Chy12G215830 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G215830
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RNase H domain-containing protein
Location	chrH12: 15109363 .. 15112800 (-)
RNA-Seq Expression	Chy12G215830
Synteny	Chy12G215830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTAACATTTTCAAATCCTCCAATTACCAAATCATCCGTTCAAAATCATTATTAGCAGCAAGAGAATTGCACAAACGACCGATACCAATTCCAGTGGCATGGACAAGGCCAGAATTTGGATGGACAAAGCTGAATTTCGATGGCTCTTCAAAAGGGGAAATAGGACCCGGTGTGGCCAGCATTGGGGGTGTTTTAAGAGACCACAAGGCCCAGTTTTTGTTAGGATATGCAGAGCCCATAGGCAGAGCCTATAGCTCCATGGCTGAACTTACAGCACTTACCAAAGGCTTGGAATTGGTCCTTGAAAATGGGTGGAAGGATGTTTGGGTTGAAGGAGATGCTAAGGGATTGGTGGAAATACTAGCTGAGAATAGAGAGGTTAAATGTATGGAAGCTCGAAGTTATTTTAGGCACATAAAATCTTTATTACTTGATTTTGATAATTGTAAAGTTAGTCATATTTATAGGGAAGGTAATAAAGTTGCTGATAGATTTGCTTCCATTGGTCATCGTTGTAAGAAGCTTGAAATTTGGAGGGAACTTCCTCCATTGGAGACTTTGGATATGATACGTCATGATGCTGAGGGGAAGATTACTTTTAGGAGAAGGTAAATATATATAAAGTAGTTTTTTATAAGTTTTGTTTTGTTTGCTTATGTTATGTGTAACTTCCTTGATGCTTTGTTGTTTTTTTCCTTTTCTTTAGAGGAAATGGATATGTTGTTAACTGACAAAGTAAAATTGATTGTGTGTATATATATGTAATATTTATGTTGCATTTGTTTCCTGTCATTGATTTTAGCTTTGGTTTGATTTTAATTTCTCTTTTGTTTATTGACTTTGGAAAATAATCTAATCTAAAAAGTAAATTCAAACTAAAACAAATTTGGCAACCAAACATTTATATATGAAAGTTTAGTATATTTAAACCTTCTATTTCAGAAACAAGTATAAGTTAAAATGTCATACTTAAACAACTCAACTCGAATGATATTCTCTTCGTTAGAATGGAATAACTCCATATTTTTCCTTATTTATGTTTAACCTTTTTACCTTTATAAAAAAAAAAAATACGATCTTTTCTTCTATTTTTATTTTACCATTTATGGAGTGGTTTCAACTTCTTCTTTTATGATTATTGAACGAAATTTATAATATTACACCTCTAACTTCTGTTGTTAATACCCTTATATCTCTATCGGTGATAAATCAATACATGCAATATAAACTATAAATAATAGATTTTAACCGATTTTGTTATATTTACATTTTTCTTATTTTAAAATGTTGCTTTATTGTTATTACTAGCATTAGTATAAGATCTTACAAAATAAAACTTAAAAGTCAGCTACATAACCTAATCGAACTTCCACATTTTCTGTCAATATTTTTTACTGTAAAGAATTTTTCGCTTCTATGTAAATTCATTAAGTAAGTAAATTGTCTTGTAGAAAGGCAACCTAAATTAGTTGGACTAAAATTACATCTTGTAAACAAAATTGTGTGTTTTCTGCTTTTATATGATATTTTCTCAAATTCAACCAAAGAAATAACTCATTTATTTTATAAAAGATTCTAACGCTCCAACAATATAACACAATTTTCAAGTAGGGTAGTTTCTAAAAAATTGTGTACTTACATCTTATAAAGGAATGTATTCCATAATTTTGCGGATATAGTAAGGGAGAGAGAGTGGTTTTTAGATCCAAATTAATAGAACAGTATTAAAGCATTGCCTATAAGGTTAATGAGACAGTAATTAATAGTAAAAAATAATGTAGAAAATGCGACAACATAACACTTTTCTATGTTTCCAATCCAGAAAAAACCAACTTCCACCAAAAGTTGAAGAAATTCAAAAACAGGAGTACAATTCTAACTAAGCTTCTGGTACAAACAAACAAAGTAGTACAATCTAACTTTACCAAATATCTCAAGTCTTCAAATCAAATGTTGCATTTATTAAAACAACCTAAAGAAAAACCCACTTTGATAATAATAAGAAGAAAAGAATGTGGGATAGTACAATTCAATACAACCAACTAGTTTTTTTCATTTGTACCGCAGAGTTCATCCACCGTCTCATATATATACACACAAAATATTGTTCGTAAACGGAAGGAGGCGATGATGATCAAACCAGATTGAAAGATACGTCATTGAGTGCAGCGTTGATGTCAAAACTTATTTCAAAATTCCAACTTTTCCCATCAGCGCTTCATTCAATCACGTTTCTTCCTTCATTCTGGCTCAACCTTTTCAATTCCCATTTCGTGTTTTATGCGTTTTCCATTATAATTTTTTCTTTTCTTAGTCTAAGGGAAGTTTGAGATATTACTCAATTACTCTGTTTAAACAGAACAGAAACATGGGAGGAACTAACCATTTATTTATTGCAGGTGTGTTTATGGGGAAAAAAGCAGGGGAAGGCCTAAATTTACTAAGTAGAAAAAAAGTTTAGGGTATGGTATTAACATACAAACTGCGGTACGGAATATGGATATGTTATATATATCAGCGTTTCTTGGATGCAGGTTGCTTCTGGGAATTGAAGTAGACGGCGGCAACAGGAAGTCCGAGGGCATTCTGTGAGGCGAATTGTCGAGTTCTGAAATTGCTCCTGGTGGTGGGTGGTCGGAGCCTTCCGCCGAGAGCAGTGTTTGTTTTGAAAACGGCTAATACATATGGGTGAATGCCGGTTGGAGGCTGTGGATCCATGTACTGCACCACCTCTACAACCATTCCTTCCTTCTTTCTATTTGCTTCTCTCAAATCCCATTTCTTTCCACAGATTCAAAACCCCAATTGTGAAATGCCAAAATGTTTAACATTCTCAAATCCCCCAAATACCAAATCATCCGTTCAAAATCATTATTAGCAGCAAGACAATTGCACAAACGACCGAAAACGATTCCAGTGGCATGGAGAAGGCCAGAATTTGGATGGACAAAGCTGAATTTCGATGGCTCTTCAAAAGGGGAAATAGGACCCGGTGTGGCGAGCATTGGGGGCGTTTTAAGAGACCACAAGGCCCAGTTTTTGTTAGGATATGCAGAGCCCATAGGCAGAGCCAACAGCGCCATGGCTGAACTTACAGCACTTACCAAAGGCTTGGAATTGGTCCTTGAAAATGGGTGGAAGGATGTTTGGGTTGAAGGAGACGCTAAGGGATTGGTGGAAATAGTAGCTGAGAATAAAGAGGTTAAACGTGTGGAAGCTCGAAGTTATTTTAGGCACATAAAATCTTTAATACATGATTTTGATAATTGTAAAGTTAGTCATATTTATAGGGAAGGCAATAAAGTTGCTGATAGATTTGCTTCCATTGGTCATCGTTGTAAGAAGCTTGAAATTTGGAGGGAACTTCCTCCATTAGAGACTTTGGATGTGATGCGTCATGATGCTGAGGGGAAGATTACTTTTAGGAGAAAATAA

