Chy12G219680 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G219680
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	ERAD-associated E3 ubiquitin-protein ligase HRD1-like
Location	chrH12: 17893801 .. 17895473 (-)
RNA-Seq Expression	Chy12G219680
Synteny	Chy12G219680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACACAGCAAAGAGCAACGTTGAGAAACAACACAAAGAGGAAAATAGAGAGCAGAGGAATTAACAGATTATTGGAAGAAGAAACAATTGATGAGATTCTTTCATTTGCCTCCGACTTCCCTTCCCATGAGGATGAAGCCGTAGATCTTCTCCTCGATTTCATCACAAACGAGCATACATCAAGTACTTACGTTTTTCTTTTAAAATGTTCCTCTTTTGTAAACAATTAAATTTATCTTTATTCATCAACTCAAGCTTTTTAATTAATGGATGATTTAAAATGATATTAGTATGTTGGTTTAAGAGATCGTGCGCTCAAATCCTATCTTATTTTTATCGGCTTTTGGATGAATGAGTTATTTAAGACGAATTGTTAAGTTGAGATGGCTAGAAGTTTTGGTCAATAATATATGTTTTAGCAAATATTCTTATATTTCAAGGAAATCAAATTAATTTGTTCATTTGTATTGATAATTTTATCATTTTAGTTTAAATGAATGGATGATTTTTCTTAGTATGAGTAGTTTTTTCTATTGAAGGTTATTGTAGATTTGCGTTAATCTGTGATCTTTAAACTTTTAAAGGACAGTTATGAAGTTTTAGCTTCCTATATATAATAGATTCTAGATTGAAAAAAATCCGGTTTATGTCTATCACATTCTTGAATTTTAATAGTTTATAGACTCTTGAATTTTAATATTTTATAGACTGAAATTGTAATTTAATAGAAAACACACTGATTTTAAAATAAAAATTTGATTGGAAAATTTGGTAAAATATACCTAGGTGATGTTCTGGATAGACCTAAGTATTTTTCAATTCTTTGTTGATTGGGTGGTTTTTTTTGCTAGATGGAGCTCTAGCAATAGATATGAATTTAGTTCATTGGGCAATTAACCGTTTACGTGCTGCCGATGCTGCCAATAGTGCCAGTTCAACACAACAGGTGATTTCTTTGGAAAGATGGAATGATTTAAGTCCAGTCTTAATAATCAACCAGATATAAAATAGATTTTCTGATAGTGGACAAAGGACTCCCAAACAAATAGTGGAGTTCTGACTTTCTTTTTCTAAAAGTAAGGGGTTGTTTGATGCATCAAATGAAGTCAATAAATTTAAGTTAACCCATCACATTTAAAAAGTTTGTAAAGTTTCAATAGGGTTTAATATTAAAATTAAATTGTTTACCCAAACTCAATAAATAATTAAGTGATTTTTTTCAACCCATAATAATTTTTCTGAAATTAAAGTATATTTAACATTTAAAATTTTTGTAAGAATTCGTAAAATTTCAAAATTTATAGTAATTTTAAAAAAAATAAAAAGATAATACACTAAATTTTCTAATTACCTTTATTTTTCTCGAAAACTAATATGCAGAACGCCTATTTGGAAAGCGATATTCTTGAAACGAGGGAAGGTATAGTAGACGTTACTGATTCTAATGACTTATTGGACGCTGACGATGAAGAGATGTGGATGGCGAACGTGAGACAACTTTCTCTAAACGATCTGAGCCTTCATGAAGGCTTCCCGTTCCGGGCTTCAAAATCGGCGATTCAGGCACTACCAGATGTTTGTACTACGGAGGACTTTTCTTCTTCTTGGGCGTGTGGTGTGTGTTTGGAGGACGAGATTGAGGCAAATGATGGGGCCAAACAGCTGCCCT

mRNA sequence

ATGGAAACACAGCAAAGAGCAACGTTGAGAAACAACACAAAGAGGAAAATAGAGAGCAGAGGAATTAACAGATTATTGGAAGAAGAAACAATTGATGAGATTCTTTCATTTGCCTCCGACTTCCCTTCCCATGAGGATGAAGCCGTAGATCTTCTCCTCGATTTCATCACAAACGAGCATACATCAAATGGAGCTCTAGCAATAGATATGAATTTAGTTCATTGGGCAATTAACCGTTTACGTGCTGCCGATGCTGCCAATAGTGCCAGTTCAACACAACAGAACGCCTATTTGGAAAGCGATATTCTTGAAACGAGGGAAGGTATAGTAGACGTTACTGATTCTAATGACTTATTGGACGCTGACGATGAAGAGATGTGGATGGCGAACGTGAGACAACTTTCTCTAAACGATCTGAGCCTTCATGAAGGCTTCCCGTTCCGGGCTTCAAAATCGGCGATTCAGGCACTACCAGATGTTTGTACTACGGAGGACTTTTCTTCTTCTTGGGCGTGTGGTGTGTGTTTGGAGGACGAGATTGAGGCAAATGATGGGGCCAAACAGCTGCCCT

Coding sequence (CDS)

ATGGAAACACAGCAAAGAGCAACGTTGAGAAACAACACAAAGAGGAAAATAGAGAGCAGAGGAATTAACAGATTATTGGAAGAAGAAACAATTGATGAGATTCTTTCATTTGCCTCCGACTTCCCTTCCCATGAGGATGAAGCCGTAGATCTTCTCCTCGATTTCATCACAAACGAGCATACATCAAATGGAGCTCTAGCAATAGATATGAATTTAGTTCATTGGGCAATTAACCGTTTACGTGCTGCCGATGCTGCCAATAGTGCCAGTTCAACACAACAGAACGCCTATTTGGAAAGCGATATTCTTGAAACGAGGGAAGGTATAGTAGACGTTACTGATTCTAATGACTTATTGGACGCTGACGATGAAGAGATGTGGATGGCGAACGTGAGACAACTTTCTCTAAACGATCTGAGCCTTCATGAAGGCTTCCCGTTCCGGGCTTCAAAATCGGCGATTCAGGCACTACCAGATGTTTGTACTACGGAGGACTTTTCTTCTTCTTGGGCGTGTGGTGTGTGTTTGGAGGACGAGATTGAGGCAAATGATGGGGCCAAACAGCTGCCCT

Protein sequence

METQQRATLRNNTKRKIESRGINRLLEEETIDEILSFASDFPSHEDEAVDLLLDFITNEHTSNGALAIDMNLVHWAINRLRAADAANSASSTQQNAYLESDILETREGIVDVTDSNDLLDADDEEMWMANVRQLSLNDLSLHEGFPFRASKSAIQALPDVCTTEDFSSSWACGVCLEDEIEANDGAKQLPX

Homology

[Close]

BLAST of Chy12G219680 vs. ExPASy Swiss-Prot
Match: Q500V9 (DNA polymerase epsilon subunit B OS=Arabidopsis thaliana OX=3702 GN=DPB2 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.8e-04
Identity = 33/88 (37.50%), Postives = 48/88 (54.55%), Query Frame = 0


Query: 10 RNNTKRKIESRGINRLLEEETIDEILSFASDFPSHED-EAVDLLLDFITNEHTSNGALAI 69
          R   ++K ++RG N  L+ + +DEIL FA  FP  +D EA+DLLLD +   H S+    +
Sbjct: 8  RKKIQKKFKNRGYN--LKFDALDEILVFADQFPDDDDGEAIDLLLDNLQETHKSS---TV 67

Query: 70 DMNLVHWAINRLRAADAANSASSTQQNA 97
          D   V   INRL  A  A    +T  ++
Sbjct: 68 DAESVRGLINRLLGAHNAPEEPTTSASS 90

[Close]

BLAST of Chy12G219680 vs. ExPASy TrEMBL
Match: A0A0A0LQL0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G043080 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.2e-88
Identity = 170/194 (87.63%), Postives = 179/194 (92.27%), Query Frame = 0


Query: 1   METQQRATLRNNTKRKIESRGINRLLEEETIDEILSFASDFPSHEDEAVDLLLDFITNEH 60
           METQQR TL+NNT+RKIE RG+NRLLEEE +DEI+SFASDFPSHED+AVDLLLDFITNEH
Sbjct: 1   METQQRTTLKNNTERKIERRGMNRLLEEEAVDEIISFASDFPSHEDDAVDLLLDFITNEH 60

Query: 61  TSNGALAIDMNLVHWAINRLRAADA----ANSASSTQQNAYLESDILETREGIVDVTDSN 120
           TSNGALAIDMNLVHWAIN LRAADA     NS SSTQQNAYLESDILETREG+VDVTDSN
Sbjct: 61  TSNGALAIDMNLVHWAINHLRAADAVVDVTNSVSSTQQNAYLESDILETREGVVDVTDSN 120

Query: 121 DLLDADDEEMWMANVRQLSLNDLSLHEGFPFRASKSAIQALPDVCTTEDFSSSWACGVCL 180
           DLLDADDEEMWMA+VRQLSLNDLSLHEGFPFRASKS IQALPDV T +DFSSSW CGVCL
Sbjct: 121 DLLDADDEEMWMAHVRQLSLNDLSLHEGFPFRASKSTIQALPDVFTAKDFSSSWVCGVCL 180

Query: 181 EDEIEANDGAKQLP 191
            DEIEANDGAKQLP
Sbjct: 181 NDEIEANDGAKQLP 194

[Close]

BLAST of Chy12G219680 vs. ExPASy TrEMBL
Match: A0A1S3BES6 (ERAD-associated E3 ubiquitin-protein ligase HRD1-like OS=Cucumis melo OX=3656 GN=LOC103488881 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.0e-65
Identity = 142/192 (73.96%), Postives = 157/192 (81.77%), Query Frame = 0


Query: 1   METQQRATLRNNTKRKIESRGINRLLEEETIDEILSFASDFPSHEDEAVDLLLDFITNEH 60
           ME QQ  TLR NTKRKIESRG+NRLLEEE +DEILSFASDFPSHEDEAVDLLLD IT E 
Sbjct: 1   MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTEL 60

Query: 61  TSNGALAIDMNLVHWAINRLRAADAANSASSTQQNAYLESDILETREGIVDVTDSN--DL 120
           TSN A  IDM+LVHWA+  LRAA+   SA ST Q+A  ESDILETRE IVD+TDSN  DL
Sbjct: 61  TSNRARVIDMDLVHWAVTLLRAAN-NTSADSTPQDANFESDILETRESIVDLTDSNVTDL 120

Query: 121 LDADDEEMWMANVRQLSLNDLSLHEGFPFRASKSAIQALPDVCTTEDFSSSWACGVCLED 180
           LD DD ++WM +VRQLSL+DL  H  FPF ASKSAIQALPDV  T+DFSSSWAC VC++D
Sbjct: 121 LDDDDVDIWM-HVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDD 180

Query: 181 EIEANDGAKQLP 191
           EI+A DGAKQLP
Sbjct: 181 EIDAKDGAKQLP 190

[Close]

BLAST of Chy12G219680 vs. ExPASy TrEMBL
Match: A0A5D3BH26 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002660 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.5e-48
Identity = 118/192 (61.46%), Postives = 130/192 (67.71%), Query Frame = 0


Query: 1   METQQRATLRNNTKRKIESRGINRLLEEETIDEILSFASDFPSHEDEAVDLLLDFITNEH 60
           ME QQ  TLR NTKRKIESRG+NRLLEEE +DEILSFASDFPSHEDEAVDLLLD      
Sbjct: 1   MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLD------ 60

Query: 61  TSNGALAIDMNLVHWAINRLRAADAANSASSTQQNAYLESDILETREGIVDVTDSN--DL 120
                                             +A  ESDILETRE IVD+TDSN  DL
Sbjct: 61  ----------------------------------DANFESDILETRESIVDLTDSNVTDL 120

Query: 121 LDADDEEMWMANVRQLSLNDLSLHEGFPFRASKSAIQALPDVCTTEDFSSSWACGVCLED 180
           LD DD ++WM +VRQLSL+DL  H  FPF ASKSAIQALPDV  T+DFSSSWAC VC++D
Sbjct: 121 LDDDDVDIWM-HVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDD 151

Query: 181 EIEANDGAKQLP 191
           EI+A DGAKQLP
Sbjct: 181 EIDAKDGAKQLP 151

[Close]

BLAST of Chy12G219680 vs. ExPASy TrEMBL
Match: A0A6P4DE83 (DNA polymerase epsilon subunit OS=Arachis duranensis OX=130453 GN=LOC107490571 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.7e-04
Identity = 40/86 (46.51%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 7  ATLRNNTKRKIESRGINRLLEEETIDEILSFASDFP-SHEDEAVDLLLDFITNEHTSNGA 66
          A+ R   +RK + RG  R+L+ E +DEILSF S F  S EDEA+DLLLD +  E  S  +
Sbjct: 3  ASTRKKVQRKCKIRG--RVLKVEALDEILSFVSRFEGSDEDEAIDLLLDELELELESQKS 62

Query: 67 LAIDMNLVHWAINRLRAADAANSASS 92
            I+   VH  ++RL  ADAA   SS
Sbjct: 63 TIIEKEPVHRVVSRLLEADAAVEESS 86

[Close]

BLAST of Chy12G219680 vs. NCBI nr
Match: KGN64205.1 (hypothetical protein Csa_014029 [Cucumis sativus])

HSP 1 Score: 328 bits (842), Expect = 4.53e-112
Identity = 170/194 (87.63%), Postives = 179/194 (92.27%), Query Frame = 0


Query: 1   METQQRATLRNNTKRKIESRGINRLLEEETIDEILSFASDFPSHEDEAVDLLLDFITNEH 60
           METQQR TL+NNT+RKIE RG+NRLLEEE +DEI+SFASDFPSHED+AVDLLLDFITNEH
Sbjct: 1   METQQRTTLKNNTERKIERRGMNRLLEEEAVDEIISFASDFPSHEDDAVDLLLDFITNEH 60

Query: 61  TSNGALAIDMNLVHWAINRLRAADAA----NSASSTQQNAYLESDILETREGIVDVTDSN 120
           TSNGALAIDMNLVHWAIN LRAADA     NS SSTQQNAYLESDILETREG+VDVTDSN
Sbjct: 61  TSNGALAIDMNLVHWAINHLRAADAVVDVTNSVSSTQQNAYLESDILETREGVVDVTDSN 120

Query: 121 DLLDADDEEMWMANVRQLSLNDLSLHEGFPFRASKSAIQALPDVCTTEDFSSSWACGVCL 180
           DLLDADDEEMWMA+VRQLSLNDLSLHEGFPFRASKS IQALPDV T +DFSSSW CGVCL
Sbjct: 121 DLLDADDEEMWMAHVRQLSLNDLSLHEGFPFRASKSTIQALPDVFTAKDFSSSWVCGVCL 180

Query: 181 EDEIEANDGAKQLP 190
            DEIEANDGAKQLP
Sbjct: 181 NDEIEANDGAKQLP 194

[Close]

BLAST of Chy12G219680 vs. NCBI nr
Match: XP_008446033.1 (PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1-like [Cucumis melo])

HSP 1 Score: 253 bits (645), Expect = 3.81e-82
Identity = 142/192 (73.96%), Postives = 157/192 (81.77%), Query Frame = 0


Query: 1   METQQRATLRNNTKRKIESRGINRLLEEETIDEILSFASDFPSHEDEAVDLLLDFITNEH 60
           ME QQ  TLR NTKRKIESRG+NRLLEEE +DEILSFASDFPSHEDEAVDLLLD IT E 
Sbjct: 1   MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLDVITTEL 60

Query: 61  TSNGALAIDMNLVHWAINRLRAADAANSASSTQQNAYLESDILETREGIVDVTDSN--DL 120
           TSN A  IDM+LVHWA+  LRAA+   SA ST Q+A  ESDILETRE IVD+TDSN  DL
Sbjct: 61  TSNRARVIDMDLVHWAVTLLRAANNT-SADSTPQDANFESDILETRESIVDLTDSNVTDL 120

Query: 121 LDADDEEMWMANVRQLSLNDLSLHEGFPFRASKSAIQALPDVCTTEDFSSSWACGVCLED 180
           LD DD ++WM +VRQLSL+DL  H  FPF ASKSAIQALPDV  T+DFSSSWAC VC++D
Sbjct: 121 LDDDDVDIWM-HVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDD 180

Query: 181 EIEANDGAKQLP 190
           EI+A DGAKQLP
Sbjct: 181 EIDAKDGAKQLP 190

[Close]

BLAST of Chy12G219680 vs. NCBI nr
Match: TYJ99062.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 196 bits (497), Expect = 6.84e-55
Identity = 118/192 (61.46%), Postives = 130/192 (67.71%), Query Frame = 0


Query: 1   METQQRATLRNNTKRKIESRGINRLLEEETIDEILSFASDFPSHEDEAVDLLLDFITNEH 60
           ME QQ  TLR NTKRKIESRG+NRLLEEE +DEILSFASDFPSHEDEAVDLLLD      
Sbjct: 1   MEAQQIITLRTNTKRKIESRGMNRLLEEEAVDEILSFASDFPSHEDEAVDLLLD------ 60

Query: 61  TSNGALAIDMNLVHWAINRLRAADAANSASSTQQNAYLESDILETREGIVDVTDSN--DL 120
                                             +A  ESDILETRE IVD+TDSN  DL
Sbjct: 61  ----------------------------------DANFESDILETRESIVDLTDSNVTDL 120

Query: 121 LDADDEEMWMANVRQLSLNDLSLHEGFPFRASKSAIQALPDVCTTEDFSSSWACGVCLED 180
           LD DD ++WM +VRQLSL+DL  H  FPF ASKSAIQALPDV  T+DFSSSWAC VC++D
Sbjct: 121 LDDDDVDIWM-HVRQLSLDDLIRHASFPFGASKSAIQALPDVFPTDDFSSSWACAVCMDD 151

Query: 181 EIEANDGAKQLP 190
           EI+A DGAKQLP
Sbjct: 181 EIDAKDGAKQLP 151

[Close]

BLAST of Chy12G219680 vs. NCBI nr
Match: QHO43398.1 (DNA polymerase epsilon subunit [Arachis hypogaea])

HSP 1 Score: 53.9 bits (128), Expect = 1.13e-04
Identity = 40/86 (46.51%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 7  ATLRNNTKRKIESRGINRLLEEETIDEILSFASDFP-SHEDEAVDLLLDFITNEHTSNGA 66
          A+ R   +RK + RG  R+L+ E +DEILSF S F  S EDEA+DLLLD +  E  S  +
Sbjct: 3  ASTRKKVQRKCKIRG--RVLKVEALDEILSFVSRFEGSDEDEAIDLLLDELELELESQKS 62

Query: 67 LAIDMNLVHWAINRLRAADAANSASS 91
            I+   VH  ++RL  ADAA   SS
Sbjct: 63 TIIEKEPVHRVVSRLLEADAAVEESS 86

[Close]

BLAST of Chy12G219680 vs. NCBI nr
Match: XP_025701412.1 (DNA polymerase epsilon subunit B [Arachis hypogaea])

HSP 1 Score: 53.9 bits (128), Expect = 1.15e-04
Identity = 40/86 (46.51%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 7  ATLRNNTKRKIESRGINRLLEEETIDEILSFASDFP-SHEDEAVDLLLDFITNEHTSNGA 66
          A+ R   +RK + RG  R+L+ E +DEILSF S F  S EDEA+DLLLD +  E  S  +
Sbjct: 3  ASTRKKVQRKCKIRG--RVLKVEALDEILSFVSRFEGSDEDEAIDLLLDELELELESQKS 62

Query: 67 LAIDMNLVHWAINRLRAADAANSASS 91
            I+   VH  ++RL  ADAA   SS
Sbjct: 63 TIIEKEPVHRVVSRLLEADAAVEESS 86

[Close]

BLAST of Chy12G219680 vs. TAIR 10
Match: AT5G22110.1 (DNA polymerase epsilon subunit B2 )

HSP 1 Score: 46.2 bits (108), Expect = 3.4e-05
Identity = 33/88 (37.50%), Postives = 48/88 (54.55%), Query Frame = 0


Query: 10 RNNTKRKIESRGINRLLEEETIDEILSFASDFPSHED-EAVDLLLDFITNEHTSNGALAI 69
          R   ++K ++RG N  L+ + +DEIL FA  FP  +D EA+DLLLD +   H S+    +
Sbjct: 8  RKKIQKKFKNRGYN--LKFDALDEILVFADQFPDDDDGEAIDLLLDNLQETHKSS---TV 67

Query: 70 DMNLVHWAINRLRAADAANSASSTQQNA 97
          D   V   INRL  A  A    +T  ++
Sbjct: 68 DAESVRGLINRLLGAHNAPEEPTTSASS 90

The following BLAST results are available for this feature:

BLAST of Chy12G219680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q500V9	4.8e-04	37.50	DNA polymerase epsilon subunit B OS=Arabidopsis thaliana OX=3702 GN=DPB2 PE=1 SV...	[more]

BLAST of Chy12G219680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQL0	4.2e-88	87.63	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G043080 P...	[more]
A0A1S3BES6	3.0e-65	73.96	ERAD-associated E3 ubiquitin-protein ligase HRD1-like OS=Cucumis melo OX=3656 GN...	[more]
A0A5D3BH26	2.5e-48	61.46	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6P4DE83	1.7e-04	46.51	DNA polymerase epsilon subunit OS=Arachis duranensis OX=130453 GN=LOC107490571 P...	[more]

BLAST of Chy12G219680 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64205.1	4.53e-112	87.63	hypothetical protein Csa_014029 [Cucumis sativus]	[more]
XP_008446033.1	3.81e-82	73.96	PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1-like [Cucumis melo]	[more]
TYJ99062.1	6.84e-55	61.46	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
QHO43398.1	1.13e-04	46.51	DNA polymerase epsilon subunit [Arachis hypogaea]	[more]
XP_025701412.1	1.15e-04	46.51	DNA polymerase epsilon subunit B [Arachis hypogaea]	[more]

BLAST of Chy12G219680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22110.1	3.4e-05	37.50	DNA polymerase epsilon subunit B2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15710:SF127	SUBFAMILY NOT NAMED	coord: 6..183
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 6..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G219680.1	Chy12G219680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0043229	intracellular organelle
molecular_function	GO:0061630	ubiquitin protein ligase activity