Chy12G220180 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G220180
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Rib s in 87 species: Archae - 0; Bacteria - 746; Metazoa - 33; Fungi - 46; Plants - 57; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
Location	chrH12: 18259402 .. 18260869 (+)
RNA-Seq Expression	Chy12G220180
Synteny	Chy12G220180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCGAGCTCTATGGGGAGCTGTCTTCAACGTCTGTTCTCGCACGCTTTCCGTTTCTCCTCCGCAACAAACCTTTCGTTCCCGCCCCTTACTGTCTCCATTTTCCGTTCTCACTTTGCGATGTTACTCATCCGGGAATGACAAGTACAATGAATTGAACTCAACCAAAAACAAGGACTCTCTCGTCGAAGATGATGTCAGCACCGAAGGTAAAGTAGTATTCAATTTGAAAATCATTTCTCAAATTTGGGCACTGTGGACTATACTCTCCAGGAATTTCTAAGCATGAGTCATCGCCTTCTATCATGTTATATTGTTATTGCTGATAATTGTGGGATTTCAAGTCCAGAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTTTCAAACTGTGTCTTCATTTCATGAGATGGTTCTTGTAATTTTACAGTTAGTCTGATAATTGCCATTTTTTTGCCTTACTTAAGATTATTGTACATTTTTTCCAGTTTAATTGTTTGAGTTCTTGAGTTGACTATAAAATGTTGGGTTTATATCCTCTTCTCACGTGTAGGTTGTTCAATTCTGGAAATTTTAGAGTAGATGTGTTAAGAAGCGTTTGTTGAAGAAAGTACTTTTAATCAAGGAACTTCCATTATAAGGAACGGGAAAAGTAGTGAAATGGAAGTTCATTTTGTTTGTTGGTTCTGTATATTAGAAGTTCTTTTAATTAAATTAGAGATATGTTTTGAATGAATATTTTGAGAAAGATGTGAGAATAATTAGAATTACAAAGCAATTAAGTGAGGAAAATAGAGATCAATGAGAGAAAGCAAAAGAGCTCAGAAAAATAGAAGGGAAATCTGGAAAAGTGAGTAGAAAGAGTTTAGTGCACAGAGATATTAAGAAAAAGGTGTTTACAGAGAAATGTTAGTGAAAGAGTTTGTATTTTGAGAAATGAAGAATAATGTATTTTAGTCAAAGATACTTGATAGAACATCTATGATCTACCATTCACTTGTTCAAAAAATACATGACTGATCTTAGTGAAATTAACCATTTAAATAGTACTTCTGTTAAAAGATTTGTAAAGTTCTTGTTATTTCTGGATCAATTTTTGGTTGTATGGTTAATTTTTGTTTTTGAGCTTCTTCATTTGGTGTTCCTTTTCTGGAATCTTACACTTATGATTTAGGAGCTAATACAGAAATGATTTTTATCTGTGAATTCAGAGCTGAAGAGGAAAATTGATAAATTTTATGAGGGTGGTGATACCGATTCGTTACCAGCAATTTTCGAAGCAATATTGAAAAGGAAGCTATCGGGTAAACACGAAGATGCTGATGATGAGCTGATGAAAGAAATTCGACAGCAATTGCCCGGAGAAGTTGAAGATTTTAATGGTGAAGAAGAATATGATTCAGATTTAATGGACGATGATTCCAGTGATGCCAGTGATTCTGAGGAAGAAGATAGAAGAATATAA

mRNA sequence

ATGAAGCGAGCTCTATGGGGAGCTGTCTTCAACGTCTGTTCTCGCACGCTTTCCGTTTCTCCTCCGCAACAAACCTTTCGTTCCCGCCCCTTACTGTCTCCATTTTCCGTTCTCACTTTGCGATGTTACTCATCCGGGAATGACAAGTACAATGAATTGAACTCAACCAAAAACAAGGACTCTCTCGTCGAAGATGATGTCAGCACCGAAGAGCTGAAGAGGAAAATTGATAAATTTTATGAGGGTGGTGATACCGATTCGTTACCAGCAATTTTCGAAGCAATATTGAAAAGGAAGCTATCGGGTAAACACGAAGATGCTGATGATGAGCTGATGAAAGAAATTCGACAGCAATTGCCCGGAGAAGTTGAAGATTTTAATGGTGAAGAAGAATATGATTCAGATTTAATGGACGATGATTCCAGTGATGCCAGTGATTCTGAGGAAGAAGATAGAAGAATATAA

Coding sequence (CDS)

ATGAAGCGAGCTCTATGGGGAGCTGTCTTCAACGTCTGTTCTCGCACGCTTTCCGTTTCTCCTCCGCAACAAACCTTTCGTTCCCGCCCCTTACTGTCTCCATTTTCCGTTCTCACTTTGCGATGTTACTCATCCGGGAATGACAAGTACAATGAATTGAACTCAACCAAAAACAAGGACTCTCTCGTCGAAGATGATGTCAGCACCGAAGAGCTGAAGAGGAAAATTGATAAATTTTATGAGGGTGGTGATACCGATTCGTTACCAGCAATTTTCGAAGCAATATTGAAAAGGAAGCTATCGGGTAAACACGAAGATGCTGATGATGAGCTGATGAAAGAAATTCGACAGCAATTGCCCGGAGAAGTTGAAGATTTTAATGGTGAAGAAGAATATGATTCAGATTTAATGGACGATGATTCCAGTGATGCCAGTGATTCTGAGGAAGAAGATAGAAGAATATAA

Protein sequence

MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTLRCYSSGNDKYNELNSTKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEEDRRI*

Homology

[Close]

BLAST of Chy12G220180 vs. ExPASy TrEMBL
Match: A0A0A0LT17 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042590 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.3e-68
Identity = 144/155 (92.90%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTLRCYSSGNDKYNELNSTKNKD 60
           MKRALWGAVF+V S TLSVSPP +TFRSRPLLSPFSV TLR YSSGNDKYNELNSTKNKD
Sbjct: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60

Query: 61  SLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SLV+DDVSTEELKRKIDKFYEGGD DSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP
Sbjct: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120

Query: 121 GEVEDFNGEEEYDSDLMDDDSSDAS-DSEEEDRRI 155
           GEVEDF GEEEYDSDLMDDDSSDAS DSEEEDRRI
Sbjct: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 155

[Close]

BLAST of Chy12G220180 vs. ExPASy TrEMBL
Match: A0A5D3BIA4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002170 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.6e-64
Identity = 135/154 (87.66%), Postives = 142/154 (92.21%), Query Frame = 0


Query: 1   MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTLRCYSSGNDKYNELNSTKNKD 60
           MKRALWGAVFNVCSRTLSVSPP +TFRS PLLSPFSV TLRCYSSGNDKYNELNSTKNKD
Sbjct: 1   MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKNKD 60

Query: 61  SLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SLV+DDVSTEELKRKIDKFYEGGD DSLP IFEAILKRKLSGKHEDADDELMKEIRQ++P
Sbjct: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPEIFEAILKRKLSGKHEDADDELMKEIRQRMP 120

Query: 121 GEVEDFNGEEEYDSDLMDDDSSDASDSEEEDRRI 155
           GE+EDF G EEYDS+L DD    ASDSEEED+RI
Sbjct: 121 GEIEDFKG-EEYDSELTDD---AASDSEEEDKRI 150

[Close]

BLAST of Chy12G220180 vs. ExPASy TrEMBL
Match: A0A1S3CEX3 (uncharacterized protein LOC103499929 OS=Cucumis melo OX=3656 GN=LOC103499929 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.6e-64
Identity = 135/154 (87.66%), Postives = 142/154 (92.21%), Query Frame = 0


Query: 1   MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTLRCYSSGNDKYNELNSTKNKD 60
           MKRALWGAVFNVCSRTLSVSPP +TFRS PLLSPFSV TLRCYSSGNDKYNELNSTKNKD
Sbjct: 1   MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKNKD 60

Query: 61  SLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SLV+DDVSTEELKRKIDKFYEGGD DSLP IFEAILKRKLSGKHEDADDELMKEIRQ++P
Sbjct: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPEIFEAILKRKLSGKHEDADDELMKEIRQRMP 120

Query: 121 GEVEDFNGEEEYDSDLMDDDSSDASDSEEEDRRI 155
           GE+EDF G EEYDS+L DD    ASDSEEED+RI
Sbjct: 121 GEIEDFKG-EEYDSELTDD---AASDSEEEDKRI 150

[Close]

BLAST of Chy12G220180 vs. ExPASy TrEMBL
Match: A0A6J1E804 (uncharacterized protein LOC111431572 OS=Cucurbita moschata OX=3662 GN=LOC111431572 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.5e-46
Identity = 114/164 (69.51%), Postives = 126/164 (76.83%), Query Frame = 0


Query: 1   MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSV---LTLRCYSSGNDKYNELNST- 60
           MKRA+WGAVF  CSR +S+SP  QT RS PLL  FSV      RCYSSGNDKYN LNST 
Sbjct: 1   MKRAIWGAVFTACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTT 60

Query: 61  -KNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDELMKEI 120
            +NKDSLV+DDVS EELKRKID+FYE GD +SLP IFEAILKRKLSGKH DADDELMKEI
Sbjct: 61  IENKDSLVDDDVSNEELKRKIDRFYE-GDVESLPTIFEAILKRKLSGKHGDADDELMKEI 120

Query: 121 RQQLPGEVEDFNGEEEYDSDLM-----DDDSSDASDSEEEDRRI 155
           RQ++PGEVEDF  +EEYDSDL       D+      SEEEDRR+
Sbjct: 121 RQRVPGEVEDFK-DEEYDSDLSGELNESDEEMKEDSSEEEDRRV 162

[Close]

BLAST of Chy12G220180 vs. ExPASy TrEMBL
Match: A0A6J1KP40 (uncharacterized protein LOC111495236 OS=Cucurbita maxima OX=3661 GN=LOC111495236 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 8.9e-44
Identity = 111/162 (68.52%), Postives = 123/162 (75.93%), Query Frame = 0


Query: 1   MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSV---LTLRCYSSGNDKYNELNST- 60
           MKRA+WGAVF  CSR +S+ P  QT RS PLL PFSV      RCYSSGNDKYN LNST 
Sbjct: 1   MKRAIWGAVFAACSRRVSIPPLLQTLRSGPLLPPFSVSISSQSRCYSSGNDKYNGLNSTT 60

Query: 61  -KNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDELMKEI 120
            +NKDSLV+D VS EELKRKID+FYE GD +SLP IFEAILKRKLSGKH DADDELMKEI
Sbjct: 61  IENKDSLVDDYVSNEELKRKIDRFYE-GDVESLPTIFEAILKRKLSGKHGDADDELMKEI 120

Query: 121 RQQLPGEVEDFNGEEEYDSDLM-----DDDSSDASDSEEEDR 153
            Q++PGEVEDF  +EEYDSDL       D+  +   SEEEDR
Sbjct: 121 LQRMPGEVEDFK-DEEYDSDLSGDLNETDEEMEEDSSEEEDR 160

[Close]

BLAST of Chy12G220180 vs. NCBI nr
Match: XP_004137486.1 (uncharacterized protein LOC101216147 [Cucumis sativus] >KGN64149.1 hypothetical protein Csa_014199 [Cucumis sativus])

HSP 1 Score: 264 bits (674), Expect = 4.05e-88
Identity = 144/155 (92.90%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTLRCYSSGNDKYNELNSTKNKD 60
           MKRALWGAVF+V S TLSVSPP +TFRSRPLLSPFSV TLR YSSGNDKYNELNSTKNKD
Sbjct: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60

Query: 61  SLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SLV+DDVSTEELKRKIDKFYEGGD DSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP
Sbjct: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120

Query: 121 GEVEDFNGEEEYDSDLMDDDSSDASD-SEEEDRRI 154
           GEVEDF GEEEYDSDLMDDDSSDASD SEEEDRRI
Sbjct: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 155

[Close]

BLAST of Chy12G220180 vs. NCBI nr
Match: XP_008461340.1 (PREDICTED: uncharacterized protein LOC103499929 [Cucumis melo] >TYJ99013.1 uncharacterized protein E5676_scaffold248G002170 [Cucumis melo var. makuwa])

HSP 1 Score: 251 bits (641), Expect = 3.66e-83
Identity = 135/154 (87.66%), Postives = 142/154 (92.21%), Query Frame = 0


Query: 1   MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTLRCYSSGNDKYNELNSTKNKD 60
           MKRALWGAVFNVCSRTLSVSPP +TFRS PLLSPFSV TLRCYSSGNDKYNELNSTKNKD
Sbjct: 1   MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKNKD 60

Query: 61  SLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SLV+DDVSTEELKRKIDKFYEGGD DSLP IFEAILKRKLSGKHEDADDELMKEIRQ++P
Sbjct: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPEIFEAILKRKLSGKHEDADDELMKEIRQRMP 120

Query: 121 GEVEDFNGEEEYDSDLMDDDSSDASDSEEEDRRI 154
           GE+EDF GEE YDS+L DD    ASDSEEED+RI
Sbjct: 121 GEIEDFKGEE-YDSELTDDA---ASDSEEEDKRI 150

[Close]

BLAST of Chy12G220180 vs. NCBI nr
Match: XP_038894045.1 (uncharacterized protein LOC120082798 [Benincasa hispida])

HSP 1 Score: 211 bits (538), Expect = 2.50e-67
Identity = 122/162 (75.31%), Postives = 135/162 (83.33%), Query Frame = 0


Query: 1   MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTLRCYSSGNDKYNELNSTKNKD 60
           MKRAL GAVFNV SRTLSVSPP +TFRS  LLSPFS  +LR YSSGNDKYN LNSTKNKD
Sbjct: 1   MKRALLGAVFNVYSRTLSVSPPLRTFRSGLLLSPFSFFSLRYYSSGNDKYNGLNSTKNKD 60

Query: 61  SLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SL+EDDVSTEELKRKIDKFYEG D +SLP IFEAILKRKLSGKHED D E+MKEIRQ++P
Sbjct: 61  SLIEDDVSTEELKRKIDKFYEG-DVESLPTIFEAILKRKLSGKHEDDDHEMMKEIRQRMP 120

Query: 121 GEVEDFNGEEEYDSDLMD--------DDSSDASDSEEEDRRI 154
           G+VED  GEE YDSDL +        +D SD+SDSE+EDRR+
Sbjct: 121 GQVEDSTGEE-YDSDLSELNETAEEMEDFSDSSDSEDEDRRV 160

[Close]

BLAST of Chy12G220180 vs. NCBI nr
Match: XP_023519890.1 (uncharacterized protein LOC111783221 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195 bits (496), Expect = 6.56e-61
Identity = 115/164 (70.12%), Postives = 129/164 (78.66%), Query Frame = 0


Query: 1   MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTL---RCYSSGNDKYNELNST- 60
           MKRA+WGAVF VCSR +S+SP  QT RS PLL PFSV      RCYS+GNDKYN LNST 
Sbjct: 1   MKRAIWGAVFTVCSRRVSISPLLQTLRSGPLLPPFSVSIASQSRCYSTGNDKYNGLNSTT 60

Query: 61  -KNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDELMKEI 120
            +NKDSLV+DDVS EELKRKID+FYEG D +SLP IFEAILKRKLSGKH DADDELMKEI
Sbjct: 61  IENKDSLVDDDVSNEELKRKIDRFYEG-DVESLPTIFEAILKRKLSGKHGDADDELMKEI 120

Query: 121 RQQLPGEVEDFNGEEEYDSDLMD-----DDSSDASDSEEEDRRI 154
           RQ++PGEVEDF  +EEYDSDL       D+  +   SEEEDRR+
Sbjct: 121 RQRMPGEVEDFK-DEEYDSDLSGELNETDEEMEEDPSEEEDRRV 162

[Close]

BLAST of Chy12G220180 vs. NCBI nr
Match: KAG6584340.1 (hypothetical protein SDJN03_20272, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191 bits (486), Expect = 2.18e-59
Identity = 114/164 (69.51%), Postives = 127/164 (77.44%), Query Frame = 0


Query: 1   MKRALWGAVFNVCSRTLSVSPPQQTFRSRPLLSPFSVLTL---RCYSSGNDKYNELNST- 60
           MKRA+WGAVF  CSR +S+SP  QT RS PLL  FSV      RCYSSGNDKYN LNST 
Sbjct: 1   MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTS 60

Query: 61  -KNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDELMKEI 120
            +NKDSLV+DD+S EELKRKID+FYEG D +SLPAIFEAILKRKLSGKH DADDELMKEI
Sbjct: 61  IENKDSLVDDDISNEELKRKIDRFYEG-DVESLPAIFEAILKRKLSGKHGDADDELMKEI 120

Query: 121 RQQLPGEVEDFNGEEEYDSDLM-----DDDSSDASDSEEEDRRI 154
           RQ++PGEVEDF  +EEYDSDL       D+      SEEEDRR+
Sbjct: 121 RQRMPGEVEDFK-DEEYDSDLSGELNESDEEMKEDSSEEEDRRV 162

[Close]

BLAST of Chy12G220180 vs. TAIR 10
Match: AT1G73770.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT3G18240.2); Has 951 Blast hits to 569 proteins in 87 species: Archae - 0; Bacteria - 746; Metazoa - 33; Fungi - 46; Plants - 57; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 3.4e-11
Identity = 39/96 (40.62%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 55  STKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDELMKE 114
           S  ++    E+ +S EELK++I  F + G+ D++P +FEA++ RKLSGKH+D+DDE+M  
Sbjct: 52  SDSSRGFRTEEVLSKEELKKRIQSFLDDGNEDAIPDLFEALMIRKLSGKHDDSDDEVMDV 111

Query: 115 IRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEE 151
           +R+     V D +  ++ DSD+  D   D+SDS+ E
Sbjct: 112 VRKY---PVNDAHKVDDIDSDIESDGHGDSSDSDIE 144

[Close]

BLAST of Chy12G220180 vs. TAIR 10
Match: AT1G73770.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT3G18240.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 3.4e-11
Identity = 39/96 (40.62%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 55  STKNKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDELMKE 114
           S  ++    E+ +S EELK++I  F + G+ D++P +FEA++ RKLSGKH+D+DDE+M  
Sbjct: 52  SDSSRGFRTEEVLSKEELKKRIQSFLDDGNEDAIPDLFEALMIRKLSGKHDDSDDEVMDV 111

Query: 115 IRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEE 151
           +R+     V D +  ++ DSD+  D   D+SDS+ E
Sbjct: 112 VRKY---PVNDAHKVDDIDSDIESDGHGDSSDSDIE 144

[Close]

BLAST of Chy12G220180 vs. TAIR 10
Match: AT3G18240.1 (Ribosomal protein S24/S35, mitochondrial )

HSP 1 Score: 61.2 bits (147), Expect = 8.3e-10
Identity = 48/152 (31.58%), Postives = 87/152 (57.24%), Query Frame = 0


Query: 11  NVCSRTLSVSP--PQQTFRSRPLLSPFSVLT---LRCYSSGNDKYNEL------NSTKNK 70
           ++C+R + +SP    Q   + P L+P +       R +SS + + +          +  K
Sbjct: 10  SLCARRIILSPRITHQISPNVPFLAPIAAPAAPKFRFFSSESGENSTTAPESSPTDSPEK 69

Query: 71  DSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDELMKEIRQQL 130
             LV +DVS +ELK +I+K++  G+ D+LP + EA+L+R+L  KH + DDEL+++I + L
Sbjct: 70  KDLVVEDVSNKELKSRIEKYFNEGNEDALPGVIEALLQRRLVDKHAETDDELLEKI-ESL 129

Query: 131 PGEVEDFNGEEEYDSDLMDDDSSDASDSEEED 152
           P   +D   +E+++SD    + + ++D E ED
Sbjct: 130 P--FKDDVKDEDFESDF---EEAHSTDEELED 155

[Close]

BLAST of Chy12G220180 vs. TAIR 10
Match: AT3G18240.2 (Ribosomal protein S24/S35, mitochondrial )

HSP 1 Score: 61.2 bits (147), Expect = 8.3e-10
Identity = 48/152 (31.58%), Postives = 87/152 (57.24%), Query Frame = 0


Query: 11  NVCSRTLSVSP--PQQTFRSRPLLSPFSVLT---LRCYSSGNDKYNEL------NSTKNK 70
           ++C+R + +SP    Q   + P L+P +       R +SS + + +          +  K
Sbjct: 10  SLCARRIILSPRITHQISPNVPFLAPIAAPAAPKFRFFSSESGENSTTAPESSPTDSPEK 69

Query: 71  DSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDELMKEIRQQL 130
             LV +DVS +ELK +I+K++  G+ D+LP + EA+L+R+L  KH + DDEL+++I + L
Sbjct: 70  KDLVVEDVSNKELKSRIEKYFNEGNEDALPGVIEALLQRRLVDKHAETDDELLEKI-ESL 129

Query: 131 PGEVEDFNGEEEYDSDLMDDDSSDASDSEEED 152
           P   +D   +E+++SD    + + ++D E ED
Sbjct: 130 P--FKDDVKDEDFESDF---EEAHSTDEELED 155

[Close]

BLAST of Chy12G220180 vs. TAIR 10
Match: AT4G21460.1 (Ribosomal protein S24/S35, mitochondrial )

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09
Identity = 53/158 (33.54%), Postives = 92/158 (58.23%), Query Frame = 0


Query: 7   GAVF---NVCSRTLSVSPPQQTFRSRPLLSPFSVLT---LRCYSSGNDKYNELNSTK--- 66
           GA+F   ++C+R + +S   +   + P L+P +       R +SS + + N   +T+   
Sbjct: 3   GALFRNASLCARRIILS--SRISPNVPFLTPIAAPAPPKFRFFSSESGE-NSTTATESSP 62

Query: 67  ----NKDSLVEDDVSTEELKRKIDKFYEGGDTDSLPAIFEAILKRKLSGKHEDADDELMK 126
               +K  LV +DVS +ELK +IDK +  G+ D+LP + EA+L+R+L  KH + DDELM+
Sbjct: 63  TDSSDKKDLVVEDVSNKELKSRIDKSFNEGNEDALPGVIEALLQRRLVDKHAETDDELME 122

Query: 127 EIRQQLPGEVEDFNGEEEYDSDLMDDDSSDASDSEEED 152
           +I + LP   +D   +E+++SD    + + ++D E ED
Sbjct: 123 KI-ESLP--FKDDVKDEDFESDF---EEAHSTDEELED 151

The following BLAST results are available for this feature:

BLAST of Chy12G220180 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G220180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT17	2.3e-68	92.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042590 PE=4 SV=1	[more]
A0A5D3BIA4	1.6e-64	87.66	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CEX3	1.6e-64	87.66	uncharacterized protein LOC103499929 OS=Cucumis melo OX=3656 GN=LOC103499929 PE=...	[more]
A0A6J1E804	2.5e-46	69.51	uncharacterized protein LOC111431572 OS=Cucurbita moschata OX=3662 GN=LOC1114315...	[more]
A0A6J1KP40	8.9e-44	68.52	uncharacterized protein LOC111495236 OS=Cucurbita maxima OX=3661 GN=LOC111495236...	[more]

BLAST of Chy12G220180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137486.1	4.05e-88	92.90	uncharacterized protein LOC101216147 [Cucumis sativus] >KGN64149.1 hypothetical ...	[more]
XP_008461340.1	3.66e-83	87.66	PREDICTED: uncharacterized protein LOC103499929 [Cucumis melo] >TYJ99013.1 uncha...	[more]
XP_038894045.1	2.50e-67	75.31	uncharacterized protein LOC120082798 [Benincasa hispida]	[more]
XP_023519890.1	6.56e-61	70.12	uncharacterized protein LOC111783221 [Cucurbita pepo subsp. pepo]	[more]
KAG6584340.1	2.18e-59	69.51	hypothetical protein SDJN03_20272, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Chy12G220180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73770.1	3.4e-11	40.63	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G73770.2	3.4e-11	40.63	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT3G18240.1	8.3e-10	31.58	Ribosomal protein S24/S35, mitochondrial	[more]
AT3G18240.2	8.3e-10	31.58	Ribosomal protein S24/S35, mitochondrial	[more]
AT4G21460.1	1.1e-09	33.54	Ribosomal protein S24/S35, mitochondrial	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G220180.1	Chy12G220180.1	mRNA