Chy12G212080 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G212080
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	PsbP domain-containing protein
Location	chrH12: 8610384 .. 8612176 (-)
RNA-Seq Expression	Chy12G212080
Synteny	Chy12G212080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGTAATCCTCGACTCCTTCCTACCTTCAATTCAATCACTGAGTTCTTCATTTCGCCAAAGGATTCCCGGCACTTCTTCTACGCGGTGGCCTATGAATTCATTCCCCAAATGTTGCTCTGAATCTCAATCGGTAATTCTTCACAAACTGTAATCAATCTGGAACTTGTTACTTGCATTTATCGTTACCGCTTATACCTTTCTAATATACAATCAGATTAAAGGCGTTGCAGTTCCAAGGAGGAGTGCAATGGCGTTGATGTTGTCCACTTGTATTTTCTCTAATTCTGCTTTGGCTGTGCCATCCGTTGGGTTATTGGAATACATTGACACTTTTGATGGGTATTCCTTCAAATACCCTAAGAATTGGATTCAAGTTCGAGGGGCGGGGGCTGATATATTCTTCAGGGATCCCTTTGTTCTTGATGAGAATCTTTCGGTGGAGTTCTCGTCGCCGTCTTCATCTAGGTATAACAGCGTTCAGGATTTGGGACCTCCTGAAGAAGCTGGGAAGAAAGTGCTGAAGCAGTATTTGACAGAGTTCATGTCCACAAGGCTTGGAGTTAGAAGGGAATCCAACATTCTTTCTACTTCTTCCAGAATGGCTGATGATGGCAGAACTTACTACCAAGTTGAGGTAACATGCTTCTACACTTATCCTTTCCTGCTTCGATTCTGTCCATTTTGCTCATTAACTTGTTCTTTATCTGCTTATTTGGTTATCATATTCAAAATGTTTAGCTCAAAATGTTTAGGCGCGTTTTGTAACGTGTAGACTTAACATTTTAAAACTACACATCATAAACCAAATGGTTTGGTTACCAAATGAGACCGTCAGTTTCTCAACCAATGATAAATTATTAGATTTATATTCATAAGCTTAATAGATATCTTTTAAAGAGCTCAGCTCAATGAGGACAAAAAATCTCGGGTTCAAATCCCACATCCTAAGTTGTATTACAATACCTTTTATAAAAGAAGATACCTTTTAAAAATCGATGATTCGTGAGACAAATACAACAAAATGAAACTTGTAATCTCACCAAAAACCTCTTCTAATTGTCAAAACAAAAGTTCTCTTTGGTCAAGTGTAATCGTTTCCCTCCAACAAACATTTCCAGTGTTTTCAACAGCAGAAATCACTGGCCGTGAAGCTTAGTAATAAGCAACAGAAAACCAGAATGTTGTAAGAGTAGCACTTCAAAGATTGTTGTGAGCTGTGGCATTCTAGTTTTCGTTATAATGTAATGTCCAGACAAGTAATAATGTAATGTCCAGACTTAGTTTATTTATTTCTTTTTTCTTTTTTTTTTTTACTCTTGAAAAGTTACATTTACTTTGAAACTTATTATTCGAGACAAGAAATGACATTTAAACTTGAAGTTTTTCATATTTCTCTGTGCAACTCTGAAGGGCTTCGTGCAACTTTGAATGGAACTAACCCATAGGTTATAAGTTTAAGTTAATCCTTAATATGTTGTTTAGCTTCTTTGATCTCTATTTCTTCAAATATAAAGTCATATGCTAACAACAATAATCCATACATATCTTACAATTATATGATATCAGGTAAACATAAAGTCATATGCAAACAACAATGAATTGGCAGTAATGCCACAAGATCGGGTGGTTCGTTTGGAATGGGACAGAAGATACCTTTCAGTTCTTGGAGTCGAAAACAGTCGTCTATATGAGTTGAGATTACAAACTCCAGAAAATGTATTTGTAGAAGAAGAAAATGACTTGCGCCAAGTTATGGATTCTTTCCGAGTCAACAAAGTGAATATATGA

mRNA sequence

ATGGCCGTAATCCTCGACTCCTTCCTACCTTCAATTCAATCACTGAGTTCTTCATTTCGCCAAAGGATTCCCGGCACTTCTTCTACGCGGTGGCCTATGAATTCATTCCCCAAATGTTGCTCTGAATCTCAATCGATTAAAGGCGTTGCAGTTCCAAGGAGGAGTGCAATGGCGTTGATGTTGTCCACTTGTATTTTCTCTAATTCTGCTTTGGCTGTGCCATCCGTTGGGTTATTGGAATACATTGACACTTTTGATGGGTATTCCTTCAAATACCCTAAGAATTGGATTCAAGTTCGAGGGGCGGGGGCTGATATATTCTTCAGGGATCCCTTTGTTCTTGATGAGAATCTTTCGGTGGAGTTCTCGTCGCCGTCTTCATCTAGGTATAACAGCGTTCAGGATTTGGGACCTCCTGAAGAAGCTGGGAAGAAAGTGCTGAAGCAGTATTTGACAGAGTTCATGTCCACAAGGCTTGGAGTTAGAAGGGAATCCAACATTCTTTCTACTTCTTCCAGAATGGCTGATGATGGCAGAACTTACTACCAAGTTGAGGTAAACATAAAGTCATATGCAAACAACAATGAATTGGCAGTAATGCCACAAGATCGGGTGGTTCGTTTGGAATGGGACAGAAGATACCTTTCAGTTCTTGGAGTCGAAAACAGTCGTCTATATGAGTTGAGATTACAAACTCCAGAAAATGTATTTGTAGAAGAAGAAAATGACTTGCGCCAAGTTATGGATTCTTTCCGAGTCAACAAAGTGAATATATGA

Coding sequence (CDS)

ATGGCCGTAATCCTCGACTCCTTCCTACCTTCAATTCAATCACTGAGTTCTTCATTTCGCCAAAGGATTCCCGGCACTTCTTCTACGCGGTGGCCTATGAATTCATTCCCCAAATGTTGCTCTGAATCTCAATCGATTAAAGGCGTTGCAGTTCCAAGGAGGAGTGCAATGGCGTTGATGTTGTCCACTTGTATTTTCTCTAATTCTGCTTTGGCTGTGCCATCCGTTGGGTTATTGGAATACATTGACACTTTTGATGGGTATTCCTTCAAATACCCTAAGAATTGGATTCAAGTTCGAGGGGCGGGGGCTGATATATTCTTCAGGGATCCCTTTGTTCTTGATGAGAATCTTTCGGTGGAGTTCTCGTCGCCGTCTTCATCTAGGTATAACAGCGTTCAGGATTTGGGACCTCCTGAAGAAGCTGGGAAGAAAGTGCTGAAGCAGTATTTGACAGAGTTCATGTCCACAAGGCTTGGAGTTAGAAGGGAATCCAACATTCTTTCTACTTCTTCCAGAATGGCTGATGATGGCAGAACTTACTACCAAGTTGAGGTAAACATAAAGTCATATGCAAACAACAATGAATTGGCAGTAATGCCACAAGATCGGGTGGTTCGTTTGGAATGGGACAGAAGATACCTTTCAGTTCTTGGAGTCGAAAACAGTCGTCTATATGAGTTGAGATTACAAACTCCAGAAAATGTATTTGTAGAAGAAGAAAATGACTTGCGCCAAGTTATGGATTCTTTCCGAGTCAACAAAGTGAATATATGA

Protein sequence

MAVILDSFLPSIQSLSSSFRQRIPGTSSTRWPMNSFPKCCSESQSIKGVAVPRRSAMALMLSTCIFSNSALAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEEENDLRQVMDSFRVNKVNI*

Homology

[Close]

BLAST of Chy12G212080 vs. ExPASy Swiss-Prot
Match: O23403 (PsbP domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD1 PE=1 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 9.8e-85
Identity = 157/221 (71.04%), Postives = 182/221 (82.35%), Query Frame = 0


Query: 39  CCSESQSIKGVAVPRRSAMALMLSTCIFSNSALAVPSVG---LLEYIDTFDGYSFKYPKN 98
           C ++++ +  V   +   M L++S  I S + L           EYIDTFDGYSFKYP+N
Sbjct: 67  CLTDAKQVCAVGRRKSMMMGLLMSGLIVSQANLPTAFASTPVFREYIDTFDGYSFKYPQN 126

Query: 99  WIQVRGAGADIFFRDPFVLDENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFM 158
           WIQVRGAGADIFFRDP VLDENLSVEFSSPSSS Y S++DLG PEE GK+VL+QYLTEFM
Sbjct: 127 WIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQYLTEFM 186

Query: 159 STRLGVRRESNILSTSSRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYL 218
           STRLGV+R++NILSTSSR+ADDG+ YYQVEVNIKSYANNNELAVMPQDRV RLEW+RRYL
Sbjct: 187 STRLGVKRQANILSTSSRVADDGKLYYQVEVNIKSYANNNELAVMPQDRVARLEWNRRYL 246

Query: 219 SVLGVENSRLYELRLQTPENVFVEEENDLRQVMDSFRVNKV 257
           +VLGVEN RLY +RLQTPE VF+EEE DLR+VMDSFRV K+
Sbjct: 247 AVLGVENDRLYSIRLQTPEKVFLEEEKDLRRVMDSFRVEKI 287

[Close]

BLAST of Chy12G212080 vs. ExPASy Swiss-Prot
Match: O80634 (Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL1 PE=1 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 7.7e-05
Identity = 37/178 (20.79%), Postives = 74/178 (41.57%), Query Frame = 0


Query: 81  YIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENLSVEFSSPSSSRYNSVQDLGPPE 140
           ++D  DGYS+ YP +W +      D  F+D ++  +N+ V F     +  N + ++GP E
Sbjct: 91  FVDREDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVRF---IPTEKNDIHEVGPME 150

Query: 141 EAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRTYYQVEVNIKS--YANNNELA 200
           E    ++K         +     +   +       +DG+ YY  E  +++  YA  +   
Sbjct: 151 EVVYDLVKH--------KFAAPNQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTS--- 210

Query: 201 VMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEEENDLRQVMDSFRVNKV 257
                            + + V N+R Y L +   E  + + +  L+ V DS ++ ++
Sbjct: 211 ----------------FATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 238

[Close]

BLAST of Chy12G212080 vs. ExPASy TrEMBL
Match: A0A5D3E4R5 (PsbP domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00220 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.1e-130
Identity = 242/257 (94.16%), Postives = 249/257 (96.89%), Query Frame = 0


Query: 1   MAVILDSFLPSIQSLSSSFRQRIPGTSSTRWPMNSFPKCCSESQSIKGVAVPRRSAMALM 60
           MAVIL SFLPSIQ+L+S  RQRIP TSSTR P+ SFPKCCS+SQSIK VAVPRR+AMAL+
Sbjct: 1   MAVILHSFLPSIQTLTSPIRQRIPSTSSTRSPIISFPKCCSQSQSIKDVAVPRRNAMALI 60

Query: 61  LSTCIFSNSALAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENLSV 120
           LSTCIFSNSA AVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENLSV
Sbjct: 61  LSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENLSV 120

Query: 121 EFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRT 180
           EFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRT
Sbjct: 121 EFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRT 180

Query: 181 YYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEE 240
           YYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEE
Sbjct: 181 YYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEE 240

Query: 241 ENDLRQVMDSFRVNKVN 258
           EN+LRQVMDSFRVNKVN
Sbjct: 241 ENELRQVMDSFRVNKVN 257

[Close]

BLAST of Chy12G212080 vs. ExPASy TrEMBL
Match: A0A1S3CLM8 (psbP domain-containing protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502232 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.1e-130
Identity = 242/257 (94.16%), Postives = 249/257 (96.89%), Query Frame = 0


Query: 1   MAVILDSFLPSIQSLSSSFRQRIPGTSSTRWPMNSFPKCCSESQSIKGVAVPRRSAMALM 60
           MAVIL SFLPSIQ+L+S  RQRIP TSSTR P+ SFPKCCS+SQSIK VAVPRR+AMAL+
Sbjct: 1   MAVILHSFLPSIQTLTSPIRQRIPSTSSTRSPIISFPKCCSQSQSIKDVAVPRRNAMALI 60

Query: 61  LSTCIFSNSALAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENLSV 120
           LSTCIFSNSA AVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENLSV
Sbjct: 61  LSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENLSV 120

Query: 121 EFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRT 180
           EFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRT
Sbjct: 121 EFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRT 180

Query: 181 YYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEE 240
           YYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEE
Sbjct: 181 YYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEE 240

Query: 241 ENDLRQVMDSFRVNKVN 258
           EN+LRQVMDSFRVNKVN
Sbjct: 241 ENELRQVMDSFRVNKVN 257

[Close]

BLAST of Chy12G212080 vs. ExPASy TrEMBL
Match: A0A6J1HAH2 (psbP domain-containing protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111462051 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 9.7e-120
Identity = 231/263 (87.83%), Postives = 243/263 (92.40%), Query Frame = 0


Query: 1   MAVILDSFLPSIQSLSSSFRQRIP-GTSSTRW-PMNSFPKC----CSESQSIKGVAVPRR 60
           MAVILDSFLP I +LSSS R+ IP  +SS RW P++S PKC     SESQ IK +AVPRR
Sbjct: 1   MAVILDSFLPPIHTLSSSSRKWIPTASSSPRWPPIDSSPKCRFSLSSESQPIKALAVPRR 60

Query: 61  SAMALMLSTCIFSNSALAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVL 120
           SAMAL+LS+CIFSNSALA  SVGLLEYIDTFDGYSF YPKNWIQVRGAGADIFFRDPFVL
Sbjct: 61  SAMALILSSCIFSNSALAEQSVGLLEYIDTFDGYSFNYPKNWIQVRGAGADIFFRDPFVL 120

Query: 121 DENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM 180
           DEN+SVEFSSPSSSRY SV+DLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM
Sbjct: 121 DENISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM 180

Query: 181 ADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPE 240
           ADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVEN+RLYELRLQTPE
Sbjct: 181 ADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRLYELRLQTPE 240

Query: 241 NVFVEEENDLRQVMDSFRVNKVN 258
           NVFVEEEN+LRQVMDSFRVNKVN
Sbjct: 241 NVFVEEENELRQVMDSFRVNKVN 263

[Close]

BLAST of Chy12G212080 vs. ExPASy TrEMBL
Match: A0A6J1HY63 (psbP domain-containing protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467914 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.6e-117
Identity = 228/263 (86.69%), Postives = 241/263 (91.63%), Query Frame = 0


Query: 1   MAVILDSFLPSIQSLSSSFRQRIPGTS-STRW-PMNSFPK----CCSESQSIKGVAVPRR 60
           MAVILDSFLP I +LSSS R+ IP  S S RW P++S PK      SES+ IK +AVPRR
Sbjct: 1   MAVILDSFLPPIHTLSSSSRKWIPTASPSPRWPPIDSSPKSRFSLTSESKPIKALAVPRR 60

Query: 61  SAMALMLSTCIFSNSALAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVL 120
           SAMAL+LS+CIFSNSA+A  SVGLLEYIDTFDGYSF YPKNWIQVRGAGADIFFRDPFVL
Sbjct: 61  SAMALILSSCIFSNSAMAEQSVGLLEYIDTFDGYSFNYPKNWIQVRGAGADIFFRDPFVL 120

Query: 121 DENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM 180
           DEN+SVEFSSPSSSRY SV+DLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM
Sbjct: 121 DENISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM 180

Query: 181 ADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPE 240
           ADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVEN+RLYELRLQTPE
Sbjct: 181 ADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRLYELRLQTPE 240

Query: 241 NVFVEEENDLRQVMDSFRVNKVN 258
           NVFVEEEN+LRQVMDSFRVNKVN
Sbjct: 241 NVFVEEENELRQVMDSFRVNKVN 263

[Close]

BLAST of Chy12G212080 vs. ExPASy TrEMBL
Match: A0A6J1DTH5 (psbP domain-containing protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023855 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.5e-115
Identity = 227/271 (83.76%), Postives = 241/271 (88.93%), Query Frame = 0


Query: 1   MAVILDSFLPSIQSLSSSFRQRIPGT---SSTRWPMNSFPK------CCSESQSIKGVAV 60
           MAVILDS  P I SLSSS R+RIP T    S RWP +SFPK        S+SQ+IK +AV
Sbjct: 1   MAVILDSLSPPIHSLSSSIRRRIPTTLPSPSPRWPTDSFPKSRASLISQSQSQTIKALAV 60

Query: 61  PRRSAMALMLSTCIFS----NSALA-VPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADI 120
           PRRSAMAL+LSTCIFS    N+ALA  PS GLLEYIDTFDGYSFKYPKNWIQVRGAGADI
Sbjct: 61  PRRSAMALILSTCIFSNTNTNTALADPPSPGLLEYIDTFDGYSFKYPKNWIQVRGAGADI 120

Query: 121 FFRDPFVLDENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180
           FFRDP+VLDENLSVEFSSPSSSRY SV+DLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN
Sbjct: 121 FFRDPYVLDENLSVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESN 180

Query: 181 ILSTSSRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLY 240
           +LSTSSR ADDG+TYYQVEVNIKSYAN+NELAVMPQDRVVRLEWDRRYLSVLGVENSRLY
Sbjct: 181 VLSTSSRTADDGKTYYQVEVNIKSYANSNELAVMPQDRVVRLEWDRRYLSVLGVENSRLY 240

Query: 241 ELRLQTPENVFVEEENDLRQVMDSFRVNKVN 258
           ELRLQTPENVFVEEEN+LRQVMDSFRVN+VN
Sbjct: 241 ELRLQTPENVFVEEENELRQVMDSFRVNRVN 271

[Close]

BLAST of Chy12G212080 vs. NCBI nr
Match: XP_004139523.1 (psbP domain-containing protein 1, chloroplastic isoform X1 [Cucumis sativus] >KAE8652838.1 hypothetical protein Csa_022829 [Cucumis sativus])

HSP 1 Score: 507 bits (1305), Expect = 6.81e-181
Identity = 254/257 (98.83%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 1   MAVILDSFLPSIQSLSSSFRQRIPGTSSTRWPMNSFPKCCSESQSIKGVAVPRRSAMALM 60
           MAVILDSFLPSIQ+LSSSFRQRIP TSSTRWPMNSFPKCCSESQSIKGVAVPRRSAMALM
Sbjct: 1   MAVILDSFLPSIQTLSSSFRQRIPSTSSTRWPMNSFPKCCSESQSIKGVAVPRRSAMALM 60

Query: 61  LSTCIFSNSALAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENLSV 120
           LSTCIFSNSALAV SVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENLSV
Sbjct: 61  LSTCIFSNSALAVSSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENLSV 120

Query: 121 EFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRT 180
           EFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRT
Sbjct: 121 EFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRT 180

Query: 181 YYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEE 240
           YYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEE
Sbjct: 181 YYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEE 240

Query: 241 ENDLRQVMDSFRVNKVN 257
           ENDLRQVMDSFRVNKVN
Sbjct: 241 ENDLRQVMDSFRVNKVN 257

[Close]

BLAST of Chy12G212080 vs. NCBI nr
Match: XP_008464319.1 (PREDICTED: psbP domain-containing protein 1, chloroplastic isoform X1 [Cucumis melo] >KAA0035717.1 psbP domain-containing protein 1 [Cucumis melo var. makuwa] >TYK30829.1 psbP domain-containing protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 482 bits (1240), Expect = 5.52e-171
Identity = 242/257 (94.16%), Postives = 249/257 (96.89%), Query Frame = 0


Query: 1   MAVILDSFLPSIQSLSSSFRQRIPGTSSTRWPMNSFPKCCSESQSIKGVAVPRRSAMALM 60
           MAVIL SFLPSIQ+L+S  RQRIP TSSTR P+ SFPKCCS+SQSIK VAVPRR+AMAL+
Sbjct: 1   MAVILHSFLPSIQTLTSPIRQRIPSTSSTRSPIISFPKCCSQSQSIKDVAVPRRNAMALI 60

Query: 61  LSTCIFSNSALAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENLSV 120
           LSTCIFSNSA AVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENLSV
Sbjct: 61  LSTCIFSNSAFAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENLSV 120

Query: 121 EFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRT 180
           EFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRT
Sbjct: 121 EFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRT 180

Query: 181 YYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEE 240
           YYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEE
Sbjct: 181 YYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEE 240

Query: 241 ENDLRQVMDSFRVNKVN 257
           EN+LRQVMDSFRVNKVN
Sbjct: 241 ENELRQVMDSFRVNKVN 257

[Close]

BLAST of Chy12G212080 vs. NCBI nr
Match: XP_038894971.1 (psbP domain-containing protein 1, chloroplastic [Benincasa hispida] >XP_038894972.1 psbP domain-containing protein 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 457 bits (1176), Expect = 3.62e-161
Identity = 238/261 (91.19%), Postives = 246/261 (94.25%), Query Frame = 0


Query: 1   MAVILDSFLPSIQSLSSSFRQRIPGTS-STRWPMNSFPKCCSESQSIK-GVAVPRRSAMA 60
           MAVIL+SFLP I +L SS RQRIP TS S RWPM+S PKC SESQSIK GVAVPRRSAMA
Sbjct: 1   MAVILNSFLPPIHTLISSIRQRIPCTSPSPRWPMDSSPKCRSESQSIKKGVAVPRRSAMA 60

Query: 61  LMLSTCIFSNSALAVPS--VGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDE 120
           LMLST IFSNSALA PS  VGLLEYIDTFDGYSFKYPKNWIQVRGAG+DIFFRDPFVLDE
Sbjct: 61  LMLSTYIFSNSALAEPSPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGSDIFFRDPFVLDE 120

Query: 121 NLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 180
           NL VEFSSPSSSRYNSVQDLGPPEEAGK+VLKQYLTEFMSTRLGVRRESNILSTSSRMAD
Sbjct: 121 NLLVEFSSPSSSRYNSVQDLGPPEEAGKRVLKQYLTEFMSTRLGVRRESNILSTSSRMAD 180

Query: 181 DGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV 240
           DG+TYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVEN+RLYELRLQTPENV
Sbjct: 181 DGKTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRLYELRLQTPENV 240

Query: 241 FVEEENDLRQVMDSFRVNKVN 257
           FVEEEN+LRQVMDSFRVNKVN
Sbjct: 241 FVEEENELRQVMDSFRVNKVN 261

[Close]

BLAST of Chy12G212080 vs. NCBI nr
Match: XP_022961486.1 (psbP domain-containing protein 1, chloroplastic [Cucurbita moschata] >KAG6590498.1 PsbP domain-containing protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024032.1 PsbP domain-containing protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 446 bits (1148), Expect = 7.19e-157
Identity = 231/263 (87.83%), Postives = 243/263 (92.40%), Query Frame = 0


Query: 1   MAVILDSFLPSIQSLSSSFRQRIP-GTSSTRWP-MNSFPKC----CSESQSIKGVAVPRR 60
           MAVILDSFLP I +LSSS R+ IP  +SS RWP ++S PKC     SESQ IK +AVPRR
Sbjct: 1   MAVILDSFLPPIHTLSSSSRKWIPTASSSPRWPPIDSSPKCRFSLSSESQPIKALAVPRR 60

Query: 61  SAMALMLSTCIFSNSALAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVL 120
           SAMAL+LS+CIFSNSALA  SVGLLEYIDTFDGYSF YPKNWIQVRGAGADIFFRDPFVL
Sbjct: 61  SAMALILSSCIFSNSALAEQSVGLLEYIDTFDGYSFNYPKNWIQVRGAGADIFFRDPFVL 120

Query: 121 DENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM 180
           DEN+SVEFSSPSSSRY SV+DLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM
Sbjct: 121 DENISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM 180

Query: 181 ADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPE 240
           ADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVEN+RLYELRLQTPE
Sbjct: 181 ADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRLYELRLQTPE 240

Query: 241 NVFVEEENDLRQVMDSFRVNKVN 257
           NVFVEEEN+LRQVMDSFRVNKVN
Sbjct: 241 NVFVEEENELRQVMDSFRVNKVN 263

[Close]

BLAST of Chy12G212080 vs. NCBI nr
Match: XP_023515691.1 (psbP domain-containing protein 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 444 bits (1141), Expect = 8.38e-156
Identity = 230/263 (87.45%), Postives = 243/263 (92.40%), Query Frame = 0


Query: 1   MAVILDSFLPSIQSLSSSFRQRIP-GTSSTRWP-MNSFPKC----CSESQSIKGVAVPRR 60
           MAVILDSFLP I +L+SS R+ IP  +SS RWP ++S PK      SESQ IKG+AVPRR
Sbjct: 1   MAVILDSFLPPIHTLTSSSRKWIPTASSSPRWPPIDSSPKSRFSLSSESQPIKGLAVPRR 60

Query: 61  SAMALMLSTCIFSNSALAVPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVL 120
           SAMAL+LS+CIFSNSALA  SVGLLEYIDTFDGYSF YPKNWIQVRGAGADIFFRDPFVL
Sbjct: 61  SAMALILSSCIFSNSALAEQSVGLLEYIDTFDGYSFNYPKNWIQVRGAGADIFFRDPFVL 120

Query: 121 DENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM 180
           DEN+SVEFSSPSSSRY SV+DLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM
Sbjct: 121 DENISVEFSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRM 180

Query: 181 ADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPE 240
           ADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVEN+RLYELRLQTPE
Sbjct: 181 ADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNRLYELRLQTPE 240

Query: 241 NVFVEEENDLRQVMDSFRVNKVN 257
           NVFVEEEN+LRQVMDSFRVNKVN
Sbjct: 241 NVFVEEENELRQVMDSFRVNKVN 263

[Close]

BLAST of Chy12G212080 vs. TAIR 10
Match: AT4G15510.1 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 314.7 bits (805), Expect = 6.9e-86
Identity = 157/221 (71.04%), Postives = 182/221 (82.35%), Query Frame = 0


Query: 39  CCSESQSIKGVAVPRRSAMALMLSTCIFSNSALAVPSVG---LLEYIDTFDGYSFKYPKN 98
           C ++++ +  V   +   M L++S  I S + L           EYIDTFDGYSFKYP+N
Sbjct: 67  CLTDAKQVCAVGRRKSMMMGLLMSGLIVSQANLPTAFASTPVFREYIDTFDGYSFKYPQN 126

Query: 99  WIQVRGAGADIFFRDPFVLDENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFM 158
           WIQVRGAGADIFFRDP VLDENLSVEFSSPSSS Y S++DLG PEE GK+VL+QYLTEFM
Sbjct: 127 WIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQYLTEFM 186

Query: 159 STRLGVRRESNILSTSSRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYL 218
           STRLGV+R++NILSTSSR+ADDG+ YYQVEVNIKSYANNNELAVMPQDRV RLEW+RRYL
Sbjct: 187 STRLGVKRQANILSTSSRVADDGKLYYQVEVNIKSYANNNELAVMPQDRVARLEWNRRYL 246

Query: 219 SVLGVENSRLYELRLQTPENVFVEEENDLRQVMDSFRVNKV 257
           +VLGVEN RLY +RLQTPE VF+EEE DLR+VMDSFRV K+
Sbjct: 247 AVLGVENDRLYSIRLQTPEKVFLEEEKDLRRVMDSFRVEKI 287

[Close]

BLAST of Chy12G212080 vs. TAIR 10
Match: AT4G15510.3 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 310.8 bits (795), Expect = 1.0e-84
Identity = 155/203 (76.35%), Postives = 174/203 (85.71%), Query Frame = 0


Query: 57  MALMLSTCIFSNSALAVPSVG---LLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFV 116
           M L++S  I S + L           EYIDTFDGYSFKYP+NWIQVRGAGADIFFRDP V
Sbjct: 3   MGLLMSGLIVSQANLPTAFASTPVFREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPVV 62

Query: 117 LDENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSR 176
           LDENLSVEFSSPSSS Y S++DLG PEE GK+VL+QYLTEFMSTRLGV+R++NILSTSSR
Sbjct: 63  LDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSSR 122

Query: 177 MADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTP 236
           +ADDG+ YYQVEVNIKSYANNNELAVMPQDRV RLEW+RRYL+VLGVEN RLY +RLQTP
Sbjct: 123 VADDGKLYYQVEVNIKSYANNNELAVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQTP 182

Query: 237 ENVFVEEENDLRQVMDSFRVNKV 257
           E VF+EEE DLR+VMDSFRV K+
Sbjct: 183 EKVFLEEEKDLRRVMDSFRVEKI 205

[Close]

BLAST of Chy12G212080 vs. TAIR 10
Match: AT4G15510.2 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 198.0 bits (502), Expect = 9.5e-51
Identity = 100/158 (63.29%), Postives = 120/158 (75.95%), Query Frame = 0


Query: 39  CCSESQSIKGVAVPRRSAMALMLSTCIFSNSALAVPSVG---LLEYIDTFDGYSFKYPKN 98
           C ++++ +  V   +   M L++S  I S + L           EYIDTFDGYSFKYP+N
Sbjct: 67  CLTDAKQVCAVGRRKSMMMGLLMSGLIVSQANLPTAFASTPVFREYIDTFDGYSFKYPQN 126

Query: 99  WIQVRGAGADIFFRDPFVLDENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFM 158
           WIQVRGAGADIFFRDP VLDENLSVEFSSPSSS Y S++DLG PEE GK+VL+QYLTEFM
Sbjct: 127 WIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYTSLEDLGSPEEVGKRVLRQYLTEFM 186

Query: 159 STRLGVRRESNILSTSSRMADDGRTYYQVEVNIKSYAN 194
           STRLGV+R++NILSTSSR+ADDG+ YYQVEV+     N
Sbjct: 187 STRLGVKRQANILSTSSRVADDGKLYYQVEVSQSQVPN 224

[Close]

BLAST of Chy12G212080 vs. TAIR 10
Match: AT2G39470.1 (PsbP-like protein 2 )

HSP 1 Score: 49.3 bits (116), Expect = 5.4e-06
Identity = 37/178 (20.79%), Postives = 74/178 (41.57%), Query Frame = 0


Query: 81  YIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENLSVEFSSPSSSRYNSVQDLGPPE 140
           ++D  DGYS+ YP +W +      D  F+D ++  +N+ V F     +  N + ++GP E
Sbjct: 91  FVDREDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVRF---IPTEKNDIHEVGPME 150

Query: 141 EAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDGRTYYQVEVNIKS--YANNNELA 200
           E    ++K         +     +   +       +DG+ YY  E  +++  YA  +   
Sbjct: 151 EVVYDLVKH--------KFAAPNQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTS--- 210

Query: 201 VMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENVFVEEENDLRQVMDSFRVNKV 257
                            + + V N+R Y L +   E  + + +  L+ V DS ++ ++
Sbjct: 211 ----------------FATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 238

[Close]

BLAST of Chy12G212080 vs. TAIR 10
Match: AT2G39470.2 (PsbP-like protein 2 )

HSP 1 Score: 47.8 bits (112), Expect = 1.6e-05
Identity = 57/260 (21.92%), Postives = 103/260 (39.62%), Query Frame = 0


Query: 11  SIQSLS---SSFRQRIPGTSSTRWPMNSFPKCCSES----QSIKGVAVPRRSAM---ALM 70
           ++ SLS     F   I   +    P  S   CC  S    Q   G    RR A+     +
Sbjct: 2   AVSSLSIRCGGFSPTISHKTEILCPNPSLKACCLLSSGAYQKGSGNNWKRRQALVGVGTL 61

Query: 71  LSTCIFSNSALA--VPSVGLLEYIDTFDGYSFKYPKNWIQVRGAGADIFFRDPFVLDENL 130
           ++T I +   LA  +P      ++D  DGYS+ YP +W +      D  F+D ++  +N+
Sbjct: 62  VATSIPATLLLAEEIPK-SYSPFVDREDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNV 121

Query: 131 SVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRMADDG 190
            V F     +  N + ++GP EE    ++K         +     +   +       +DG
Sbjct: 122 RVRF---IPTEKNDIHEVGPMEEVVYDLVKH--------KFAAPNQVATIYDMKERVEDG 181

Query: 191 RTYYQVEVNIKS--YANNNELAVMPQDRVVRLEWDRRYLSVLGVENSRLYELRLQTPENV 250
           + YY  E  +++  YA  +                    + + V N+R Y L +   E  
Sbjct: 182 KNYYTFEYGLRTPIYATTS-------------------FATVAVGNNRYYTLIVGANERR 230

Query: 251 FVEEENDLRQVMDSFRVNKV 257
           + + +  L+ V DS ++ ++
Sbjct: 242 WRKVKKQLQVVADSLKILQI 230

The following BLAST results are available for this feature:

BLAST of Chy12G212080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23403	9.8e-85	71.04	PsbP domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
O80634	7.7e-05	20.79	Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis t...	[more]

BLAST of Chy12G212080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E4R5	2.1e-130	94.16	PsbP domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CLM8	2.1e-130	94.16	psbP domain-containing protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=36...	[more]
A0A6J1HAH2	9.7e-120	87.83	psbP domain-containing protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HY63	1.6e-117	86.69	psbP domain-containing protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1DTH5	1.5e-115	83.76	psbP domain-containing protein 1, chloroplastic OS=Momordica charantia OX=3673 G...	[more]

BLAST of Chy12G212080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139523.1	6.81e-181	98.83	psbP domain-containing protein 1, chloroplastic isoform X1 [Cucumis sativus] >KA...	[more]
XP_008464319.1	5.52e-171	94.16	PREDICTED: psbP domain-containing protein 1, chloroplastic isoform X1 [Cucumis m...	[more]
XP_038894971.1	3.62e-161	91.19	psbP domain-containing protein 1, chloroplastic [Benincasa hispida] >XP_03889497...	[more]
XP_022961486.1	7.19e-157	87.83	psbP domain-containing protein 1, chloroplastic [Cucurbita moschata] >KAG6590498...	[more]
XP_023515691.1	8.38e-156	87.45	psbP domain-containing protein 1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy12G212080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15510.1	6.9e-86	71.04	Photosystem II reaction center PsbP family protein	[more]
AT4G15510.3	1.0e-84	76.35	Photosystem II reaction center PsbP family protein	[more]
AT4G15510.2	9.5e-51	63.29	Photosystem II reaction center PsbP family protein	[more]
AT2G39470.1	5.4e-06	20.79	PsbP-like protein 2	[more]
AT2G39470.2	1.6e-05	21.92	PsbP-like protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 78..253 e-value: 1.0E-48 score: 165.4
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 73..253 e-value: 1.2E-51 score: 177.1
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 38..257
None	No IPR available	PANTHER	PTHR31407:SF15	PSBP DOMAIN-CONTAINING PROTEIN 1, CHLOROPLASTIC	coord: 38..257
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 81..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G212080.1	Chy12G212080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048564	photosystem I assembly
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009543	chloroplast thylakoid lumen
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding