Chy12G212800 (gene) Cucumber (hystrix) v1

Overview
NameChy12G212800
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH12: 9860748 .. 9861266 (-)
RNA-Seq ExpressionChy12G212800
SyntenyChy12G212800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTAAGTAAACATCAAAACATTATTTGTCAAACAAACATGTGTAAGTAAACATCAAAACATTATTCATCAAATTAATATGGCAAAACCCGTGACTTATTAACTAACTCTTTGGTGGTGTAAGGCCAGCCCTTATACTTTGAATAACAGCCACATCAGTCTTAAACGCCTCAGCAAGAACCTCATCACTAATCCCACTCGTAAACACCGTCGATGGCAACGACGCAGTGCCAGGGTTAGCACTGGCAAAGGTGGCGATGGCCGTGGCAGAGTTTCGACGGTCAGCATTGAAGGGTCTGGTTGAAGAACTGGTTGGCGGTATCAACGAAGCCAACCTGGAGGCTGCCGCTGACGACAAGGAGAAGCTCGGCAGAACGAGGGTGGGAGTGAGGTGGGTTGATGGAGCCAGCCGGGTACTGGAGGATGGCCATGGAGACGCTCTGGCTGAGAAGGGCTGGGAACTCGGAGAAGGTGGCTTTTGTGGGTTTGAAATTTGGAGGAAAATCGGTGAAAGCTGA

mRNA sequence

ATGTCCACATCAGTCTTAAACGCCTCAGCAAGAACCTCATCACTAATCCCACTCGTAAACACCGTCGATGGCAACGACGCAGTGCCAGGGTTAGCACTGGCAAAGGTGGCGATGGCCGTGGCAGAGTTTCGACGGTCAGCATTGAAGGGTCTGGTTGAAGAACTGGTTGGCGGTATCAACGAAGCCAACCTGGAGGCTGCCGCTGACGACAAGGAGAAGCTCGGCAGAACGAGGGTGGGAGTGAGGTGGGTTGATGGAGCCAGCCGGGTACTGGAGGATGGCCATGGAGACGCTCTGGCTGAGAAGGGCTGGGAACTCGGAGAAGGTGGCTTTTGTGGGTTTGAAATTTGGAGGAAAATCGGTGAAAGCTGA

Coding sequence (CDS)

ATGTCCACATCAGTCTTAAACGCCTCAGCAAGAACCTCATCACTAATCCCACTCGTAAACACCGTCGATGGCAACGACGCAGTGCCAGGGTTAGCACTGGCAAAGGTGGCGATGGCCGTGGCAGAGTTTCGACGGTCAGCATTGAAGGGTCTGGTTGAAGAACTGGTTGGCGGTATCAACGAAGCCAACCTGGAGGCTGCCGCTGACGACAAGGAGAAGCTCGGCAGAACGAGGGTGGGAGTGAGGTGGGTTGATGGAGCCAGCCGGGTACTGGAGGATGGCCATGGAGACGCTCTGGCTGAGAAGGGCTGGGAACTCGGAGAAGGTGGCTTTTGTGGGTTTGAAATTTGGAGGAAAATCGGTGAAAGCTGA

Protein sequence

MSTSVLNASARTSSLIPLVNTVDGNDAVPGLALAKVAMAVAEFRRSALKGLVEELVGGINEANLEAAADDKEKLGRTRVGVRWVDGASRVLEDGHGDALAEKGWELGEGGFCGFEIWRKIGES*
Homology
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BLAST of Chy12G212800 vs. NCBI nr
Match: KAF7811542.1 (putative germin-like protein 9-2 [Senna tora])

HSP 1 Score: 48.9 bits (115), Expect = 2.14e-04
Identity = 29/55 (52.73%), Postives = 34/55 (61.82%), Query Frame = 0 

Query: 69  DDKEKLGRTRVGVRWVDGASRVLEDGHGDALAEKGWELGEGGFCGFEIWRKIGES 123
           +++EKL  TRV V  VDGA RVLE   GDALA +  EL EG FC  E    +GE 
Sbjct: 2   EEEEKLRSTRVRVGRVDGARRVLEQSIGDALAIESRELQEGCFCCSEGGGDLGED 56

The following BLAST results are available for this feature:
BLAST of Chy12G212800 vs.
Match NameE-valueIdentityDescription
BLAST of Chy12G212800 vs.
Match NameE-valueIdentityDescription
BLAST of Chy12G212800 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF7811542.12.14e-0452.73putative germin-like protein 9-2 [Senna tora][more]
BLAST of Chy12G212800 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy12G212800.1Chy12G212800.1mRNA