Chy12G211800 (gene) Cucumber (hystrix) v1

Overview
NameChy12G211800
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionMitochondrial import inner membrane translocase subunit tim16
LocationchrH12: 8173392 .. 8175218 (+)
RNA-Seq ExpressionChy12G211800
SyntenyChy12G211800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTGTCATGTTATTTTTTTCTTGAGTGTACTTTACTATATATATATATTACCTATTGAATTAGCACTTCCTCATTAGAACTGGTGCATTTACTTCTTTTCTGTTGAGTTCTTTAATTTTGGAAAAGTACAAGAGTGGATGTTGAATAATTTTTAAAGTCGTCATTTTCAGTTTGAGAAATTCCTATAACAGAAGCTCTTTGCTTACATGTTTTTGGACAGGCTGCAAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCGAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTGCAAGTAAGTACACTCTTTTTATTCCACCATATTTCCCTCCTATCTCAAATTGGCCAATTTTTCCTCAATATTATTTTTATTTGGTGTAAAATGTTTATGGCTGGCTTGATCGAAACTTGACTTATAAAACAAAAGAAACTTTCACCTTGTTCTTGAACTATTAGAAGCTATAAATATAATGTAAATGTCAACTTGGGATGTTTAAGTGTTTTGGCAATAAGAACAAAGTTCTGTGTGCACATAGTTTAATTCTGCTTCAGGTGATAGAAATAGATATCAAAGTAATCTATTACATCCTTCTGGTCTTTTTAAGCTTGAATAGTGTCCTGGATCTTCGGCAAGTGGTCAAAAGAATTCGTTATTTTTCAAACCTGTGACATGAACTAGCGATTTGCAAATAAAAAAAGGGATCATTTGCCCCACCAACTTCTTTAGTTGGTGTAAACAACTTTAACTTCAATACTAAACATGATTGTAATTTGCACATTTATTGAGTCATCTTTCCCTATTTTTCTACTTTTCACAATTATTGAGGAAGATTCTACTTTTCGCACTTACTGAGTACTCTACATTCTCCTCTTTCCCCTATTAGAGCCTGATCCTTAATTCTTCTCGAATAGTAATGGAGATTCCCTTGTTACTTATTGTCGATTAGCGAGCATCTCTCTTCAATCCTTCTGCCTATATTATAAAAGAAAGTAGTGAGGAGAGTGCCACCTCCAACCACAAGGGACATTGGAAGGACGGGATGGCAACCCCATTTGTTGTAGATGTGTTTATCCATCTTCTCGACAGCATGTCCTAGGCATAGCTCCTCCGTACTGACCTATCTCCAACAAGCAGAGCGGTTTATTGGCCTGCCTACCGTTCAAAGGAATTGAGTTAATAGGACAGCTCCTAATTTTATATTGCACATATTTTATAATCATTAGTTCTTTTTTCTATTAACAAATAATCATTGAAAATTGAGTGTTCATGGCCTGGATGATAGAGTCCTGCAGTTCCATCCTTAGGGTACCCTTGGAAAAAATGCTTTGATTGAACATGTACCTTTTTAGTTTGAACAAAGTTGATTGTTTATACACTGCTTTTACTTATTAATTAATTAATGGGAGAGAGGTTGGCACCTGTAGTTGTAGTTTATTATGCTTAGTATCAAGTTTTCTTTTGTCTGCTGTAGATGCTTCAAAGTCTGGTGTTGCTCAAGAGACAATGCAAAACACTGTTCGTAGAGCAAGCAAAGTGATGATGGAGCAAGAAGCGAGGCAGATTCTTGGTGTCACCGAGGAAACGCCTTGGGAAGAAGTTGCAAAGGTCAAATATCTATTGCTTTTCACTAAAATAGTTCTGGCTATATATAGATTTTTGACAATCCTTCTCTTACCTATGCAGAAATATGACGCCTTGTTTGAAAGGAATGCTCAAACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGAACAAAAGTCAGGATGCCCCTAGCTGA

mRNA sequence

ATGTCGTGTCATGCTGCAAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCGAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTGCAAATGCTTCAAAGTCTGGTGTTGCTCAAGAGACAATGCAAAACACTGTTCGTAGAGCAAGCAAAGTGATGATGGAGCAAGAAGCGAGGCAGATTCTTGGTGTCACCGAGGAAACGCCTTGGGAAGAAGTTGCAAAGAAATATGACGCCTTGTTTGAAAGGAATGCTCAAACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGAACAAAAGTCAGGATGCCCCTAGCTGA

Coding sequence (CDS)

ATGTCGTGTCATGCTGCAAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCGAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTGCAAATGCTTCAAAGTCTGGTGTTGCTCAAGAGACAATGCAAAACACTGTTCGTAGAGCAAGCAAAGTGATGATGGAGCAAGAAGCGAGGCAGATTCTTGGTGTCACCGAGGAAACGCCTTGGGAAGAAGTTGCAAAGAAATATGACGCCTTGTTTGAAAGGAATGCTCAAACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGAACAAAAGTCAGGATGCCCCTAGCTGA

Protein sequence

MSCHAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMMEQEARQILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKSQDAPS*
Homology
[Close]
BLAST of Chy12G211800 vs. ExPASy Swiss-Prot
Match: Q93VV9 (Mitochondrial import inner membrane translocase subunit PAM16 like 2 OS=Arabidopsis thaliana OX=3702 GN=PAM16L2 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.1e-37
Identity = 82/115 (71.30%), Postives = 95/115 (82.61%), Query Frame = 0 

Query: 5   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMMEQEARQI 64
           A ++LANLIVMGSGI+ RA  QAYRQALANASKSGVAQE MQN VR+A K + EQEARQI
Sbjct: 2   AGRLLANLIVMGSGIIGRAVFQAYRQALANASKSGVAQEAMQNGVRQAGKAITEQEARQI 61

Query: 65  LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKSQDAPS 120
           LGVTE+T WEE+ +KYD LFE NA+ GSFYLQSKVHRAKE LE +Y+++    PS
Sbjct: 62  LGVTEKTSWEEILQKYDKLFENNAKAGSFYLQSKVHRAKECLEVVYRSQGNGTPS 116

[Close]
BLAST of Chy12G211800 vs. ExPASy Swiss-Prot
Match: Q93W66 (Mitochondrial import inner membrane translocase subunit PAM16 like 1 OS=Arabidopsis thaliana OX=3702 GN=PAM16L1 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.7e-31
Identity = 76/110 (69.09%), Postives = 90/110 (81.82%), Query Frame = 0 

Query: 5   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMMEQEARQI 64
           AA++LA++IVMGSGI+ARA  QAYRQALANASK+GVA E  Q T++R   +  E EARQI
Sbjct: 2   AARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQ-TIKRGLTI-GEAEARQI 61

Query: 65  LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKS 115
           LGVTE++ W+E+ KKYD LFERNAQ GSFYLQSKVHRAKE LET YQ  +
Sbjct: 62  LGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQKST 109

[Close]
BLAST of Chy12G211800 vs. ExPASy Swiss-Prot
Match: Q6PBL0 (Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio OX=7955 GN=pam16 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.7e-11
Identity = 53/115 (46.09%), Postives = 70/115 (60.87%), Query Frame = 0 

Query: 6   AKILANLIVMGSGILARAFVQAYRQ--ALANASKSGVAQETMQNTVRRASKVMMEQEARQ 65
           AK LA +IVMG+ ++ RAF +A RQ  A + A+     Q   Q+    +   M  QEA+Q
Sbjct: 2   AKYLAQIIVMGAQVVGRAFARALRQEFAASQAAAEARGQAGRQSAAASSFTGMTLQEAQQ 61

Query: 66  ILGVTEETPWEEVAKKYDALFERN--AQTGSFYLQSKVHRAKERL-ETLYQNKSQ 116
           IL ++  TP EE+ K Y+ LF+ N  A  GSFY+QSKV RAKERL E L  N+ Q
Sbjct: 62  ILNISTLTP-EEIQKNYEHLFKVNDKAVGGSFYIQSKVVRAKERLDEELSINQQQ 115

[Close]
BLAST of Chy12G211800 vs. ExPASy Swiss-Prot
Match: Q9CQV1 (Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus OX=10090 GN=Pam16 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-10
Identity = 50/115 (43.48%), Postives = 73/115 (63.48%), Query Frame = 0 

Query: 6   AKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKV--MMEQEARQ 65
           AK LA +IVMG  ++ RAF +A RQ  A +  +  A+    +    AS +  +  QEA+Q
Sbjct: 2   AKYLAQIIVMGVQVVGRAFARALRQEFAASQAAADARGRAGHQSAAASNLSGLSLQEAQQ 61

Query: 66  ILGVTEETPWEEVAKKYDALFERNAQT--GSFYLQSKVHRAKERLETLYQNKSQD 117
           IL V++ +P EEV K Y+ LF+ N ++  GSFYLQSKV RAKERL+   + ++Q+
Sbjct: 62  ILNVSKLSP-EEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELRIQAQE 115

[Close]
BLAST of Chy12G211800 vs. ExPASy Swiss-Prot
Match: Q9Y3D7 (Mitochondrial import inner membrane translocase subunit TIM16 OS=Homo sapiens OX=9606 GN=PAM16 PE=1 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 2.8e-10
Identity = 50/115 (43.48%), Postives = 73/115 (63.48%), Query Frame = 0 

Query: 6   AKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKV--MMEQEARQ 65
           AK LA +IVMG  ++ RAF +A RQ  A +  +  A+    +    AS +  +  QEA+Q
Sbjct: 2   AKYLAQIIVMGVQVVGRAFARALRQEFAASRAAADARGRAGHRSAAASNLSGLSLQEAQQ 61

Query: 66  ILGVTEETPWEEVAKKYDALFERNAQT--GSFYLQSKVHRAKERLETLYQNKSQD 117
           IL V++ +P EEV K Y+ LF+ N ++  GSFYLQSKV RAKERL+   + ++Q+
Sbjct: 62  ILNVSKLSP-EEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELKIQAQE 115

[Close]
BLAST of Chy12G211800 vs. ExPASy TrEMBL
Match: A0A0A0LW69 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G185100 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.4e-51
Identity = 113/115 (98.26%), Postives = 113/115 (98.26%), Query Frame = 0 

Query: 5   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMMEQEARQI 64
           AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVM EQEARQI
Sbjct: 2   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQI 61

Query: 65  LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKSQDAPS 120
           LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNK QDAPS
Sbjct: 62  LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 116

[Close]
BLAST of Chy12G211800 vs. ExPASy TrEMBL
Match: A0A5D3E4Y7 (Mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001310 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 9.9e-51
Identity = 112/115 (97.39%), Postives = 112/115 (97.39%), Query Frame = 0 

Query: 5   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMMEQEARQI 64
           AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVM EQEARQI
Sbjct: 57  AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQI 116

Query: 65  LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKSQDAPS 120
           LGVTEETPWEEV KKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNK QDAPS
Sbjct: 117 LGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 171

[Close]
BLAST of Chy12G211800 vs. ExPASy TrEMBL
Match: A0A1S3CJP3 (mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo OX=3656 GN=LOC103501727 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.1e-49
Identity = 111/115 (96.52%), Postives = 111/115 (96.52%), Query Frame = 0 

Query: 5   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMMEQEARQI 64
           AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVM EQEARQI
Sbjct: 2   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQI 61

Query: 65  LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKSQDAPS 120
           LGVTEETPWEEV KKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ K QDAPS
Sbjct: 62  LGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 116

[Close]
BLAST of Chy12G211800 vs. ExPASy TrEMBL
Match: A0A6J1DR54 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Momordica charantia OX=3673 GN=LOC111022388 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-48
Identity = 107/115 (93.04%), Postives = 110/115 (95.65%), Query Frame = 0 

Query: 5   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMMEQEARQI 64
           AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQET+QNTVRRASKVM EQEARQI
Sbjct: 2   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETIQNTVRRASKVMTEQEARQI 61

Query: 65  LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKSQDAPS 120
           LGVTEETPWEE+ KKYD LFERNAQ GSFYLQSKVHRAKERLETLYQ+K QDAPS
Sbjct: 62  LGVTEETPWEEIVKKYDTLFERNAQNGSFYLQSKVHRAKERLETLYQSKDQDAPS 116

[Close]
BLAST of Chy12G211800 vs. ExPASy TrEMBL
Match: A0A6J1EF52 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cucurbita moschata OX=3662 GN=LOC111432719 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.6e-48
Identity = 106/115 (92.17%), Postives = 110/115 (95.65%), Query Frame = 0 

Query: 5   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMMEQEARQI 64
           AAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QNTVRRASKVM EQEARQI
Sbjct: 2   AAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQI 61

Query: 65  LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKSQDAPS 120
           LGVT ETPWEE+ KKYDALFE+NAQTGSFYLQSKVHRAKERLETLYQ+K QDAPS
Sbjct: 62  LGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]
BLAST of Chy12G211800 vs. NCBI nr
Match: XP_004139541.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2 [Cucumis sativus] >XP_011655013.1 mitochondrial import inner membrane translocase subunit PAM16 like 2 [Cucumis sativus] >KGN65052.1 hypothetical protein Csa_013024 [Cucumis sativus])

HSP 1 Score: 211 bits (537), Expect = 2.06e-68
Identity = 113/115 (98.26%), Postives = 113/115 (98.26%), Query Frame = 0 

Query: 5   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMMEQEARQI 64
           AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVM EQEARQI
Sbjct: 2   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQI 61

Query: 65  LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKSQDAPS 119
           LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNK QDAPS
Sbjct: 62  LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 116

[Close]
BLAST of Chy12G211800 vs. NCBI nr
Match: KAA0035623.1 (mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo var. makuwa] >TYK30919.1 mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo var. makuwa])

HSP 1 Score: 209 bits (533), Expect = 5.09e-67
Identity = 112/115 (97.39%), Postives = 112/115 (97.39%), Query Frame = 0 

Query: 5   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMMEQEARQI 64
           AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVM EQEARQI
Sbjct: 57  AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQI 116

Query: 65  LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKSQDAPS 119
           LGVTEETPWEEV KKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNK QDAPS
Sbjct: 117 LGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 171

[Close]
BLAST of Chy12G211800 vs. NCBI nr
Match: XP_008463624.1 (PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo] >XP_008463625.1 PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo] >XP_008463626.1 PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo])

HSP 1 Score: 206 bits (524), Expect = 1.98e-66
Identity = 111/115 (96.52%), Postives = 111/115 (96.52%), Query Frame = 0 

Query: 5   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMMEQEARQI 64
           AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVM EQEARQI
Sbjct: 2   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQI 61

Query: 65  LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKSQDAPS 119
           LGVTEETPWEEV KKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ K QDAPS
Sbjct: 62  LGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 116

[Close]
BLAST of Chy12G211800 vs. NCBI nr
Match: XP_022155245.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Momordica charantia] >XP_022155246.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Momordica charantia])

HSP 1 Score: 202 bits (514), Expect = 6.63e-65
Identity = 107/115 (93.04%), Postives = 110/115 (95.65%), Query Frame = 0 

Query: 5   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMMEQEARQI 64
           AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQET+QNTVRRASKVM EQEARQI
Sbjct: 2   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETIQNTVRRASKVMTEQEARQI 61

Query: 65  LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKSQDAPS 119
           LGVTEETPWEE+ KKYD LFERNAQ GSFYLQSKVHRAKERLETLYQ+K QDAPS
Sbjct: 62  LGVTEETPWEEIVKKYDTLFERNAQNGSFYLQSKVHRAKERLETLYQSKDQDAPS 116

[Close]
BLAST of Chy12G211800 vs. NCBI nr
Match: KAG7011201.1 (Mitochondrial import inner membrane translocase subunit PAM16 like 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 202 bits (513), Expect = 9.42e-65
Identity = 107/115 (93.04%), Postives = 110/115 (95.65%), Query Frame = 0 

Query: 5   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMMEQEARQI 64
           AAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QNTVRRASKVM EQEARQI
Sbjct: 2   AAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQI 61

Query: 65  LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKSQDAPS 119
           LGVT ETPWEE+ KKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ+K QDAPS
Sbjct: 62  LGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]
BLAST of Chy12G211800 vs. TAIR 10
Match: AT3G59280.1 (Protein Transporter, Pam16 )

HSP 1 Score: 156.4 bits (394), Expect = 1.5e-38
Identity = 82/115 (71.30%), Postives = 95/115 (82.61%), Query Frame = 0 

Query: 5   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMMEQEARQI 64
           A ++LANLIVMGSGI+ RA  QAYRQALANASKSGVAQE MQN VR+A K + EQEARQI
Sbjct: 2   AGRLLANLIVMGSGIIGRAVFQAYRQALANASKSGVAQEAMQNGVRQAGKAITEQEARQI 61

Query: 65  LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKSQDAPS 120
           LGVTE+T WEE+ +KYD LFE NA+ GSFYLQSKVHRAKE LE +Y+++    PS
Sbjct: 62  LGVTEKTSWEEILQKYDKLFENNAKAGSFYLQSKVHRAKECLEVVYRSQGNGTPS 116

[Close]
BLAST of Chy12G211800 vs. TAIR 10
Match: AT5G61880.1 (Protein Transporter, Pam16 )

HSP 1 Score: 136.7 bits (343), Expect = 1.2e-32
Identity = 76/110 (69.09%), Postives = 90/110 (81.82%), Query Frame = 0 

Query: 5   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMMEQEARQI 64
           AA++LA++IVMGSGI+ARA  QAYRQALANASK+GVA E  Q T++R   +  E EARQI
Sbjct: 2   AARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQ-TIKRGLTI-GEAEARQI 61

Query: 65  LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKS 115
           LGVTE++ W+E+ KKYD LFERNAQ GSFYLQSKVHRAKE LET YQ  +
Sbjct: 62  LGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQKST 109

[Close]
BLAST of Chy12G211800 vs. TAIR 10
Match: AT5G61880.2 (Protein Transporter, Pam16 )

HSP 1 Score: 136.7 bits (343), Expect = 1.2e-32
Identity = 76/110 (69.09%), Postives = 90/110 (81.82%), Query Frame = 0 

Query: 5   AAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMMEQEARQI 64
           AA++LA++IVMGSGI+ARA  QAYRQALANASK+GVA E  Q T++R   +  E EARQI
Sbjct: 2   AARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQ-TIKRGLTI-GEAEARQI 61

Query: 65  LGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKS 115
           LGVTE++ W+E+ KKYD LFERNAQ GSFYLQSKVHRAKE LET YQ  +
Sbjct: 62  LGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQKST 109

The following BLAST results are available for this feature:
BLAST of Chy12G211800 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93VV92.1e-3771.30Mitochondrial import inner membrane translocase subunit PAM16 like 2 OS=Arabidop... [more]
Q93W661.7e-3169.09Mitochondrial import inner membrane translocase subunit PAM16 like 1 OS=Arabidop... [more]
Q6PBL05.7e-1146.09Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio OX=... [more]
Q9CQV12.1e-1043.48Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus OX... [more]
Q9Y3D72.8e-1043.48Mitochondrial import inner membrane translocase subunit TIM16 OS=Homo sapiens OX... [more]
BLAST of Chy12G211800 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LW693.4e-5198.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G185100 PE=3 SV=1[more]
A0A5D3E4Y79.9e-5197.39Mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo va... [more]
A0A1S3CJP31.1e-4996.52mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo OX... [more]
A0A6J1DR541.6e-4893.04mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Mom... [more]
A0A6J1EF524.6e-4892.17mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cuc... [more]
BLAST of Chy12G211800 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139541.12.06e-6898.26mitochondrial import inner membrane translocase subunit PAM16 like 2 [Cucumis sa... [more]
KAA0035623.15.09e-6797.39mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo var.... [more]
XP_008463624.11.98e-6696.52PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumi... [more]
XP_022155245.16.63e-6593.04mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Momor... [more]
KAG7011201.19.42e-6593.04Mitochondrial import inner membrane translocase subunit PAM16 like 2, partial [C... [more]
BLAST of Chy12G211800 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G59280.11.5e-3871.30Protein Transporter, Pam16 [more]
AT5G61880.11.2e-3269.09Protein Transporter, Pam16 [more]
AT5G61880.21.2e-3269.09Protein Transporter, Pam16 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110DnaJ domaincoord: 56..114
e-value: 8.1E-21
score: 75.5
NoneNo IPR availablePFAMPF03656Pam16coord: 8..116
e-value: 8.0E-22
score: 77.6
NoneNo IPR availablePANTHERPTHR12388:SF6MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT PAM16 LIKE 1coord: 5..113
IPR005341Mitochondrial import inner membrane translocase subunit Tim16PANTHERPTHR12388MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULEcoord: 5..113

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy12G211800.1Chy12G211800.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030150 protein import into mitochondrial matrix
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005744 TIM23 mitochondrial import inner membrane translocase complex