Chy12G213250 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G213250
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Ecdysone receptor
Location	chrH12: 10859466 .. 10860204 (+)
RNA-Seq Expression	Chy12G213250
Synteny	Chy12G213250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCTCTGCAGATCTCAGAAACTGTATTTCAGAACTTCAATTGGCCTTTTCCCCATCTCCAAAATTGATTACACCACAAAAACTCTAATAATCTCCAATTTTCTTTCTTCTTCACACCATTTTGTTTCCCCTTCCCTTTTATCCTCAGGGCTTCCTTCACCACCACACCTTATCAACTCACTCCTCCTCTTCAACTGCTCTAACCCAACAAAACCTATCACTGAATCTGCCCAAAACTGCCCAAAATTTGAAGCTCTACAAAACCAAGATGAAGAACAAACATCCCAAAAATTTTCTTGTTTGATCTTTGAGGATCTTGGAAAGCTTCAGGAGAGCTTCCATCCAATTGACTTGAAATGCTCCCATTTCAGAAGGGTTTACAGAAACTCCTCAGATGTTGAACTTAAAAATGGATACAAATTGGGAACTTCAATCTCCTTTGACATTCCTGATCATGTCCCTAATCTGTGTCATGAGTGTGAGAAGCCTGATGGGCATTGTGGAGTGGGTTTGAGATGCATATGCCATGTTCTTGATTGCAGTATGTTTCTGATTCTTCAATCTTACAAAGTTAATATTTGGTTTTTTATATTTGATTCAAGATTCATGATATTTACTACTTCTTCTATGATTTTCAGAAGATAAGGTGTTTTCTAAGGGTGGAATTGTCAGACCTGGTGGTAAATTTCTCATTTCTTTGCTGGCTGTTTTTGTGGTGATCATTGTTTCTATGTAA

mRNA sequence

ATGATTCTCTGCAGATCTCAGAAACTGTATTTCAGAACTTCAATTGGCCTTTTCCCCATCTCCAAAATTGATTACACCACAAAAACTCTAATAATCTCCAATTTTCTTTCTTCTTCACACCATTTTGTTTCCCCTTCCCTTTTATCCTCAGGGCTTCCTTCACCACCACACCTTATCAACTCACTCCTCCTCTTCAACTGCTCTAACCCAACAAAACCTATCACTGAATCTGCCCAAAACTGCCCAAAATTTGAAGCTCTACAAAACCAAGATGAAGAACAAACATCCCAAAAATTTTCTTGTTTGATCTTTGAGGATCTTGGAAAGCTTCAGGAGAGCTTCCATCCAATTGACTTGAAATGCTCCCATTTCAGAAGGGTTTACAGAAACTCCTCAGATGTTGAACTTAAAAATGGATACAAATTGGGAACTTCAATCTCCTTTGACATTCCTGATCATGTCCCTAATCTGTGTCATGAGTGTGAGAAGCCTGATGGGCATTGTGGAGTGGGTTTGAGATGCATATGCCATGTTCTTGATTGCAAAGATAAGGTGTTTTCTAAGGGTGGAATTGTCAGACCTGGTGGTAAATTTCTCATTTCTTTGCTGGCTGTTTTTGTGGTGATCATTGTTTCTATGTAA

Coding sequence (CDS)

ATGATTCTCTGCAGATCTCAGAAACTGTATTTCAGAACTTCAATTGGCCTTTTCCCCATCTCCAAAATTGATTACACCACAAAAACTCTAATAATCTCCAATTTTCTTTCTTCTTCACACCATTTTGTTTCCCCTTCCCTTTTATCCTCAGGGCTTCCTTCACCACCACACCTTATCAACTCACTCCTCCTCTTCAACTGCTCTAACCCAACAAAACCTATCACTGAATCTGCCCAAAACTGCCCAAAATTTGAAGCTCTACAAAACCAAGATGAAGAACAAACATCCCAAAAATTTTCTTGTTTGATCTTTGAGGATCTTGGAAAGCTTCAGGAGAGCTTCCATCCAATTGACTTGAAATGCTCCCATTTCAGAAGGGTTTACAGAAACTCCTCAGATGTTGAACTTAAAAATGGATACAAATTGGGAACTTCAATCTCCTTTGACATTCCTGATCATGTCCCTAATCTGTGTCATGAGTGTGAGAAGCCTGATGGGCATTGTGGAGTGGGTTTGAGATGCATATGCCATGTTCTTGATTGCAAAGATAAGGTGTTTTCTAAGGGTGGAATTGTCAGACCTGGTGGTAAATTTCTCATTTCTTTGCTGGCTGTTTTTGTGGTGATCATTGTTTCTATGTAA

Protein sequence

MILCRSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLINSLLLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKFSCLIFEDLGKLQESFHPIDLKCSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLDCKDKVFSKGGIVRPGGKFLISLLAVFVVIIVSM*

Homology

[Close]

BLAST of Chy12G213250 vs. ExPASy TrEMBL
Match: A0A1S3CG71 (uncharacterized protein LOC103500362 OS=Cucumis melo OX=3656 GN=LOC103500362 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.6e-112
Identity = 202/213 (94.84%), Postives = 206/213 (96.71%), Query Frame = 0


Query: 1   MILCRSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLIN 60
           MILCRSQKLYFRTSIG+FPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLIN
Sbjct: 57  MILCRSQKLYFRTSIGVFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLIN 116

Query: 61  SLLLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKFSCLIFEDLGKLQESFHPIDLK 120
           SLLLFNCSNPTKPITESA NCPK  ALQNQDEEQ SQK SCLIFEDLGKLQESFHP DLK
Sbjct: 117 SLLLFNCSNPTKPITESAHNCPKIVALQNQDEEQISQKVSCLIFEDLGKLQESFHPNDLK 176

Query: 121 CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLD 180
           CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVL+
Sbjct: 177 CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLE 236

Query: 181 CKDKVFSKGGIVRPGGKFLISLLAVFVVIIVSM 214
           CKDKVFSKGGIVRPGGK LISL+AVFVVII+SM
Sbjct: 237 CKDKVFSKGGIVRPGGKILISLMAVFVVIIISM 269

[Close]

BLAST of Chy12G213250 vs. ExPASy TrEMBL
Match: A0A6J1I584 (uncharacterized protein LOC111469332 OS=Cucurbita maxima OX=3661 GN=LOC111469332 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.7e-91
Identity = 172/210 (81.90%), Postives = 190/210 (90.48%), Query Frame = 0


Query: 1   MILCRSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLIN 60
           MILCRSQKLYFRTSIGLFPIS+IDYTTKTLIIS+  SSS HFVSP+LLSSGLPSPP+LIN
Sbjct: 49  MILCRSQKLYFRTSIGLFPISQIDYTTKTLIISHVTSSSTHFVSPALLSSGLPSPPNLIN 108

Query: 61  SLLLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKFSCLIFEDLGKLQESFHPIDLK 120
           SLLLF+CSNPTKPI   +QNCPKFEALQNQ  EQ SQK SCLI EDLG L++SFHP DLK
Sbjct: 109 SLLLFHCSNPTKPI---SQNCPKFEALQNQ--EQESQKPSCLILEDLGDLKQSFHPNDLK 168

Query: 121 CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLD 180
           CS+F RV+RNSSD  L+NGYKLGTSISFDIPDH+PN C ECEK DGHCGVGLRC+CHV++
Sbjct: 169 CSNFIRVHRNSSDFGLRNGYKLGTSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVE 228

Query: 181 CKDKVFSKGGIVRPGGKFLISLLAVFVVII 211
           CKDKVFS+GGIVRPGGKFL+S LAVFV+II
Sbjct: 229 CKDKVFSEGGIVRPGGKFLLSYLAVFVMII 253

[Close]

BLAST of Chy12G213250 vs. ExPASy TrEMBL
Match: A0A6J1EVX8 (uncharacterized protein LOC111436512 OS=Cucurbita moschata OX=3662 GN=LOC111436512 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 8.1e-88
Identity = 168/211 (79.62%), Postives = 186/211 (88.15%), Query Frame = 0


Query: 1   MILCRSQKLYFRTSIGLFPISKIDYTTKTLIISNF-LSSSHHFVSPSLLSSGLPSPPHLI 60
           MILCRS KLYFRTSIGLFPIS+IDYTTKTLIIS+   SSS HFVSP+LLSSGLPSPP+L 
Sbjct: 49  MILCRSHKLYFRTSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLT 108

Query: 61  NSLLLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKFSCLIFEDLGKLQESFHPIDL 120
           NSLLLF+CSNPTKPI+ES QNCPKFEAL+       SQK SCLI EDLG L++SF+P DL
Sbjct: 109 NSLLLFHCSNPTKPISESFQNCPKFEALRE------SQKPSCLILEDLGDLKQSFNPNDL 168

Query: 121 KCSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVL 180
           KCS+F RVYRNSSD  L+NGYKLGTSISFDIPDHVPN C ECEK DGHCGVGLRC+CHV+
Sbjct: 169 KCSNFIRVYRNSSDFGLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVV 228

Query: 181 DCKDKVFSKGGIVRPGGKFLISLLAVFVVII 211
           +CKDKVFS+GGIVRPGGKFL+SLL VFV+II
Sbjct: 229 ECKDKVFSEGGIVRPGGKFLLSLLPVFVMII 253

[Close]

BLAST of Chy12G213250 vs. ExPASy TrEMBL
Match: A0A5A7TC69 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold708G00470 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 6.4e-85
Identity = 154/165 (93.33%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 49  SSGLPSPPHLINSLLLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKFSCLIFEDLG 108
           S GLPSPPHLINSLLLFNCSNPTKPITESA NCPK  ALQNQDEEQ SQK SCLIFEDLG
Sbjct: 32  SCGLPSPPHLINSLLLFNCSNPTKPITESAHNCPKIVALQNQDEEQISQKVSCLIFEDLG 91

Query: 109 KLQESFHPIDLKCSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHC 168
           KLQESFHP DLKCSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHC
Sbjct: 92  KLQESFHPNDLKCSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHC 151

Query: 169 GVGLRCICHVLDCKDKVFSKGGIVRPGGKFLISLLAVFVVIIVSM 214
           GVGLRCICHVL+CKDKVFSKGGIVRPGGK LISL+AVFVVII+SM
Sbjct: 152 GVGLRCICHVLECKDKVFSKGGIVRPGGKILISLMAVFVVIIISM 196

[Close]

BLAST of Chy12G213250 vs. ExPASy TrEMBL
Match: A0A6J1DHE8 (uncharacterized protein LOC111020512 OS=Momordica charantia OX=3673 GN=LOC111020512 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 8.7e-82
Identity = 160/217 (73.73%), Postives = 176/217 (81.11%), Query Frame = 0


Query: 1   MILCRSQKLYFRTSIGLFPISKIDYTTKTLIISNF----LSSSHHFVSPSLLSSGLPSPP 60
           MILCRSQKLYFRTSIGLFPIS IDY+T+TLIIS F     SSS HFVSPSLLSSGLPSPP
Sbjct: 52  MILCRSQKLYFRTSIGLFPISSIDYSTRTLIISQFPSSYSSSSTHFVSPSLLSSGLPSPP 111

Query: 61  HLINSLLLFNCSNPTKPITESAQNC---PKFEALQNQDEEQTSQKFSCLIFEDLGKLQES 120
            L NSLLLF+CSNPTKPI+ESA+ C   P F A         S K SCLI +DL  L  S
Sbjct: 112 DLTNSLLLFHCSNPTKPISESAKTCTHLPNFGA---------SPKTSCLILDDLRNLNHS 171

Query: 121 FHPIDLKCSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHCGVGLR 180
           FHP D+ CSH+ RVYRNSSD EL+NGYKLGT+ISFDIPDHVPNLC+EC KP GHCGVGLR
Sbjct: 172 FHPNDMNCSHYTRVYRNSSDFELRNGYKLGTTISFDIPDHVPNLCNECGKPGGHCGVGLR 231

Query: 181 CICHVLDCKDKVFSKGGIVRPGGKFLISLLAVFVVII 211
           CICHVL+CKDKVFS+GGIV PGGKFL+ LLAV V+I+
Sbjct: 232 CICHVLECKDKVFSEGGIVSPGGKFLLYLLAVLVMIM 259

[Close]

BLAST of Chy12G213250 vs. NCBI nr
Match: KAE8652799.1 (hypothetical protein Csa_022847 [Cucumis sativus])

HSP 1 Score: 423 bits (1088), Expect = 1.94e-148
Identity = 207/213 (97.18%), Postives = 209/213 (98.12%), Query Frame = 0


Query: 1   MILCRSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLIN 60
           +ILCRSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLIN
Sbjct: 57  VILCRSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLIN 116

Query: 61  SLLLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKFSCLIFEDLGKLQESFHPIDLK 120
           SLLLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQK SCLIFEDLGKLQESFHP DLK
Sbjct: 117 SLLLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLK 176

Query: 121 CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLD 180
           CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPN CHECEKPDGHCGVGLRCICHVLD
Sbjct: 177 CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLD 236

Query: 181 CKDKVFSKGGIVRPGGKFLISLLAVFVVIIVSM 213
           CKDKVFSKGGIVRP GKFLISLLAVFVVII+SM
Sbjct: 237 CKDKVFSKGGIVRPCGKFLISLLAVFVVIIISM 269

[Close]

BLAST of Chy12G213250 vs. NCBI nr
Match: XP_008461870.1 (PREDICTED: uncharacterized protein LOC103500362 [Cucumis melo])

HSP 1 Score: 416 bits (1070), Expect = 1.07e-145
Identity = 202/213 (94.84%), Postives = 206/213 (96.71%), Query Frame = 0


Query: 1   MILCRSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLIN 60
           MILCRSQKLYFRTSIG+FPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLIN
Sbjct: 57  MILCRSQKLYFRTSIGVFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLIN 116

Query: 61  SLLLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKFSCLIFEDLGKLQESFHPIDLK 120
           SLLLFNCSNPTKPITESA NCPK  ALQNQDEEQ SQK SCLIFEDLGKLQESFHP DLK
Sbjct: 117 SLLLFNCSNPTKPITESAHNCPKIVALQNQDEEQISQKVSCLIFEDLGKLQESFHPNDLK 176

Query: 121 CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLD 180
           CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVL+
Sbjct: 177 CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLE 236

Query: 181 CKDKVFSKGGIVRPGGKFLISLLAVFVVIIVSM 213
           CKDKVFSKGGIVRPGGK LISL+AVFVVII+SM
Sbjct: 237 CKDKVFSKGGIVRPGGKILISLMAVFVVIIISM 269

[Close]

BLAST of Chy12G213250 vs. NCBI nr
Match: XP_031736033.1 (uncharacterized protein LOC101222629 isoform X1 [Cucumis sativus])

HSP 1 Score: 397 bits (1020), Expect = 5.70e-138
Identity = 191/196 (97.45%), Postives = 192/196 (97.96%), Query Frame = 0


Query: 1   MILCRSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLIN 60
           +ILCRSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLIN
Sbjct: 57  VILCRSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLIN 116

Query: 61  SLLLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKFSCLIFEDLGKLQESFHPIDLK 120
           SLLLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQK SCLIFEDLGKLQESFHP DLK
Sbjct: 117 SLLLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLK 176

Query: 121 CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLD 180
           CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPN CHECEKPDGHCGVGLRCICHVLD
Sbjct: 177 CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLD 236

Query: 181 CKDKVFSKGGIVRPGG 196
           CKDKVFSKGGIVRP G
Sbjct: 237 CKDKVFSKGGIVRPCG 252

[Close]

BLAST of Chy12G213250 vs. NCBI nr
Match: XP_004139471.1 (uncharacterized protein LOC101222629 isoform X2 [Cucumis sativus])

HSP 1 Score: 396 bits (1017), Expect = 7.22e-138
Identity = 190/194 (97.94%), Postives = 191/194 (98.45%), Query Frame = 0


Query: 1   MILCRSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLIN 60
           +ILCRSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLIN
Sbjct: 57  VILCRSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLIN 116

Query: 61  SLLLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKFSCLIFEDLGKLQESFHPIDLK 120
           SLLLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQK SCLIFEDLGKLQESFHP DLK
Sbjct: 117 SLLLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLK 176

Query: 121 CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLD 180
           CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPN CHECEKPDGHCGVGLRCICHVLD
Sbjct: 177 CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLD 236

Query: 181 CKDKVFSKGGIVRP 194
           CKDKVFSKGGIVRP
Sbjct: 237 CKDKVFSKGGIVRP 250

[Close]

BLAST of Chy12G213250 vs. NCBI nr
Match: XP_038893879.1 (uncharacterized protein LOC120082681 [Benincasa hispida])

HSP 1 Score: 372 bits (954), Expect = 5.01e-128
Identity = 181/213 (84.98%), Postives = 196/213 (92.02%), Query Frame = 0


Query: 1   MILCRSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLIN 60
           MILCRSQKL+FRTSIGLFPISKIDYTTKTLIIS+F SS  HFVSPSLL SGLPSPP LIN
Sbjct: 57  MILCRSQKLFFRTSIGLFPISKIDYTTKTLIISHFHSSLDHFVSPSLLFSGLPSPPDLIN 116

Query: 61  SLLLFNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKFSCLIFEDLGKLQESFHPIDLK 120
           SLLLFNCSNPTKPI+ES QNCPKFEALQ QDE++ SQ+ SCLIFEDLGKL+ESFHP DL 
Sbjct: 117 SLLLFNCSNPTKPISESVQNCPKFEALQKQDEKEMSQRTSCLIFEDLGKLKESFHPNDLN 176

Query: 121 CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLD 180
           CSHFRRVYRNSSD +LKN YKLGTSISFDIPDHVPNLC+EC+KPDGHCGVGLRCICHVL+
Sbjct: 177 CSHFRRVYRNSSDFDLKNVYKLGTSISFDIPDHVPNLCNECQKPDGHCGVGLRCICHVLE 236

Query: 181 CKDKVFSKGGIVRPGGKFLISLLAVFVVIIVSM 213
           CKDKVFS+GGIVRPGG  L SLLAV+V+II+ M
Sbjct: 237 CKDKVFSEGGIVRPGGICLFSLLAVYVMIILFM 269

[Close]

BLAST of Chy12G213250 vs. TAIR 10
Match: AT3G44716.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 2.1e-11
Identity = 24/49 (48.98%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 141 KLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLDCKDKVFSKG 190
           KL   +S ++  H+P+LC  CE+P G+CGV LRC+CH  +CK+KV + G
Sbjct: 70  KLRARVSMEVEGHIPDLCIACERPKGNCGVALRCLCHPKECKNKVINFG 118

[Close]

BLAST of Chy12G213250 vs. TAIR 10
Match: AT3G44716.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 13 Blast hits to 13 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.6 bits (161), Expect = 2.7e-11
Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = 0


Query: 141 KLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLDCKDKVFSKGGIVRP-GGKF- 200
           KL   +S ++  H+P+LC  CE+P G+CGV LRC+CH  +CK+KV + G   R   G   
Sbjct: 70  KLRARVSMEVEGHIPDLCIACERPKGNCGVALRCLCHPKECKNKVINFGTKSRALSGNLQ 129

Query: 201 ----LISLLAVFVV 209
               L+ LLA+F++
Sbjct: 130 QLLPLLLLLAMFLI 143

The following BLAST results are available for this feature:

BLAST of Chy12G213250 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G213250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CG71	1.6e-112	94.84	uncharacterized protein LOC103500362 OS=Cucumis melo OX=3656 GN=LOC103500362 PE=...	[more]
A0A6J1I584	2.7e-91	81.90	uncharacterized protein LOC111469332 OS=Cucurbita maxima OX=3661 GN=LOC111469332...	[more]
A0A6J1EVX8	8.1e-88	79.62	uncharacterized protein LOC111436512 OS=Cucurbita moschata OX=3662 GN=LOC1114365...	[more]
A0A5A7TC69	6.4e-85	93.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1DHE8	8.7e-82	73.73	uncharacterized protein LOC111020512 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of Chy12G213250 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652799.1	1.94e-148	97.18	hypothetical protein Csa_022847 [Cucumis sativus]	[more]
XP_008461870.1	1.07e-145	94.84	PREDICTED: uncharacterized protein LOC103500362 [Cucumis melo]	[more]
XP_031736033.1	5.70e-138	97.45	uncharacterized protein LOC101222629 isoform X1 [Cucumis sativus]	[more]
XP_004139471.1	7.22e-138	97.94	uncharacterized protein LOC101222629 isoform X2 [Cucumis sativus]	[more]
XP_038893879.1	5.01e-128	84.98	uncharacterized protein LOC120082681 [Benincasa hispida]	[more]

BLAST of Chy12G213250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44716.2	2.1e-11	48.98	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G44716.1	2.7e-11	41.89	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33355	WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED	coord: 1..210
None	No IPR available	PANTHER	PTHR33355:SF11	PROTEIN, PUTATIVE-RELATED	coord: 1..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G213250.1	Chy12G213250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane