Chy12G213560 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G213560
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	NDR1/HIN1-like protein 12
Location	chrH12: 11644356 .. 11645474 (-)
RNA-Seq Expression	Chy12G213560
Synteny	Chy12G213560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAGCATTACTACAACAAAAGGAGAAGCATCATCGTCAAAAAAAAGCTCTAAAGGGCAAAATGAGACAACAAAAAAGACAAGAATTATAAGAATCATAGGAAGAAGTTTGTTGAGTGTAATATTTCTTGTTGGTCTTGCAATGGTCATATGTTGGCTTGTCGTGTTCCCCAAAAATCCTCGTATCTTTGTGGAAACTGGAAGAGTCATAGGCCACAATTCAACTCATAATATGCTCAATGCCACCATAGTTTTCACTGTTAAATGCTACAACCCCAACAAAAGAGCCTCCATTCATTTGCACTCTATGAGGATGATAGTTACTAGTATGGGCCAGACATTTTCGTCCGTCATCCCGACATTCATGCAGACGCCTGGAAACCAAACCGTCTTGTCGCCTGCTGTCGAGGTCAACTTCGACTACCCATTCGGGCACCAGGAAGAGATAAATCCGGAGCTTCACTTCTCTGCTGAAATTAGGTATACATATCTTGAGTGCATTTTAATATACACCTATCTTTGTGCATTCCAATCACATCACACCCACTTCATAATAATATAATAAAATATTTGATAAATAATAAAGGATAATCTGACGCATGAAAAATTATGATTAAAAAAATTGATAGTATATACAAATATAGGTGTGGTGTGGTGTGGGACACTTAGTTATTTTTTTATATATATAGTCTATTGTTAGGTTTTACTGAGGTCAATTTTTTTTTTTTACATTTAAAATTAAATGTTTGTGGCCTGTGGGTACTTCATGGAATAAAATCTTTAGTTTACCTCCTTTTTCACCTAAATCACTAACGTGATAACTAGTTCTTGTGGTTAGATTTTGAAAATTAACTAGGCTTACTTCTACAAATAAATATTTTTCTTTTGTCATCTTTGTTTCTACTTTTAAAATGTAGGCCTATTTTCTAACCCTGAAAAGTAGTTCTTAAAATTTTGTTTCAATCTAATTTGTAATTTCGGCTCTGTTGTTATCAGCTATAGTGTCGAGCACTGGACATCGAGACCTCGGTTGCTCCTAATCTATTGTAATAATCTCCTGTTGAGGATCAATGATACTAGAACTTTTGAGAATACCAAATGCAATGTGGATCTTTGA

mRNA sequence

ATGAGGAGCATTACTACAACAAAAGGAGAAGCATCATCGTCAAAAAAAAGCTCTAAAGGGCAAAATGAGACAACAAAAAAGACAAGAATTATAAGAATCATAGGAAGAAGTTTGTTGAGTGTAATATTTCTTGTTGGTCTTGCAATGGTCATATGTTGGCTTGTCGTGTTCCCCAAAAATCCTCGTATCTTTGTGGAAACTGGAAGAGTCATAGGCCACAATTCAACTCATAATATGCTCAATGCCACCATAGTTTTCACTGTTAAATGCTACAACCCCAACAAAAGAGCCTCCATTCATTTGCACTCTATGAGGATGATAGTTACTAGTATGGGCCAGACATTTTCGTCCGTCATCCCGACATTCATGCAGACGCCTGGAAACCAAACCGTCTTGTCGCCTGCTGTCGAGGTCAACTTCGACTACCCATTCGGGCACCAGGAAGAGATAAATCCGGAGCTTCACTTCTCTGCTGAAATTAGCTATAGTGTCGAGCACTGGACATCGAGACCTCGGTTGCTCCTAATCTATTGTAATAATCTCCTGTTGAGGATCAATGATACTAGAACTTTTGAGAATACCAAATGCAATGTGGATCTTTGA

Coding sequence (CDS)

ATGAGGAGCATTACTACAACAAAAGGAGAAGCATCATCGTCAAAAAAAAGCTCTAAAGGGCAAAATGAGACAACAAAAAAGACAAGAATTATAAGAATCATAGGAAGAAGTTTGTTGAGTGTAATATTTCTTGTTGGTCTTGCAATGGTCATATGTTGGCTTGTCGTGTTCCCCAAAAATCCTCGTATCTTTGTGGAAACTGGAAGAGTCATAGGCCACAATTCAACTCATAATATGCTCAATGCCACCATAGTTTTCACTGTTAAATGCTACAACCCCAACAAAAGAGCCTCCATTCATTTGCACTCTATGAGGATGATAGTTACTAGTATGGGCCAGACATTTTCGTCCGTCATCCCGACATTCATGCAGACGCCTGGAAACCAAACCGTCTTGTCGCCTGCTGTCGAGGTCAACTTCGACTACCCATTCGGGCACCAGGAAGAGATAAATCCGGAGCTTCACTTCTCTGCTGAAATTAGCTATAGTGTCGAGCACTGGACATCGAGACCTCGGTTGCTCCTAATCTATTGTAATAATCTCCTGTTGAGGATCAATGATACTAGAACTTTTGAGAATACCAAATGCAATGTGGATCTTTGA

Protein sequence

MRSITTTKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIGHNSTHNMLNATIVFTVKCYNPNKRASIHLHSMRMIVTSMGQTFSSVIPTFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNNLLLRINDTRTFENTKCNVDL*

Homology

[Close]

BLAST of Chy12G213560 vs. ExPASy Swiss-Prot
Match: Q8VZ13 (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.3e-07
Identity = 53/181 (29.28%), Postives = 86/181 (47.51%), Query Frame = 0


Query: 37  SLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRV----IGHNSTHNMLNATIVFTVKCYN 96
           +L+ +  LVGLA++I +L + PK     VE   V    IG+N  H  +NA   + +K YN
Sbjct: 43  ALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDH--INAKFSYVIKSYN 102

Query: 97  PNKRASIHLHSMRMIVTSMGQTFS-SVIPTFMQTPGNQT-----VLSPAVEVN-FDYPFG 156
           P K  S+  HSMR+      Q+ +   I  F Q P N+T     ++S  V ++ F+    
Sbjct: 103 PEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDL 162

Query: 157 HQEE----INPELHFSAEISYSVEHWTSRPRLLLIYCNNLLLRINDTRT--FENTKCNVD 201
             E+    I  E++ +A +SY    + SR R L   C  +++ +  +    F+   C   
Sbjct: 163 RAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTR 221

[Close]

BLAST of Chy12G213560 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.6e-05
Identity = 32/111 (28.83%), Postives = 57/111 (51.35%), Query Frame = 0


Query: 30  IIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRV--IGHNSTHNMLNATIVFT 89
           ++ +  + ++S+I ++G+A +I WL+V P+  +  V    +    H S  N+L   +  T
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 90  VKCYNPNKRASIHLHSMRMIVTSMGQTFSSVIPT-FMQTPGNQTVLSPAVE 138
           V   NPNKR  ++   +       G+ FS++  T F Q   N TVL+P  +
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQ 147

[Close]

BLAST of Chy12G213560 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 6.6e-04
Identity = 31/121 (25.62%), Postives = 58/121 (47.93%), Query Frame = 0


Query: 21  QNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIGHN---STH 80
           +N    + ++IR I  S++ V+F++ L +++ W ++ P  PR  ++   V   N   +  
Sbjct: 5   ENHGHSRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPP 64

Query: 81  NMLNATIVFTVKCYNPNKRASIHLHSMRMIVTSMGQ--TFSSVIPTFMQTPGNQTVLSPA 137
           N+L +    T+   NPN +  I+   + +  T   Q  TF + IP   Q   +  + SP 
Sbjct: 65  NLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSPF 124

[Close]

BLAST of Chy12G213560 vs. ExPASy TrEMBL
Match: A0A0A0LVK9 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132770 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 9.9e-104
Identity = 195/200 (97.50%), Postives = 196/200 (98.00%), Query Frame = 0


Query: 1   MRSITTTKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60
           MRS TT KGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN
Sbjct: 1   MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60

Query: 61  PRIFVETGRVIGHNSTHNMLNATIVFTVKCYNPNKRASIHLHSMRMIVTSMGQTFSSVIP 120
           PRIFVETGRVI HNSTHNMLNATIVFTVKCYNPNKRAS+HLHSMRMIVTSMGQ FSSVIP
Sbjct: 61  PRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIP 120

Query: 121 TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN 180
           TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN
Sbjct: 121 TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN 180

Query: 181 LLLRINDTRTFENTKCNVDL 201
           LLLRINDTRTFENTKCNVDL
Sbjct: 181 LLLRINDTRTFENTKCNVDL 200

[Close]

BLAST of Chy12G213560 vs. ExPASy TrEMBL
Match: A0A5A7TF76 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold534G00100 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.6e-98
Identity = 184/200 (92.00%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 1   MRSITTTKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60
           MRSITTTKGEASSS+KSSKGQNETTKKTRIIRIIGR LLSVIFLVGLAMVICWLVVFPKN
Sbjct: 1   MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKN 60

Query: 61  PRIFVETGRVIGHNSTHNMLNATIVFTVKCYNPNKRASIHLHSMRMIVTSMGQTFSSVIP 120
           PR  VETG+VI HNSTHNMLNATI FTVKCYNPNKRASIHLHSMRMI+TSMGQ FSS +P
Sbjct: 61  PRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMP 120

Query: 121 TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN 180
            FMQTPGNQTVLSPAV+VNFDYPFGH+EEINPELHFSAEISYSV HWTSRPRLL IYCNN
Sbjct: 121 MFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNN 180

Query: 181 LLLRINDTRTFENTKCNVDL 201
           LLLRINDTRTFENTKCNVDL
Sbjct: 181 LLLRINDTRTFENTKCNVDL 200

[Close]

BLAST of Chy12G213560 vs. ExPASy TrEMBL
Match: A0A1S3CGR5 (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103500709 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.6e-98
Identity = 184/200 (92.00%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 1   MRSITTTKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60
           MRSITTTKGEASSS+KSSKGQNETTKKTRIIRIIGR LLSVIFLVGLAMVICWLVVFPKN
Sbjct: 1   MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKN 60

Query: 61  PRIFVETGRVIGHNSTHNMLNATIVFTVKCYNPNKRASIHLHSMRMIVTSMGQTFSSVIP 120
           PR  VETG+VI HNSTHNMLNATI FTVKCYNPNKRASIHLHSMRMI+TSMGQ FSS +P
Sbjct: 61  PRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMP 120

Query: 121 TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN 180
            FMQTPGNQTVLSPAV+VNFDYPFGH+EEINPELHFSAEISYSV HWTSRPRLL IYCNN
Sbjct: 121 MFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNN 180

Query: 181 LLLRINDTRTFENTKCNVDL 201
           LLLRINDTRTFENTKCNVDL
Sbjct: 181 LLLRINDTRTFENTKCNVDL 200

[Close]

BLAST of Chy12G213560 vs. ExPASy TrEMBL
Match: A0A1S3CGS4 (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 5.3e-65
Identity = 126/176 (71.59%), Postives = 148/176 (84.09%), Query Frame = 0


Query: 25  TKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIGHNSTHNMLNATI 84
           TK+TR+IR++GRSLL VIFLV L M+ICWLVV PK PR+ VETG+V+ H+ST +MLNATI
Sbjct: 13  TKRTRLIRLVGRSLLGVIFLVALGMIICWLVVIPKTPRLIVETGKVVVHSSTISMLNATI 72

Query: 85  VFTVKCYNPNKRASIHLHSMRMIVTSMGQTFSSVIPTFMQTPGNQTVLSPAVEVNFDYPF 144
            FTVK YNPNKRASIH+  MRMIV +MG  FSS IP+F  TP NQTVL  AV+VNF+YPF
Sbjct: 73  AFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLWSAVQVNFEYPF 132

Query: 145 GHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNNLLLRINDTRTFENTKCNVDL 201
           G+ EEINPEL FSAE+SYSVE W S+PRLL IYCN+LLL+IND+ TF+NTKC VDL
Sbjct: 133 GYTEEINPELQFSAEVSYSVEKWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL 188

[Close]

BLAST of Chy12G213560 vs. ExPASy TrEMBL
Match: A0A0A0LY09 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132760 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 4.5e-64
Identity = 129/199 (64.82%), Postives = 155/199 (77.89%), Query Frame = 0


Query: 1   MRSITTTKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60
           MRS TTT              +  TK+TR+IR++GRSLL VIFLV L M+ICWLVV PK+
Sbjct: 1   MRSTTTTT------------THGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKS 60

Query: 61  PRIFVETGRVIGHNSTHNMLNATIVFTVKCYNPNKRASIHLHSMRMIVTSMGQTFSSVIP 120
           PR+ VETG+VI H+ST +MLNATI FTVK YNPNKRASIH+  MRMIV +MG  FSS IP
Sbjct: 61  PRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIP 120

Query: 121 TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN 180
           +F  TP NQTVLS AV+VNF+YPFG+ EEINPEL FSAE+SYS++ W S+PRLL IYCN+
Sbjct: 121 SFTLTPRNQTVLSSAVQVNFEYPFGYTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNH 180

Query: 181 LLLRINDTRTFENTKCNVD 200
           +LL+IND+  F+NTKC VD
Sbjct: 181 ILLKINDSTAFDNTKCKVD 187

[Close]

BLAST of Chy12G213560 vs. NCBI nr
Match: XP_011648454.1 (uncharacterized protein LOC105434469 [Cucumis sativus] >KGN64867.1 hypothetical protein Csa_022804 [Cucumis sativus])

HSP 1 Score: 386 bits (992), Expect = 4.16e-135
Identity = 195/200 (97.50%), Postives = 196/200 (98.00%), Query Frame = 0


Query: 1   MRSITTTKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60
           MRS TT KGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN
Sbjct: 1   MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60

Query: 61  PRIFVETGRVIGHNSTHNMLNATIVFTVKCYNPNKRASIHLHSMRMIVTSMGQTFSSVIP 120
           PRIFVETGRVI HNSTHNMLNATIVFTVKCYNPNKRAS+HLHSMRMIVTSMGQ FSSVIP
Sbjct: 61  PRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIP 120

Query: 121 TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN 180
           TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN
Sbjct: 121 TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN 180

Query: 181 LLLRINDTRTFENTKCNVDL 200
           LLLRINDTRTFENTKCNVDL
Sbjct: 181 LLLRINDTRTFENTKCNVDL 200

[Close]

BLAST of Chy12G213560 vs. NCBI nr
Match: XP_008462337.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >KAA0040676.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa] >TYK08761.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 368 bits (944), Expect = 8.64e-128
Identity = 184/200 (92.00%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 1   MRSITTTKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60
           MRSITTTKGEASSS+KSSKGQNETTKKTRIIRIIGR LLSVIFLVGLAMVICWLVVFPKN
Sbjct: 1   MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKN 60

Query: 61  PRIFVETGRVIGHNSTHNMLNATIVFTVKCYNPNKRASIHLHSMRMIVTSMGQTFSSVIP 120
           PR  VETG+VI HNSTHNMLNATI FTVKCYNPNKRASIHLHSMRMI+TSMGQ FSS +P
Sbjct: 61  PRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMP 120

Query: 121 TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN 180
            FMQTPGNQTVLSPAV+VNFDYPFGH+EEINPELHFSAEISYSV HWTSRPRLL IYCNN
Sbjct: 121 MFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNN 180

Query: 181 LLLRINDTRTFENTKCNVDL 200
           LLLRINDTRTFENTKCNVDL
Sbjct: 181 LLLRINDTRTFENTKCNVDL 200

[Close]

BLAST of Chy12G213560 vs. NCBI nr
Match: XP_038895359.1 (NDR1/HIN1-like protein 10 [Benincasa hispida])

HSP 1 Score: 263 bits (673), Expect = 1.75e-86
Identity = 138/199 (69.35%), Postives = 163/199 (81.91%), Query Frame = 0


Query: 5   TTTKGEASS--SKKSS-KGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNP 64
           T T+GE SS  SK+SS + Q+ T K+TRIIRIIGRSLL VIFLVGLA++ICWLVV PK P
Sbjct: 4   TATQGETSSPSSKQSSYRQQHGTAKRTRIIRIIGRSLLGVIFLVGLAIIICWLVVVPKTP 63

Query: 65  RIFVETGRVIGHNSTHNMLNATIVFTVKCYNPNKRASIHLHSMRMIVTSMGQTFSSVIPT 124
           R+ VETG VI H+STHNML ATIVFT + YNPNKRA+IH++SMRMIV S+G+ F S IP+
Sbjct: 64  RLIVETGNVIVHSSTHNMLKATIVFTFRSYNPNKRATIHMYSMRMIVNSIGERFLSDIPS 123

Query: 125 FMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNNL 184
           F  TP NQTVLS AV VNF+YPFG  EEI+PEL FSAE+SYS+  W S+PRLL IYCN+L
Sbjct: 124 FTLTPENQTVLSSAVRVNFEYPFGFNEEIDPELRFSAEVSYSINGWMSKPRLLEIYCNHL 183

Query: 185 LLRINDTRTFENTKCNVDL 200
           LL+IN + TF+NTKC VDL
Sbjct: 184 LLKINASTTFDNTKCKVDL 202

[Close]

BLAST of Chy12G213560 vs. NCBI nr
Match: XP_038895526.1 (NDR1/HIN1-like protein 26 isoform X1 [Benincasa hispida])

HSP 1 Score: 262 bits (669), Expect = 5.42e-86
Identity = 132/193 (68.39%), Postives = 157/193 (81.35%), Query Frame = 0


Query: 8   KGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVET 67
           +G   +SK+ S  ++ TTK+TRIIRIIGRSLLSVI L+GLA++ CW+VVFPK PR  VET
Sbjct: 2   RGNIEASKQRSNEKHGTTKRTRIIRIIGRSLLSVIILIGLAIITCWIVVFPKTPRFLVET 61

Query: 68  GRVIGHNSTHNMLNATIVFTVKCYNPNKRASIHLHSMRMIVTSMGQTFSSVIPTFMQTPG 127
           G+VI  +ST  MLNATI +TVK YNPNKRASIH+ SMRMIVT+MGQTFSS IPTF Q PG
Sbjct: 62  GQVIAISSTRTMLNATIAYTVKSYNPNKRASIHMDSMRMIVTNMGQTFSSDIPTFTQKPG 121

Query: 128 NQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNNLLLRIND 187
           N TVLS AV+ NF+YPFG +EEI+P L F A++SYSVE W S+PRLL IYC+ L L IND
Sbjct: 122 NLTVLSSAVQGNFEYPFGFKEEIDPNLRFEAKVSYSVERWMSKPRLLEIYCDRLWLLIND 181

Query: 188 TRTFENTKCNVDL 200
           +RTFENT+C VDL
Sbjct: 182 SRTFENTECKVDL 194

[Close]

BLAST of Chy12G213560 vs. NCBI nr
Match: XP_008462348.1 (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 258 bits (660), Expect = 1.04e-84
Identity = 126/176 (71.59%), Postives = 148/176 (84.09%), Query Frame = 0


Query: 25  TKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIGHNSTHNMLNATI 84
           TK+TR+IR++GRSLL VIFLV L M+ICWLVV PK PR+ VETG+V+ H+ST +MLNATI
Sbjct: 13  TKRTRLIRLVGRSLLGVIFLVALGMIICWLVVIPKTPRLIVETGKVVVHSSTISMLNATI 72

Query: 85  VFTVKCYNPNKRASIHLHSMRMIVTSMGQTFSSVIPTFMQTPGNQTVLSPAVEVNFDYPF 144
            FTVK YNPNKRASIH+  MRMIV +MG  FSS IP+F  TP NQTVL  AV+VNF+YPF
Sbjct: 73  AFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLWSAVQVNFEYPF 132

Query: 145 GHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNNLLLRINDTRTFENTKCNVDL 200
           G+ EEINPEL FSAE+SYSVE W S+PRLL IYCN+LLL+IND+ TF+NTKC VDL
Sbjct: 133 GYTEEINPELQFSAEVSYSVEKWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL 188

[Close]

BLAST of Chy12G213560 vs. TAIR 10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 62.4 bits (150), Expect = 4.8e-10
Identity = 48/187 (25.67%), Postives = 89/187 (47.59%), Query Frame = 0


Query: 26  KKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIGHNSTH-NMLNATI 85
           ++  +I  I   +L++IF+  +  +I WL   PK  R  VE   V   N T+ N ++AT 
Sbjct: 21  RRPSLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATF 80

Query: 86  VFTVKCYNPNKRASIHLHSMRMIVTSMGQTFS-SVIPTFMQTPGN-----QTVLSPAVEV 145
            FT++ +NPN R S++  S+ + V    QT +   +  F Q   N     +T+++  V V
Sbjct: 81  QFTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQIDETLIAENVAV 140

Query: 146 NFDYPFGHQEE-----INPELHFSAEISYSVEHWTSRPRLLLIYCNNLLLRINDTRTFEN 201
           +       + +     I  E+   A + + V  W S  R   I C+++ + ++     +N
Sbjct: 141 SKSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLSQPNKSQN 200

[Close]

BLAST of Chy12G213560 vs. TAIR 10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 58.2 bits (139), Expect = 9.1e-09
Identity = 53/181 (29.28%), Postives = 86/181 (47.51%), Query Frame = 0


Query: 37  SLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRV----IGHNSTHNMLNATIVFTVKCYN 96
           +L+ +  LVGLA++I +L + PK     VE   V    IG+N  H  +NA   + +K YN
Sbjct: 43  ALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDH--INAKFSYVIKSYN 102

Query: 97  PNKRASIHLHSMRMIVTSMGQTFS-SVIPTFMQTPGNQT-----VLSPAVEVN-FDYPFG 156
           P K  S+  HSMR+      Q+ +   I  F Q P N+T     ++S  V ++ F+    
Sbjct: 103 PEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDL 162

Query: 157 HQEE----INPELHFSAEISYSVEHWTSRPRLLLIYCNNLLLRINDTRT--FENTKCNVD 201
             E+    I  E++ +A +SY    + SR R L   C  +++ +  +    F+   C   
Sbjct: 163 RAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTR 221

[Close]

BLAST of Chy12G213560 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 49.7 bits (117), Expect = 3.2e-06
Identity = 32/111 (28.83%), Postives = 57/111 (51.35%), Query Frame = 0


Query: 30  IIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRV--IGHNSTHNMLNATIVFT 89
           ++ +  + ++S+I ++G+A +I WL+V P+  +  V    +    H S  N+L   +  T
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 90  VKCYNPNKRASIHLHSMRMIVTSMGQTFSSVIPT-FMQTPGNQTVLSPAVE 138
           V   NPNKR  ++   +       G+ FS++  T F Q   N TVL+P  +
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQ 147

[Close]

BLAST of Chy12G213560 vs. TAIR 10
Match: AT4G01410.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 47.8 bits (112), Expect = 1.2e-05
Identity = 27/90 (30.00%), Postives = 48/90 (53.33%), Query Frame = 0


Query: 32  RIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIGHNST-HNMLNATIVFTVKC 91
           R I  ++ +++ ++G+  +I WLV  P  PR+ V    +   N T   +++ ++ F+V  
Sbjct: 42  RAICGAIFTILVILGIIALILWLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFSVLA 101

Query: 92  YNPNKRASIHLHSMRMIVTSMGQTFSSVIP 121
            NPN+R SIH   + M VT   Q  +  +P
Sbjct: 102 RNPNRRVSIHYDKLSMYVTYKDQIITPPLP 131

[Close]

BLAST of Chy12G213560 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 )

HSP 1 Score: 45.8 bits (107), Expect = 4.7e-05
Identity = 31/121 (25.62%), Postives = 58/121 (47.93%), Query Frame = 0


Query: 21  QNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIGHN---STH 80
           +N    + ++IR I  S++ V+F++ L +++ W ++ P  PR  ++   V   N   +  
Sbjct: 5   ENHGHSRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPP 64

Query: 81  NMLNATIVFTVKCYNPNKRASIHLHSMRMIVTSMGQ--TFSSVIPTFMQTPGNQTVLSPA 137
           N+L +    T+   NPN +  I+   + +  T   Q  TF + IP   Q   +  + SP 
Sbjct: 65  NLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSPF 124

The following BLAST results are available for this feature:

BLAST of Chy12G213560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZ13	1.3e-07	29.28	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P...	[more]
Q9SJ52	4.6e-05	28.83	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9SRN0	6.6e-04	25.62	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]

BLAST of Chy12G213560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVK9	9.9e-104	97.50	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132770 PE=4 ...	[more]
A0A5A7TF76	3.6e-98	92.00	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CGR5	3.6e-98	92.00	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103500709 PE=4 SV=1	[more]
A0A1S3CGS4	5.3e-65	71.59	protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1	[more]
A0A0A0LY09	4.5e-64	64.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132760 PE=4 SV=1	[more]

BLAST of Chy12G213560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648454.1	4.16e-135	97.50	uncharacterized protein LOC105434469 [Cucumis sativus] >KGN64867.1 hypothetical ...	[more]
XP_008462337.1	8.64e-128	92.00	PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >KAA0040676.1 NDR1/HIN1-like...	[more]
XP_038895359.1	1.75e-86	69.35	NDR1/HIN1-like protein 10 [Benincasa hispida]	[more]
XP_038895526.1	5.42e-86	68.39	NDR1/HIN1-like protein 26 isoform X1 [Benincasa hispida]	[more]
XP_008462348.1	1.04e-84	71.59	PREDICTED: protein YLS9-like [Cucumis melo]	[more]

BLAST of Chy12G213560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22870.1	4.8e-10	25.67	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G08160.1	9.1e-09	29.28	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35980.1	3.2e-06	28.83	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G01410.1	1.2e-05	30.00	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11660.1	4.7e-05	25.62	NDR1/HIN1-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 87..142 e-value: 7.1E-6 score: 26.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 25..196
None	No IPR available	PANTHER	PTHR31852:SF1	NDR1/HIN1-LIKE PROTEIN 6	coord: 25..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G213560.1	Chy12G213560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane