Chy12G216090 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G216090
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH12: 15368702 .. 15369295 (+)
RNA-Seq Expression	Chy12G216090
Synteny	Chy12G216090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCCAAGGAATTAATGGGAAGAAATCATTATAGGACAATCGTGGCTAATCCAAAATTGAAAGAGAAATGGATAGAGAAAGGGAAGGATTTGTTATCAGTTAATGATAACGTGCAGACAGGTGACTCATCAATGCAGGACTTATTAGAAGATAATAAGAAGATACAGAAGAATGACTCAAAGAGAAAAGTGGTGTTCACCTCCCAAAACAACGAAACATACCTGTACACACCAGATGCGGCCCCCTCAAAGAAAATGGTTGTTGAAGCCCAAACAGAAAACATTAATGAAGACTACAAAGAGAGGCAACACTTCAAGGGCCCACAAGATCAACTCCAAAAATATTATAAAGATAAACAAAAAGAAATTTACTCAAGCAAAGAAAAGGTTGTCCTCTCTTCGAAGTTGATTTACAGCAAAGAAATAGAAAAGGAAGGAGATTTAGTCGTGGACTTAAACAGCAAAAAACTAAAGTTAGTTGGCAGCACATCAAGCACTGATACCTCAAAAGATAACATCTCTCCTACTCCAAACGTCGTTCTTGAACCCCCCCCCCCCCCTCCAGATTTCACCAGCAATCTAAAAGCTTGA

mRNA sequence

ATGGAGGCCAAGGAATTAATGGGAAGAAATCATTATAGGACAATCGTGGCTAATCCAAAATTGAAAGAGAAATGGATAGAGAAAGGGAAGGATTTGTTATCAGTTAATGATAACGTGCAGACAGGTGACTCATCAATGCAGGACTTATTAGAAGATAATAAGAAGATACAGAAGAATGACTCAAAGAGAAAAGTGGTGTTCACCTCCCAAAACAACGAAACATACCTGTACACACCAGATGCGGCCCCCTCAAAGAAAATGGTTGTTGAAGCCCAAACAGAAAACATTAATGAAGACTACAAAGAGAGGCAACACTTCAAGGGCCCACAAGATCAACTCCAAAAATATTATAAAGATAAACAAAAAGAAATTTACTCAAGCAAAGAAAAGGTTGTCCTCTCTTCGAAGTTGATTTACAGCAAAGAAATAGAAAAGGAAGGAGATTTAGTCGTGGACTTAAACAGCAAAAAACTAAAGTTAGTTGGCAGCACATCAAGCACTGATACCTCAAAAGATAACATCTCTCCTACTCCAAACGTCGTTCTTGAACCCCCCCCCCCCCCTCCAGATTTCACCAGCAATCTAAAAGCTTGA

Coding sequence (CDS)

ATGGAGGCCAAGGAATTAATGGGAAGAAATCATTATAGGACAATCGTGGCTAATCCAAAATTGAAAGAGAAATGGATAGAGAAAGGGAAGGATTTGTTATCAGTTAATGATAACGTGCAGACAGGTGACTCATCAATGCAGGACTTATTAGAAGATAATAAGAAGATACAGAAGAATGACTCAAAGAGAAAAGTGGTGTTCACCTCCCAAAACAACGAAACATACCTGTACACACCAGATGCGGCCCCCTCAAAGAAAATGGTTGTTGAAGCCCAAACAGAAAACATTAATGAAGACTACAAAGAGAGGCAACACTTCAAGGGCCCACAAGATCAACTCCAAAAATATTATAAAGATAAACAAAAAGAAATTTACTCAAGCAAAGAAAAGGTTGTCCTCTCTTCGAAGTTGATTTACAGCAAAGAAATAGAAAAGGAAGGAGATTTAGTCGTGGACTTAAACAGCAAAAAACTAAAGTTAGTTGGCAGCACATCAAGCACTGATACCTCAAAAGATAACATCTCTCCTACTCCAAACGTCGTTCTTGAACCCCCCCCCCCCCCTCCAGATTTCACCAGCAATCTAAAAGCTTGA

Protein sequence

MEAKELMGRNHYRTIVANPKLKEKWIEKGKDLLSVNDNVQTGDSSMQDLLEDNKKIQKNDSKRKVVFTSQNNETYLYTPDAAPSKKMVVEAQTENINEDYKERQHFKGPQDQLQKYYKDKQKEIYSSKEKVVLSSKLIYSKEIEKEGDLVVDLNSKKLKLVGSTSSTDTSKDNISPTPNVVLEPPPPPPDFTSNLKA*

Homology

The following BLAST results are available for this feature:

BLAST of Chy12G216090 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G216090 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G216090 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G216090 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G216090.1	Chy12G216090.1	mRNA