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Chy12G215030 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATAGCGTAGCAAACCTGCCATTGTTCGCAGCGAGCGTAAGTACCAAGCGAACCACAGTATTCAGCTTCAGCAACAACAAACTACACCCCATTAGATCCATGAGAGCTGTTGTCCAGAGAGTCGCCTCTGCAAGCGTCCAGGTCTCCTCTCTCTCTTTTCCTCTCTTAATGCTTTTCTAAATCGCCGGTGTGAGATACTGCATTTCACAGGTCGATGGCCGCACCGTTTCAGAGATCGGCCAAGGTCTCCTCGTGCTCGTCGGCCTTCACGACTCCGACTCCGACACCGACGCTGAATACATGTAATCTACTCTACCCATCACCCACCCACCCCCCCCCCCCCCCCCTCCCTCTCTTTTCTATACTGATTCCATCCGGCATTAAAACTTCTTTTCAAATTGGGTTTCAGATGCCGTAAGGTCCTAAATATGAGGTTGTTCCCAAATGAGAGTACCGGCAAAGCTTGGGACTTAAACGTAGTTTAATTATCCATACACTCCTTGCTTCCTTATTCCGAATTAAACAAAAGCTTCAGGATTTGCTTTATTACTTTCCTTGATATTTCTTCCAGGTGATGCAGAAAAACTACGAGGTTCTATTAGGTAAGTGAAAAGAGGTTTGGGCTTTGCTTCGAAGTTTGTACCTAGAATGTGAATTGGAGTTAATCCACTAATTAACTTAATACTTGGTGGATTGCAACCAGTCAGCCAGTTTACCCTGTATGGAATGTTGAAGGGGAACAAGCCGGACTTTCATGTGGCAATGCCTCCCCAAAGAGCTAAACCTTTCTACAATTCTGTGGTCGAGAGGTTCGGTAAATCCTACAACCCAGATGCGATAAAAGGTAACCTATCTTCCCTAATATGAAATTCAGTCTATATGCAAAATAGGAACGGGTTCAACCAGTAGTATTAAGAGTTTACTGAATCTTGTCTTTGTTCCCTTTTCCTGTGGGTAGATGGAGTGTTTGGAGCAATTATGAAGGTAATCTCACTATGCTCAGTTTTGGATTCCGAGTAACTCTGATATTTACTAGAGTATACAGTTTTGATGTTTTGGGCACTGATGTTTGAGAAGGTCAATTTGGTGAATGATGGCCCAGTCACAATGCAGATAGACTCCCAACCGTCTAAGTAAGGAAATCTACCAATATATGAGCTCTCCTTCCAGCTGCAGTATGTTCAGGAAAATGTTAGTTTGACTGATTTTCTCATTCATTTCAGGAATACAGTTGAGGCTTCAGAAGACTCGTAATTGGTTTCTACAATTTAAGATCTGGCTGGGATTCTTTGTGGGCTAACAAGTTGGAGTTGCTTGATGGGCTGAAAGATTCTTTACATCAAGGTGTAGCTGTTTATGTCCTCTTGTGCTTGGCCGTGGGGTTGTATGCAAACTTGCTCCTCTGA ATGAATAGCGTAGCAAACCTGCCATTGTTCGCAGCGAGCGTAAGTACCAAGCGAACCACAGTATTCAGCTTCAGCAACAACAAACTACACCCCATTAGATCCATGAGAGCTGTTGTCCAGAGAGTCGCCTCTGCAAGCGTCCAGGTCGATGGCCGCACCGTTTCAGAGATCGGCCAAGGTCTCCTCGTGCTCGTCGGCCTTCACGACTCCGACTCCGACACCGACGCTGAATACATATGCCGTAAGGTCCTAAATATGAGGTTGTTCCCAAATGAGAGTACCGGCAAAGCTTGGGACTTAAACGTGATGCAGAAAAACTACGAGGTTCTATTAGTCAGCCAGTTTACCCTGTATGGAATGTTGAAGGGGAACAAGCCGGACTTTCATGTGGCAATGCCTCCCCAAAGAGCTAAACCTTTCTACAATTCTGTGGTCGAGAGGTTCGGTAAATCCTACAACCCAGATGCGATAAAAGATGGAGTGTTTGGAGCAATTATGAAGGTCAATTTGGTGAATGATGGCCCAGTCACAATGCAGATAGACTCCCAACCGTCTAAATCTGGCTGGGATTCTTTGTGGGCTAACAAGTTGGAGTTGCTTGATGGGCTGAAAGATTCTTTACATCAAGGTGTAGCTGTTTATGTCCTCTTGTGCTTGGCCGTGGGGTTGTATGCAAACTTGCTCCTCTGA ATGAATAGCGTAGCAAACCTGCCATTGTTCGCAGCGAGCGTAAGTACCAAGCGAACCACAGTATTCAGCTTCAGCAACAACAAACTACACCCCATTAGATCCATGAGAGCTGTTGTCCAGAGAGTCGCCTCTGCAAGCGTCCAGGTCGATGGCCGCACCGTTTCAGAGATCGGCCAAGGTCTCCTCGTGCTCGTCGGCCTTCACGACTCCGACTCCGACACCGACGCTGAATACATATGCCGTAAGGTCCTAAATATGAGGTTGTTCCCAAATGAGAGTACCGGCAAAGCTTGGGACTTAAACGTGATGCAGAAAAACTACGAGGTTCTATTAGTCAGCCAGTTTACCCTGTATGGAATGTTGAAGGGGAACAAGCCGGACTTTCATGTGGCAATGCCTCCCCAAAGAGCTAAACCTTTCTACAATTCTGTGGTCGAGAGGTTCGGTAAATCCTACAACCCAGATGCGATAAAAGATGGAGTGTTTGGAGCAATTATGAAGGTCAATTTGGTGAATGATGGCCCAGTCACAATGCAGATAGACTCCCAACCGTCTAAATCTGGCTGGGATTCTTTGTGGGCTAACAAGTTGGAGTTGCTTGATGGGCTGAAAGATTCTTTACATCAAGGTGTAGCTGTTTATGTCCTCTTGTGCTTGGCCGTGGGGTTGTATGCAAACTTGCTCCTCTGA MNSVANLPLFAASVSTKRTTVFSFSNNKLHPIRSMRAVVQRVASASVQVDGRTVSEIGQGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYNSVVERFGKSYNPDAIKDGVFGAIMKVNLVNDGPVTMQIDSQPSKSGWDSLWANKLELLDGLKDSLHQGVAVYVLLCLAVGLYANLLL* Homology
BLAST of Chy12G215030 vs. ExPASy Swiss-Prot
Match: Q54EY1 (D-aminoacyl-tRNA deacylase OS=Dictyostelium discoideum OX=44689 GN=dtd PE=3 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 2.2e-43 Identity = 82/149 (55.03%), Postives = 110/149 (73.83%), Query Frame = 0
BLAST of Chy12G215030 vs. ExPASy Swiss-Prot
Match: Q9DD18 (D-aminoacyl-tRNA deacylase 1 OS=Mus musculus OX=10090 GN=Dtd1 PE=1 SV=2) HSP 1 Score: 176.4 bits (446), Expect = 3.7e-43 Identity = 88/165 (53.33%), Postives = 120/165 (72.73%), Query Frame = 0
BLAST of Chy12G215030 vs. ExPASy Swiss-Prot
Match: Q8TEA8 (D-aminoacyl-tRNA deacylase 1 OS=Homo sapiens OX=9606 GN=DTD1 PE=1 SV=2) HSP 1 Score: 173.3 bits (438), Expect = 3.1e-42 Identity = 86/165 (52.12%), Postives = 120/165 (72.73%), Query Frame = 0
BLAST of Chy12G215030 vs. ExPASy Swiss-Prot
Match: Q2T9V8 (D-aminoacyl-tRNA deacylase 1 OS=Bos taurus OX=9913 GN=DTD1 PE=2 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 2.0e-41 Identity = 84/165 (50.91%), Postives = 118/165 (71.52%), Query Frame = 0
BLAST of Chy12G215030 vs. ExPASy Swiss-Prot
Match: F1QGC8 (D-aminoacyl-tRNA deacylase 1 OS=Danio rerio OX=7955 GN=dtd1 PE=1 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.2e-40 Identity = 78/151 (51.66%), Postives = 112/151 (74.17%), Query Frame = 0
BLAST of Chy12G215030 vs. ExPASy TrEMBL
Match: A0A0A0LS01 (D-aminoacyl-tRNA deacylase OS=Cucumis sativus OX=3659 GN=Csa_1G076620 PE=3 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 1.8e-96 Identity = 181/187 (96.79%), Postives = 183/187 (97.86%), Query Frame = 0
BLAST of Chy12G215030 vs. ExPASy TrEMBL
Match: A0A5A7UU37 (D-aminoacyl-tRNA deacylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002050 PE=3 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 1.3e-94 Identity = 179/188 (95.21%), Postives = 183/188 (97.34%), Query Frame = 0
BLAST of Chy12G215030 vs. ExPASy TrEMBL
Match: A0A1S3B6T2 (D-aminoacyl-tRNA deacylase OS=Cucumis melo OX=3656 GN=LOC103486664 PE=3 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 1.3e-94 Identity = 179/188 (95.21%), Postives = 183/188 (97.34%), Query Frame = 0
BLAST of Chy12G215030 vs. ExPASy TrEMBL
Match: A0A6J1CHG7 (D-aminoacyl-tRNA deacylase OS=Momordica charantia OX=3673 GN=LOC111010928 PE=3 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 1.8e-88 Identity = 169/187 (90.37%), Postives = 174/187 (93.05%), Query Frame = 0
BLAST of Chy12G215030 vs. ExPASy TrEMBL
Match: A0A6J1EH34 (D-aminoacyl-tRNA deacylase OS=Cucurbita moschata OX=3662 GN=LOC111434135 PE=3 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 3.9e-88 Identity = 168/187 (89.84%), Postives = 177/187 (94.65%), Query Frame = 0
BLAST of Chy12G215030 vs. NCBI nr
Match: KGN64710.1 (hypothetical protein Csa_014221 [Cucumis sativus]) HSP 1 Score: 361 bits (926), Expect = 1.28e-124 Identity = 181/187 (96.79%), Postives = 183/187 (97.86%), Query Frame = 0
BLAST of Chy12G215030 vs. NCBI nr
Match: XP_011653368.2 (D-aminoacyl-tRNA deacylase [Cucumis sativus]) HSP 1 Score: 361 bits (926), Expect = 6.51e-124 Identity = 181/187 (96.79%), Postives = 183/187 (97.86%), Query Frame = 0
BLAST of Chy12G215030 vs. NCBI nr
Match: XP_008442903.1 (PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase [Cucumis melo] >KAA0057021.1 D-tyrosyl-tRNA(Tyr) deacylase [Cucumis melo var. makuwa]) HSP 1 Score: 355 bits (910), Expect = 3.64e-122 Identity = 179/188 (95.21%), Postives = 183/188 (97.34%), Query Frame = 0
BLAST of Chy12G215030 vs. NCBI nr
Match: XP_038894530.1 (D-aminoacyl-tRNA deacylase [Benincasa hispida]) HSP 1 Score: 340 bits (872), Expect = 2.01e-116 Identity = 172/187 (91.98%), Postives = 177/187 (94.65%), Query Frame = 0
BLAST of Chy12G215030 vs. NCBI nr
Match: XP_022140203.1 (D-tyrosyl-tRNA(Tyr) deacylase [Momordica charantia]) HSP 1 Score: 334 bits (857), Expect = 3.88e-114 Identity = 169/187 (90.37%), Postives = 174/187 (93.05%), Query Frame = 0
BLAST of Chy12G215030 vs. TAIR 10
Match: AT4G18460.1 (D-Tyr-tRNA(Tyr) deacylase family protein ) HSP 1 Score: 254.6 bits (649), Expect = 7.6e-68 Identity = 118/151 (78.15%), Postives = 138/151 (91.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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