Chy12G212810 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G212810
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Protein of unknown function, DUF584
Location	chrH12: 9888824 .. 9890614 (+)
RNA-Seq Expression	Chy12G212810
Synteny	Chy12G212810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCTCAACCTTCCTTCCTCCCGCTTCCGCCACCGCAATTCCCCTTCCTCCGAACGCTTTCTCGCCTCCTTCCCTTCTCCCCCCGTTCGCACTTCAAACCCTAGTTCCACCACCGCTCTCGACGACGATTCCGAGCTCAACGAAGACGACGTCTTCTGGACCGGCGATTTTGCTTCCGATTCCGTCCACCATAGCCACTCCACTCCTTCTTCCTCTTCCTCTTCCACTCCTCGTCACCATATTCATCACCTCCAGCATCACAAGGGTTTTCCTCTGCCTGAAACCTTCGGAATTCTCGCTGCTCTTCCCGAGAATGAGGCCTCCTCCAGTCTTAGAAACTCTTCTCATTTCTATCACAAGGCCTCTGTTTCGTCTTCTTCCTCCTCCTCCCCTTCGTCTTCTCGTATGATTCCCACGATCCCCAAACCTCCTCTGGACCGATTGCCTCTTCCCATTTCGACCTCGTTGAAGTACCAGTCTGCACCTGTGAATGTGCCAATAATGTCGAAGGCGGTTGTTCAAAGACAGCTGGAGATTGATGTGGACGATGTTGATGAAGACGATGGGGAGATGTTGCCGCCGCATGAGATTGTGGCCAGAAGTTTGGCTCAGTCGCCGATGTTGTCGTGCTCTGTGCTTGAGGGAGCTGGAAGGACGTTAAAAGGGAGGGATCTTCGTCAGGTTCGCAACGCGGTTTGGAGACGAACAGGTTTTCTTGATTAAGGAATTGAATTCCAGTAATTATTTTTGGAGAACAGATTTGCACAATTCGCTAAGCTGCTACTGTCTGATTCACTTTGACCACTTCTTGTGTCGCTCTTTTTAGAAATATATATTGAGGGTCCAGGAATATTTGAATCTGCTTGACACTCATCGTAACGAGGAATTGGAATTGTAATTATCTGAAGGGCGCCTAAGAATTTTCTTTGAAGCTTATTTGTAAGTTTGACTGTTATCTCAAAACGTTTTTCAATCCATCATTATTAAATTCTAGTAATGTTATTAGATTTTCATCTACTATTTCTTTCAGTCAGAAGATTTTTCCTTTCTTTCTTTCTATTTTCTCTTCCATTACAATGGTTCATCCGGAATTGGGGGATTCTACATAACACTATTGGGCGCCAGCCTTGTAAAGATTAAAATTCAGAAAACAGAGTTCCCACTGGAGTGTGTTTGATTTGTTTCATTGTTTTCTTTATCCCCTAATGGAGAGGGGTTTACCATTCTTTTTTTTAGTTGGGAGGACAATTATGCTTAATTAAGTCGTATAAGGTGACATTGAATAATTCATATAATTGATACTGTTTCTTTTTTCTTTACTCATTGAATTAATTAACATCTCACCAGTTGCAAATTTTTCCAAATTTCTTGGACGCGTGAATTTAGAAATGAACTTCATGTTTGATTCATGCAGTTGAAAGTGTTTATTTCTGGTTATTATGGAGCTTTCCCTCTTTTATCACCCCTTTTTACATGAGTGTGATAGTCATGTCTTTCTTTAGAATATTGCAAGTTGTGAATGATTGAATTTGTTATTTATGAGGCCTTCTTGTGACAACTAGAACCTTAACGTGTCTGTTTATTGGGGTTAAATATTAGAGAGCATAGTTATTCGTTTATTGGTGCATTGGGAGGTGTATCTTTTTTTCTTTACTTTACCATTCTCTCTATTCATCAGGTGGTGGGAAGGGGAGCAGGTGGATCAGTGATTCTGATATGGAGGGTCTGTATGGACGAGTGAAAATGGGGAAGGGAGGAATAATTGTAGAGGAGAGTGAAGGAACTTGA

mRNA sequence

ATGGACCTCAACCTTCCTTCCTCCCGCTTCCGCCACCGCAATTCCCCTTCCTCCGAACGCTTTCTCGCCTCCTTCCCTTCTCCCCCCGTTCGCACTTCAAACCCTAGTTCCACCACCGCTCTCGACGACGATTCCGAGCTCAACGAAGACGACGTCTTCTGGACCGGCGATTTTGCTTCCGATTCCGTCCACCATAGCCACTCCACTCCTTCTTCCTCTTCCTCTTCCACTCCTCGTCACCATATTCATCACCTCCAGCATCACAAGGGTTTTCCTCTGCCTGAAACCTTCGGAATTCTCGCTGCTCTTCCCGAGAATGAGGCCTCCTCCAGTCTTAGAAACTCTTCTCATTTCTATCACAAGGCCTCTGTTTCGTCTTCTTCCTCCTCCTCCCCTTCGTCTTCTCGTATGATTCCCACGATCCCCAAACCTCCTCTGGACCGATTGCCTCTTCCCATTTCGACCTCGTTGAAGTACCAGTCTGCACCTGTGAATGTGCCAATAATGTCGAAGGCGGTTGTTCAAAGACAGCTGGAGATTGATGTGGACGATGTTGATGAAGACGATGGGGAGATGTTGCCGCCGCATGAGATTGTGGCCAGAAGTTTGGCTCAGTCGCCGATGTTGTCGTGCTCTGTGCTTGAGGGAGCTGGAAGGACGTTAAAAGGGAGGGATCTTCGTCAGGTTCGCAACGCGGTTTGGAGACGAACAGGTGGTGGGAAGGGGAGCAGGTGGATCAGTGATTCTGATATGGAGGGTCTGTATGGACGAGTGAAAATGGGGAAGGGAGGAATAATTGTAGAGGAGAGTGAAGGAACTTGA

Coding sequence (CDS)

ATGGACCTCAACCTTCCTTCCTCCCGCTTCCGCCACCGCAATTCCCCTTCCTCCGAACGCTTTCTCGCCTCCTTCCCTTCTCCCCCCGTTCGCACTTCAAACCCTAGTTCCACCACCGCTCTCGACGACGATTCCGAGCTCAACGAAGACGACGTCTTCTGGACCGGCGATTTTGCTTCCGATTCCGTCCACCATAGCCACTCCACTCCTTCTTCCTCTTCCTCTTCCACTCCTCGTCACCATATTCATCACCTCCAGCATCACAAGGGTTTTCCTCTGCCTGAAACCTTCGGAATTCTCGCTGCTCTTCCCGAGAATGAGGCCTCCTCCAGTCTTAGAAACTCTTCTCATTTCTATCACAAGGCCTCTGTTTCGTCTTCTTCCTCCTCCTCCCCTTCGTCTTCTCGTATGATTCCCACGATCCCCAAACCTCCTCTGGACCGATTGCCTCTTCCCATTTCGACCTCGTTGAAGTACCAGTCTGCACCTGTGAATGTGCCAATAATGTCGAAGGCGGTTGTTCAAAGACAGCTGGAGATTGATGTGGACGATGTTGATGAAGACGATGGGGAGATGTTGCCGCCGCATGAGATTGTGGCCAGAAGTTTGGCTCAGTCGCCGATGTTGTCGTGCTCTGTGCTTGAGGGAGCTGGAAGGACGTTAAAAGGGAGGGATCTTCGTCAGGTTCGCAACGCGGTTTGGAGACGAACAGGTGGTGGGAAGGGGAGCAGGTGGATCAGTGATTCTGATATGGAGGGTCTGTATGGACGAGTGAAAATGGGGAAGGGAGGAATAATTGTAGAGGAGAGTGAAGGAACTTGA

Protein sequence

MDLNLPSSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDDSELNEDDVFWTGDFASDSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEIDVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGGGKGSRWISDSDMEGLYGRVKMGKGGIIVEESEGT*

Homology

[Close]

BLAST of Chy12G212810 vs. ExPASy TrEMBL
Match: A0A0A0LT40 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G165750 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 3.1e-124
Identity = 236/238 (99.16%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDDSELNEDDVFWTGDFAS 60
           MDLNLPSSRFRHRNSPSSERFLASFPSPPVR+SNPSSTTALDDDSELNEDDVFWTGDFAS
Sbjct: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFAS 60

Query: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120
           DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH
Sbjct: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120

Query: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEI 180
           KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLE+
Sbjct: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV 180

Query: 181 DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 239
           DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG
Sbjct: 181 DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 238

[Close]

BLAST of Chy12G212810 vs. ExPASy TrEMBL
Match: A0A1S4E4F1 (uncharacterized protein LOC103499884 OS=Cucumis melo OX=3656 GN=LOC103499884 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.3e-122
Identity = 235/238 (98.74%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDDSELNEDDVFWTGDFAS 60
           MDLNL SSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDDSELNEDDVFWTGDFAS
Sbjct: 1   MDLNLHSSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDDSELNEDDVFWTGDFAS 60

Query: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120
           DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH
Sbjct: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120

Query: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEI 180
           KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLE+
Sbjct: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV 180

Query: 181 DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 239
           DVD VDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG
Sbjct: 181 DVDYVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 238

[Close]

BLAST of Chy12G212810 vs. ExPASy TrEMBL
Match: A0A5A7SY45 (Senescence regulator OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002880 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.3e-122
Identity = 235/238 (98.74%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDDSELNEDDVFWTGDFAS 60
           MDLNL SSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDDSELNEDDVFWTGDFAS
Sbjct: 1   MDLNLHSSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDDSELNEDDVFWTGDFAS 60

Query: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120
           DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH
Sbjct: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120

Query: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEI 180
           KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLE+
Sbjct: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV 180

Query: 181 DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 239
           DVD VDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG
Sbjct: 181 DVDYVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 238

[Close]

BLAST of Chy12G212810 vs. ExPASy TrEMBL
Match: A0A6J1G2B0 (uncharacterized protein LOC111450033 OS=Cucurbita moschata OX=3662 GN=LOC111450033 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.5e-107
Identity = 212/241 (87.97%), Postives = 221/241 (91.70%), Query Frame = 0


Query: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDD---SELNEDDVFWTGD 60
           MDL  PSSRFRHR SPSSERFL SF SP  R SNP+S  ALD+D   SELNEDDVFWTGD
Sbjct: 1   MDLTPPSSRFRHRKSPSSERFLLSFSSPSPRPSNPTSANALDNDDNNSELNEDDVFWTGD 60

Query: 61  FASDSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSH 120
           FA+DS HH+HSTPSSSSSSTPRHHIHHLQHHKGFP  ETFGILAALPENEASSSLRNSS+
Sbjct: 61  FAADSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSY 120

Query: 121 FYHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQ 180
           FYHKASVSSSSSSSPSSSRMIPTIPKPPL+RLPLPIS+SLKYQSAPVNVP+MSKA VQR 
Sbjct: 121 FYHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLPISSSLKYQSAPVNVPMMSKAAVQRH 180

Query: 181 LEIDVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 239
            EIDVDDVDE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRT
Sbjct: 181 QEIDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 240

[Close]

BLAST of Chy12G212810 vs. ExPASy TrEMBL
Match: A0A6J1HPU4 (uncharacterized protein LOC111466606 OS=Cucurbita maxima OX=3661 GN=LOC111466606 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 4.5e-107
Identity = 211/240 (87.92%), Postives = 220/240 (91.67%), Query Frame = 0


Query: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDD--SELNEDDVFWTGDF 60
           M+L+ PSSRFRHR SP SERFL SF SP  R SNP+S  ALDDD  SELNEDDVFWTGDF
Sbjct: 1   MELSPPSSRFRHRKSPPSERFLLSFSSPSPRPSNPTSANALDDDNNSELNEDDVFWTGDF 60

Query: 61  ASDSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHF 120
           A+DS HH+HSTPSSSSSSTPRHHIHHLQHHKGFP  ETFGILAALPENEASSSLRNSSHF
Sbjct: 61  AADSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSHF 120

Query: 121 YHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQL 180
           YHKASVSSSSSSSPSSSRMIPTIPKPPL+RLPL IS+SLKYQSAPVNVP+MSKA VQR  
Sbjct: 121 YHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLTISSSLKYQSAPVNVPMMSKAAVQRHQ 180

Query: 181 EIDVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 239
           EIDVDDVDE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRTG
Sbjct: 181 EIDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 240

[Close]

BLAST of Chy12G212810 vs. NCBI nr
Match: KGN64943.1 (hypothetical protein Csa_022813 [Cucumis sativus])

HSP 1 Score: 453 bits (1166), Expect = 1.03e-159
Identity = 236/238 (99.16%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDDSELNEDDVFWTGDFAS 60
           MDLNLPSSRFRHRNSPSSERFLASFPSPPVR+SNPSSTTALDDDSELNEDDVFWTGDFAS
Sbjct: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFAS 60

Query: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120
           DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH
Sbjct: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120

Query: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEI 180
           KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLE+
Sbjct: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV 180

Query: 181 DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 238
           DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG
Sbjct: 181 DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 238

[Close]

BLAST of Chy12G212810 vs. NCBI nr
Match: XP_008461249.1 (PREDICTED: uncharacterized protein LOC103499884 [Cucumis melo] >XP_016903097.1 PREDICTED: uncharacterized protein LOC103499884 [Cucumis melo] >XP_016903098.1 PREDICTED: uncharacterized protein LOC103499884 [Cucumis melo] >XP_016903100.1 PREDICTED: uncharacterized protein LOC103499884 [Cucumis melo] >KAA0035493.1 Senescence regulator [Cucumis melo var. makuwa] >TYK31034.1 Senescence regulator [Cucumis melo var. makuwa])

HSP 1 Score: 448 bits (1152), Expect = 1.40e-157
Identity = 235/238 (98.74%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDDSELNEDDVFWTGDFAS 60
           MDLNL SSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDDSELNEDDVFWTGDFAS
Sbjct: 1   MDLNLHSSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDDSELNEDDVFWTGDFAS 60

Query: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120
           DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH
Sbjct: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120

Query: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEI 180
           KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLE+
Sbjct: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV 180

Query: 181 DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 238
           DVD VDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG
Sbjct: 181 DVDYVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 238

[Close]

BLAST of Chy12G212810 vs. NCBI nr
Match: XP_038894579.1 (uncharacterized protein LOC120083099 [Benincasa hispida])

HSP 1 Score: 431 bits (1108), Expect = 7.06e-151
Identity = 224/238 (94.12%), Postives = 231/238 (97.06%), Query Frame = 0


Query: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDDSELNEDDVFWTGDFAS 60
           MDLNLPS RFRHR SPSSERFLASF SPPVRT+NPSST  +DDD+ELNEDDVFWTGDFA+
Sbjct: 1   MDLNLPSFRFRHRKSPSSERFLASFHSPPVRTANPSSTNGVDDDTELNEDDVFWTGDFAA 60

Query: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120
           DS HHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH
Sbjct: 61  DSAHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120

Query: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEI 180
           KASVSSSSSSSPSSSRMIPTIPKPPL+RLPLPIS+SLKYQSAPVNVPIMSKAVVQRQ EI
Sbjct: 121 KASVSSSSSSSPSSSRMIPTIPKPPLERLPLPISSSLKYQSAPVNVPIMSKAVVQRQQEI 180

Query: 181 DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 238
           DVDDVDEDDGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRTG
Sbjct: 181 DVDDVDEDDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 238

[Close]

BLAST of Chy12G212810 vs. NCBI nr
Match: XP_022945942.1 (uncharacterized protein LOC111450033 [Cucurbita moschata])

HSP 1 Score: 398 bits (1022), Expect = 9.86e-138
Identity = 212/241 (87.97%), Postives = 221/241 (91.70%), Query Frame = 0


Query: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDD---SELNEDDVFWTGD 60
           MDL  PSSRFRHR SPSSERFL SF SP  R SNP+S  ALD+D   SELNEDDVFWTGD
Sbjct: 1   MDLTPPSSRFRHRKSPSSERFLLSFSSPSPRPSNPTSANALDNDDNNSELNEDDVFWTGD 60

Query: 61  FASDSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSH 120
           FA+DS HH+HSTPSSSSSSTPRHHIHHLQHHKGFP  ETFGILAALPENEASSSLRNSS+
Sbjct: 61  FAADSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSY 120

Query: 121 FYHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQ 180
           FYHKASVSSSSSSSPSSSRMIPTIPKPPL+RLPLPIS+SLKYQSAPVNVP+MSKA VQR 
Sbjct: 121 FYHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLPISSSLKYQSAPVNVPMMSKAAVQRH 180

Query: 181 LEIDVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 238
            EIDVDDVDE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRT
Sbjct: 181 QEIDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 240

[Close]

BLAST of Chy12G212810 vs. NCBI nr
Match: XP_022967102.1 (uncharacterized protein LOC111466606 [Cucurbita maxima])

HSP 1 Score: 396 bits (1018), Expect = 3.87e-137
Identity = 211/240 (87.92%), Postives = 220/240 (91.67%), Query Frame = 0


Query: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDD--SELNEDDVFWTGDF 60
           M+L+ PSSRFRHR SP SERFL SF SP  R SNP+S  ALDDD  SELNEDDVFWTGDF
Sbjct: 1   MELSPPSSRFRHRKSPPSERFLLSFSSPSPRPSNPTSANALDDDNNSELNEDDVFWTGDF 60

Query: 61  ASDSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHF 120
           A+DS HH+HSTPSSSSSSTPRHHIHHLQHHKGFP  ETFGILAALPENEASSSLRNSSHF
Sbjct: 61  AADSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSHF 120

Query: 121 YHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQL 180
           YHKASVSSSSSSSPSSSRMIPTIPKPPL+RLPL IS+SLKYQSAPVNVP+MSKA VQR  
Sbjct: 121 YHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLTISSSLKYQSAPVNVPMMSKAAVQRHQ 180

Query: 181 EIDVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 238
           EIDVDDVDE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRTG
Sbjct: 181 EIDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 240

[Close]

BLAST of Chy12G212810 vs. TAIR 10
Match: AT3G15040.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 154.5 bits (389), Expect = 1.3e-37
Identity = 121/246 (49.19%), Postives = 149/246 (60.57%), Query Frame = 0


Query: 27  SPPVRTSNPSSTTALDD--DSELNEDDVFWTGDFASDSVHHSHSTPSS-----SSSSTPR 86
           +P +  S+PSS   + D  D ELNEDD+F        ++  SH+ P +     SS +  +
Sbjct: 4   NPRLDFSSPSSLATISDSADGELNEDDIF--------AIDISHAPPQARHSPVSSPAKQQ 63

Query: 87  HHIHHLQHHK-GFPLPETFGILAALPENEASSSLRNSSHFYHK----------ASVSSSS 146
                LQ  K G    E  GILAALPE+  SSS   S  F+HK          ++ SSSS
Sbjct: 64  TPARQLQRSKSGLKNVEASGILAALPESSGSSSYL-SHVFHHKPAAALSTSVSSTASSSS 123

Query: 147 SS-------SPSSSRMIPTIPKPPLDRLPLPIS--TSLKY-QSAPVNVPIMSKAVVQRQ- 206
           SS       S SS+R IPT PKPP +RLP   S     KY QSAPV VP++S A++ R  
Sbjct: 124 SSGGGASAGSSSSARAIPTAPKPPQERLPFSASFVGGGKYPQSAPVQVPLVSSAMMNRHK 183

Query: 207 -----LEIDVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNA 239
                 ++  DD +E++GEMLPPHEIVARSLAQS +LSCSVLEGAGRTLKGRDLRQVRNA
Sbjct: 184 KEFKLTDVVDDDEEEEEGEMLPPHEIVARSLAQSSLLSCSVLEGAGRTLKGRDLRQVRNA 240

[Close]

BLAST of Chy12G212810 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 75.1 bits (183), Expect = 9.8e-14
Identity = 62/151 (41.06%), Postives = 79/151 (52.32%), Query Frame = 0


Query: 99  ILAALPENEASSSLRN--SSHFYHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTS 158
           + + L E E SS       SHF    S SSSSSSSP + R    +             + 
Sbjct: 32  VWSVLREGETSSPEMKIPKSHF----SSSSSSSSSPWNIRRSKEV-------------SG 91

Query: 159 LKYQSAPVNVPIMSKAVVQRQ---------LEIDVDDVDEDDGEMLPPHEIVARSLAQSP 218
           +K  SAP+NVP  SK     +              DD ++DDG M+PPHE VAR LA++ 
Sbjct: 92  VKQSSAPMNVPDWSKVYGDSKSNRRSSHLHSHAADDDDEDDDGCMVPPHEWVARKLARTQ 151

Query: 219 MLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 239
           + S S+ EG GRTLKGRDL +VRNAV  +TG
Sbjct: 152 ISSFSMCEGVGRTLKGRDLSKVRNAVLSKTG 165

[Close]

BLAST of Chy12G212810 vs. TAIR 10
Match: AT4G21970.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-12
Identity = 59/144 (40.97%), Postives = 77/144 (53.47%), Query Frame = 0


Query: 105 ENEASSSLRNSSHFYHKASVSSS----SSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQ 164
           E E  S LR S     +  +S S    S+SS SS+R IP   +         +S   K  
Sbjct: 9   EEEVWSVLRESETQGPEMKMSKSNNLFSASSSSSARYIPKGNE---------VSGGAKQS 68

Query: 165 SAPVNVPIMSKAV------VQRQLEIDVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVL 224
           SAP+N+P  SK            L     D D+D+G M+PPHE+VA+ LA++ + S S+ 
Sbjct: 69  SAPMNIPDWSKVYGYSKKNTSSHLHSWAID-DDDEGSMVPPHELVAKRLARTQISSFSMC 128

Query: 225 EGAGRTLKGRDLRQVRNAVWRRTG 239
           EG GRTLKGRDL + RNAV  RTG
Sbjct: 129 EGIGRTLKGRDLSKTRNAVLTRTG 142

[Close]

BLAST of Chy12G212810 vs. TAIR 10
Match: AT1G11700.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 67.8 bits (164), Expect = 1.6e-11
Identity = 40/84 (47.62%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 161 SAPVNVPIMSKAVVQRQLEI---DVDDVDEDDGEMLPPHEIVARSLAQSPMLS---CSVL 220
           SAPVNVP  SK      +E      ++ +ED G M+PPHE +A+S  +    S    SV 
Sbjct: 115 SAPVNVPDWSKIYRVNSVESIHESDEEEEEDSGMMMPPHEYLAKSQQRRSRKSGGGGSVF 174

Query: 221 EGAGRTLKGRDLRQVRNAVWRRTG 239
           EG GRTLKGR+LR+VR+A+W +TG
Sbjct: 175 EGVGRTLKGRELRRVRDAIWSQTG 198

[Close]

BLAST of Chy12G212810 vs. TAIR 10
Match: AT5G60680.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 59.7 bits (143), Expect = 4.3e-09
Identity = 53/143 (37.06%), Postives = 74/143 (51.75%), Query Frame = 0


Query: 105 ENEASSSLRNSSHFYHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPV 164
           E++  + + + S  + +   SS  S   SS+R             P   S++    S PV
Sbjct: 35  ESDLFNPIHSDSPDFCRKISSSVRSGKKSSNR-------------PSAASSAAAASSLPV 94

Query: 165 NVPIMSKAV-------VQRQLE--IDVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLE 224
           NVP  SK +        +R +E   D DD +ED G+ LPPHE     LA++ M S SV E
Sbjct: 95  NVPDWSKILRGEYRDNRRRSIEDNDDDDDDNEDGGDWLPPHEF----LAKTRMASFSVHE 154

Query: 225 GAGRTLKGRDLRQVRNAVWRRTG 239
           G GRTLKGRDL +VRNA++ + G
Sbjct: 155 GVGRTLKGRDLSRVRNAIFEKFG 160

The following BLAST results are available for this feature:

BLAST of Chy12G212810 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G212810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT40	3.1e-124	99.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G165750 PE=4 SV=1	[more]
A0A1S4E4F1	1.3e-122	98.74	uncharacterized protein LOC103499884 OS=Cucumis melo OX=3656 GN=LOC103499884 PE=...	[more]
A0A5A7SY45	1.3e-122	98.74	Senescence regulator OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455...	[more]
A0A6J1G2B0	1.5e-107	87.97	uncharacterized protein LOC111450033 OS=Cucurbita moschata OX=3662 GN=LOC1114500...	[more]
A0A6J1HPU4	4.5e-107	87.92	uncharacterized protein LOC111466606 OS=Cucurbita maxima OX=3661 GN=LOC111466606...	[more]

BLAST of Chy12G212810 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64943.1	1.03e-159	99.16	hypothetical protein Csa_022813 [Cucumis sativus]	[more]
XP_008461249.1	1.40e-157	98.74	PREDICTED: uncharacterized protein LOC103499884 [Cucumis melo] >XP_016903097.1 P...	[more]
XP_038894579.1	7.06e-151	94.12	uncharacterized protein LOC120083099 [Benincasa hispida]	[more]
XP_022945942.1	9.86e-138	87.97	uncharacterized protein LOC111450033 [Cucurbita moschata]	[more]
XP_022967102.1	3.87e-137	87.92	uncharacterized protein LOC111466606 [Cucurbita maxima]	[more]

BLAST of Chy12G212810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15040.1	1.3e-37	49.19	Protein of unknown function, DUF584	[more]
AT4G04630.1	9.8e-14	41.06	Protein of unknown function, DUF584	[more]
AT4G21970.1	1.4e-12	40.97	Protein of unknown function, DUF584	[more]
AT1G11700.1	1.6e-11	47.62	Protein of unknown function, DUF584	[more]
AT5G60680.1	4.3e-09	37.06	Protein of unknown function, DUF584	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 45..238 e-value: 7.0E-42 score: 144.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..86
None	No IPR available	PANTHER	PTHR33083	EXPRESSED PROTEIN	coord: 5..238
None	No IPR available	PANTHER	PTHR33083:SF50	SUBFAMILY NOT NAMED	coord: 5..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G212810.1	Chy12G212810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding