Chy12G212960 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G212960
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Ribosomal protein
Location	chrH12: 10179726 .. 10182320 (-)
RNA-Seq Expression	Chy12G212960
Synteny	Chy12G212960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTATTTTTGTCAGCATTCTCTTTGTTTTTCATAATTGTTTTGGTTTCCGATTCATGTTAGCTTTTAGGTTTAACTAGTTACGATTTTTGCACTCTCTTAGTTTCTTTTATTCGATTTTACTGTTTTTTGAGTTTTATGGTTGCTATGATAATGGGTTCTGTATAATTTAATCTAATGTTTGAGTAATGTGAACTTTTGTAAGTGGATGGATGATCTTTTGGAAGTAGGCCTCTTTTCTTTGATTCTATTGTTTTGAGTTTTATGGTTGCTAGAATAGTGGGTTGGTTCTGAATAATCTAATCTAGTATTCGAGTAATGTGAAGTTTTAAGACAGTGGATTGATGATTTTGGAAAGTAGGCTTCTTTTCTTCAATTCTACTGTTTTGAGTCTTATGGTTGCTAAGATAATGGATTCTGTATAATTTAATCTAATGTTCGAGTAATGTGAACCTTTGAGAAAGTGGATTGATAATCTTTTGGAAGTAGGCTTCTTTTATTTGATTCCACTGTTGTGAGTTTTATGGTTGCTAGAACAATGGGTTCTTAATGATTTTATCTAATGTTGGAGTAATGTGAACTTTTGATAGAGTGTATCGATAATCTTTAGGAAGTAGGCTTGTATTCCTTTGATTCTTCATGAAGTTTCAGCATGTGATCGTTTCAGTTATACCCCGTGTTTTAAAAAGTTGTCTGAGGCTCAAGGCTTAGGTTTGGTGAAAATCATTGTGCCTTTTGGCTCGAAGACCTGTGTCTTGGAGCTTTTTCTTTATTTTTAAGAAATGGTAATTATTAGAAGTCTTTTCTTTTTTCATTTTCATTTTGTTTTCATATTTCCACTTCAACTATGCTTCCTCTCCTTAATAAAGTACTTTGATCTAAAGTGCACCTCATGAAAACTCTTTTTGCGCTTTGTGCGTAAGCCTAAGATTATTGTGCTTTATTGGGGCCATACCTTGTGTGTAATACTATCTTTTGATATCTCTAAACAGTAAGCTTCAGAGTGATGCATTGAGAGAAGCAATCTCATCTATCTTCACTGATAGCAATGAGAAAAAGAGGAAGTTTACTGAGACCATTGAGCTTCAGATCGGGCTGAAGAACTATGATCCTCAAAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCACACATTCCCCGTCCCAAGATGAAGATATGCATGCTTGGGGATGCCTCACACATTGAAGAGGTAATATTACATAGCTCTAGGCACATGATCATGTTACTGCTGACTCTTAGTTATTTTGCTTCCTATATCTTCACTTTGCTTATTTTAAGCTATAGAAATTTATTTTATTATGCTCAATATTTCTAAACTACATTTGTTTTCTTATAGCCAAATCTATTGTTGGATTCTAATTATAATTTAAGAAGCACTGAGACTTTAGTTTGACTAGTGTGTACGTGTCCAACACGTTCTGGACACTGACACTTGGTGGAGACCTATCGAACACATGTTAGTGTAACAAATGCATTAGACATGCATAGAACACTCGTTGAGTGGACTATAAAGACACATATATGACAATAATAATAACTTTTAAATGAGGGATACATGAAGCTAAGTCTTTTAAGCATATAAATGCTTCAATTCATTTACTATGAATTTTATTTTACTATAAAAATGATATATAGTTTTTAAAAATGAATATTTAAAAAATGTATCCTTGCTTTGTCATGTTCTAGAATTTTAGAACATGGCATGTCGCTGTTTCCGTGTCATGTCGTATCCGTGTTCCTACTTCTTAGAATATAACCTCTCTGTTTTTAAATTCCTACAGTTTAAGGATATGTTGTGGTGTTTATAAGCTACATATTAATGTTTCTGATGATTGTTTTGGAGATGGACGATTGGATATGCCTTTTTTTTATTTGTTACTTGCGCTTTTGGGAGCTCGGACGATGTGCTAATGGGGTTTCATGAAAGTAAATTTCAGGCTGAGAAGATTGGTCTAGAATATATGGATGTGGAAGGCTTGAAGAAGCTTAATAAGAACAAGAAATTGGTGAAGAAACTTGCCAAAAAATACCATGCCTTTTTGGCATCAGAATCTATAATCAAGCAGATTCCTCGTCTTCTAGGCCCCGGTCTCAACAAAGCAGGTTAGAATATTTGATGGAGATTTTCTGTTTTCTTCACCAAATATGATCAACTGATTAACTCCCTGGCAAATTGATCCTTGCTATGTTCAACTTTGATCCTATCTTTGGTGTTTTTATTTCAGGAAAGTTTCCAACATTGGTGACACATCAAGAAACGCTTGAATCTAAAGTTAATGAGACCAAGGCGATGGTCAAGTTTCAACTGAAGAAGGTTCTTTGTATGGGAGTTGCTGTTGGAAACGTTTCAATGGATGAGAAGCAAGTCTTCCAAAATGTTCAAATGAGCGTCAATTTCCTGGTTTCTTTGTTGAAAAAGAACTGGCAGAATGTAAGTTTGTCTATGTGTATCTCCTAACTCAACTCCATCTGTTTCATCATTTTGCTTATGGAGATGTGAATATGGTTTCTTGCAGGTTAGGTGCCTGTACCTGAAGAGCACAATGGGGAAGTCGTATCGAGTTTTCTAA

mRNA sequence

ATGAGTAAGCTTCAGAGTGATGCATTGAGAGAAGCAATCTCATCTATCTTCACTGATAGCAATGAGAAAAAGAGGAAGTTTACTGAGACCATTGAGCTTCAGATCGGGCTGAAGAACTATGATCCTCAAAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCACACATTCCCCGTCCCAAGATGAAGATATGCATGCTTGGGGATGCCTCACACATTGAAGAGGCTGAGAAGATTGGTCTAGAATATATGGATGTGGAAGGCTTGAAGAAGCTTAATAAGAACAAGAAATTGGTGAAGAAACTTGCCAAAAAATACCATGCCTTTTTGGCATCAGAATCTATAATCAAGCAGATTCCTCGTCTTCTAGGCCCCGGTCTCAACAAAGCAGGAAAGTTTCCAACATTGGTGACACATCAAGAAACGCTTGAATCTAAAGTTAATGAGACCAAGGCGATGGTCAAGTTTCAACTGAAGAAGGTTCTTTGTATGGGAGTTGCTGTTGGAAACGTTTCAATGGATGAGAAGCAAGTCTTCCAAAATGTTCAAATGAGCGTCAATTTCCTGGTTTCTTTGTTGAAAAAGAACTGGCAGAATGTTAGGTGCCTGTACCTGAAGAGCACAATGGGGAAGTCGTATCGAGTTTTCTAA

Coding sequence (CDS)

ATGAGTAAGCTTCAGAGTGATGCATTGAGAGAAGCAATCTCATCTATCTTCACTGATAGCAATGAGAAAAAGAGGAAGTTTACTGAGACCATTGAGCTTCAGATCGGGCTGAAGAACTATGATCCTCAAAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCACACATTCCCCGTCCCAAGATGAAGATATGCATGCTTGGGGATGCCTCACACATTGAAGAGGCTGAGAAGATTGGTCTAGAATATATGGATGTGGAAGGCTTGAAGAAGCTTAATAAGAACAAGAAATTGGTGAAGAAACTTGCCAAAAAATACCATGCCTTTTTGGCATCAGAATCTATAATCAAGCAGATTCCTCGTCTTCTAGGCCCCGGTCTCAACAAAGCAGGAAAGTTTCCAACATTGGTGACACATCAAGAAACGCTTGAATCTAAAGTTAATGAGACCAAGGCGATGGTCAAGTTTCAACTGAAGAAGGTTCTTTGTATGGGAGTTGCTGTTGGAAACGTTTCAATGGATGAGAAGCAAGTCTTCCAAAATGTTCAAATGAGCGTCAATTTCCTGGTTTCTTTGTTGAAAAAGAACTGGCAGAATGTTAGGTGCCTGTACCTGAAGAGCACAATGGGGAAGTCGTATCGAGTTTTCTAA

Protein sequence

MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF*

Homology

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BLAST of Chy12G212960 vs. ExPASy Swiss-Prot
Match: B8B9K6 (60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 6.0e-104
Identity = 188/216 (87.04%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ L+EAIS +  +S EK RKFTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMK+CMLGDA H+EEAEKIGL+YMDVE LKK+NKNKKLVKKLAKKYHAFLASE+IIKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKA VKFQLKKVLCMGVAVGN+SM+EKQ+ Q
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           N+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 181 NIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

[Close]

BLAST of Chy12G212960 vs. ExPASy Swiss-Prot
Match: B7F845 (60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 6.0e-104
Identity = 188/216 (87.04%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ L+EAIS +  +S EK RKFTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMK+CMLGDA H+EEAEKIGL+YMDVE LKK+NKNKKLVKKLAKKYHAFLASE+IIKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKA VKFQLKKVLCMGVAVGN+SM+EKQ+ Q
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           N+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 181 NIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

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BLAST of Chy12G212960 vs. ExPASy Swiss-Prot
Match: P59231 (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.1e-102
Identity = 192/217 (88.48%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQS+A+REAISSI T   E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQI 120
           PKMKICMLGDA H+EEAEKIGLE MDVE LKKLNKNKKLVKKLAKK+HAFLASES+IKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN+SM+EKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

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BLAST of Chy12G212960 vs. ExPASy Swiss-Prot
Match: Q8VZB9 (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 1.5e-102
Identity = 189/216 (87.50%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI++I   S  KKR F ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDA H+EEAEK+GLE MDVE LKKLNKNKKLVKKLAKKYHAFLASES+IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN+SM+EKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Chy12G212960 vs. ExPASy Swiss-Prot
Match: P59230 (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 2.8e-101
Identity = 186/216 (86.11%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI++I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDA H+EEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASES+IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQE+LE+KVNETKA VKFQLKKVLCMGVAVGN+SM+EKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Chy12G212960 vs. ExPASy TrEMBL
Match: A0A0A0LVE6 (Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_1G163140 PE=3 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 3.0e-114
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP
Sbjct: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Chy12G212960 vs. ExPASy TrEMBL
Match: A0A5A7T1H8 (Ribosomal protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003490 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.5e-113
Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP
Sbjct: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQETLESKVNETKA VKFQLKKVLCMGVAVGNVSMDEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKATVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Chy12G212960 vs. ExPASy TrEMBL
Match: A0A1S3CEF7 (Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103500042 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.5e-113
Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP
Sbjct: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQETLESKVNETKA VKFQLKKVLCMGVAVGNVSMDEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKATVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Chy12G212960 vs. ExPASy TrEMBL
Match: A0A6J1CLJ2 (Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111012713 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 6.9e-111
Identity = 207/216 (95.83%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAI+SIF+DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAITSIFSDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDA H+EEAEKIGL+YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNVSM+EKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Chy12G212960 vs. ExPASy TrEMBL
Match: A0A6J1HYM1 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111469275 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 6.9e-111
Identity = 207/216 (95.83%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDA H+EEAEKIGL+YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNV+M+EKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Chy12G212960 vs. NCBI nr
Match: XP_031736233.1 (60S ribosomal protein L10a [Cucumis sativus] >KGN64929.1 hypothetical protein Csa_022884 [Cucumis sativus])

HSP 1 Score: 421 bits (1081), Expect = 3.81e-148
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP
Sbjct: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Chy12G212960 vs. NCBI nr
Match: XP_008461453.1 (PREDICTED: 60S ribosomal protein L10a [Cucumis melo] >KAA0035447.1 60S ribosomal protein L10a [Cucumis melo var. makuwa] >TYK31075.1 60S ribosomal protein L10a [Cucumis melo var. makuwa])

HSP 1 Score: 418 bits (1075), Expect = 3.13e-147
Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP
Sbjct: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQETLESKVNETKA VKFQLKKVLCMGVAVGNVSMDEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKATVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Chy12G212960 vs. NCBI nr
Match: XP_038893874.1 (60S ribosomal protein L10a [Benincasa hispida] >XP_038893875.1 60S ribosomal protein L10a [Benincasa hispida])

HSP 1 Score: 413 bits (1062), Expect = 3.00e-145
Identity = 209/216 (96.76%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDASH+EEAEKIGL+YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE+IIKQIP
Sbjct: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGN++M+EKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216
           NVQMSVNFLVSLLKKNWQNVRCLYLKS+MGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSSMGKSYRVF 216

[Close]

BLAST of Chy12G212960 vs. NCBI nr
Match: XP_022932197.1 (60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022970262.1 60S ribosomal protein L10a-like [Cucurbita maxima] >XP_023520953.1 60S ribosomal protein L10a-like [Cucurbita pepo subsp. pepo] >KAG6583662.1 60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019322.1 60S ribosomal protein L10a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 409 bits (1052), Expect = 1.00e-143
Identity = 207/216 (95.83%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDA H+EEAEKIGL+YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNV+M+EKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Chy12G212960 vs. NCBI nr
Match: XP_022142655.1 (60S ribosomal protein L10a [Momordica charantia] >XP_022142656.1 60S ribosomal protein L10a [Momordica charantia])

HSP 1 Score: 409 bits (1052), Expect = 1.00e-143
Identity = 207/216 (95.83%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAI+SIF+DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAITSIFSDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDA H+EEAEKIGL+YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNVSM+EKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Chy12G212960 vs. TAIR 10
Match: AT5G22440.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 374.0 bits (959), Expect = 8.1e-104
Identity = 192/217 (88.48%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQS+A+REAISSI T   E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQI 120
           PKMKICMLGDA H+EEAEKIGLE MDVE LKKLNKNKKLVKKLAKK+HAFLASES+IKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN+SM+EKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of Chy12G212960 vs. TAIR 10
Match: AT5G22440.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 374.0 bits (959), Expect = 8.1e-104
Identity = 192/217 (88.48%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQS+A+REAISSI T   E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQI 120
           PKMKICMLGDA H+EEAEKIGLE MDVE LKKLNKNKKLVKKLAKK+HAFLASES+IKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN+SM+EKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of Chy12G212960 vs. TAIR 10
Match: AT1G08360.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 373.6 bits (958), Expect = 1.1e-103
Identity = 189/216 (87.50%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI++I   S  KKR F ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDA H+EEAEK+GLE MDVE LKKLNKNKKLVKKLAKKYHAFLASES+IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN+SM+EKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Chy12G212960 vs. TAIR 10
Match: AT2G27530.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 369.4 bits (947), Expect = 2.0e-102
Identity = 186/216 (86.11%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI++I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDA H+EEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASES+IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQE+LE+KVNETKA VKFQLKKVLCMGVAVGN+SM+EKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Chy12G212960 vs. TAIR 10
Match: AT2G27530.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 369.4 bits (947), Expect = 2.0e-102
Identity = 186/216 (86.11%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI++I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120
           KMKICMLGDA H+EEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASES+IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQE+LE+KVNETKA VKFQLKKVLCMGVAVGN+SM+EKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

The following BLAST results are available for this feature:

BLAST of Chy12G212960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8B9K6	6.0e-104	87.04	60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3...	[more]
B7F845	6.0e-104	87.04	60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE...	[more]
P59231	1.1e-102	88.48	60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=...	[more]
Q8VZB9	1.5e-102	87.50	60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=...	[more]
P59230	2.8e-101	86.11	60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=...	[more]

BLAST of Chy12G212960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVE6	3.0e-114	100.00	Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_1G163140 PE=3 SV=1	[more]
A0A5A7T1H8	1.5e-113	99.54	Ribosomal protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00...	[more]
A0A1S3CEF7	1.5e-113	99.54	Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103500042 PE=3 SV=1	[more]
A0A6J1CLJ2	6.9e-111	95.83	Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111012713 PE=3 SV=1	[more]
A0A6J1HYM1	6.9e-111	95.83	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111469275 PE=3 SV=1	[more]

BLAST of Chy12G212960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031736233.1	3.81e-148	100.00	60S ribosomal protein L10a [Cucumis sativus] >KGN64929.1 hypothetical protein Cs...	[more]
XP_008461453.1	3.13e-147	99.54	PREDICTED: 60S ribosomal protein L10a [Cucumis melo] >KAA0035447.1 60S ribosomal...	[more]
XP_038893874.1	3.00e-145	96.76	60S ribosomal protein L10a [Benincasa hispida] >XP_038893875.1 60S ribosomal pro...	[more]
XP_022932197.1	1.00e-143	95.83	60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022970262.1 60S ribosom...	[more]
XP_022142655.1	1.00e-143	95.83	60S ribosomal protein L10a [Momordica charantia] >XP_022142656.1 60S ribosomal p...	[more]

BLAST of Chy12G212960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22440.1	8.1e-104	88.48	Ribosomal protein L1p/L10e family	[more]
AT5G22440.2	8.1e-104	88.48	Ribosomal protein L1p/L10e family	[more]
AT1G08360.1	1.1e-103	87.50	Ribosomal protein L1p/L10e family	[more]
AT2G27530.1	2.0e-102	86.11	Ribosomal protein L1p/L10e family	[more]
AT2G27530.2	2.0e-102	86.11	Ribosomal protein L1p/L10e family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.190.20		coord: 20..211 e-value: 9.6E-62 score: 210.0
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 2..214
None	No IPR available	PANTHER	PTHR23105:SF164	60S RIBOSOMAL PROTEIN L10A-3	coord: 2..214
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	3.40.50.790		coord: 65..154 e-value: 9.6E-62 score: 210.0
IPR002143	Ribosomal protein L1	PIRSF	PIRSF002155	RPL1p_RPL1a_RPL10e_RPL1o	coord: 1..216 e-value: 5.5E-50 score: 167.7
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 23..210 e-value: 1.5E-44 score: 152.2
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 9..215 e-value: 1.83247E-64 score: 196.636
IPR023673	Ribosomal protein L1, conserved site	PROSITE	PS01199	RIBOSOMAL_L1	coord: 116..135
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 21..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G212960.1	Chy12G212960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome