Chy12G215380 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G215380
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chrH12: 14740470 .. 14741809 (-)
RNA-Seq Expression	Chy12G215380
Synteny	Chy12G215380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACTAGCTTGCTTTTCCTCTCAAGTCTTAACTGGCAAGAATAACGAATACATTGGAGAGGATTTACTTTCCCATGTTGTTCTTTCTGACATATCAAAGAAGCCACATTGTGGAGAGTTCTTGGCTTATTGGTTTCATATTAAATTGAATTATTCATTGTGTTTTACCCAGTATTATTGTTTTGACCCATCTCTTCCAACCCCCTTTCATCTTCAGATATCAAAGTGGATGAGTGATAAAAGATACTTTCCTTTATCGACTGCTGATATCGCAATACGGATGAATTTGATCTTAAGAGTTCATGGGTTGGAACAAGTGGAAGATTATTTCAATAACATGCCTAGTCAGTTGAAAAGGTACCAAGTTCATATAGCTCTTCTTAACTGCTATGCGCATGAAAAGTGTGTGGATAAAGCCAATGCCTTCATGCAGAAAATCAAGGAAATGGGTTTTGCTAAACTTCTCTTCCATACAATATCATGATGAATCTTTATCATCAAATTGGAGAATTTGAGAGATTAGATTCTCTGTTGAAAGAAATGAAAGAAACGGGTGTTGATTACAATCAATTCACATATACCACCCGACTAAGTGCATATGCTACTGCATCTGATTTTACGGGAATCGAAAAGATCATGGAACAAATGGAATCAAATACGAGTATTGTTCTAGATTGGAACTGTTATGTCATTGCTGCAATTGCTTACAATAAAGTTGGCTTAATAGACAAATCCATTTCCATGCTGAAGAAATCAAAAGGTCTCCTACCAACTGCCAAAAAGAAAGGTTTTGCATTTAATGTCTACCTCAAACTATATGCCAGAAATGGAAAGAAAGACGAGATACACCGCATATGGAATCTCTACAAGAAAGAGAAAATCTTCAACAAAGGTTTCATAAGCATGATAACATCACTTTTGATATTAGACGATATCAAAGGTGCGGAGCGTATTTACAAGGCATGGGAGACCCGGAAACTGGCATACGACTTGCGGATTCCAAACTTGTTGGTTGATGCGTATTGTAGAGCTGGTCTAATGGAGAAAGCTGAAGACCTTGTAAATGGGATGGTGACTGTAAGAGGCAAGTTTTCGGTCAAGTCGTGGTGCTATTTAGCGAGTAGATATCTTCAGAAGGATCAACTACCTCAGGCAGTTGAGACACTGAAGAAAGCACCCAGCTTGTGTCCATCAGAACTGAAGTCCGTCAAGGAAATTTTGGCAGCATTTTTGGATGGGAAGCAAGATGTGGAAGAAACTGAGAAAGTTGTTAATTTGTTGAGGGAAAAAGATAACTCTCATCCTGCTGGTGCTCATGATATATTGGTAGAGCGATGA

mRNA sequence

ATGGAACTAGCTTGCTTTTCCTCTCAAGTCTTAACTGGCAAGAATAACGAATACATTGGAGAGGATTTACTTTCCCATGTTGTTCTTTCTGACATATCAAAGAAGCCACATTGTGGAGAGTTCTTGGCTTATTGGTTTCATATTAAATTGAATTATTCATTGTGTTTTACCCAGTATTATTGTTTTGACCCATCTCTTCCAACCCCCTTTCATCTTCAGATATCAAAGTGGATGAGTGATAAAAGATACTTTCCTTTATCGACTGCTGATATCGCAATACGGATGAATTTGATCTTAAGAGTTCATGGGTTGGAACAAGTGGAAGATTATTTCAATAACATGCCTAGTCAGTTGAAAAGGTACCAAGTTCATATAGCTCTTCTTAACTGCTATGCGCATGAAAAGTGTGTGGATAAAGCCAATGCCTTCATGCAGAAAATCAAGGAAATGGAATTTGAGAGATTAGATTCTCTGTTGAAAGAAATGAAAGAAACGGGTGTTGATTACAATCAATTCACATATACCACCCGACTAAGTGCATATGCTACTGCATCTGATTTTACGGGAATCGAAAAGATCATGGAACAAATGGAATCAAATACGAGTATTGTTCTAGATTGGAACTGTTATGTCATTGCTGCAATTGCTTACAATAAAGTTGGCTTAATAGACAAATCCATTTCCATGCTGAAGAAATCAAAAGGTCTCCTACCAACTGCCAAAAAGAAAGGTTTTGCATTTAATGTCTACCTCAAACTATATGCCAGAAATGGAAAGAAAGACGAGATACACCGCATATGGAATCTCTACAAGAAAGAGAAAATCTTCAACAAAGGTTTCATAAGCATGATAACATCACTTTTGATATTAGACGATATCAAAGGTGCGGAGCGTATTTACAAGGCATGGGAGACCCGGAAACTGGCATACGACTTGCGGATTCCAAACTTGTTGGTTGATGCGTATTGTAGAGCTGGTCTAATGGAGAAAGCTGAAGACCTTGTAAATGGGATGGTGACTGTAAGAGGCAAGTTTTCGGTCAAGTCGTGGTGCTATTTAGCGAGTAGATATCTTCAGAAGGATCAACTACCTCAGGCAGTTGAGACACTGAAGAAAGCACCCAGCTTGTGTCCATCAGAACTGAAGTCCGTCAAGGAAATTTTGGCAGCATTTTTGGATGGGAAGCAAGATGTGGAAGAAACTGAGAAAGTTGTTAATTTGTTGAGGGAAAAAGATAACTCTCATCCTGCTGGTGCTCATGATATATTGGTAGAGCGATGA

Coding sequence (CDS)

ATGGAACTAGCTTGCTTTTCCTCTCAAGTCTTAACTGGCAAGAATAACGAATACATTGGAGAGGATTTACTTTCCCATGTTGTTCTTTCTGACATATCAAAGAAGCCACATTGTGGAGAGTTCTTGGCTTATTGGTTTCATATTAAATTGAATTATTCATTGTGTTTTACCCAGTATTATTGTTTTGACCCATCTCTTCCAACCCCCTTTCATCTTCAGATATCAAAGTGGATGAGTGATAAAAGATACTTTCCTTTATCGACTGCTGATATCGCAATACGGATGAATTTGATCTTAAGAGTTCATGGGTTGGAACAAGTGGAAGATTATTTCAATAACATGCCTAGTCAGTTGAAAAGGTACCAAGTTCATATAGCTCTTCTTAACTGCTATGCGCATGAAAAGTGTGTGGATAAAGCCAATGCCTTCATGCAGAAAATCAAGGAAATGGAATTTGAGAGATTAGATTCTCTGTTGAAAGAAATGAAAGAAACGGGTGTTGATTACAATCAATTCACATATACCACCCGACTAAGTGCATATGCTACTGCATCTGATTTTACGGGAATCGAAAAGATCATGGAACAAATGGAATCAAATACGAGTATTGTTCTAGATTGGAACTGTTATGTCATTGCTGCAATTGCTTACAATAAAGTTGGCTTAATAGACAAATCCATTTCCATGCTGAAGAAATCAAAAGGTCTCCTACCAACTGCCAAAAAGAAAGGTTTTGCATTTAATGTCTACCTCAAACTATATGCCAGAAATGGAAAGAAAGACGAGATACACCGCATATGGAATCTCTACAAGAAAGAGAAAATCTTCAACAAAGGTTTCATAAGCATGATAACATCACTTTTGATATTAGACGATATCAAAGGTGCGGAGCGTATTTACAAGGCATGGGAGACCCGGAAACTGGCATACGACTTGCGGATTCCAAACTTGTTGGTTGATGCGTATTGTAGAGCTGGTCTAATGGAGAAAGCTGAAGACCTTGTAAATGGGATGGTGACTGTAAGAGGCAAGTTTTCGGTCAAGTCGTGGTGCTATTTAGCGAGTAGATATCTTCAGAAGGATCAACTACCTCAGGCAGTTGAGACACTGAAGAAAGCACCCAGCTTGTGTCCATCAGAACTGAAGTCCGTCAAGGAAATTTTGGCAGCATTTTTGGATGGGAAGCAAGATGTGGAAGAAACTGAGAAAGTTGTTAATTTGTTGAGGGAAAAAGATAACTCTCATCCTGCTGGTGCTCATGATATATTGGTAGAGCGATGA

Protein sequence

MELACFSSQVLTGKNNEYIGEDLLSHVVLSDISKKPHCGEFLAYWFHIKLNYSLCFTQYYCFDPSLPTPFHLQISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMEFERLDSLLKEMKETGVDYNQFTYTTRLSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISMLKKSKGLLPTAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISMITSLLILDDIKGAERIYKAWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVNGMVTVRGKFSVKSWCYLASRYLQKDQLPQAVETLKKAPSLCPSELKSVKEILAAFLDGKQDVEETEKVVNLLREKDNSHPAGAHDILVER*

Homology

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BLAST of Chy12G215380 vs. ExPASy Swiss-Prot
Match: Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.1e-61
Identity = 131/364 (35.99%), Postives = 217/364 (59.62%), Query Frame = 0


Query: 72  LQISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNCY 131
           LQIS WMS+ R   +S  D+AIR++LI +V GL + E +F  +P + + Y ++ ALLNCY
Sbjct: 90  LQISDWMSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCY 149

Query: 132 AHEKCVDKANAFMQKIKEMEFER--------------------LDSLLKEMKETGVDYNQ 191
           A +K + KA    Q++KE+ F +                    ++ LL+EM++  V  + 
Sbjct: 150 ASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDI 209

Query: 192 FTYTTRLSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISMLK 251
           FT  TRL AY+  SD  G+EK + + E++  + LDW  Y   A  Y K GL +K++ ML+
Sbjct: 210 FTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLR 269

Query: 252 KSKGLLPTAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKK-EKIFNKGFISMITSLLIL 311
           KS+ ++  A+K+  A+ V +  Y   GKK+E++R+W+LYK+ +  +N G+IS+I++LL +
Sbjct: 270 KSEQMV-NAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKM 329

Query: 312 DDIKGAERIYKAWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVNGMVTVRGKFSVKSW 371
           DDI+  E+I + WE     +D+RIP+LL+  YC+ G+MEKAE++VN +V         +W
Sbjct: 330 DDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTW 389

Query: 372 CYLASRYLQKDQLPQAVETLKKAPSLCPSELKSVKEILAA---FLDGKQDVEETEKVVNL 412
             LA  Y    ++ +AVE  K+A  +     +  + +L +   +L+G++D+E   K++ L
Sbjct: 390 ERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRL 449

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BLAST of Chy12G215380 vs. ExPASy Swiss-Prot
Match: Q84JR3 (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 9.9e-42
Identity = 103/325 (31.69%), Postives = 173/325 (53.23%), Query Frame = 0


Query: 72  LQISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNCY 131
           L++SKWM++      S  + A+ ++LI RV+G    E+YF N+  Q K  + + ALLNCY
Sbjct: 77  LEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCY 136

Query: 132 AHEKCVDKANAFMQKIKEMEF--------------------ERLDSLLKEMKETGVDYNQ 191
             ++ V+K+    +K+KEM F                    E++  +L+EMKE  V  + 
Sbjct: 137 VRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDN 196

Query: 192 FTYTTRLSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISMLK 251
           ++Y   ++A+    D   I   +  ME    I +DWN Y +AA  Y   G  D+++ +LK
Sbjct: 197 YSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLK 256

Query: 252 KSKGLLPTAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKK--EKIFNKGFISMITSLLI 311
            S+  L   KK G  +N  + LYAR GKK E+ R+W+L K   ++  N+ +++++ SL+ 
Sbjct: 257 MSENRL--EKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVK 316

Query: 312 LDDIKGAERIYKAWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVNGMVTVRGKFSV-K 371
           +D +  AE +   W++    YD R+PN ++  Y    + EKAE ++  +   RGK +  +
Sbjct: 317 IDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLAR-RGKATTPE 376

Query: 372 SWCYLASRYLQKDQLPQAVETLKKA 374
           SW  +A+ Y +K  L  A + +K A
Sbjct: 377 SWELVATAYAEKGTLENAFKCMKTA 398

[Close]

BLAST of Chy12G215380 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 1.4e-40
Identity = 107/366 (29.23%), Postives = 196/366 (53.55%), Query Frame = 0


Query: 72  LQISKWMSDK-RYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNC 131
           L++  WM+++   F LS +D AI+++LI +V G+   E++F  +P   K  +V+ +LLN 
Sbjct: 119 LEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNA 178

Query: 132 YAHEKCVDKANAFMQKIKE--------------------MEFERLDSLLKEMKETGVDYN 191
           Y   K  +KA A +  +++                     E++++D+++ EMK+  +  +
Sbjct: 179 YVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLD 238

Query: 192 QFTYTTRLSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISML 251
            ++Y   LS+  +      +E + +QM+S+ SI  +W  +   A  Y K+G  +K+   L
Sbjct: 239 IYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDAL 298

Query: 252 KKSKGLLPTAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKK--EKIFNKGFISMITSLL 311
           +K +  +    +    ++  L LY   G K E++R+W++YK     I N G+ ++++SL+
Sbjct: 299 RKVEARI--TGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLV 358

Query: 312 ILDDIKGAERIYKAWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVNGMVTVRGKFSVK 371
            + DI+GAE++Y+ W   K +YD RIPNLL++AY +   +E AE L + MV + GK S  
Sbjct: 359 RMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSS 418

Query: 372 SWCYLASRYLQKDQLPQAVETLKKAPSLCPSELKSVKEILAA----FLDGKQDVEETEKV 411
           +W  LA  + +K  + +A+  L+ A S   S     K ++ +      + + DV   E V
Sbjct: 419 TWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAV 478

[Close]

BLAST of Chy12G215380 vs. ExPASy Swiss-Prot
Match: Q9C7F1 (Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis thaliana OX=3702 GN=At1g28020 PE=3 SV=2)

HSP 1 Score: 162.2 bits (409), Expect = 1.3e-38
Identity = 99/288 (34.38%), Postives = 156/288 (54.17%), Query Frame = 0


Query: 72  LQISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNCY 131
           LQ+S+WMS ++   L   D A R++LI  V GLE+ E +F ++P   +   V+ +LLN Y
Sbjct: 88  LQVSEWMSKEKICNLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSY 147

Query: 132 AH-EKCVDKANAFMQKIKEMEF--------------------ERLDSLLKEMKETGVDYN 191
           A  +K + KA A  QK++++                      E+++ LL EMK+  V+ +
Sbjct: 148 ARSDKTLCKAEATFQKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEAD 207

Query: 192 QFTYTTRLSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISML 251
             T    L  Y+   D T +EK + + E    I L+W+  +  A AY +     K++ ML
Sbjct: 208 NVTVNNVLKLYSAVCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKML 267

Query: 252 KKSKGLLPTAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKE--KIFNKGFISMITSLL 311
           + ++ L+     K  A++  +KLY   G ++E+ R+W LYK +  +  N G+ ++I SLL
Sbjct: 268 RLTEQLVDQKSLKS-AYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLL 327

Query: 312 ILDDIKGAERIYKAWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVN 337
            +DDI GAE IYK WE+  L +D RIP +L   Y   G+ EKAE L+N
Sbjct: 328 KVDDIVGAEEIYKVWESLPLEFDHRIPTMLASGYRDRGMTEKAEKLMN 374

[Close]

BLAST of Chy12G215380 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 3.0e-38
Identity = 100/366 (27.32%), Postives = 188/366 (51.37%), Query Frame = 0


Query: 72  LQISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNCY 131
           L++S+ M ++R    + +D AI ++L+ +   +   E+YF ++P   K    + +LLNCY
Sbjct: 75  LKLSEVM-EERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCY 134

Query: 132 AHEKCVDKANAFMQKIKEM--------------------EFERLDSLLKEMKETGVDYNQ 191
             E   +KA   + K+KE+                    E E++ ++++E+K   V  + 
Sbjct: 135 CKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDS 194

Query: 192 FTYTTRLSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISMLK 251
           +TY   + A A  +D +G+E+++E+M  +  +  DW  Y   A  Y   GL  K+   L+
Sbjct: 195 YTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQ 254

Query: 252 KSKGLLPTAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKK--EKIFNKGFISMITSLLI 311
           + +  +   ++   A+   + LY R GK  E++RIW   +    K  N  +++MI  L+ 
Sbjct: 255 ELE--MKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVK 314

Query: 312 LDDIKGAERIYKAWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVNGMVTVRGKFSVKS 371
           L+D+ GAE ++K W+     YD+RI N+L+ AY + GL++KA +L        GK + K+
Sbjct: 315 LNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKT 374

Query: 372 WCYLASRYLQKDQLPQAVETLKKAPSLCPSE----LKSVKEI--LAAFLDGKQDVEETEK 410
           W      Y++   + +A+E + KA S+   +    L S + +  L ++ + K+DV   E 
Sbjct: 375 WEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAEN 434

[Close]

BLAST of Chy12G215380 vs. ExPASy TrEMBL
Match: A0A0A0LV44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073790 PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 4.7e-172
Identity = 315/373 (84.45%), Postives = 329/373 (88.20%), Query Frame = 0


Query: 72  LQISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNCY 131
           L+ISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF+NMPSQLKRYQVHIALLNCY
Sbjct: 81  LEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCY 140

Query: 132 AHEKCVDKANAFMQKIKEM--------------------EFERLDSLLKEMKETGVDYNQ 191
           AHEKCVDKANAFMQKIKEM                    EFERLDSLLKEMKE GV Y++
Sbjct: 141 AHEKCVDKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDR 200

Query: 192 FTYTTRLSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISMLK 251
           FTY+ R+SAYA ASDF GIEKIMEQMESN SIVLDWNCYVIAA AYNKVGLIDKSISMLK
Sbjct: 201 FTYSIRISAYAAASDFRGIEKIMEQMESNPSIVLDWNCYVIAANAYNKVGLIDKSISMLK 260

Query: 252 KSKGLLPTAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISMITSLLILD 311
           KS+GLL   KKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISMITSL +LD
Sbjct: 261 KSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISMITSLFVLD 320

Query: 312 DIKGAERIYKAWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVNGMVTVRGKFSVKSWC 371
           DIKGAERIYK WETRKL+YDLRIPNLLVDAYCRAGLMEKAE L+N MV VR KFSV+SWC
Sbjct: 321 DIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFSVESWC 380

Query: 372 YLASRYLQKDQLPQAVETLKKAPSLCPSELKSVKEILAAFLDGKQDVEETEKVVNLLREK 425
           YLAS YLQKDQLPQAVETLK A S+CPS L  VKEILAAFLDGKQDVEETEKVVNLLREK
Sbjct: 381 YLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAFLDGKQDVEETEKVVNLLREK 440

[Close]

BLAST of Chy12G215380 vs. ExPASy TrEMBL
Match: A0A5D3DSH1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00760 PE=4 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 4.9e-169
Identity = 309/375 (82.40%), Postives = 328/375 (87.47%), Query Frame = 0


Query: 72  LQISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNCY 131
           L+ISKWMSDKRY PLST D+A RMNLILRVHGLEQVEDYFNNMPSQLKRY VHIALLNCY
Sbjct: 81  LEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYFNNMPSQLKRYHVHIALLNCY 140

Query: 132 AHEKCVDKANAFMQKIKEM--------------------EFERLDSLLKEMKETGVDYNQ 191
           AHEKCVDKANAF+QKIKEM                    EFERLDSLLKEMKE GV Y++
Sbjct: 141 AHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGEFERLDSLLKEMKEKGVYYDR 200

Query: 192 FTYTTRLSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISMLK 251
           FTY+ RLSAYA ASD TGIEK+MEQMESNTSIVLDWNCYVIAA AYNKVGLIDKS+SMLK
Sbjct: 201 FTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYVIAANAYNKVGLIDKSVSMLK 260

Query: 252 KSKGLLPTAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISMITSLLILD 311
           KS+G L T KKKG AFNVYLKLYARNGKKDE+HRIWNLYKKEKIFNKGFISMI SLLILD
Sbjct: 261 KSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYKKEKIFNKGFISMIRSLLILD 320

Query: 312 DIKGAERIYKAWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVNGMVTVRGKFSVKSWC 371
           DI+GAE IYK WET+KL+YD+RIPNLLVDAYCRAGL+EKAE+LVN +V VRGKFSV+SWC
Sbjct: 321 DIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKAEELVNEIVNVRGKFSVESWC 380

Query: 372 YLASRYLQKDQLPQAVETLKKAPSLCPSELKSVKEILAAFLDGKQDVEETEKVVNLLREK 427
           YLAS YLQKDQLPQAVETLKKA SLCPSEL  VKEILAAF DGKQDVEE EKVVNLLREK
Sbjct: 381 YLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAFSDGKQDVEEAEKVVNLLREK 440

[Close]

BLAST of Chy12G215380 vs. ExPASy TrEMBL
Match: A0A5A7UP59 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G001650 PE=4 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 4.9e-169
Identity = 309/375 (82.40%), Postives = 328/375 (87.47%), Query Frame = 0


Query: 72  LQISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNCY 131
           L+ISKWMSDKRY PLST D+A RMNLILRVHGLEQVEDYFNNMPSQLKRY VHIALLNCY
Sbjct: 587 LEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYFNNMPSQLKRYHVHIALLNCY 646

Query: 132 AHEKCVDKANAFMQKIKEM--------------------EFERLDSLLKEMKETGVDYNQ 191
           AHEKCVDKANAF+QKIKEM                    EFERLDSLLKEMKE GV Y++
Sbjct: 647 AHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGEFERLDSLLKEMKEKGVYYDR 706

Query: 192 FTYTTRLSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISMLK 251
           FTY+ RLSAYA ASD TGIEK+MEQMESNTSIVLDWNCYVIAA AYNKVGLIDKS+SMLK
Sbjct: 707 FTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYVIAANAYNKVGLIDKSVSMLK 766

Query: 252 KSKGLLPTAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISMITSLLILD 311
           KS+G L T KKKG AFNVYLKLYARNGKKDE+HRIWNLYKKEKIFNKGFISMI SLLILD
Sbjct: 767 KSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYKKEKIFNKGFISMIRSLLILD 826

Query: 312 DIKGAERIYKAWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVNGMVTVRGKFSVKSWC 371
           DI+GAE IYK WET+KL+YD+RIPNLLVDAYCRAGL+EKAE+LVN +V VRGKFSV+SWC
Sbjct: 827 DIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKAEELVNEIVNVRGKFSVESWC 886

Query: 372 YLASRYLQKDQLPQAVETLKKAPSLCPSELKSVKEILAAFLDGKQDVEETEKVVNLLREK 427
           YLAS YLQKDQLPQAVETLKKA SLCPSEL  VKEILAAF DGKQDVEE EKVVNLLREK
Sbjct: 887 YLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAFSDGKQDVEEAEKVVNLLREK 946

[Close]

BLAST of Chy12G215380 vs. ExPASy TrEMBL
Match: A0A1S3B572 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103486303 PE=4 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 4.9e-169
Identity = 309/375 (82.40%), Postives = 328/375 (87.47%), Query Frame = 0


Query: 72  LQISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNCY 131
           L+ISKWMSDKRY PLST D+A RMNLILRVHGLEQVEDYFNNMPSQLKRY VHIALLNCY
Sbjct: 81  LEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYFNNMPSQLKRYHVHIALLNCY 140

Query: 132 AHEKCVDKANAFMQKIKEM--------------------EFERLDSLLKEMKETGVDYNQ 191
           AHEKCVDKANAF+QKIKEM                    EFERLDSLLKEMKE GV Y++
Sbjct: 141 AHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGEFERLDSLLKEMKEKGVYYDR 200

Query: 192 FTYTTRLSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISMLK 251
           FTY+ RLSAYA ASD TGIEK+MEQMESNTSIVLDWNCYVIAA AYNKVGLIDKS+SMLK
Sbjct: 201 FTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYVIAANAYNKVGLIDKSVSMLK 260

Query: 252 KSKGLLPTAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISMITSLLILD 311
           KS+G L T KKKG AFNVYLKLYARNGKKDE+HRIWNLYKKEKIFNKGFISMI SLLILD
Sbjct: 261 KSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYKKEKIFNKGFISMIRSLLILD 320

Query: 312 DIKGAERIYKAWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVNGMVTVRGKFSVKSWC 371
           DI+GAE IYK WET+KL+YD+RIPNLLVDAYCRAGL+EKAE+LVN +V VRGKFSV+SWC
Sbjct: 321 DIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKAEELVNEIVNVRGKFSVESWC 380

Query: 372 YLASRYLQKDQLPQAVETLKKAPSLCPSELKSVKEILAAFLDGKQDVEETEKVVNLLREK 427
           YLAS YLQKDQLPQAVETLKKA SLCPSEL  VKEILAAF DGKQDVEE EKVVNLLREK
Sbjct: 381 YLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAFSDGKQDVEEAEKVVNLLREK 440

[Close]

BLAST of Chy12G215380 vs. ExPASy TrEMBL
Match: A0A5D3DRU6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00750 PE=4 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 1.3e-153
Identity = 290/379 (76.52%), Postives = 316/379 (83.38%), Query Frame = 0


Query: 72  LQISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNCY 131
           L++SKWMSDK   PLSTADIA RMNLILRVHGLEQVEDYFNNMPS+LKRYQVHIALLNCY
Sbjct: 81  LEMSKWMSDKVCLPLSTADIATRMNLILRVHGLEQVEDYFNNMPSKLKRYQVHIALLNCY 140

Query: 132 AHEKCVDKANAFMQKIKEM--------------------EFERLDSLLKEMKETGVDYNQ 191
           AHEKCVDKANA +QKIKE+                    EFERLDSL+KEMKE G+ Y++
Sbjct: 141 AHEKCVDKANALLQKIKELGFATTPHPYNIMMNLYHQIGEFERLDSLMKEMKERGLYYDR 200

Query: 192 FTYTTRLSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISMLK 251
           FTY+ RLSAYATASD  GIEKI EQMESNTSIVLDWNCYV+AA AY KVGLIDKSISMLK
Sbjct: 201 FTYSIRLSAYATASDCAGIEKITEQMESNTSIVLDWNCYVVAADAYYKVGLIDKSISMLK 260

Query: 252 KSKGLL-PTAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISMITSLLIL 311
           KS+ LL  TA+ K  AFN+YL LYA+NGKKDE +RIWNLYKKEK+FNKGFISMITSLLIL
Sbjct: 261 KSEELLAKTAENKCHAFNIYLTLYAKNGKKDETYRIWNLYKKEKVFNKGFISMITSLLIL 320

Query: 312 DDIKGAERI-----YKAWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVNGMVTVRGKF 371
           DDIKGA RI      + WET+KL+YDLRIPNLLVDAYCRAGLME+AE LV  M+TVR KF
Sbjct: 321 DDIKGARRICEEWETQVWETQKLSYDLRIPNLLVDAYCRAGLMEEAEVLVYEMMTVRRKF 380

Query: 372 SVKSWCYLASRYLQKDQLPQAVETLKKAPSLCPSELKSVKEILAAFLDGKQDVEETEKVV 425
           SVKSWCY+AS YLQKDQLP+AVETLK A SLCPS+L  VKEILAAFLDGKQDVEE EKVV
Sbjct: 381 SVKSWCYIASGYLQKDQLPEAVETLKIAASLCPSKLDYVKEILAAFLDGKQDVEEVEKVV 440

[Close]

BLAST of Chy12G215380 vs. NCBI nr
Match: XP_011653157.2 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial isoform X1 [Cucumis sativus] >KAE8652711.1 hypothetical protein Csa_013210 [Cucumis sativus])

HSP 1 Score: 616 bits (1589), Expect = 4.99e-218
Identity = 317/373 (84.99%), Postives = 330/373 (88.47%), Query Frame = 0


Query: 72  LQISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNCY 131
           L+ISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF+NMPSQLKRYQVHIALLNCY
Sbjct: 81  LEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCY 140

Query: 132 AHEKCVDKANAFMQKIKEM--------------------EFERLDSLLKEMKETGVDYNQ 191
           AHEKCVDKANAFMQKIKEM                    EFERLDSLLKEMKE GV Y++
Sbjct: 141 AHEKCVDKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDR 200

Query: 192 FTYTTRLSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISMLK 251
           FTY+ R+SAYA ASDF GIEKIMEQMESN SIVLDWNCYVIAA AYNKVGLIDKSISMLK
Sbjct: 201 FTYSIRISAYAAASDFRGIEKIMEQMESNPSIVLDWNCYVIAANAYNKVGLIDKSISMLK 260

Query: 252 KSKGLLPTAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISMITSLLILD 311
           KS+GLL   KKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISMITSLLILD
Sbjct: 261 KSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISMITSLLILD 320

Query: 312 DIKGAERIYKAWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVNGMVTVRGKFSVKSWC 371
           DIKGAERIYK WETRKL+YDLRIPNLLVDAYCRAGLMEKAE L+N MV VR KFSV+SWC
Sbjct: 321 DIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFSVESWC 380

Query: 372 YLASRYLQKDQLPQAVETLKKAPSLCPSELKSVKEILAAFLDGKQDVEETEKVVNLLREK 424
           YLAS YLQKDQLPQAVETLK A S+CPS L  VKEILAAFLDGKQDVEETEKVVNLLREK
Sbjct: 381 YLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAFLDGKQDVEETEKVVNLLREK 440

[Close]

BLAST of Chy12G215380 vs. NCBI nr
Match: XP_031744923.1 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial isoform X2 [Cucumis sativus] >XP_031744924.1 pentatricopeptide repeat-containing protein At2g20710, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 605 bits (1559), Expect = 7.94e-215
Identity = 312/367 (85.01%), Postives = 324/367 (88.28%), Query Frame = 0


Query: 78  MSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNCYAHEKCV 137
           MSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF+NMPSQLKRYQVHIALLNCYAHEKCV
Sbjct: 1   MSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCV 60

Query: 138 DKANAFMQKIKEM--------------------EFERLDSLLKEMKETGVDYNQFTYTTR 197
           DKANAFMQKIKEM                    EFERLDSLLKEMKE GV Y++FTY+ R
Sbjct: 61  DKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSIR 120

Query: 198 LSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISMLKKSKGLL 257
           +SAYA ASDF GIEKIMEQMESN SIVLDWNCYVIAA AYNKVGLIDKSISMLKKS+GLL
Sbjct: 121 ISAYAAASDFRGIEKIMEQMESNPSIVLDWNCYVIAANAYNKVGLIDKSISMLKKSEGLL 180

Query: 258 PTAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISMITSLLILDDIKGAE 317
              KKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISMITSLLILDDIKGAE
Sbjct: 181 ANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISMITSLLILDDIKGAE 240

Query: 318 RIYKAWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVNGMVTVRGKFSVKSWCYLASRY 377
           RIYK WETRKL+YDLRIPNLLVDAYCRAGLMEKAE L+N MV VR KFSV+SWCYLAS Y
Sbjct: 241 RIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFSVESWCYLASGY 300

Query: 378 LQKDQLPQAVETLKKAPSLCPSELKSVKEILAAFLDGKQDVEETEKVVNLLREKDNSHPA 424
           LQKDQLPQAVETLK A S+CPS L  VKEILAAFLDGKQDVEETEKVVNLLREKD+SHPA
Sbjct: 301 LQKDQLPQAVETLKLAASVCPSRLNYVKEILAAFLDGKQDVEETEKVVNLLREKDDSHPA 360

[Close]

BLAST of Chy12G215380 vs. NCBI nr
Match: XP_008442434.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis melo] >TYK26412.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 604 bits (1558), Expect = 2.08e-213
Identity = 309/375 (82.40%), Postives = 328/375 (87.47%), Query Frame = 0


Query: 72  LQISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNCY 131
           L+ISKWMSDKRY PLST D+A RMNLILRVHGLEQVEDYFNNMPSQLKRY VHIALLNCY
Sbjct: 81  LEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYFNNMPSQLKRYHVHIALLNCY 140

Query: 132 AHEKCVDKANAFMQKIKEM--------------------EFERLDSLLKEMKETGVDYNQ 191
           AHEKCVDKANAF+QKIKEM                    EFERLDSLLKEMKE GV Y++
Sbjct: 141 AHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGEFERLDSLLKEMKEKGVYYDR 200

Query: 192 FTYTTRLSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISMLK 251
           FTY+ RLSAYA ASD TGIEK+MEQMESNTSIVLDWNCYVIAA AYNKVGLIDKS+SMLK
Sbjct: 201 FTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYVIAANAYNKVGLIDKSVSMLK 260

Query: 252 KSKGLLPTAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISMITSLLILD 311
           KS+G L T KKKG AFNVYLKLYARNGKKDE+HRIWNLYKKEKIFNKGFISMI SLLILD
Sbjct: 261 KSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYKKEKIFNKGFISMIRSLLILD 320

Query: 312 DIKGAERIYKAWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVNGMVTVRGKFSVKSWC 371
           DI+GAE IYK WET+KL+YD+RIPNLLVDAYCRAGL+EKAE+LVN +V VRGKFSV+SWC
Sbjct: 321 DIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKAEELVNEIVNVRGKFSVESWC 380

Query: 372 YLASRYLQKDQLPQAVETLKKAPSLCPSELKSVKEILAAFLDGKQDVEETEKVVNLLREK 426
           YLAS YLQKDQLPQAVETLKKA SLCPSEL  VKEILAAF DGKQDVEE EKVVNLLREK
Sbjct: 381 YLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAFSDGKQDVEEAEKVVNLLREK 440

[Close]

BLAST of Chy12G215380 vs. NCBI nr
Match: KAA0056984.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 604 bits (1558), Expect = 3.64e-206
Identity = 309/375 (82.40%), Postives = 328/375 (87.47%), Query Frame = 0


Query: 72  LQISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNCY 131
           L+ISKWMSDKRY PLST D+A RMNLILRVHGLEQVEDYFNNMPSQLKRY VHIALLNCY
Sbjct: 587 LEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYFNNMPSQLKRYHVHIALLNCY 646

Query: 132 AHEKCVDKANAFMQKIKEM--------------------EFERLDSLLKEMKETGVDYNQ 191
           AHEKCVDKANAF+QKIKEM                    EFERLDSLLKEMKE GV Y++
Sbjct: 647 AHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGEFERLDSLLKEMKEKGVYYDR 706

Query: 192 FTYTTRLSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISMLK 251
           FTY+ RLSAYA ASD TGIEK+MEQMESNTSIVLDWNCYVIAA AYNKVGLIDKS+SMLK
Sbjct: 707 FTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYVIAANAYNKVGLIDKSVSMLK 766

Query: 252 KSKGLLPTAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISMITSLLILD 311
           KS+G L T KKKG AFNVYLKLYARNGKKDE+HRIWNLYKKEKIFNKGFISMI SLLILD
Sbjct: 767 KSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYKKEKIFNKGFISMIRSLLILD 826

Query: 312 DIKGAERIYKAWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVNGMVTVRGKFSVKSWC 371
           DI+GAE IYK WET+KL+YD+RIPNLLVDAYCRAGL+EKAE+LVN +V VRGKFSV+SWC
Sbjct: 827 DIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKAEELVNEIVNVRGKFSVESWC 886

Query: 372 YLASRYLQKDQLPQAVETLKKAPSLCPSELKSVKEILAAFLDGKQDVEETEKVVNLLREK 426
           YLAS YLQKDQLPQAVETLKKA SLCPSEL  VKEILAAF DGKQDVEE EKVVNLLREK
Sbjct: 887 YLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAFSDGKQDVEEAEKVVNLLREK 946

[Close]

BLAST of Chy12G215380 vs. NCBI nr
Match: XP_008442448.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis melo] >TYK26411.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 553 bits (1425), Expect = 4.70e-193
Identity = 290/379 (76.52%), Postives = 316/379 (83.38%), Query Frame = 0


Query: 72  LQISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNCY 131
           L++SKWMSDK   PLSTADIA RMNLILRVHGLEQVEDYFNNMPS+LKRYQVHIALLNCY
Sbjct: 81  LEMSKWMSDKVCLPLSTADIATRMNLILRVHGLEQVEDYFNNMPSKLKRYQVHIALLNCY 140

Query: 132 AHEKCVDKANAFMQKIKEM--------------------EFERLDSLLKEMKETGVDYNQ 191
           AHEKCVDKANA +QKIKE+                    EFERLDSL+KEMKE G+ Y++
Sbjct: 141 AHEKCVDKANALLQKIKELGFATTPHPYNIMMNLYHQIGEFERLDSLMKEMKERGLYYDR 200

Query: 192 FTYTTRLSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISMLK 251
           FTY+ RLSAYATASD  GIEKI EQMESNTSIVLDWNCYV+AA AY KVGLIDKSISMLK
Sbjct: 201 FTYSIRLSAYATASDCAGIEKITEQMESNTSIVLDWNCYVVAADAYYKVGLIDKSISMLK 260

Query: 252 KSKGLLP-TAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISMITSLLIL 311
           KS+ LL  TA+ K  AFN+YL LYA+NGKKDE +RIWNLYKKEK+FNKGFISMITSLLIL
Sbjct: 261 KSEELLAKTAENKCHAFNIYLTLYAKNGKKDETYRIWNLYKKEKVFNKGFISMITSLLIL 320

Query: 312 DDIKGAERIYK-----AWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVNGMVTVRGKF 371
           DDIKGA RI +      WET+KL+YDLRIPNLLVDAYCRAGLME+AE LV  M+TVR KF
Sbjct: 321 DDIKGARRICEEWETQVWETQKLSYDLRIPNLLVDAYCRAGLMEEAEVLVYEMMTVRRKF 380

Query: 372 SVKSWCYLASRYLQKDQLPQAVETLKKAPSLCPSELKSVKEILAAFLDGKQDVEETEKVV 424
           SVKSWCY+AS YLQKDQLP+AVETLK A SLCPS+L  VKEILAAFLDGKQDVEE EKVV
Sbjct: 381 SVKSWCYIASGYLQKDQLPEAVETLKIAASLCPSKLDYVKEILAAFLDGKQDVEEVEKVV 440

[Close]

BLAST of Chy12G215380 vs. TAIR 10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 238.8 bits (608), Expect = 8.0e-63
Identity = 131/364 (35.99%), Postives = 217/364 (59.62%), Query Frame = 0


Query: 72  LQISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNCY 131
           LQIS WMS+ R   +S  D+AIR++LI +V GL + E +F  +P + + Y ++ ALLNCY
Sbjct: 90  LQISDWMSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCY 149

Query: 132 AHEKCVDKANAFMQKIKEMEFER--------------------LDSLLKEMKETGVDYNQ 191
           A +K + KA    Q++KE+ F +                    ++ LL+EM++  V  + 
Sbjct: 150 ASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDI 209

Query: 192 FTYTTRLSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISMLK 251
           FT  TRL AY+  SD  G+EK + + E++  + LDW  Y   A  Y K GL +K++ ML+
Sbjct: 210 FTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLR 269

Query: 252 KSKGLLPTAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKK-EKIFNKGFISMITSLLIL 311
           KS+ ++  A+K+  A+ V +  Y   GKK+E++R+W+LYK+ +  +N G+IS+I++LL +
Sbjct: 270 KSEQMV-NAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKM 329

Query: 312 DDIKGAERIYKAWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVNGMVTVRGKFSVKSW 371
           DDI+  E+I + WE     +D+RIP+LL+  YC+ G+MEKAE++VN +V         +W
Sbjct: 330 DDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTW 389

Query: 372 CYLASRYLQKDQLPQAVETLKKAPSLCPSELKSVKEILAA---FLDGKQDVEETEKVVNL 412
             LA  Y    ++ +AVE  K+A  +     +  + +L +   +L+G++D+E   K++ L
Sbjct: 390 ERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRL 449

[Close]

BLAST of Chy12G215380 vs. TAIR 10
Match: AT2G20710.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 228.0 bits (580), Expect = 1.4e-59
Identity = 126/358 (35.20%), Postives = 212/358 (59.22%), Query Frame = 0


Query: 78  MSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNCYAHEKCV 137
           MS+ R   +S  D+AIR++LI +V GL + E +F  +P + + Y ++ ALLNCYA +K +
Sbjct: 1   MSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVL 60

Query: 138 DKANAFMQKIKEMEFER--------------------LDSLLKEMKETGVDYNQFTYTTR 197
            KA    Q++KE+ F +                    ++ LL+EM++  V  + FT  TR
Sbjct: 61  HKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTR 120

Query: 198 LSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISMLKKSKGLL 257
           L AY+  SD  G+EK + + E++  + LDW  Y   A  Y K GL +K++ ML+KS+ ++
Sbjct: 121 LHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMV 180

Query: 258 PTAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKK-EKIFNKGFISMITSLLILDDIKGA 317
             A+K+  A+ V +  Y   GKK+E++R+W+LYK+ +  +N G+IS+I++LL +DDI+  
Sbjct: 181 -NAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEV 240

Query: 318 ERIYKAWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVNGMVTVRGKFSVKSWCYLASR 377
           E+I + WE     +D+RIP+LL+  YC+ G+MEKAE++VN +V         +W  LA  
Sbjct: 241 EKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALG 300

Query: 378 YLQKDQLPQAVETLKKAPSLCPSELKSVKEILAA---FLDGKQDVEETEKVVNLLREK 412
           Y    ++ +AVE  K+A  +     +  + +L +   +L+G++D+E   K++ LL E+
Sbjct: 301 YKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSER 357

[Close]

BLAST of Chy12G215380 vs. TAIR 10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 172.6 bits (436), Expect = 7.0e-43
Identity = 103/325 (31.69%), Postives = 173/325 (53.23%), Query Frame = 0


Query: 72  LQISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNCY 131
           L++SKWM++      S  + A+ ++LI RV+G    E+YF N+  Q K  + + ALLNCY
Sbjct: 77  LEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCY 136

Query: 132 AHEKCVDKANAFMQKIKEMEF--------------------ERLDSLLKEMKETGVDYNQ 191
             ++ V+K+    +K+KEM F                    E++  +L+EMKE  V  + 
Sbjct: 137 VRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDN 196

Query: 192 FTYTTRLSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISMLK 251
           ++Y   ++A+    D   I   +  ME    I +DWN Y +AA  Y   G  D+++ +LK
Sbjct: 197 YSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLK 256

Query: 252 KSKGLLPTAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKK--EKIFNKGFISMITSLLI 311
            S+  L   KK G  +N  + LYAR GKK E+ R+W+L K   ++  N+ +++++ SL+ 
Sbjct: 257 MSENRL--EKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVK 316

Query: 312 LDDIKGAERIYKAWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVNGMVTVRGKFSV-K 371
           +D +  AE +   W++    YD R+PN ++  Y    + EKAE ++  +   RGK +  +
Sbjct: 317 IDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLAR-RGKATTPE 376

Query: 372 SWCYLASRYLQKDQLPQAVETLKKA 374
           SW  +A+ Y +K  L  A + +K A
Sbjct: 377 SWELVATAYAEKGTLENAFKCMKTA 398

[Close]

BLAST of Chy12G215380 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 168.7 bits (426), Expect = 1.0e-41
Identity = 107/366 (29.23%), Postives = 196/366 (53.55%), Query Frame = 0


Query: 72  LQISKWMSDK-RYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNC 131
           L++  WM+++   F LS +D AI+++LI +V G+   E++F  +P   K  +V+ +LLN 
Sbjct: 119 LEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNA 178

Query: 132 YAHEKCVDKANAFMQKIKE--------------------MEFERLDSLLKEMKETGVDYN 191
           Y   K  +KA A +  +++                     E++++D+++ EMK+  +  +
Sbjct: 179 YVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLD 238

Query: 192 QFTYTTRLSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISML 251
            ++Y   LS+  +      +E + +QM+S+ SI  +W  +   A  Y K+G  +K+   L
Sbjct: 239 IYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDAL 298

Query: 252 KKSKGLLPTAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKK--EKIFNKGFISMITSLL 311
           +K +  +    +    ++  L LY   G K E++R+W++YK     I N G+ ++++SL+
Sbjct: 299 RKVEARI--TGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLV 358

Query: 312 ILDDIKGAERIYKAWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVNGMVTVRGKFSVK 371
            + DI+GAE++Y+ W   K +YD RIPNLL++AY +   +E AE L + MV + GK S  
Sbjct: 359 RMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSS 418

Query: 372 SWCYLASRYLQKDQLPQAVETLKKAPSLCPSELKSVKEILAA----FLDGKQDVEETEKV 411
           +W  LA  + +K  + +A+  L+ A S   S     K ++ +      + + DV   E V
Sbjct: 419 TWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAV 478

[Close]

BLAST of Chy12G215380 vs. TAIR 10
Match: AT1G28020.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 162.2 bits (409), Expect = 9.5e-40
Identity = 99/288 (34.38%), Postives = 156/288 (54.17%), Query Frame = 0


Query: 72  LQISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFNNMPSQLKRYQVHIALLNCY 131
           LQ+S+WMS ++   L   D A R++LI  V GLE+ E +F ++P   +   V+ +LLN Y
Sbjct: 88  LQVSEWMSKEKICNLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSY 147

Query: 132 AH-EKCVDKANAFMQKIKEMEF--------------------ERLDSLLKEMKETGVDYN 191
           A  +K + KA A  QK++++                      E+++ LL EMK+  V+ +
Sbjct: 148 ARSDKTLCKAEATFQKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEAD 207

Query: 192 QFTYTTRLSAYATASDFTGIEKIMEQMESNTSIVLDWNCYVIAAIAYNKVGLIDKSISML 251
             T    L  Y+   D T +EK + + E    I L+W+  +  A AY +     K++ ML
Sbjct: 208 NVTVNNVLKLYSAVCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKML 267

Query: 252 KKSKGLLPTAKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKE--KIFNKGFISMITSLL 311
           + ++ L+     K  A++  +KLY   G ++E+ R+W LYK +  +  N G+ ++I SLL
Sbjct: 268 RLTEQLVDQKSLKS-AYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLL 327

Query: 312 ILDDIKGAERIYKAWETRKLAYDLRIPNLLVDAYCRAGLMEKAEDLVN 337
            +DDI GAE IYK WE+  L +D RIP +L   Y   G+ EKAE L+N
Sbjct: 328 KVDDIVGAEEIYKVWESLPLEFDHRIPTMLASGYRDRGMTEKAEKLMN 374

The following BLAST results are available for this feature:

BLAST of Chy12G215380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKU6	1.1e-61	35.99	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]
Q84JR3	9.9e-42	31.69	Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop...	[more]
Q8LPS6	1.4e-40	29.23	Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX...	[more]
Q9C7F1	1.3e-38	34.38	Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis th...	[more]
O22714	3.0e-38	27.32	Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX...	[more]

BLAST of Chy12G215380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV44	4.7e-172	84.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073790 PE=4 SV=1	[more]
A0A5D3DSH1	4.9e-169	82.40	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7UP59	4.9e-169	82.40	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B572	4.9e-169	82.40	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cuc...	[more]
A0A5D3DRU6	1.3e-153	76.52	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Chy12G215380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653157.2	4.99e-218	84.99	pentatricopeptide repeat-containing protein At2g20710, mitochondrial isoform X1 ...	[more]
XP_031744923.1	7.94e-215	85.01	pentatricopeptide repeat-containing protein At2g20710, mitochondrial isoform X2 ...	[more]
XP_008442434.1	2.08e-213	82.40	PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-...	[more]
KAA0056984.1	3.64e-206	82.40	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008442448.1	4.70e-193	76.52	PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-...	[more]

BLAST of Chy12G215380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20710.1	8.0e-63	35.99	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20710.2	1.4e-59	35.20	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21705.1	7.0e-43	31.69	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G02150.1	1.0e-41	29.23	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G28020.1	9.5e-40	34.38	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 102..278 e-value: 5.6E-14 score: 54.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 279..421 e-value: 2.5E-9 score: 39.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 208..396
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 316..339 e-value: 1.4E-4 score: 21.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 316..339 e-value: 1.8E-4 score: 19.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 157..200 e-value: 1.2E-4 score: 22.1
None	No IPR available	PANTHER	PTHR45717:SF28	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 151..412 coord: 72..154
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 151..412 coord: 72..154
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 347..380 score: 8.7914

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G215380.1	Chy12G215380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009058	biosynthetic process
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0005515	protein binding