mRNA sequence

ATGTTTAACATTTTCAAATCCTCCAATTACCAAATCATCCGTTCAAAATCATTATTAGCAGCAAGAGAATTGCACAAACGACCGATACCAATTCCAGTGGCATGGACAAGGCCAGAATTTGGATGGACAAAGCTGAATTTCGATGGCTCTTCAAAAGGGGAAATAGGACCCGGTGTGGCCAGCATTGGGGGTGTTTTAAGAGACCACAAGGCCCAGTTTTTGTTAGGATATGCAGAGCCCATAGGCAGAGCCTATAGCTCCATGGCTGAACTTACAGCACTTACCAAAGGCTTGGAATTGGTCCTTGAAAATGGGTGGAAGGATGTTTGGGTTGAAGGAGATGCTAAGGGATTGGTGGAAATACTAGCTGAGAATAGAGAGGTTAAATGTATGGAAGCTCGAAGTTATTTTAGGCACATAAAATCTTTATTACTTGATTTTGATAATTGTAAAGTTAGTCATATTTATAGGGAAGGTAATAAAGTTGCTGATAGATTTGCTTCCATTGGTCATCGTTGTAAGAAGCTTGAAATTTGGAGGGAACTTCCTCCATTGGAGACTTTGGATATGATACGTCATGATGCTGAGGGGAAGATTACTTTTAGGAGAAGGTTGCTTCTGGGAATTGAAGTAGACGGCGGCAACAGGAAGTCCGAGGGCATTCTGCCAGAATTTGGATGGACAAAGCTGAATTTCGATGGCTCTTCAAAAGGGGAAATAGGACCCGGTGTGGCGAGCATTGGGGGCGTTTTAAGAGACCACAAGGCCCAGTTTTTGTTAGGATATGCAGAGCCCATAGGCAGAGCCAACAGCGCCATGGCTGAACTTACAGCACTTACCAAAGGCTTGGAATTGGTCCTTGAAAATGGGTGGAAGGATGTTTGGGTTGAAGGAGACGCTAAGGGATTGGTGGAAATAGTAGCTGAGAATAAAGAGGTTAAACGTGTGGAAGCTCGAAGTTATTTTAGGCACATAAAATCTTTAATACATGATTTTGATAATTGTAAAGTTAGTCATATTTATAGGGAAGGCAATAAAGTTGCTGATAGATTTGCTTCCATTGGTCATCGTTGTAAGAAGCTTGAAATTTGGAGGGAACTTCCTCCATTAGAGACTTTGGATGTGATGCGTCATGATGCTGAGGGGAAGATTACTTTTAGGAGAAAATAA

Coding sequence (CDS)

ATGTTTAACATTTTCAAATCCTCCAATTACCAAATCATCCGTTCAAAATCATTATTAGCAGCAAGAGAATTGCACAAACGACCGATACCAATTCCAGTGGCATGGACAAGGCCAGAATTTGGATGGACAAAGCTGAATTTCGATGGCTCTTCAAAAGGGGAAATAGGACCCGGTGTGGCCAGCATTGGGGGTGTTTTAAGAGACCACAAGGCCCAGTTTTTGTTAGGATATGCAGAGCCCATAGGCAGAGCCTATAGCTCCATGGCTGAACTTACAGCACTTACCAAAGGCTTGGAATTGGTCCTTGAAAATGGGTGGAAGGATGTTTGGGTTGAAGGAGATGCTAAGGGATTGGTGGAAATACTAGCTGAGAATAGAGAGGTTAAATGTATGGAAGCTCGAAGTTATTTTAGGCACATAAAATCTTTATTACTTGATTTTGATAATTGTAAAGTTAGTCATATTTATAGGGAAGGTAATAAAGTTGCTGATAGATTTGCTTCCATTGGTCATCGTTGTAAGAAGCTTGAAATTTGGAGGGAACTTCCTCCATTGGAGACTTTGGATATGATACGTCATGATGCTGAGGGGAAGATTACTTTTAGGAGAAGGTTGCTTCTGGGAATTGAAGTAGACGGCGGCAACAGGAAGTCCGAGGGCATTCTGCCAGAATTTGGATGGACAAAGCTGAATTTCGATGGCTCTTCAAAAGGGGAAATAGGACCCGGTGTGGCGAGCATTGGGGGCGTTTTAAGAGACCACAAGGCCCAGTTTTTGTTAGGATATGCAGAGCCCATAGGCAGAGCCAACAGCGCCATGGCTGAACTTACAGCACTTACCAAAGGCTTGGAATTGGTCCTTGAAAATGGGTGGAAGGATGTTTGGGTTGAAGGAGACGCTAAGGGATTGGTGGAAATAGTAGCTGAGAATAAAGAGGTTAAACGTGTGGAAGCTCGAAGTTATTTTAGGCACATAAAATCTTTAATACATGATTTTGATAATTGTAAAGTTAGTCATATTTATAGGGAAGGCAATAAAGTTGCTGATAGATTTGCTTCCATTGGTCATCGTTGTAAGAAGCTTGAAATTTGGAGGGAACTTCCTCCATTAGAGACTTTGGATGTGATGCGTCATGATGCTGAGGGGAAGATTACTTTTAGGAGAAAATAA

Protein sequence

MFNIFKSSNYQIIRSKSLLAARELHKRPIPIPVAWTRPEFGWTKLNFDGSSKGEIGPGVASIGGVLRDHKAQFLLGYAEPIGRAYSSMAELTALTKGLELVLENGWKDVWVEGDAKGLVEILAENREVKCMEARSYFRHIKSLLLDFDNCKVSHIYREGNKVADRFASIGHRCKKLEIWRELPPLETLDMIRHDAEGKITFRRRLLLGIEVDGGNRKSEGILPEFGWTKLNFDGSSKGEIGPGVASIGGVLRDHKAQFLLGYAEPIGRANSAMAELTALTKGLELVLENGWKDVWVEGDAKGLVEIVAENKEVKRVEARSYFRHIKSLIHDFDNCKVSHIYREGNKVADRFASIGHRCKKLEIWRELPPLETLDVMRHDAEGKITFRRK*

Homology

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BLAST of Chy12G215830 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.5e-12
Identity = 53/172 (30.81%), Postives = 79/172 (45.93%), Query Frame = 0


Query: 33  VAWTRPEFGWTKLNFDGSSKGEIGPGVASIGGVLRDHKAQFLLGYAEPIGRAYSSMAELT 92
           + W  P  GW K+N DG+S+G   PG+AS GGVLRD    +  G++  IGR  +  AEL 
Sbjct: 450 IGWVSPCVGWVKVNTDGASRG--NPGLASAGGVLRDCTGAWCGGFSLNIGRCSAPQAELW 509

Query: 93  ALTKGLELVLENGWKDVWVEGDAKGLVEILAENREVKCMEARSYFRHIKSLLLDFD-NCK 152
            +  GL    E     V +E D++ +V  L     +      S+   +    L  D   +
Sbjct: 510 GVYYGLYFAWEKKVPRVELEVDSEVIVGFLKTG--ISDSHPLSFLVRLCHGFLQKDWLVR 569

Query: 153 VSHIYREGNKVADRFASIGHRCKKLEIWRELPPLETLDMIRHDAEGKITFRR 204
           + H+YRE N++AD  A+            +L P     ++R D  G    RR
Sbjct: 570 IVHVYREANRLADGLANYAFSLSLGFHSFDLVPDAMSSLLREDTLGSTRPRR 617

[Close]

BLAST of Chy12G215830 vs. ExPASy TrEMBL
Match: A0A5N5FDC4 (Ribonuclease H protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_002124 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 2.5e-111
Identity = 196/383 (51.17%), Postives = 276/383 (72.06%), Query Frame = 0


Query: 11  QIIRSKSLLAARELHKRPIPIPVAWTRPEFGWTKLNFDGSSKGEIGPGVASIGGVLRDHK 70
           ++I+ + +   R LHK    IPV+W +P+ GWTKLNFDGSSK E+G   ASIGG+ R+HK
Sbjct: 12  KLIQQRPVCLFRSLHKE--SIPVSWEKPKIGWTKLNFDGSSKPEVGK--ASIGGLFRNHK 71

Query: 71  AQFLLGYAEPIGRAYSSMAELTALTKGLELVLENGWKDVWVEGDAKGLVEILAENREVKC 130
           A+FLLGYAE IG+A S +AEL AL +GLELVLENGW DVW+EGDAK L++I+A+ R+++C
Sbjct: 72  AEFLLGYAESIGKANSIIAELAALRRGLELVLENGWSDVWLEGDAKTLLQIIAQRRQIRC 131

Query: 131 MEARSYFRHIKSLLLDFDNCKVSHIYREGNKVADRFASIGHRCKKLEIWRELPPLETLDM 190
            EA+     IK ++ + +NC ++H+YREGN+ AD+FA +GH     +IW+ +PP E L +
Sbjct: 132 AEAQRQISDIKLIIPEINNCVLTHVYREGNRAADKFAKLGHCYGTPQIWQHIPPDEVLSI 191

Query: 191 IRHDAEGKITFRRRLLLGIEVDGGNRKSEGI---LPEFGWTKLNFDGSSKGEIGPGVASI 250
           ++ DAE ++ F ++L         ++K++ +    P+ GWTKLNFDGSSKG+ G   ASI
Sbjct: 192 VQEDAEARLVFSKKL---------SKKADSVKWEKPKIGWTKLNFDGSSKGKTGK--ASI 251

Query: 251 GGVLRDHKAQFLLGYAEPIGRANSAMAELTALTKGLELVLENGWKDVWVEGDAKGLVEIV 310
           GGV R+HKA+FLLG+AE IG ANS +AEL AL +GLELVLENG++DVW+EGDAK L++I+
Sbjct: 252 GGVFRNHKAEFLLGFAESIGEANSTIAELAALKRGLELVLENGFRDVWLEGDAKALLDII 311

Query: 311 AE-NKEVKRVEARSYFRHIKSLIHDFDNCKVSHIYREGNKVADRFASIGHRCKKLEIWRE 370
            +  K+ K VE +     + S++   + C VSH+YREGN+ AD+FA IGH+ ++  IW  
Sbjct: 312 VKRKKDFKCVEVQRQVSDVNSILPKLNGCIVSHVYREGNRAADKFAQIGHQLEEPRIWWN 371

Query: 371 LPPLETLDVMRHDAEGKITFRRK 390
           +PP E + ++  DAEGKI  RR+
Sbjct: 372 VPPDEVVAIVHEDAEGKIVLRRR 379

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BLAST of Chy12G215830 vs. ExPASy TrEMBL
Match: A0A0A0LUF5 (RNase H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G071820 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 8.1e-110
Identity = 199/205 (97.07%), Postives = 200/205 (97.56%), Query Frame = 0


Query: 1   MFNIFKSSNYQIIRSKS-LLAARELHKRPIPIPVAWTRPEFGWTKLNFDGSSKGEIGPGV 60
           MFNIFKSSNYQII SKS LLAARELHKRPIPIPVAWTRPEFGWTKLNFDGSSKGEIGPGV
Sbjct: 1   MFNIFKSSNYQIIISKSLLLAARELHKRPIPIPVAWTRPEFGWTKLNFDGSSKGEIGPGV 60

Query: 61  ASIGGVLRDHKAQFLLGYAEPIGRAYSSMAELTALTKGLELVLENGWKDVWVEGDAKGLV 120
           ASIGGVLRDHKAQFLLGYAE IGRAYSSMAEL ALTKGLELVLENGWKDVWVEGDAKGLV
Sbjct: 61  ASIGGVLRDHKAQFLLGYAESIGRAYSSMAELKALTKGLELVLENGWKDVWVEGDAKGLV 120

Query: 121 EILAENREVKCMEARSYFRHIKSLLLDFDNCKVSHIYREGNKVADRFASIGHRCKKLEIW 180
           EILAENREVKCMEARSY RHIKSLLLDFDNCKVSHIYREGNKVADRFASIGHRCKKLEIW
Sbjct: 121 EILAENREVKCMEARSYLRHIKSLLLDFDNCKVSHIYREGNKVADRFASIGHRCKKLEIW 180

Query: 181 RELPPLETLDMIRHDAEGKITFRRR 205
           RELPPLETLDM+RHDAEGKITFRRR
Sbjct: 181 RELPPLETLDMMRHDAEGKITFRRR 205

[Close]

BLAST of Chy12G215830 vs. ExPASy TrEMBL
Match: A0A5D3DS33 (Putative ribonuclease H protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00240 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 6.4e-99
Identity = 178/203 (87.68%), Postives = 189/203 (93.10%), Query Frame = 0


Query: 1   MFNIFKSSNYQIIRSKSLLAARELHKRPIPIPVAWTRPEFGWTKLNFDGSSKGEIGPGVA 60
           MFNI KS NYQ IRSKSLLAAR+LHK+P PIPVAW RPE GWTKLNFDGSSKG+  PG+A
Sbjct: 1   MFNILKSLNYQNIRSKSLLAARQLHKQPKPIPVAWRRPEIGWTKLNFDGSSKGDKAPGLA 60

Query: 61  SIGGVLRDHKAQFLLGYAEPIGRAYSSMAELTALTKGLELVLENGWKDVWVEGDAKGLVE 120
           SIGGVLRDHKAQFLLGYAE IGRA S+MAELTALTKGLELVLENGWKDVWVEGD KGLVE
Sbjct: 61  SIGGVLRDHKAQFLLGYAEAIGRANSAMAELTALTKGLELVLENGWKDVWVEGDDKGLVE 120

Query: 121 ILAENREVKCMEARSYFRHIKSLLLDFDNCKVSHIYREGNKVADRFASIGHRCKKLEIWR 180
           ILA+N+EVKC+E RSYFR+IKSL+LD DNCKVSHIYREGNKVADRFASIGHR KKLEIWR
Sbjct: 121 ILADNKEVKCVETRSYFRYIKSLILDLDNCKVSHIYREGNKVADRFASIGHRYKKLEIWR 180

Query: 181 ELPPLETLDMIRHDAEGKITFRR 204
           ELPPLETLDM+RHDAEGKITFRR
Sbjct: 181 ELPPLETLDMMRHDAEGKITFRR 203

[Close]

BLAST of Chy12G215830 vs. ExPASy TrEMBL
Match: A0A5A7R6V1 (Polynucleotidyl transferase OS=Striga asiatica OX=4170 GN=STAS_30494 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 3.5e-81
Identity = 178/476 (37.39%), Postives = 242/476 (50.84%), Query Frame = 0


Query: 22  RELHKRPIPIPVAWTRPEFGWTKLNFDGSSKGEIGPGVASIGGVLRDHKAQFLLGYAEPI 81
           R  HK    I V W RPE GWTKLN+DGS K E G   +SIGG+ RDH A FLLGYAE I
Sbjct: 23  RHCHKE--AINVKWARPEKGWTKLNYDGSCKCETGK--SSIGGIFRDHNAGFLLGYAESI 82

Query: 82  GRAYSSMAELTALTKGLELVLENGWKDVWVEGDAKGLVEILAENREVKCMEARSYFRHIK 141
           G++ S++AEL AL +GLE+VLENGW +VW+EGD K + +I+   + V             
Sbjct: 83  GQSSSTLAELAALVRGLEIVLENGWSNVWLEGDYKDMADIITRKKRV------------- 142

Query: 142 SLLLDFDNCKVSHIYREGNKVADRFASIGHRCKKLEIWRELPPLETLDMIRHDAEGKITF 201
                          +EGN+ AD+FA +GH   K ++W+ +PP E L ++  DAEGK TF
Sbjct: 143 --------------IKEGNRAADKFAQMGHTLTKPQVWKHVPPNEVLRIVNGDAEGK-TF 202

Query: 202 -----------------------------RRRLLLGIEVD-----------------GGN 261
                                         R+L+L I  D                 G N
Sbjct: 203 IDCAWRLCKFEFMKLSRYHEKKCGKRKAKYRKLVLEISDDRPSAGEDSDSGESFVGQGIN 262

Query: 262 RKSEGIL----------------------------------------------------- 321
           +  E ++                                                     
Sbjct: 263 KLKEELVEDNPVEDNFTKPAAESSKVLGLAVANRELSNNNNIVDDLVYMGFDVEMQWHKE 322

Query: 322 --------PEFGWTKLNFDGSSKGEIGPGVASIGGVLRDHKAQFLLGYAEPIGRANSAMA 381
                   PE GWTKLN+DGS K + G   +SIGG+ RDH A FLLGYAE IG++NS +A
Sbjct: 323 AVNVTWARPEHGWTKLNYDGSCKCKTGE--SSIGGIFRDHNACFLLGYAESIGQSNSTLA 382

Query: 382 ELTALTKGLELVLENGWKDVWVEGDAKGLVEIVAENKEVKR-VEARSYFRHIKSLIHDFD 390
           EL AL +GLE+VLENGW DVW+EGD+KG+V+I+   K V R  + R++   +  ++ +  
Sbjct: 383 ELAALVRGLEIVLENGWSDVWLEGDSKGIVDIITRKKGVIRCAQVRAHVARVNLMVPEIK 442

[Close]

BLAST of Chy12G215830 vs. ExPASy TrEMBL
Match: A0A803LL45 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.2e-60
Identity = 143/374 (38.24%), Postives = 197/374 (52.67%), Query Frame = 0


Query: 15  SKSLLAARELHKRPIPIPVAWTRPEFGWTKLNFDGSSKGEIGPGVASIGGVLRDHKAQFL 74
           S  LL  R+ H   + IPVAW +P+ G TKLNFDGSSKG+ G   ASIGGV RDH A+F+
Sbjct: 21  SVGLLLVRKKHN--LAIPVAWEKPKVGCTKLNFDGSSKGKCGK--ASIGGVFRDHNAKFV 80

Query: 75  LGYAEPIGRAYSSMAELTALTKGLELVLENGWKDVWVEGDAKGLVEILAENREVKCMEAR 134
           LGYA+ I  + S++AEL AL +GLELVLENGW DVW+EGDAK LV I+ + R +K +EA+
Sbjct: 81  LGYAQSIKNSDSTIAELAALLRGLELVLENGWTDVWLEGDAKALVNIIVKRRSMKSLEAQ 140

Query: 135 SYFRHIKSLLLDFDNCKVSHIYREGNKVADRFASIGHRCKKLEIWRELPPLETLDMIRHD 194
                                     ++  ++ S                          
Sbjct: 141 --------------------------RINAQYPS-------------------------- 200

Query: 195 AEGKITFRRRLLLGIEVDGGNRKSEGILPEFGWTKLNFDGSSKGEIGPGVASIGGVLRDH 254
           A G +  R +  L I V               W                           
Sbjct: 201 AVGLLLVRNQHKLSIPV--------------SW--------------------------E 260

Query: 255 KAQFLLGYAEPIGRANSAMAELTALTKGLELVLENGWKDVWVEGDAKGLVEIVAENKEVK 314
           K +F+LGYAE I  +++ +AEL AL +GLEL++ENGW +VW+EG+A+ LV ++ + + +K
Sbjct: 261 KPKFVLGYAESIESSDNTIAELAALLRGLELIVENGWTNVWLEGNAEALVNMIVQRRTIK 296

Query: 315 RVEARSYFRHIKSLIHDFDNCKVSHIYREGNKVADRFASIGHRCKKLEIWRELPPLETLD 374
             +A+ Y   I ++I   +NC ++HIYREGN+ AD+FA IGH  +K  IWR  PP E L 
Sbjct: 321 SSKAQRYVSRINTIIPKINNCTMTHIYREGNRAADKFAEIGHNLEKPRIWRHAPPNEVLP 296

Query: 375 VMRHDAEGKITFRR 389
             + DA+GKI  RR
Sbjct: 381 --QDDAKGKIVLRR 296

[Close]

BLAST of Chy12G215830 vs. NCBI nr
Match: KAE8652698.1 (hypothetical protein Csa_013405 [Cucumis sativus])

HSP 1 Score: 403 bits (1036), Expect = 2.49e-138
Identity = 200/209 (95.69%), Postives = 202/209 (96.65%), Query Frame = 0


Query: 1   MFNIFKSSNYQIIRSKSLL-AARELHKRPIPIPVAWTRPEFGWTKLNFDGSSKGEIGPGV 60
           MFNIFKSSNYQII SKSLL AARELHKRPIPIPVAWTRPEFGWTKLNFDGSSKGEIGPGV
Sbjct: 1   MFNIFKSSNYQIIISKSLLLAARELHKRPIPIPVAWTRPEFGWTKLNFDGSSKGEIGPGV 60

Query: 61  ASIGGVLRDHKAQFLLGYAEPIGRAYSSMAELTALTKGLELVLENGWKDVWVEGDAKGLV 120
           ASIGGVLRDHKAQFLLGYAE IGRAYSSMAEL ALTKGLELVLENGWKDVWVEGDAKGLV
Sbjct: 61  ASIGGVLRDHKAQFLLGYAESIGRAYSSMAELKALTKGLELVLENGWKDVWVEGDAKGLV 120

Query: 121 EILAENREVKCMEARSYFRHIKSLLLDFDNCKVSHIYREGNKVADRFASIGHRCKKLEIW 180
           EILAENREVKCMEARSY RHIKSLLLDFDNCKVSHIYREGNKVADRFASIGHRCKKLEIW
Sbjct: 121 EILAENREVKCMEARSYLRHIKSLLLDFDNCKVSHIYREGNKVADRFASIGHRCKKLEIW 180

Query: 181 RELPPLETLDMIRHDAEGKITFRRRLLLG 208
           RELPPLETLDM+RHDAEGKITFRRR + G
Sbjct: 181 RELPPLETLDMMRHDAEGKITFRRRCVYG 209

[Close]

BLAST of Chy12G215830 vs. NCBI nr
Match: KAB2601119.1 (ribonuclease H protein [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 402 bits (1032), Expect = 2.69e-135
Identity = 196/383 (51.17%), Postives = 276/383 (72.06%), Query Frame = 0


Query: 11  QIIRSKSLLAARELHKRPIPIPVAWTRPEFGWTKLNFDGSSKGEIGPGVASIGGVLRDHK 70
           ++I+ + +   R LHK  IP  V+W +P+ GWTKLNFDGSSK E+G   ASIGG+ R+HK
Sbjct: 12  KLIQQRPVCLFRSLHKESIP--VSWEKPKIGWTKLNFDGSSKPEVGK--ASIGGLFRNHK 71

Query: 71  AQFLLGYAEPIGRAYSSMAELTALTKGLELVLENGWKDVWVEGDAKGLVEILAENREVKC 130
           A+FLLGYAE IG+A S +AEL AL +GLELVLENGW DVW+EGDAK L++I+A+ R+++C
Sbjct: 72  AEFLLGYAESIGKANSIIAELAALRRGLELVLENGWSDVWLEGDAKTLLQIIAQRRQIRC 131

Query: 131 MEARSYFRHIKSLLLDFDNCKVSHIYREGNKVADRFASIGHRCKKLEIWRELPPLETLDM 190
            EA+     IK ++ + +NC ++H+YREGN+ AD+FA +GH     +IW+ +PP E L +
Sbjct: 132 AEAQRQISDIKLIIPEINNCVLTHVYREGNRAADKFAKLGHCYGTPQIWQHIPPDEVLSI 191

Query: 191 IRHDAEGKITFRRRLLLGIEVDGGNRKSEGIL---PEFGWTKLNFDGSSKGEIGPGVASI 250
           ++ DAE ++ F ++L         ++K++ +    P+ GWTKLNFDGSSKG+ G   ASI
Sbjct: 192 VQEDAEARLVFSKKL---------SKKADSVKWEKPKIGWTKLNFDGSSKGKTGK--ASI 251

Query: 251 GGVLRDHKAQFLLGYAEPIGRANSAMAELTALTKGLELVLENGWKDVWVEGDAKGLVEIV 310
           GGV R+HKA+FLLG+AE IG ANS +AEL AL +GLELVLENG++DVW+EGDAK L++I+
Sbjct: 252 GGVFRNHKAEFLLGFAESIGEANSTIAELAALKRGLELVLENGFRDVWLEGDAKALLDII 311

Query: 311 AENK-EVKRVEARSYFRHIKSLIHDFDNCKVSHIYREGNKVADRFASIGHRCKKLEIWRE 370
            + K + K VE +     + S++   + C VSH+YREGN+ AD+FA IGH+ ++  IW  
Sbjct: 312 VKRKKDFKCVEVQRQVSDVNSILPKLNGCIVSHVYREGNRAADKFAQIGHQLEEPRIWWN 371

Query: 371 LPPLETLDVMRHDAEGKITFRRK 389
           +PP E + ++  DAEGKI  RR+
Sbjct: 372 VPPDEVVAIVHEDAEGKIVLRRR 379

[Close]

BLAST of Chy12G215830 vs. NCBI nr
Match: KAA0056936.1 (putative ribonuclease H protein [Cucumis melo var. makuwa] >TYK26364.1 putative ribonuclease H protein [Cucumis melo var. makuwa])

HSP 1 Score: 365 bits (937), Expect = 1.54e-123
Identity = 178/203 (87.68%), Postives = 189/203 (93.10%), Query Frame = 0


Query: 1   MFNIFKSSNYQIIRSKSLLAARELHKRPIPIPVAWTRPEFGWTKLNFDGSSKGEIGPGVA 60
           MFNI KS NYQ IRSKSLLAAR+LHK+P PIPVAW RPE GWTKLNFDGSSKG+  PG+A
Sbjct: 1   MFNILKSLNYQNIRSKSLLAARQLHKQPKPIPVAWRRPEIGWTKLNFDGSSKGDKAPGLA 60

Query: 61  SIGGVLRDHKAQFLLGYAEPIGRAYSSMAELTALTKGLELVLENGWKDVWVEGDAKGLVE 120
           SIGGVLRDHKAQFLLGYAE IGRA S+MAELTALTKGLELVLENGWKDVWVEGD KGLVE
Sbjct: 61  SIGGVLRDHKAQFLLGYAEAIGRANSAMAELTALTKGLELVLENGWKDVWVEGDDKGLVE 120

Query: 121 ILAENREVKCMEARSYFRHIKSLLLDFDNCKVSHIYREGNKVADRFASIGHRCKKLEIWR 180
           ILA+N+EVKC+E RSYFR+IKSL+LD DNCKVSHIYREGNKVADRFASIGHR KKLEIWR
Sbjct: 121 ILADNKEVKCVETRSYFRYIKSLILDLDNCKVSHIYREGNKVADRFASIGHRYKKLEIWR 180

Query: 181 ELPPLETLDMIRHDAEGKITFRR 203
           ELPPLETLDM+RHDAEGKITFRR
Sbjct: 181 ELPPLETLDMMRHDAEGKITFRR 203

[Close]

BLAST of Chy12G215830 vs. NCBI nr
Match: KAG6584039.1 (putative ribonuclease H protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 311 bits (796), Expect = 4.34e-102
Identity = 147/199 (73.87%), Postives = 176/199 (88.44%), Query Frame = 0


Query: 4   IFKSSNYQIIRSKSLLAARELHKRPIPIPVAWTRPEFGWTKLNFDGSSKGEIGPGVASIG 63
           + K  NYQI R ++LL AR+ HK+PIP  VAW RP+ GWTKLNFDGSS+G++ PG ASIG
Sbjct: 7   MLKCPNYQINRIRALLLARQCHKQPIP--VAWKRPDIGWTKLNFDGSSRGKMSPGRASIG 66

Query: 64  GVLRDHKAQFLLGYAEPIGRAYSSMAELTALTKGLELVLENGWKDVWVEGDAKGLVEILA 123
           GVLRDH+AQFLLGYAEPIGRA S++AELTAL+KGLELVLENGWKDVW+EGDAKGL+EI+ 
Sbjct: 67  GVLRDHQAQFLLGYAEPIGRANSTIAELTALSKGLELVLENGWKDVWLEGDAKGLIEIIV 126

Query: 124 ENREVKCMEARSYFRHIKSLLLDFDNCKVSHIYREGNKVADRFASIGHRCKKLEIWRELP 183
             ++ KC+EARS FR+I SL+LD +NCKVSHIYREGN+VA+RFASIGHR KKLE+WR++P
Sbjct: 127 GKKKAKCVEARSQFRYINSLILDLNNCKVSHIYREGNRVANRFASIGHRYKKLEVWRDIP 186

Query: 184 PLETLDMIRHDAEGKITFR 202
           PLETLDM+R DAEGKI+FR
Sbjct: 187 PLETLDMMREDAEGKISFR 203

[Close]

BLAST of Chy12G215830 vs. NCBI nr
Match: GER53010.1 (polynucleotidyl transferase [Striga asiatica])

HSP 1 Score: 302 bits (774), Expect = 3.63e-95
Identity = 178/476 (37.39%), Postives = 242/476 (50.84%), Query Frame = 0


Query: 22  RELHKRPIPIPVAWTRPEFGWTKLNFDGSSKGEIGPGVASIGGVLRDHKAQFLLGYAEPI 81
           R  HK  I   V W RPE GWTKLN+DGS K E G   +SIGG+ RDH A FLLGYAE I
Sbjct: 23  RHCHKEAIN--VKWARPEKGWTKLNYDGSCKCETGK--SSIGGIFRDHNAGFLLGYAESI 82

Query: 82  GRAYSSMAELTALTKGLELVLENGWKDVWVEGDAKGLVEILAENREVKCMEARSYFRHIK 141
           G++ S++AEL AL +GLE+VLENGW +VW+EGD K + +I+   + V             
Sbjct: 83  GQSSSTLAELAALVRGLEIVLENGWSNVWLEGDYKDMADIITRKKRV------------- 142

Query: 142 SLLLDFDNCKVSHIYREGNKVADRFASIGHRCKKLEIWRELPPLETLDMIRHDAEGKITF 201
                          +EGN+ AD+FA +GH   K ++W+ +PP E L ++  DAEGK TF
Sbjct: 143 --------------IKEGNRAADKFAQMGHTLTKPQVWKHVPPNEVLRIVNGDAEGK-TF 202

Query: 202 -----------------------------RRRLLLGIEVD-----------------GGN 261
                                         R+L+L I  D                 G N
Sbjct: 203 IDCAWRLCKFEFMKLSRYHEKKCGKRKAKYRKLVLEISDDRPSAGEDSDSGESFVGQGIN 262

Query: 262 RKSEGIL----------------------------------------------------- 321
           +  E ++                                                     
Sbjct: 263 KLKEELVEDNPVEDNFTKPAAESSKVLGLAVANRELSNNNNIVDDLVYMGFDVEMQWHKE 322

Query: 322 --------PEFGWTKLNFDGSSKGEIGPGVASIGGVLRDHKAQFLLGYAEPIGRANSAMA 381
                   PE GWTKLN+DGS K + G   +SIGG+ RDH A FLLGYAE IG++NS +A
Sbjct: 323 AVNVTWARPEHGWTKLNYDGSCKCKTGE--SSIGGIFRDHNACFLLGYAESIGQSNSTLA 382

Query: 382 ELTALTKGLELVLENGWKDVWVEGDAKGLVEIVAENKEVKR-VEARSYFRHIKSLIHDFD 389
           EL AL +GLE+VLENGW DVW+EGD+KG+V+I+   K V R  + R++   +  ++ +  
Sbjct: 383 ELAALVRGLEIVLENGWSDVWLEGDSKGIVDIITRKKGVIRCAQVRAHVARVNLMVPEIK 442

[Close]

BLAST of Chy12G215830 vs. TAIR 10
Match: AT2G46460.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 1.2e-12
Identity = 42/136 (30.88%), Postives = 69/136 (50.74%), Query Frame = 0


Query: 33  VAWTRPEFGWTKLNFDGSSKGEIGPGVASIGGVLRDHKAQFL-LGYAEPIGRAYSSMAEL 92
           + WTRP  GW K N+DGS   E+    +  G ++RD   QF+  G A     + +  +E 
Sbjct: 1   MGWTRPPHGWKKCNYDGSYNREM---PSKAGWIIRDESGQFVSAGQATGNHTSNALESEF 60

Query: 93  TALTKGLELVLENGWKDVWVEGDAKGLVEILAENREVKCMEARSYFRHIKSLLLDFDNCK 152
            AL   ++    +G + +W EGD + ++EIL  NR     +  ++ R +++    F  C+
Sbjct: 61  QALLITMQSCWSHGHRKIWFEGDNREVMEIL--NRRKSRFDIFNWIRDVQAWKQRFQECR 120

Query: 153 VSHIYREGNKVADRFA 168
            + I R+ NK AD  A
Sbjct: 121 FTWINRKQNKPADILA 131

[Close]

BLAST of Chy12G215830 vs. TAIR 10
Match: AT1G04625.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 1.4e-10
Identity = 43/140 (30.71%), Postives = 64/140 (45.71%), Query Frame = 0


Query: 30  PIPVAWTRPEFGWTKLNFDGSSKGEIGPGVASIGGVLRDHKAQFLLGYAEPIGRAYSS-- 89
           P    WT P  GWTK N+DG+         +  G +LRD +  F LG A  IG   ++  
Sbjct: 77  PTANLWTTPPIGWTKCNYDGTYHSN---APSKAGWLLRDDRGTF-LGAAHAIGSITTNPM 136

Query: 90  MAELTALTKGLELVLENGWKDVWVEGDAKGLVEILAENREVKCMEARSYFRHIKSLLLDF 149
            +EL AL   ++     G++ ++ EGD K + EI+  N         ++ R I +    F
Sbjct: 137 ESELQALVMAMQHCWSRGYRKIYFEGDNKEVSEIV--NGRSSNFAVFNWIRDISAWRSKF 196

Query: 150 DNCKVSHIYREGNKVADRFA 168
           + CK +   R  N  AD  A
Sbjct: 197 EECKFTWTRRFSNMAADALA 210

[Close]

BLAST of Chy12G215830 vs. TAIR 10
Match: AT3G01410.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 3.2e-10
Identity = 42/124 (33.87%), Postives = 60/124 (48.39%), Query Frame = 0


Query: 230 LNFDGSSKGEIGPGVASIGGVLRDHKAQFLLGYAEPIGRANSAMAELTALTKGLELVLEN 289
           + FDG+SKG   PG A  G VLR      L    E +G A + +AE  AL  GL   L+ 
Sbjct: 157 IEFDGASKG--NPGKAGAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLRSALDK 216

Query: 290 GWKDVWVEGDAKGLVEIVAENKEVKRVEARSYFRHIKSLIHDFDNCKVSHIYREGNKVAD 349
           G+K+V V GD+  +   V    +    +     +  K L++ F    + HI RE N  AD
Sbjct: 217 GFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEAD 276

Query: 350 RFAS 354
           + A+
Sbjct: 277 KQAN 278

[Close]

BLAST of Chy12G215830 vs. TAIR 10
Match: AT3G01410.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 3.2e-10
Identity = 42/124 (33.87%), Postives = 60/124 (48.39%), Query Frame = 0


Query: 230 LNFDGSSKGEIGPGVASIGGVLRDHKAQFLLGYAEPIGRANSAMAELTALTKGLELVLEN 289
           + FDG+SKG   PG A  G VLR      L    E +G A + +AE  AL  GL   L+ 
Sbjct: 157 IEFDGASKG--NPGKAGAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLRSALDK 216

Query: 290 GWKDVWVEGDAKGLVEIVAENKEVKRVEARSYFRHIKSLIHDFDNCKVSHIYREGNKVAD 349
           G+K+V V GD+  +   V    +    +     +  K L++ F    + HI RE N  AD
Sbjct: 217 GFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEAD 276

Query: 350 RFAS 354
           + A+
Sbjct: 277 KQAN 278

[Close]

BLAST of Chy12G215830 vs. TAIR 10
Match: AT5G42905.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 5.5e-10
Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = 0


Query: 33  VAWTRPEFGWTKLNFDGSSKGEIGPGVASIGGVLRDHKAQFLLGYAEPIGRAYSSMAELT 92
           + W  P  GW K+N DG+S+G   PG+AS GGVLRD +  +  G++  IGR  +  AEL 
Sbjct: 138 IGWVLPCVGWVKVNTDGASRG--NPGLASAGGVLRDCEGAWCGGFSLNIGRCSAQHAELW 197

Query: 93  ALTKGLELVLENGWKDVWVEGDAKGLVEIL 123
            +  GL    E     V +E D++ +V  L
Sbjct: 198 GVYYGLYFAWEKKVPRVELEVDSEAIVGFL 225

The following BLAST results are available for this feature:

BLAST of Chy12G215830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C2F6	1.5e-12	30.81	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Chy12G215830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5N5FDC4	2.5e-111	51.17	Ribonuclease H protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674...	[more]
A0A0A0LUF5	8.1e-110	97.07	RNase H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G071820 PE=...	[more]
A0A5D3DS33	6.4e-99	87.68	Putative ribonuclease H protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7R6V1	3.5e-81	37.39	Polynucleotidyl transferase OS=Striga asiatica OX=4170 GN=STAS_30494 PE=4 SV=1	[more]
A0A803LL45	1.2e-60	38.24	Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1	[more]

BLAST of Chy12G215830 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652698.1	2.49e-138	95.69	hypothetical protein Csa_013405 [Cucumis sativus]	[more]
KAB2601119.1	2.69e-135	51.17	ribonuclease H protein [Pyrus ussuriensis x Pyrus communis]	[more]
KAA0056936.1	1.54e-123	87.68	putative ribonuclease H protein [Cucumis melo var. makuwa] >TYK26364.1 putative ...	[more]
KAG6584039.1	4.34e-102	73.87	putative ribonuclease H protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
GER53010.1	3.63e-95	37.39	polynucleotidyl transferase [Striga asiatica]	[more]

BLAST of Chy12G215830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46460.1	1.2e-12	30.88	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G04625.1	1.4e-10	30.71	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G01410.1	3.2e-10	33.87	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G01410.2	3.2e-10	33.87	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G42905.1	5.5e-10	38.89	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 46..168 e-value: 3.2E-30 score: 104.5 coord: 231..353 e-value: 5.4E-32 score: 110.2
IPR002156	Ribonuclease H domain	PROSITE	PS50879	RNASE_H	coord: 39..172 score: 11.092671
IPR002156	Ribonuclease H domain	PROSITE	PS50879	RNASE_H	coord: 224..357 score: 11.687107
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 42..171 e-value: 2.5E-23 score: 84.5 coord: 227..356 e-value: 7.0E-25 score: 89.6
None	No IPR available	PANTHER	PTHR47723:SF3	OS06G0683500 PROTEIN	coord: 11..198 coord: 221..383
None	No IPR available	PANTHER	PTHR47723	OS05G0353850 PROTEIN	coord: 11..198 coord: 221..383
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 45..167 e-value: 3.36063E-32 score: 115.874
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 230..352 e-value: 1.09244E-31 score: 114.719
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 40..167
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 225..352

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G215830.1	Chy12G215830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity