Chy12G217460 (gene) Cucumber (hystrix) v1

Overview
NameChy12G217460
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH12: 16389264 .. 16390808 (+)
RNA-Seq ExpressionChy12G217460
SyntenyChy12G217460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCTGAATCTTCAACTTTGGTCGACCGGTCCGACAGCGCTGAGCTGCCGGTTGGGGATCAGTTGAAACCGGCTGTTACTGTTACCGTCACTTCCCCTTGTAGTAAGAAAAGGAAGAGTCGGAATAATTCCTCAGCCTCCTCCGCCCAGTCCAAGGTCTAGAATTAATTTTCAATTTTTATTTTATTGGTTTTTTGTTTTAAATTTTGTAATTTAAATAAACTCCCCTTATATTATATATATATATTTAATTTCAGGGGAGTAATGATCAGAGCAATGGGAAAAAGGCTAAAAGTAAAGGAGAAGTAGAAGAAGGGAAAGAAAGAGATCAAAAGGCCAAAAATGGGAAGAAATTATTAGAGGAGAAATTAAAAGATTCAGAAGATGGAGGTGCAACCACTGGTTACATTCATGTCAGAGCAAGAAGGGGCCAGGCCACTGATAGCCACAGTCTTGCTGAGAGGGTAATTAATTATTAATATAGTTAATTAATAATTTAAAAAGTATAAAGTTTTAATTATTTGAAAAAGAAATATTTAAAGTATACCCCACACGCTAAAAACGACATGTCGTTGTCTTGTCATTTCAGGTGAGAAGAGAGAAGATTAGTGAAAGGATGAAGACATTGCAACGCCTTGTTCCCGGTTGCGACAAGGTAAACTTATACTTATATACTTCTATTTCATTTCATTTCATTCATTCATTCACTCATTCCAATTAAAATTCTTTTCTTTTATTATTAATTAATTAATTTGGTGCTAAAAAATGGCCATGTGGGTTTTGGTGATGAATAGGTTACAGGGAAGGCCCTTATGTTGGATGAAATTATCAATTATGTTCAGTCTCTACAAAATCAAGTTGAGGTATATATATATATACATAGATAACACTATTTTAAAATAATTTCTTTAATCAATCTCGTAATTATATCATTAAATTTCACTAACTTCTATTTTTCTTTCCAGTTTCTCTCTATGAAACTCGCTTCTTTGAACCCAATTTTCTTCGACTTCAGAATGGACTTAGACGGCCTCATGATCCAACCAGAGGTGACCCAAAAAAAAAAAAACCATCAAAAAGAAAATTAATTTTGATTAAAAAAACTCATTTTTAATTAATATATATTTTTAATTTTGACCAGACGACGTCGTTGAGTAGCATAACACCAACACTACCAGCGATGGCGCAATGCAGCGTCGTACCACAGCCGGCGTTGATCGACACGACGCCTCCGGCGACCCCATCTCCGGCAATCTCCACTGGGAATAATTTTCCCTTAATGGACCCTTCTTCAGCTAATTTGTTTCTACTTCAACAAGGGATAAGCCCAAGTAACGGTTACTCCCAATCGTCACAGGTAATTAAATTAAATGTAATGTAAGATATTAGATTATTGGGGATTTAATTAACTTGAGGACATTAGAAGTAACATTCAACATCGTTATCAGGATAACGTTAAAGTTTCATCATGGGACGTGGAAGACCAAAAAAGAAAGCAGCTTCTTATTTCATCAGCAATTGGCGACAACTTATGTTACTTCCATTAA

mRNA sequence

CCCTGAATCTTCAACTTTGGTCGACCGGTCCGACAGCGCTGAGCTGCCGGTTGGGGATCAGTTGAAACCGGCTGTTACTGTTACCGTCACTTCCCCTTGTAGTAAGAAAAGGAAGAGTCGGAATAATTCCTCAGCCTCCTCCGCCCAGTCCAAGGGGAGTAATGATCAGAGCAATGGGAAAAAGGCTAAAAGTAAAGGAGAAGTAGAAGAAGGGAAAGAAAGAGATCAAAAGGCCAAAAATGGGAAGAAATTATTAGAGGAGAAATTAAAAGATTCAGAAGATGGAGGTGCAACCACTGGTTACATTCATGTCAGAGCAAGAAGGGGCCAGGCCACTGATAGCCACAGTCTTGCTGAGAGGGTGAGAAGAGAGAAGATTAGTGAAAGGATGAAGACATTGCAACGCCTTGTTCCCGGTTGCGACAAGGTTACAGGGAAGGCCCTTATGTTGGATGAAATTATCAATTATGTTCAGTCTCTACAAAATCAAGTTGAGTTTCTCTCTATGAAACTCGCTTCTTTGAACCCAATTTTCTTCGACTTCAGAATGGACTTAGACGGCCTCATGATCCAACCAGAGACGACGTCGTTGAGTAGCATAACACCAACACTACCAGCGATGGCGCAATGCAGCGTCGTACCACAGCCGGCGTTGATCGACACGACGCCTCCGGCGACCCCATCTCCGGCAATCTCCACTGGGAATAATTTTCCCTTAATGGACCCTTCTTCAGCTAATTTGTTTCTACTTCAACAAGGGATAAGCCCAAGTAACGGTTACTCCCAATCGTCACAGGATAACGTTAAAGTTTCATCATGGGACGTGGAAGACCAAAAAAGAAAGCAGCTTCTTATTTCATCAGCAATTGGCGACAACTTATGTTACTTCCATTAA

Coding sequence (CDS)

CCCTGAATCTTCAACTTTGGTCGACCGGTCCGACAGCGCTGAGCTGCCGGTTGGGGATCAGTTGAAACCGGCTGTTACTGTTACCGTCACTTCCCCTTGTAGTAAGAAAAGGAAGAGTCGGAATAATTCCTCAGCCTCCTCCGCCCAGTCCAAGGGGAGTAATGATCAGAGCAATGGGAAAAAGGCTAAAAGTAAAGGAGAAGTAGAAGAAGGGAAAGAAAGAGATCAAAAGGCCAAAAATGGGAAGAAATTATTAGAGGAGAAATTAAAAGATTCAGAAGATGGAGGTGCAACCACTGGTTACATTCATGTCAGAGCAAGAAGGGGCCAGGCCACTGATAGCCACAGTCTTGCTGAGAGGGTGAGAAGAGAGAAGATTAGTGAAAGGATGAAGACATTGCAACGCCTTGTTCCCGGTTGCGACAAGGTTACAGGGAAGGCCCTTATGTTGGATGAAATTATCAATTATGTTCAGTCTCTACAAAATCAAGTTGAGTTTCTCTCTATGAAACTCGCTTCTTTGAACCCAATTTTCTTCGACTTCAGAATGGACTTAGACGGCCTCATGATCCAACCAGAGACGACGTCGTTGAGTAGCATAACACCAACACTACCAGCGATGGCGCAATGCAGCGTCGTACCACAGCCGGCGTTGATCGACACGACGCCTCCGGCGACCCCATCTCCGGCAATCTCCACTGGGAATAATTTTCCCTTAATGGACCCTTCTTCAGCTAATTTGTTTCTACTTCAACAAGGGATAAGCCCAAGTAACGGTTACTCCCAATCGTCACAGGATAACGTTAAAGTTTCATCATGGGACGTGGAAGACCAAAAAAGAAAGCAGCTTCTTATTTCATCAGCAATTGGCGACAACTTATGTTACTTCCATTAA

Protein sequence

P*IFNFGRPVRQR*AAGWGSVETGCYCYRHFPL**EKEESE*FLSLLRPVQGE**SEQWEKG*K*RRSRRRERKRSKGQKWEEIIRGEIKRFRRWRCNHWLHSCQSKKGPGH**PQSC*EGEKRED**KDEDIATPCSRLRQGYREGPYVG*NYQLCSVSTKSS*VSLYETRFFEPNFLRLQNGLRRPHDPTRDDVVE*HNTNTTSDGAMQRRTTAGVDRHDASGDPISGNLHWE*FSLNGPFFS*FVSTSTRDKPK*RLLPIVTG*R*SFIMGRGRPKKKAASYFISNWRQLMLLPLX
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..207

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy12G217460.1Chy12G217460.1mRNA