Chy12G215530 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G215530
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Protein of unknown function (DUF1218)
Location	chrH12: 14843111 .. 14844746 (-)
RNA-Seq Expression	Chy12G215530
Synteny	Chy12G215530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATGCTGGTTTTGATTGTGGTGTTTATCTTTGATCTCGTTGCTTTTGCACTTGCTGTTGCTGCAGAGCAGAGAAGAACTACTGTAAGTTTTGTGTATTTGTTGCAACTCTCTATTAATCATTTTTATTGTTTGATGAATGTTGTTTTTCTGAGCAGAATTGTTATTGGGAATTTGAAAGGGTTTGTGATTTTCATACTGGTTGTATAGAAATAAAGGCTTATTGATTTTTGGGTTTAGGTATATGTAGGTGGCTTTTGTATAGAAATGCTTTAGGTCACCAGTTTGTGACTGAATAGAAGAAATTTTGAACTCTGATGAACTCTACAAATCTTCAGACATCCAAACCATGTTTAAAATGTCATCTACCGGAGACGTAGCGGGAATTTTAGCAAACAAATTAGATTTTTTGTTTCTGCACCCTGTGGCCTGAAGTAGTTTTGAAGCCTTAGGTATCTAATTTTTGTGTTCTTTTTTTGTGTTTCTAATTTGAACCGTCCGTGAACAGCTTGGTATGTTAAGTTTCTAATCACGAGAGAACTGGAATATTATGATATTAGGACTCGTCATTCTGATCCTAATGTTATTTGGATGTGAAGAAGAAAGTGTTAGGGCACATAATGTGTGTATCTTATTCCTAAAAGCCTATTCTTCTTTGGCAGGCCTCAGTCGTTCAAACAGGCAATTCTAGATTCTGTGCCTATGATTCTGATATTGCAACTGGATTAGGTGTGGGTTCACTTTTGATCCTATTTGCTAGCCAAGTGATTTTAATGGTGGCAAGTCGATGTTTATGCTGTGGGAGAGGGTTGCGACCCGGTGGTTCAAGGGCTTGGGCAATTACACTTTTCATCACTTCCTGGTACATTTGATTGTTCAACCTTCAAATTTTACTAGTTTTGTTGTGATTGACTTTGAGTATGAGTTTACTCTGTTTTAGGATTTTAAACCACCTTCTTCCCTCTTAAAGGATAAGGTTGATAGGTCTAAGCCTGCCCCCTATATGATATCTCATGAAGTGGGAAAAGAAACCAACACAACACTCATTCGAGTATAACATAGCATTTTATACAAAGATTCCTGTTTGTTTAAATCTCTTAGAGGCATTTGGGTCCTTACTGGCTCTTCAATGTGTTACATAAATGGCCAAATAATCATTATAACCTGATTTCAAATGCTCACTTTATGTTAATCAAGATCATTTAACACAACATCAATGAAGCTCATTGATTACCTATAGAATTTGAACTAGAGTTTGTTTCGACCGACACTTGGTTATGATATGAGACAGTCATTTGTGTGTTTTTCAGTTTCTGAAGATCAAAATTGTACTCTAAACTTATGTTTCTGGTGGGTTGTATTGCTTGAACATTTCAGGATATGTTTTGCCATTGCTGAGATCTGTCTGCTGGCTGCATCGGTGCGAAATGCCTATCATACAAAATATGTTAGTTCTATTATTGACGAGCAGATTTCATGCAAGATGTTGAGGAGGGGAGTCTTTGGGGCCGGGGCTGCTTTTATCGTCTTCACATGTGTAGCATCAGAGCTGTTCTATGTTAGCTTTTCCAAGGCTCATGTCGAGACTTCCACCTTTGCCAAAGACACTGGCATTAGAATGGCAAACCTATAG

mRNA sequence

ATGGGTATGCTGGTTTTGATTGTGGTGTTTATCTTTGATCTCGTTGCTTTTGCACTTGCTGTTGCTGCAGAGCAGAGAAGAACTACTGCCTCAGTCGTTCAAACAGGCAATTCTAGATTCTGTGCCTATGATTCTGATATTGCAACTGGATTAGGTGTGGGTTCACTTTTGATCCTATTTGCTAGCCAAGTGATTTTAATGGTGGCAAGTCGATGTTTATGCTGTGGGAGAGGGTTGCGACCCGGTGGTTCAAGGGCTTGGGCAATTACACTTTTCATCACTTCCTGGATATGTTTTGCCATTGCTGAGATCTGTCTGCTGGCTGCATCGGTGCGAAATGCCTATCATACAAAATATGTTAGTTCTATTATTGACGAGCAGATTTCATGCAAGATGTTGAGGAGGGGAGTCTTTGGGGCCGGGGCTGCTTTTATCGTCTTCACATGTGTAGCATCAGAGCTGTTCTATGTTAGCTTTTCCAAGGCTCATGTCGAGACTTCCACCTTTGCCAAAGACACTGGCATTAGAATGGCAAACCTATAG

Coding sequence (CDS)

ATGGGTATGCTGGTTTTGATTGTGGTGTTTATCTTTGATCTCGTTGCTTTTGCACTTGCTGTTGCTGCAGAGCAGAGAAGAACTACTGCCTCAGTCGTTCAAACAGGCAATTCTAGATTCTGTGCCTATGATTCTGATATTGCAACTGGATTAGGTGTGGGTTCACTTTTGATCCTATTTGCTAGCCAAGTGATTTTAATGGTGGCAAGTCGATGTTTATGCTGTGGGAGAGGGTTGCGACCCGGTGGTTCAAGGGCTTGGGCAATTACACTTTTCATCACTTCCTGGATATGTTTTGCCATTGCTGAGATCTGTCTGCTGGCTGCATCGGTGCGAAATGCCTATCATACAAAATATGTTAGTTCTATTATTGACGAGCAGATTTCATGCAAGATGTTGAGGAGGGGAGTCTTTGGGGCCGGGGCTGCTTTTATCGTCTTCACATGTGTAGCATCAGAGCTGTTCTATGTTAGCTTTTCCAAGGCTCATGTCGAGACTTCCACCTTTGCCAAAGACACTGGCATTAGAATGGCAAACCTATAG

Protein sequence

MGMLVLIVVFIFDLVAFALAVAAEQRRTTASVVQTGNSRFCAYDSDIATGLGVGSLLILFASQVILMVASRCLCCGRGLRPGGSRAWAITLFITSWICFAIAEICLLAASVRNAYHTKYVSSIIDEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHVETSTFAKDTGIRMANL*

Homology

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BLAST of Chy12G215530 vs. ExPASy TrEMBL
Match: A0A0A0LV31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073650 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.3e-90
Identity = 177/180 (98.33%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MGMLVLIVVFIFDLVAFALAVAAEQRRTTASVVQTGNSRFCAYDSDIATGLGVGSLLILF 60
           MGMLVLIVVF+FDLVAFALAVAAEQRRTTASVVQTGNSRFCAYDSDIATGLGVGSLLILF
Sbjct: 1   MGMLVLIVVFVFDLVAFALAVAAEQRRTTASVVQTGNSRFCAYDSDIATGLGVGSLLILF 60

Query: 61  ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITSWICFAIAEICLLAASVRNAYHTKYV 120
           ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITSWICFAIAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITSWICFAIAEICLLAASVRNAYHTKYV 120

Query: 121 SSIIDEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHVETSTFAKDTGIRMANL 180
           SSIIDEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHVETS+FAKD+GIRMANL
Sbjct: 121 SSIIDEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHVETSSFAKDSGIRMANL 180

[Close]

BLAST of Chy12G215530 vs. ExPASy TrEMBL
Match: A0A1S3B5C0 (uncharacterized protein LOC103486188 OS=Cucumis melo OX=3656 GN=LOC103486188 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.2e-86
Identity = 169/180 (93.89%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MGMLVLIVVFIFDLVAFALAVAAEQRRTTASVVQTGNSRFCAYDSDIATGLGVGSLLILF 60
           MGMLVLIVVFIFDLVAFALAVAAEQRRTTA+V Q+GNSRFCAYDSDIATGLGVGS LILF
Sbjct: 1   MGMLVLIVVFIFDLVAFALAVAAEQRRTTATVAQSGNSRFCAYDSDIATGLGVGSFLILF 60

Query: 61  ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITSWICFAIAEICLLAASVRNAYHTKYV 120
           ASQVILMVASRCLCCGRGLRPGGSRAWAITLFIT WICFAIAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 120

Query: 121 SSIIDEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHVETSTFAKDTGIRMANL 180
           SSI++EQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAH+ET++FAKDTGIRMA+L
Sbjct: 121 SSIMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHIETNSFAKDTGIRMASL 180

[Close]

BLAST of Chy12G215530 vs. ExPASy TrEMBL
Match: A0A5A7UTY8 (DnaJ subfamily C member 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00600 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.2e-86
Identity = 169/180 (93.89%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MGMLVLIVVFIFDLVAFALAVAAEQRRTTASVVQTGNSRFCAYDSDIATGLGVGSLLILF 60
           MGMLVLIVVFIFDLVAFALAVAAEQRRTTA+V Q+GNSRFCAYDSDIATGLGVGS LILF
Sbjct: 1   MGMLVLIVVFIFDLVAFALAVAAEQRRTTATVAQSGNSRFCAYDSDIATGLGVGSFLILF 60

Query: 61  ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITSWICFAIAEICLLAASVRNAYHTKYV 120
           ASQVILMVASRCLCCGRGLRPGGSRAWAITLFIT WICFAIAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 120

Query: 121 SSIIDEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHVETSTFAKDTGIRMANL 180
           SSI++EQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAH+ET++FAKDTGIRMA+L
Sbjct: 121 SSIMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHIETNSFAKDTGIRMASL 180

[Close]

BLAST of Chy12G215530 vs. ExPASy TrEMBL
Match: A0A6J1CEZ1 (uncharacterized protein LOC111010632 OS=Momordica charantia OX=3673 GN=LOC111010632 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.3e-81
Identity = 157/180 (87.22%), Postives = 172/180 (95.56%), Query Frame = 0


Query: 1   MGMLVLIVVFIFDLVAFALAVAAEQRRTTASVVQTGNSRFCAYDSDIATGLGVGSLLILF 60
           M MLVL+VVF+FDLVAFALAVAAEQRRTTA+VVQ+GN+RFCAYDSDIATGLGVGSLL LF
Sbjct: 1   MAMLVLVVVFVFDLVAFALAVAAEQRRTTAAVVQSGNTRFCAYDSDIATGLGVGSLLFLF 60

Query: 61  ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITSWICFAIAEICLLAASVRNAYHTKYV 120
           ASQVI+MVASRCLCCG+ LRP GSRAWA+TLFIT W+CF IAE CLLAASVRNAYHTKY+
Sbjct: 61  ASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYM 120

Query: 121 SSIIDEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHVETSTFAKDTGIRMANL 180
           SSI++EQISCKMLR+GVFGAGAAFIVFTCVASELFYVSFSKAH +TS+FAKDTGIRMANL
Sbjct: 121 SSIVNEQISCKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL 180

[Close]

BLAST of Chy12G215530 vs. ExPASy TrEMBL
Match: A0A6J1GRF5 (uncharacterized protein LOC111456828 OS=Cucurbita moschata OX=3662 GN=LOC111456828 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.8e-81
Identity = 156/180 (86.67%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 1   MGMLVLIVVFIFDLVAFALAVAAEQRRTTASVVQTGNSRFCAYDSDIATGLGVGSLLILF 60
           MGMLV++VVF+ DLVAFALAVAAEQRRTTA+VVQ+GNS+FCAYDSDIATGLGVGSLL+LF
Sbjct: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60

Query: 61  ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITSWICFAIAEICLLAASVRNAYHTKYV 120
           ASQVI+MVASRCLCCG+ LRP GSRAWAITLFIT W+CF IAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFLIAEICLLAASVRNAYHTKYV 120

Query: 121 SSIIDEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHVETSTFAKDTGIRMANL 180
           SSI++E+ISCKMLRRGVFGAGAAFIVFTCVASELFY+SFSKAH +TS+FAKDTGIRMA++
Sbjct: 121 SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 180

[Close]

BLAST of Chy12G215530 vs. NCBI nr
Match: XP_004146593.1 (uncharacterized protein LOC101207266 [Cucumis sativus] >XP_011653089.1 uncharacterized protein LOC101207266 [Cucumis sativus] >KGN64657.1 hypothetical protein Csa_013398 [Cucumis sativus])

HSP 1 Score: 343 bits (881), Expect = 7.62e-119
Identity = 177/180 (98.33%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MGMLVLIVVFIFDLVAFALAVAAEQRRTTASVVQTGNSRFCAYDSDIATGLGVGSLLILF 60
           MGMLVLIVVF+FDLVAFALAVAAEQRRTTASVVQTGNSRFCAYDSDIATGLGVGSLLILF
Sbjct: 1   MGMLVLIVVFVFDLVAFALAVAAEQRRTTASVVQTGNSRFCAYDSDIATGLGVGSLLILF 60

Query: 61  ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITSWICFAIAEICLLAASVRNAYHTKYV 120
           ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITSWICFAIAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITSWICFAIAEICLLAASVRNAYHTKYV 120

Query: 121 SSIIDEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHVETSTFAKDTGIRMANL 180
           SSIIDEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHVETS+FAKD+GIRMANL
Sbjct: 121 SSIIDEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHVETSSFAKDSGIRMANL 180

[Close]

BLAST of Chy12G215530 vs. NCBI nr
Match: XP_008442281.1 (PREDICTED: uncharacterized protein LOC103486188 [Cucumis melo] >XP_016901058.1 PREDICTED: uncharacterized protein LOC103486188 [Cucumis melo] >KAA0056971.1 DnaJ subfamily C member 22 [Cucumis melo var. makuwa] >TYK26397.1 DnaJ subfamily C member 22 [Cucumis melo var. makuwa])

HSP 1 Score: 331 bits (849), Expect = 5.77e-114
Identity = 169/180 (93.89%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MGMLVLIVVFIFDLVAFALAVAAEQRRTTASVVQTGNSRFCAYDSDIATGLGVGSLLILF 60
           MGMLVLIVVFIFDLVAFALAVAAEQRRTTA+V Q+GNSRFCAYDSDIATGLGVGS LILF
Sbjct: 1   MGMLVLIVVFIFDLVAFALAVAAEQRRTTATVAQSGNSRFCAYDSDIATGLGVGSFLILF 60

Query: 61  ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITSWICFAIAEICLLAASVRNAYHTKYV 120
           ASQVILMVASRCLCCGRGLRPGGSRAWAITLFIT WICFAIAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 120

Query: 121 SSIIDEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHVETSTFAKDTGIRMANL 180
           SSI++EQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAH+ET++FAKDTGIRMA+L
Sbjct: 121 SSIMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHIETNSFAKDTGIRMASL 180

[Close]

BLAST of Chy12G215530 vs. NCBI nr
Match: XP_038905949.1 (uncharacterized protein LOC120091872 [Benincasa hispida] >XP_038905950.1 uncharacterized protein LOC120091872 [Benincasa hispida])

HSP 1 Score: 327 bits (838), Expect = 2.84e-112
Identity = 165/180 (91.67%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MGMLVLIVVFIFDLVAFALAVAAEQRRTTASVVQTGNSRFCAYDSDIATGLGVGSLLILF 60
           MGMLVLIVVFIFDLVAFALAVAAEQRRTTA+VVQ+G S+FCAYDSD+ATGLGVGSLLILF
Sbjct: 2   MGMLVLIVVFIFDLVAFALAVAAEQRRTTATVVQSGTSKFCAYDSDVATGLGVGSLLILF 61

Query: 61  ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITSWICFAIAEICLLAASVRNAYHTKYV 120
           ASQVI+MVASRCLCCGRGLRPGGSRAWAITLFIT WICFAIAEICLLAASVRNAYHTKYV
Sbjct: 62  ASQVIVMVASRCLCCGRGLRPGGSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 121

Query: 121 SSIIDEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHVETSTFAKDTGIRMANL 180
           SS+++EQISCKMLRRGVFGAGAAFIVFTC ASELFYVSFSKAH++TS+FAKDTGIRMA+L
Sbjct: 122 SSLMNEQISCKMLRRGVFGAGAAFIVFTCAASELFYVSFSKAHIQTSSFAKDTGIRMASL 181

[Close]

BLAST of Chy12G215530 vs. NCBI nr
Match: XP_022139805.1 (uncharacterized protein LOC111010632 [Momordica charantia] >XP_022139806.1 uncharacterized protein LOC111010632 [Momordica charantia] >XP_022139807.1 uncharacterized protein LOC111010632 [Momordica charantia])

HSP 1 Score: 315 bits (808), Expect = 1.03e-107
Identity = 157/180 (87.22%), Postives = 172/180 (95.56%), Query Frame = 0


Query: 1   MGMLVLIVVFIFDLVAFALAVAAEQRRTTASVVQTGNSRFCAYDSDIATGLGVGSLLILF 60
           M MLVL+VVF+FDLVAFALAVAAEQRRTTA+VVQ+GN+RFCAYDSDIATGLGVGSLL LF
Sbjct: 1   MAMLVLVVVFVFDLVAFALAVAAEQRRTTAAVVQSGNTRFCAYDSDIATGLGVGSLLFLF 60

Query: 61  ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITSWICFAIAEICLLAASVRNAYHTKYV 120
           ASQVI+MVASRCLCCG+ LRP GSRAWA+TLFIT W+CF IAE CLLAASVRNAYHTKY+
Sbjct: 61  ASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYM 120

Query: 121 SSIIDEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHVETSTFAKDTGIRMANL 180
           SSI++EQISCKMLR+GVFGAGAAFIVFTCVASELFYVSFSKAH +TS+FAKDTGIRMANL
Sbjct: 121 SSIVNEQISCKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL 180

[Close]

BLAST of Chy12G215530 vs. NCBI nr
Match: XP_022954617.1 (uncharacterized protein LOC111456828 [Cucurbita moschata] >XP_022954618.1 uncharacterized protein LOC111456828 [Cucurbita moschata])

HSP 1 Score: 314 bits (805), Expect = 2.94e-107
Identity = 156/180 (86.67%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 1   MGMLVLIVVFIFDLVAFALAVAAEQRRTTASVVQTGNSRFCAYDSDIATGLGVGSLLILF 60
           MGMLV++VVF+ DLVAFALAVAAEQRRTTA+VVQ+GNS+FCAYDSDIATGLGVGSLL+LF
Sbjct: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60

Query: 61  ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITSWICFAIAEICLLAASVRNAYHTKYV 120
           ASQVI+MVASRCLCCG+ LRP GSRAWAITLFIT W+CF IAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFLIAEICLLAASVRNAYHTKYV 120

Query: 121 SSIIDEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHVETSTFAKDTGIRMANL 180
           SSI++E+ISCKMLRRGVFGAGAAFIVFTCVASELFY+SFSKAH +TS+FAKDTGIRMA++
Sbjct: 121 SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 180

[Close]

BLAST of Chy12G215530 vs. TAIR 10
Match: AT1G61065.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 206.1 bits (523), Expect = 2.4e-53
Identity = 108/179 (60.34%), Postives = 140/179 (78.21%), Query Frame = 0


Query: 3   MLVLIVVFIFDLVAFALAVAAEQRRTTASVV-QTGNSRFCAYDSDIATGLGVGSLLILFA 62
           +L+L++VF+FDL+AF LAVAAEQRRTT  +  ++ +  +C YD DIATGLGVGS L+L A
Sbjct: 4   VLLLLLVFVFDLIAFGLAVAAEQRRTTWQISRESRDLSYCVYDKDIATGLGVGSFLVLLA 63

Query: 63  SQVILMVASRCLCCGRGLRPGGSRAWAITLFITSWICFAIAEICLLAASVRNAYHTKYVS 122
           SQ+++MVASRCLCCGR L P GSR+WAI LFIT+W+ F IA++CLLA SVRNAYHTKY  
Sbjct: 64  SQLLIMVASRCLCCGRALTPSGSRSWAIFLFITTWVFFFIAQVCLLAGSVRNAYHTKYRV 123

Query: 123 SIIDEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHVETSTFAKDTGIRMANL 181
              +   SC+ LR+GVFGAGAAFIV T + SEL+YV+ S+A  +    ++D GIRM++L
Sbjct: 124 YFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVTLSRA--KDFQPSRDPGIRMSSL 180

[Close]

BLAST of Chy12G215530 vs. TAIR 10
Match: AT1G52910.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 177.2 bits (448), Expect = 1.2e-44
Identity = 90/162 (55.56%), Postives = 118/162 (72.84%), Query Frame = 0


Query: 4   LVLIVVFIFDLVAFALAVAAEQRRTTASVVQTGNSRF--CAYDSDIATGLGVGSLLILFA 63
           LV+I+VFI DL+A  LA+AAEQRR+   VV  G   F  C Y SDIAT  G G+ ++LF 
Sbjct: 5   LVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFVLLFI 64

Query: 64  SQVILMVASRCLCCGRGLRPGGSRAWAITLFITSWICFAIAEICLLAASVRNAYHTKYVS 123
           SQVI+MVASRC CCG+ L+PGGSRA  I LF+  W+ F IAE+CLLA S+RNAYHT Y  
Sbjct: 65  SQVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHTTYRR 124

Query: 124 S-IIDEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKA 163
              I+   SC+++R+GVF AGA+F +FT + S+ +Y+S+S+A
Sbjct: 125 MWNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRA 166

[Close]

BLAST of Chy12G215530 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 175.6 bits (444), Expect = 3.5e-44
Identity = 92/169 (54.44%), Postives = 119/169 (70.41%), Query Frame = 0


Query: 4   LVLIVVFIFDLVAFALAVAAEQRRTTASVVQTGNSR--FCAYDSDIATGLGVGSLLILFA 63
           +V  +VF+F+L+AF LAVAAEQRR+TA VVQ    +  +C YDSD ATG GVG+ L   A
Sbjct: 5   IVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFSVA 64

Query: 64  SQVILMVASRCLCCGRGLRPGGSRAWAITLFITSWICFAIAEICLLAASVRNAYHTKYVS 123
           SQ+++M+ SRC CCG+ L+PGGSRA A+ LFI SW+ F IAEICLLA SV NAYHTKY +
Sbjct: 65  SQILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHTKYRT 124

Query: 124 SIIDEQISCKMLRRGVFGAGAAFIVFTCVASELFY-VSFSKAHVETSTF 170
             +D    C+ LR+GVF AGA+F+ F  + S+ +Y   FS A    S +
Sbjct: 125 MFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSAAEASLSPY 173

[Close]

BLAST of Chy12G215530 vs. TAIR 10
Match: AT3G15480.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 171.0 bits (432), Expect = 8.7e-43
Identity = 86/162 (53.09%), Postives = 119/162 (73.46%), Query Frame = 0


Query: 4   LVLIVVFIFDLVAFALAVAAEQRRTTASVVQTGNSR--FCAYDSDIATGLGVGSLLILFA 63
           LV+I+VFI DL+A  LA+AAEQRR+   V    + +  +C Y +DIAT  G G+ ++LF 
Sbjct: 5   LVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFVLLFV 64

Query: 64  SQVILMVASRCLCCGRGLRPGGSRAWAITLFITSWICFAIAEICLLAASVRNAYHTKYVS 123
           SQV++M ASRC CCG+ L PGGSRA AI LF+  W+ F IAE+CLLAAS+RNAYHT+Y  
Sbjct: 65  SQVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHTQYRK 124

Query: 124 S-IIDEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKA 163
              +++  SC+++R+GVF AGAAF +FT + S+ +YV +S+A
Sbjct: 125 MWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRA 166

[Close]

BLAST of Chy12G215530 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 151.0 bits (380), Expect = 9.3e-37
Identity = 78/161 (48.45%), Postives = 110/161 (68.32%), Query Frame = 0


Query: 4   LVLIVVFIFDLVAFALAVAAEQRRTTASVVQ--TGNSRFCAYDSDIATGLGVGSLLILFA 63
           LV I+V    LVAF  ++AAE+RR+    +Q    N+ FC YDSD+ATG GVG+ L L +
Sbjct: 9   LVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLFLLS 68

Query: 64  SQVILMVASRCLCCGRGLRPGGSRAWAITLFITSWICFAIAEICLLAASVRNAYHTKYVS 123
           S+ +LM  ++C+C GR L PG  RAW+I  FI+SW+ F +AE C++A + +NAYHTKY+S
Sbjct: 69  SESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAYHTKYLS 128

Query: 124 SIIDEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKA 163
           S   +  SC  LR+G+F AGA FIV T V +  +Y+ F+K+
Sbjct: 129 S---QTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKS 166

The following BLAST results are available for this feature:

BLAST of Chy12G215530 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G215530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV31	4.3e-90	98.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073650 PE=4 SV=1	[more]
A0A1S3B5C0	2.2e-86	93.89	uncharacterized protein LOC103486188 OS=Cucumis melo OX=3656 GN=LOC103486188 PE=...	[more]
A0A5A7UTY8	2.2e-86	93.89	DnaJ subfamily C member 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1CEZ1	1.3e-81	87.22	uncharacterized protein LOC111010632 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1GRF5	2.8e-81	86.67	uncharacterized protein LOC111456828 OS=Cucurbita moschata OX=3662 GN=LOC1114568...	[more]

BLAST of Chy12G215530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146593.1	7.62e-119	98.33	uncharacterized protein LOC101207266 [Cucumis sativus] >XP_011653089.1 uncharact...	[more]
XP_008442281.1	5.77e-114	93.89	PREDICTED: uncharacterized protein LOC103486188 [Cucumis melo] >XP_016901058.1 P...	[more]
XP_038905949.1	2.84e-112	91.67	uncharacterized protein LOC120091872 [Benincasa hispida] >XP_038905950.1 unchara...	[more]
XP_022139805.1	1.03e-107	87.22	uncharacterized protein LOC111010632 [Momordica charantia] >XP_022139806.1 uncha...	[more]
XP_022954617.1	2.94e-107	86.67	uncharacterized protein LOC111456828 [Cucurbita moschata] >XP_022954618.1 unchar...	[more]

BLAST of Chy12G215530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61065.1	2.4e-53	60.34	Protein of unknown function (DUF1218)	[more]
AT1G52910.1	1.2e-44	55.56	Protein of unknown function (DUF1218)	[more]
AT4G27435.1	3.5e-44	54.44	Protein of unknown function (DUF1218)	[more]
AT3G15480.1	8.7e-43	53.09	Protein of unknown function (DUF1218)	[more]
AT1G13380.1	9.3e-37	48.45	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 56..149 e-value: 3.1E-25 score: 88.5
None	No IPR available	PANTHER	PTHR31769:SF16	1,3-BETA-GLUCAN SYNTHASE COMPONENT (DUF1218)	coord: 3..180
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 3..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G215530.1	Chy12G215530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane