISNSSSNYSNSSELDNE GVIIGDQNLNTKDNNIKI+KKKIKKKKIMRAKQLPIRKTMAK
Sbjct: 2   ISNSSSNYSNSSELDNEAGVIIGDQNLNTKDNNIKINKKKIKKKKIMRAKQLPIRKTMAK 61

Query: 239 ELREKARERARARTLEKLKSQMFIRDSACCSDDHQPNFTNINSSSSWSSPFETTGGEESA 298
           ELREKARERARARTLEK K+Q+FIRDSACCS DHQPNFTNINSSSSWSSPFETTGGEESA
Sbjct: 62  ELREKARERARARTLEKQKNQLFIRDSACCSYDHQPNFTNINSSSSWSSPFETTGGEESA 121

Query: 299 GTTTHQSYNNNNHPITSQFDSQFHQIFSSFDVILPKWSPSDDSTFNFLHQQHEFEDSDIF 358
           G TTHQSYNNNNHPITSQFDSQFHQ FSSFD ILPKWSPSDDSTFNFLHQQHEFEDSDIF
Sbjct: 122 G-TTHQSYNNNNHPITSQFDSQFHQNFSSFDAILPKWSPSDDSTFNFLHQQHEFEDSDIF 181

Query: 359 G 360
           G
Sbjct: 182 G 181

[Close]

BLAST of Chy12G220530 vs. ExPASy TrEMBL
Match: A0A6J1E7Y5 (transcription factor TCP18-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431477 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.0e-62
Identity = 187/362 (51.66%), Postives = 233/362 (64.36%), Query Frame = 0


Query: 1   MFFSTNSSGTTKNVHDPFGNLSHDLDHSFHLPISFFPFPSPFEVD---DDRDLNFTTNSP 60
           MFFST +     + HD      HD DHSFHLPISFFPFPSPFEVD   DD+  NFTTNS 
Sbjct: 1   MFFSTKND----DDHD------HDHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQ 60

Query: 61  PNSSQNYNNNPPPIISTCNSPPIDNMSMVMMNSDQKMKKTMKKVPQRKRLSKKDRHSKIT 120
            N +     +P  I+++       N  + + NSDQK      K+P RKRLSKKDRHSKIT
Sbjct: 61  KNFT---IPSPDNIVAS-------NKKVGIGNSDQK----KLKIP-RKRLSKKDRHSKIT 120

Query: 121 TAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLAREKKNHNCF 180
           TA+G+RDRRMRLSLPVA+QFFGLQD+LGVDKGSKTVEWLL QA PEILKLA+++   +  
Sbjct: 121 TARGLRDRRMRLSLPVARQFFGLQDLLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHII 180

Query: 181 TISNSSSNYSNSSELDNEVGVIIGDQNLNTKDNNIKISKKKIKKKKIMRAKQLPIRKTMA 240
           T +  S++ S+ +++ + +  + G      K N+  + +K+ K+           R+TM 
Sbjct: 181 TTTVCSNSNSSEADMVSGIDEVGGGGGGPKKMNSCSLKRKRDKQP----------RRTMC 240

Query: 241 KELREKARERARARTLEKLKSQMFIRDSACCSDDHQPNFTNINSSSSWSSPFETTGGEES 300
           KELR+KARERARART+EK K+Q+F +D   CSD H PN   I SS SWSSPFET  GEES
Sbjct: 241 KELRQKARERARARTMEK-KNQIF-KD---CSDHHHPNHNKI-SSCSWSSPFETC-GEES 300

Query: 301 AGTTTHQSYNNNNHPITSQFDSQFHQIFSSFDVILPKWSPSDDSTFNFLHQQHEFEDSDI 360
            GT    SYN N         S   +   SF+ I+ KWSPS  S+ NFL  QHEFED+D+
Sbjct: 301 GGT---HSYNFN--------PSMEVENLCSFE-IMTKWSPS-ISSLNFLQPQHEFEDTDM 307

[Close]

BLAST of Chy12G220530 vs. ExPASy TrEMBL
Match: A0A6J1E7D2 (transcription factor TCP18-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431477 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 4.9e-61
Identity = 187/362 (51.66%), Postives = 233/362 (64.36%), Query Frame = 0


Query: 1   MFFSTNSSGTTKNVHDPFGNLSHDLDHSFHLPISFFPFPSPFEVD---DDRDLNFTTNSP 60
           MFFST +     + HD      HD DHSFHLPISFFPFPSPFEVD   DD+  NFTTNS 
Sbjct: 1   MFFSTKND----DDHD------HDHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQ 60

Query: 61  PNSSQNYNNNPPPIISTCNSPPIDNMSMVMMNSDQKMKKTMKKVPQRKRLSKKDRHSKIT 120
            N +     +P  I+++       N  + + NSDQK      K+P RKRLSKKDRHSKIT
Sbjct: 61  KNFT---IPSPDNIVAS-------NKKVGIGNSDQK----KLKIP-RKRLSKKDRHSKIT 120

Query: 121 TAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLAREKKNHNCF 180
           TA+G+RDRRMRLSLPVA+QFFGLQD+LGVDKGSKTVEWLL QA PEILKLA+++   +  
Sbjct: 121 TARGLRDRRMRLSLPVARQFFGLQDLLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHII 180

Query: 181 TISNSSSNYSNSSELDNEVGVIIGDQNLNTKDNNIKISKKKIKKKKIMRAKQLPIRKTMA 240
           T +  S++ S+ +++ + +  + G      K N+  + +K+ K+           R+TM 
Sbjct: 181 TTTVCSNSNSSEADMVSGIDEVGGGGGGPKKMNSCSLKRKRDKQP----------RRTMC 240

Query: 241 KELREKARERARARTLEKLKSQMFIRDSACCSDDHQPNFTNINSSSSWSSPFETTGGEES 300
           KELR+KARERARART+EK K+Q+F +D   CSD H PN   I SS SWSSPFET  GEES
Sbjct: 241 KELRQKARERARARTMEK-KNQIF-KD---CSDHHHPNHNKI-SSCSWSSPFETC-GEES 300

Query: 301 AGTTTHQSYNNNNHPITSQFDSQFHQIFSSFDVILPKWSPSDDSTFNFLHQQHEFEDSDI 360
            GT    SYN N         S   +   SF+ I+ KWSPS  S+ NFL Q HEFED+D+
Sbjct: 301 GGT---HSYNFN--------PSMEVENLCSFE-IMTKWSPS-ISSLNFL-QPHEFEDTDM 306

[Close]

BLAST of Chy12G220530 vs. ExPASy TrEMBL
Match: A0A6J1KJS3 (transcription factor TCP18-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495251 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.1e-60
Identity = 187/364 (51.37%), Postives = 225/364 (61.81%), Query Frame = 0


Query: 1   MFFSTNSSGTTKNVHDPFGNLSHDLDHSFHLPISFFPFPSPFEVD---DDRDLNFTTNSP 60
           MFFST +                D DHSFHLPISFFPFPSPFEVD   DD+  NFTTN  
Sbjct: 1   MFFSTKN--------------DDDHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTN-- 60

Query: 61  PNSSQNYNNNPPPIISTCNSPPIDNMSMVMMNSDQKMKKTMKKVPQRKRLSKKDRHSKIT 120
              S+     P P     ++    N +M + NSDQK      K+P RKRLSKKDRHSKIT
Sbjct: 61  ---SERIFTTPSP-----DNVLASNNNMGIGNSDQK----KLKIP-RKRLSKKDRHSKIT 120

Query: 121 TAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLAREKKNHNCF 180
           TA+G+RDRRMRLSLPVA+QFFGLQD+LGVDKGSKTVEWLL QA PEILKLA+++   +  
Sbjct: 121 TARGLRDRRMRLSLPVARQFFGLQDLLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHII 180

Query: 181 TISNSSSNYSNSSELDNEVGVIIGDQNLNTKDNNIKISKKKIKKKKIMRAKQLPIRKTMA 240
           T +  S++ SNS+   +E  ++ G   +           KKI    + R +    RKTM 
Sbjct: 181 TTTVCSNSNSNSNSNSSEADMVSGIDEVGGG------GPKKINSCSLKRKRDKQPRKTMC 240

Query: 241 KELREKARERARARTLEKLKSQMFIRDSACCSD--DHQPNFTNINSSSSWSSPFETTGGE 300
           KELR+KARERARART+EK K+Q+F +D   CSD   H PN   I SS SWSSPFE TGGE
Sbjct: 241 KELRQKARERARARTMEK-KNQIF-KD---CSDHHHHHPNHNKI-SSCSWSSPFE-TGGE 300

Query: 301 ESAGTTTHQSYNNNNHPITSQFDSQFHQIFSSFDVILPKWSPSDDSTFNFLHQQHEFEDS 360
           ES  T    SYN N         +   +   SF+ I+ KWSPS  S+ NFL  QHEFED+
Sbjct: 301 ESGAT---HSYNFN--------PAMEDENLCSFE-IMTKWSPS-ISSLNFLQPQHEFEDT 309

[Close]

BLAST of Chy12G220530 vs. NCBI nr
Match: XP_011650456.1 (transcription factor TCP18 [Cucumis sativus])

HSP 1 Score: 679 bits (1753), Expect = 8.80e-246
Identity = 353/359 (98.33%), Postives = 355/359 (98.89%), Query Frame = 0


Query: 1   MFFSTNSSGTTKNVHDPFGNLSHDLDHSFHLPISFFPFPSPFEVDDDRDLNFTTNSPPNS 60
           MFFSTNSSG TKNVHDPFGNLSHDLDHSFHLPISFFPFPSPFEVDDDRDLNFTTNSP NS
Sbjct: 1   MFFSTNSSGNTKNVHDPFGNLSHDLDHSFHLPISFFPFPSPFEVDDDRDLNFTTNSPSNS 60

Query: 61  SQNYNNNPPPIISTCNSPPIDNMSMVMMNSDQKMKKTMKKVPQRKRLSKKDRHSKITTAK 120
           SQNYNNNPPPIISTCNSPPIDNMSMV+MNSDQKMKK MKKVPQRKRLSKKDRHSKITTAK
Sbjct: 61  SQNYNNNPPPIISTCNSPPIDNMSMVVMNSDQKMKKMMKKVPQRKRLSKKDRHSKITTAK 120

Query: 121 GVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLAREKKNHNCFTIS 180
           GVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLA EKKNHNCFTIS
Sbjct: 121 GVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLATEKKNHNCFTIS 180

Query: 181 NSSSNYSNSSELDNEVGVIIGDQNLNTKDNNIKISKKKIKKKKIMRAKQLPIRKTMAKEL 240
           NSSSNYSNSSELDNEVGVIIGDQNLNTKDNNIKISKKKIKKKKIMRAKQLPIRKTMAKEL
Sbjct: 181 NSSSNYSNSSELDNEVGVIIGDQNLNTKDNNIKISKKKIKKKKIMRAKQLPIRKTMAKEL 240

Query: 241 REKARERARARTLEKLKSQMFIRDSACCSDDHQPNFTNINSSSSWSSPFETTGGEESAGT 300
           REKARERARARTLEKLKSQMFIRDSACCSDDHQPNFTNINSSSSWSSPFETTGGEESAGT
Sbjct: 241 REKARERARARTLEKLKSQMFIRDSACCSDDHQPNFTNINSSSSWSSPFETTGGEESAGT 300

Query: 301 TTHQSYNNNNHPITSQFDSQFHQIFSSFDVILPKWSPSDDSTFNFLHQQHEFEDSDIFG 359
           TTHQSYNNNN+PITSQFDSQFHQIFSSFDVILPKWSPSDDSTFNFLHQQHEFEDSDIFG
Sbjct: 301 TTHQSYNNNNNPITSQFDSQFHQIFSSFDVILPKWSPSDDSTFNFLHQQHEFEDSDIFG 359

[Close]

BLAST of Chy12G220530 vs. NCBI nr
Match: XP_038895175.1 (transcription factor TCP18-like [Benincasa hispida])

HSP 1 Score: 440 bits (1131), Expect = 4.18e-151
Identity = 280/382 (73.30%), Postives = 305/382 (79.84%), Query Frame = 0


Query: 1   MFFSTNSSGTTKNVHDPFGNLSHDLDHSFHLPISFFPFPSPFEV-DDDRD-------LNF 60
           MFFSTNSS  TKN HDPF +L H +DHSFHLPISFFPFPSPFEV D++ D       LNF
Sbjct: 1   MFFSTNSSSNTKNGHDPFCSLPH-IDHSFHLPISFFPFPSPFEVIDEEYDHHHHQDFLNF 60

Query: 61  TTNSPPNSSQNYNNNPPPIISTCNSPPIDNMSMVMMNSDQKMKKTMKKVPQRKRLSKKDR 120
             NS  +SSQN N   PPIIST N+ P  +  +  +++ +KMKK    +P RKRLSKKDR
Sbjct: 61  NNNSS-SSSQNIN---PPIISTNNNTPSLDKILPTISAQKKMKK----IPPRKRLSKKDR 120

Query: 121 HSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLAREKK 180
           HSKITTA+GVRDRRMRLSLPVAKQFFGLQD+LGVDKGSKTVEWLLIQAKPEILKLAREK 
Sbjct: 121 HSKITTARGVRDRRMRLSLPVAKQFFGLQDLLGVDKGSKTVEWLLIQAKPEILKLAREK- 180

Query: 181 NHNCFTISNSSSN-----YSNSSELDNEVGVIIGDQNLNTKDNNIKISKKKIKKKKIMRA 240
           NH  F +SN+SS+     YSNSSELDNEVGVIIGDQNLNTKDNNIKI KKK   K ++RA
Sbjct: 181 NH--FLMSNNSSSNYYSAYSNSSELDNEVGVIIGDQNLNTKDNNIKIKKKK---KMMIRA 240

Query: 241 KQLPIRKTMAKELREKARERARARTLEKLKSQMFIRDSACCSDDHQPNFTNINSSSSWSS 300
           KQLP RK MAKELREKARERARARTLEK K+Q+FIRDS  CSD H PNFT I SSSSWSS
Sbjct: 241 KQLP-RKAMAKELREKARERARARTLEK-KNQIFIRDS--CSD-HHPNFTKIISSSSWSS 300

Query: 301 PFETTGG-EESAGTTTHQSYNNNN--------HPIT-SQFDSQFHQIFSSFDVILPKWSP 359
           PFETTGG EESAGT   QSYNN+N         PIT SQFD QFHQ FSSFD+ILPKWSP
Sbjct: 301 PFETTGGGEESAGT---QSYNNHNLNLAIEVEKPITNSQFDYQFHQNFSSFDIILPKWSP 359

[Close]

BLAST of Chy12G220530 vs. NCBI nr
Match: XP_008456501.1 (PREDICTED: transcription factor TCP18-like [Cucumis melo])

HSP 1 Score: 322 bits (824), Expect = 3.39e-107
Identity = 172/181 (95.03%), Postives = 175/181 (96.69%), Query Frame = 0


Query: 179 ISNSSSNYSNSSELDNEVGVIIGDQNLNTKDNNIKISKKKIKKKKIMRAKQLPIRKTMAK 238
           ISNSSSNYSNSSELDNE GVIIGDQNLNTKDNNIKI+KKKIKKKKIMRAKQLPIRKTMAK
Sbjct: 2   ISNSSSNYSNSSELDNEAGVIIGDQNLNTKDNNIKINKKKIKKKKIMRAKQLPIRKTMAK 61

Query: 239 ELREKARERARARTLEKLKSQMFIRDSACCSDDHQPNFTNINSSSSWSSPFETTGGEESA 298
           ELREKARERARARTLEK K+Q+FIRDSACCS DHQPNFTNINSSSSWSSPFETTGGEESA
Sbjct: 62  ELREKARERARARTLEKQKNQLFIRDSACCSYDHQPNFTNINSSSSWSSPFETTGGEESA 121

Query: 299 GTTTHQSYNNNNHPITSQFDSQFHQIFSSFDVILPKWSPSDDSTFNFLHQQHEFEDSDIF 358
           GTT HQSYNNNNHPITSQFDSQFHQ FSSFD ILPKWSPSDDSTFNFLHQQHEFEDSDIF
Sbjct: 122 GTT-HQSYNNNNHPITSQFDSQFHQNFSSFDAILPKWSPSDDSTFNFLHQQHEFEDSDIF 181

[Close]

BLAST of Chy12G220530 vs. NCBI nr
Match: XP_022923891.1 (transcription factor TCP18-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 249 bits (636), Expect = 6.33e-77
Identity = 191/364 (52.47%), Postives = 230/364 (63.19%), Query Frame = 0


Query: 1   MFFSTNSSGTTKNVHDPFGNLSHDLDHSFHLPISFFPFPSPFEVD---DDRDLNFTTNSP 60
           MFFST +       HD      HD DHSFHLPISFFPFPSPFEVD   DD+  NFTTNS 
Sbjct: 1   MFFSTKNDDD----HD------HDHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQ 60

Query: 61  PNSSQNYNNNPPPIISTCNSPPIDNMSMVMMNSDQKMKKTMKKVPQRKRLSKKDRHSKIT 120
            N +          I + ++    N  + + NSDQK  K    +P RKRLSKKDRHSKIT
Sbjct: 61  KNFT----------IPSPDNIVASNKKVGIGNSDQKKLK----IP-RKRLSKKDRHSKIT 120

Query: 121 TAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLAREKKNHNCF 180
           TA+G+RDRRMRLSLPVA+QFFGLQD+LGVDKGSKTVEWLL QA PEILKLA+++   +  
Sbjct: 121 TARGLRDRRMRLSLPVARQFFGLQDLLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHII 180

Query: 181 TISNSSSNYSNSSELDNEVGV--IIGDQNLNTKDNNIKISKKKIKKKKIMRAKQLPIRKT 240
           T +  S+  SNSSE D   G+  + G      K N+  + +K+ K+           R+T
Sbjct: 181 TTTVCSN--SNSSEADMVSGIDEVGGGGGGPKKMNSCSLKRKRDKQP----------RRT 240

Query: 241 MAKELREKARERARARTLEKLKSQMFIRDSACCSDDHQPNFTNINSSSSWSSPFETTGGE 300
           M KELR+KARERARART+EK K+Q+F +D   CSD H PN   I SS SWSSPFET G E
Sbjct: 241 MCKELRQKARERARARTMEK-KNQIF-KD---CSDHHHPNHNKI-SSCSWSSPFETCG-E 300

Query: 301 ESAGTTTHQSYNNNNHPITSQFDSQFHQIFSSFDVILPKWSPSDDSTFNFLHQQHEFEDS 359
           ES GT    SYN N         S   +   SF++ + KWSPS  S+ NFL  QHEFED+
Sbjct: 301 ESGGT---HSYNFN--------PSMEVENLCSFEI-MTKWSPS-ISSLNFLQPQHEFEDT 307

[Close]

BLAST of Chy12G220530 vs. NCBI nr
Match: KAG6584372.1 (Transcription factor TCP18, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019957.1 Transcription factor TCP18 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 249 bits (635), Expect = 8.41e-77
Identity = 193/364 (53.02%), Postives = 229/364 (62.91%), Query Frame = 0


Query: 1   MFFSTNSSGTTKNVHDPFGNLSHDLDHSFHLPISFFPFPSPFEVD---DDRDLNFTTNSP 60
           MFFST      KN  D       D DHSFHLPISFFPFPSPFEVD   DD+  NFTTNS 
Sbjct: 1   MFFST------KNDDDD------DHDHSFHLPISFFPFPSPFEVDEQYDDQLHNFTTNSQ 60

Query: 61  PNSSQNYNNNPPPIISTCNSPPIDNMSMVMMNSDQKMKKTMKKVPQRKRLSKKDRHSKIT 120
            N +          I + ++    N  M + NSDQK  K    +P RKRLSKKDRHSKIT
Sbjct: 61  KNFT----------IPSPDNIVASNKKMGIGNSDQKKLK----IP-RKRLSKKDRHSKIT 120

Query: 121 TAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLAREKKNHNCF 180
           TA+G+RDRRMRLSLPVA+QFFGLQD+LGVDKGSKTVEWLL QA PEILKLA+++   +  
Sbjct: 121 TARGLRDRRMRLSLPVARQFFGLQDLLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHII 180

Query: 181 TISNSSSNYSNSSELDNEVGV--IIGDQNLNTKDNNIKISKKKIKKKKIMRAKQLPIRKT 240
           T +  S+  SNSSE D   G+  + G      K N+  + +K+ K+           R+T
Sbjct: 181 TTTVCSN--SNSSEADMVSGIDEVGGGGGGPKKMNSCSLKRKRDKQP----------RRT 240

Query: 241 MAKELREKARERARARTLEKLKSQMFIRDSACCSDDHQPNFTNINSSSSWSSPFETTGGE 300
           M KELR+KARERARART+EK K+Q+F +D   CSD H PN   I SS SWSSPFET G E
Sbjct: 241 MCKELRQKARERARARTMEK-KNQIF-KD---CSDHHHPNHNKI-SSCSWSSPFETCG-E 300

Query: 301 ESAGTTTHQSYNNNNHPITSQFDSQFHQIFSSFDVILPKWSPSDDSTFNFLHQQHEFEDS 359
           ES GT    SYN N         S   +   SF++ + KWSPS  S+ NFL  QHEFED+
Sbjct: 301 ESGGT---HSYNFN--------PSMEVENLCSFEI-MTKWSPS-ISSLNFLQPQHEFEDT 305

[Close]

BLAST of Chy12G220530 vs. TAIR 10
Match: AT3G18550.2 (TCP family transcription factor )

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-27
Identity = 130/386 (33.68%), Postives = 181/386 (46.89%), Query Frame = 0


Query: 3   FSTNSSGTTKNVHDPFGNLSHDLD--HSFHLPISFFPFPSPFEVDDDRDLNFTTNSPPNS 62
           FS +SS     +H      ++ LD  H F  P  F    S FE   D  L  T+  P N+
Sbjct: 33  FSPSSSINDILIHSTSNTSNNHLDHHHQFQQPSPF----SHFEFAPDCAL-LTSFHPENN 92

Query: 63  SQNYNNNPP----------PIISTCNSPPIDNMSMVMMNSDQKMKKTMK--KVPQRKRLS 122
             + N   P          P+ +T    P +    + +  D +   T +  K+ + K+ S
Sbjct: 93  GHDDNQTIPNDNHHPSLHFPLNNTIVEQPTEPSETINLIEDSQRISTSQDPKMKKAKKPS 152

Query: 123 KKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLA 182
           + DRHSKI TAKG RDRRMRLSL VAK+ FGLQDMLG DK SKTVEWLL QAKPEI+K+A
Sbjct: 153 RTDRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTVEWLLTQAKPEIIKIA 212

Query: 183 REKKNHNCFTISNSS--SNYSNSSELDNEVGV-IIGDQNLNTKDNNI---KISKKKIKKK 242
               +H CF+  + S   +   SS+L     +  + D+  NT        K+  + ++ K
Sbjct: 213 TTLSHHGCFSSGDESHIRSMDTSSDLCELASMWTVDDRGSNTNTTETRGNKVDGRSMRGK 272

Query: 243 KIMRAKQLPIRKTMAKELREKARERARARTLEKLKSQMFIRDSAC-----CSDDHQPNFT 302
           +     + PI K ++KE R KARERA+ RT+EK+  +M  R          + DH     
Sbjct: 273 RKRPEPRTPILKKLSKEERAKARERAKGRTMEKMMMKMKGRSQLVKVVEEDAHDHGEIIK 332

Query: 303 NINSSSSWSSPFETTGGEESA---------GTTTHQSYNNNNHPITSQFDSQFHQIFSSF 355
           N N S    S FE T  E+                   N  +H     +D   ++  SSF
Sbjct: 333 NNNRSQVNRSSFEMTHCEDKIEELCKNDRFAVCNEFIMNKKDHISNESYDLVNYKPNSSF 392

[Close]

BLAST of Chy12G220530 vs. TAIR 10
Match: AT3G18550.1 (TCP family transcription factor )

HSP 1 Score: 120.6 bits (301), Expect = 2.7e-27
Identity = 130/390 (33.33%), Postives = 181/390 (46.41%), Query Frame = 0


Query: 3   FSTNSSGTTKNVHDPFGNLSHDLD--HSFHLPISFFPFPSPFEVDDDRDLNFTTNSPPNS 62
           FS +SS     +H      ++ LD  H F  P  F    S FE   D  L  T+  P N+
Sbjct: 33  FSPSSSINDILIHSTSNTSNNHLDHHHQFQQPSPF----SHFEFAPDCAL-LTSFHPENN 92

Query: 63  SQNYNNNPP----------PIISTCNSPPIDNMSMVMMNSDQKMKKTMK--KVPQRKRLS 122
             + N   P          P+ +T    P +    + +  D +   T +  K+ + K+ S
Sbjct: 93  GHDDNQTIPNDNHHPSLHFPLNNTIVEQPTEPSETINLIEDSQRISTSQDPKMKKAKKPS 152

Query: 123 KKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLA 182
           + DRHSKI TAKG RDRRMRLSL VAK+ FGLQDMLG DK SKTVEWLL QAKPEI+K+A
Sbjct: 153 RTDRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTVEWLLTQAKPEIIKIA 212

Query: 183 REKKNHNCFTISNSS------SNYSNSSELDNEVGV-IIGDQNLNTKDNNI---KISKKK 242
               +H CF+  + S       +   SS+L     +  + D+  NT        K+  + 
Sbjct: 213 TTLSHHGCFSSGDESHIRPVLGSMDTSSDLCELASMWTVDDRGSNTNTTETRGNKVDGRS 272

Query: 243 IKKKKIMRAKQLPIRKTMAKELREKARERARARTLEKLKSQMFIRDSAC-----CSDDHQ 302
           ++ K+     + PI K ++KE R KARERA+ RT+EK+  +M  R          + DH 
Sbjct: 273 MRGKRKRPEPRTPILKKLSKEERAKARERAKGRTMEKMMMKMKGRSQLVKVVEEDAHDHG 332

Query: 303 PNFTNINSSSSWSSPFETTGGEESA---------GTTTHQSYNNNNHPITSQFDSQFHQI 355
               N N S    S FE T  E+                   N  +H     +D   ++ 
Sbjct: 333 EIIKNNNRSQVNRSSFEMTHCEDKIEELCKNDRFAVCNEFIMNKKDHISNESYDLVNYKP 392

[Close]

BLAST of Chy12G220530 vs. TAIR 10
Match: AT1G68800.1 (TCP domain protein 12 )

HSP 1 Score: 89.7 bits (221), Expect = 5.1e-18
Identity = 68/177 (38.42%), Postives = 97/177 (54.80%), Query Frame = 0


Query: 97  TMKKVPQRKRLSKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWL 156
           T ++V  R+ + K+DRHSKI TA+G RDRRMRLSL +A++FF LQDMLG DK SKT+EWL
Sbjct: 100 TSQEVQWRRTVKKRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWL 159

Query: 157 LIQAKPEILKLAREKKNHNCFTISNSSSNYSNSSELDNEVGVIIGDQNLNTKDNNIKISK 216
             ++K  I +L            ++         ++D +            KD  +K+  
Sbjct: 160 FSKSKTSIKQLKER-------VAASEGGGKDEHLQVDEK-----------EKDETLKLRV 219

Query: 217 KKIKKKKIMRAKQLPIRKTMAKELREKARERARARTLEKLKSQMFIRDSACCSDDHQ 274
            K ++ K M +          KE RE+AR+RAR RT+ K+K ++F   S   SD HQ
Sbjct: 220 SK-RRTKTMES------SFKTKESRERARKRARERTMAKMKMRLF-ETSETISDPHQ 250

[Close]

BLAST of Chy12G220530 vs. TAIR 10
Match: AT4G18390.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 )

HSP 1 Score: 80.5 bits (197), Expect = 3.1e-15
Identity = 75/229 (32.75%), Postives = 108/229 (47.16%), Query Frame = 0


Query: 110 KDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLAR 169
           KDRHSK+ T+KG RDRR+RLS+  A QF+ LQD LG D+ SK VEWL+  A+  I +L  
Sbjct: 43  KDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIKAAEDSISELPS 102

Query: 170 EKKNHNCFTISNSSSNYSNSSELDNEVGVIIGDQNLNTKDNNIKISKKKIKKKKIMRAKQ 229
               H   T   +  N + ++   N +       N +T  N+  +S  +           
Sbjct: 103 LNNTH-FPTDDENHQNQTLTTVAANSLSKSACSSNSDTSKNSSGLSLSR----------- 162

Query: 230 LPIRKTMAKELREKARERARARTLEKLKSQMFIRDSACCSDDHQPNFTN--------INS 289
                    ELR+KARERAR RT ++ K +          D +  +FT+        +NS
Sbjct: 163 --------SELRDKARERARERTAKETKER----------DHNHTSFTDLLNSGSDPVNS 222

Query: 290 SSSW------SSPFE--TTGGEESAGTTTHQSYNNNNHPITSQFDSQFH 323
           +  W      SSP E  ++G    +G  TH   + N+HP +S  D   H
Sbjct: 223 NRQWMASAPSSSPMEYFSSGLILGSGQQTHFPISTNSHPFSSISDHHHH 241

[Close]

BLAST of Chy12G220530 vs. TAIR 10
Match: AT4G18390.2 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 )

HSP 1 Score: 80.5 bits (197), Expect = 3.1e-15
Identity = 75/229 (32.75%), Postives = 108/229 (47.16%), Query Frame = 0


Query: 110 KDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLAR 169
           KDRHSK+ T+KG RDRR+RLS+  A QF+ LQD LG D+ SK VEWL+  A+  I +L  
Sbjct: 43  KDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIKAAEDSISELPS 102

Query: 170 EKKNHNCFTISNSSSNYSNSSELDNEVGVIIGDQNLNTKDNNIKISKKKIKKKKIMRAKQ 229
               H   T   +  N + ++   N +       N +T  N+  +S  +           
Sbjct: 103 LNNTH-FPTDDENHQNQTLTTVAANSLSKSACSSNSDTSKNSSGLSLSR----------- 162

Query: 230 LPIRKTMAKELREKARERARARTLEKLKSQMFIRDSACCSDDHQPNFTN--------INS 289
                    ELR+KARERAR RT ++ K +          D +  +FT+        +NS
Sbjct: 163 --------SELRDKARERARERTAKETKER----------DHNHTSFTDLLNSGSDPVNS 222

Query: 290 SSSW------SSPFE--TTGGEESAGTTTHQSYNNNNHPITSQFDSQFH 323
           +  W      SSP E  ++G    +G  TH   + N+HP +S  D   H
Sbjct: 223 NRQWMASAPSSSPMEYFSSGLILGSGQQTHFPISTNSHPFSSISDHHHH 241

The following BLAST results are available for this feature:

BLAST of Chy12G220530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A1YKT1	3.8e-26	33.33	Transcription factor TCP18 OS=Arabidopsis thaliana OX=3702 GN=TCP18 PE=1 SV=1	[more]
Q93WI2	7.1e-17	38.54	Transcription factor TEOSINTE BRANCHED 1 OS=Zea mays OX=4577 GN=TB1 PE=2 SV=2	[more]
A0AQW4	7.1e-17	38.42	Transcription factor TCP12 OS=Arabidopsis thaliana OX=3702 GN=TCP12 PE=2 SV=1	[more]
O49250	3.9e-15	37.70	Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1	[more]
Q9SBV6	2.1e-13	32.82	Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum linkianum OX=102601 GN=...	[more]

BLAST of Chy12G220530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVQ1	1.6e-192	98.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042180 PE=4 SV=1	[more]
A0A1S3C3D9	8.3e-85	95.03	transcription factor TCP18-like OS=Cucumis melo OX=3656 GN=LOC103496407 PE=4 SV=...	[more]
A0A6J1E7Y5	2.0e-62	51.66	transcription factor TCP18-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1E7D2	4.9e-61	51.66	transcription factor TCP18-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1KJS3	1.1e-60	51.37	transcription factor TCP18-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Chy12G220530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650456.1	8.80e-246	98.33	transcription factor TCP18 [Cucumis sativus]	[more]
XP_038895175.1	4.18e-151	73.30	transcription factor TCP18-like [Benincasa hispida]	[more]
XP_008456501.1	3.39e-107	95.03	PREDICTED: transcription factor TCP18-like [Cucumis melo]	[more]
XP_022923891.1	6.33e-77	52.47	transcription factor TCP18-like isoform X1 [Cucurbita moschata]	[more]
KAG6584372.1	8.41e-77	53.02	Transcription factor TCP18, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]

BLAST of Chy12G220530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18550.2	1.2e-27	33.68	TCP family transcription factor	[more]
AT3G18550.1	2.7e-27	33.33	TCP family transcription factor	[more]
AT1G68800.1	5.1e-18	38.42	TCP domain protein 12	[more]
AT4G18390.1	3.1e-15	32.75	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2	[more]
AT4G18390.2	3.1e-15	32.75	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 236..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..311
None	No IPR available	PANTHER	PTHR31072:SF156	TRANSCRIPTION FACTOR TCP18	coord: 11..320
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 108..257 e-value: 7.2E-40 score: 137.1
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 109..167 score: 31.406963
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 11..320
IPR017888	CYC/TB1, R domain	PROSITE	PS51370	R	coord: 238..255 score: 9.958933

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G220530.1	Chy12G220530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity