Chy12G211710 (gene) Cucumber (hystrix) v1

Overview
NameChy12G211710
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionF-box protein
LocationchrH12: 8058135 .. 8059150 (+)
RNA-Seq ExpressionChy12G211710
SyntenyChy12G211710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAACTGCCGGTGGATTGTGTTGGTCGAATTTTGGCCTTGACGTCCTTGAAAGATGTTTGCAGACTGGTCGGAGTTTCGTCGGTGTTCAGATCAGCGGCTGATTCAAAGGTTGTGTGGAACAATTTTGTGCCTGTGCATTACGAACAGATTATTATTGCATCATCTTCTTCCTCTTTCTGCTCCTTTGTTAATTCATTGTTCAAGAACCCTCTCCATATAGACACCCCAAACAACTCGGTAATGTAATCACATTAATAACCCCATTTTTGTTCATTACTATTATTATTCATTTAGTTAATTAATTTAACTGAATTTTTTTTTATAAAAAAAACAGCTTCTTGTTTTCGATAAACAGATGGAGAGATTAAGTTATGTAATCGGAGCAAAGGAGTTTAAACATATGAAGGTTAGAGGAAGATTAGAATATGGTTCTCACTCTCAATCAAGGTTTGCTTTCAACCTTAATTTCTACTTACTTATTAAATTTCTATACATTTTTTCATCAATATATATAGTTTGTTATTTGAATATATGAGGTGCCTCAAAATGCCTAATATAAACATATTTTCAATTAGTGTATCTGTCTTAATTTTTTTTTTTTATAATATTTTTTCAAAATTTAGATTATATGAATGGATTATTATATAATTTACAGATTTAGTGAGGTGGGTAAGATAGTCTATGACTATGGACTAGCATTTGAAGGAAGAATAGAGGTGAAGAATCTAAATCCACAAACATACTATTCACTTTACATGGTATTCAACACTAGTAAGGATTCATTGAAATACAGAAGATTGGTTGTGTTGGACATGGAAGAAGGAAAAATGGTGCGTGTGGGTGAATCACTTAGACAACGAGAAAGAGAGGACGGATGGCTTGAGATTTTGATGGGTGGATTTTTTATTCAAAAAGATCATGCTTCTATTCATTTCTTTGTAGGTGAAGATAAATATCCTTATACCAACGGTTGTTTTACCATTGAATCCATTGAACTTAGGTTAGCTTAA

mRNA sequence

ATGGATGAACTGCCGGTGGATTGTGTTGGTCGAATTTTGGCCTTGACGTCCTTGAAAGATGTTTGCAGACTGGTCGGAGTTTCGTCGGTGTTCAGATCAGCGGCTGATTCAAAGGTTGTGTGGAACAATTTTGTGCCTGTGCATTACGAACAGATTATTATTGCATCATCTTCTTCCTCTTTCTGCTCCTTTGTTAATTCATTGTTCAAGAACCCTCTCCATATAGACACCCCAAACAACTCGCTTCTTGTTTTCGATAAACAGATGGAGAGATTAAGTTATGTAATCGGAGCAAAGGAGTTTAAACATATGAAGGTTAGAGGAAGATTAGAATATGGTTCTCACTCTCAATCAAGATTTAGTGAGGTGGGTAAGATAGTCTATGACTATGGACTAGCATTTGAAGGAAGAATAGAGGTGAAGAATCTAAATCCACAAACATACTATTCACTTTACATGGTATTCAACACTAGTAAGGATTCATTGAAATACAGAAGATTGGTTGTGTTGGACATGGAAGAAGGAAAAATGGTGCGTGTGGGTGAATCACTTAGACAACGAGAAAGAGAGGACGGATGGCTTGAGATTTTGATGGGTGGATTTTTTATTCAAAAAGATCATGCTTCTATTCATTTCTTTGTAGGTGAAGATAAATATCCTTATACCAACGGTTGTTTTACCATTGAATCCATTGAACTTAGGTTAGCTTAA

Coding sequence (CDS)

ATGGATGAACTGCCGGTGGATTGTGTTGGTCGAATTTTGGCCTTGACGTCCTTGAAAGATGTTTGCAGACTGGTCGGAGTTTCGTCGGTGTTCAGATCAGCGGCTGATTCAAAGGTTGTGTGGAACAATTTTGTGCCTGTGCATTACGAACAGATTATTATTGCATCATCTTCTTCCTCTTTCTGCTCCTTTGTTAATTCATTGTTCAAGAACCCTCTCCATATAGACACCCCAAACAACTCGCTTCTTGTTTTCGATAAACAGATGGAGAGATTAAGTTATGTAATCGGAGCAAAGGAGTTTAAACATATGAAGGTTAGAGGAAGATTAGAATATGGTTCTCACTCTCAATCAAGATTTAGTGAGGTGGGTAAGATAGTCTATGACTATGGACTAGCATTTGAAGGAAGAATAGAGGTGAAGAATCTAAATCCACAAACATACTATTCACTTTACATGGTATTCAACACTAGTAAGGATTCATTGAAATACAGAAGATTGGTTGTGTTGGACATGGAAGAAGGAAAAATGGTGCGTGTGGGTGAATCACTTAGACAACGAGAAAGAGAGGACGGATGGCTTGAGATTTTGATGGGTGGATTTTTTATTCAAAAAGATCATGCTTCTATTCATTTCTTTGTAGGTGAAGATAAATATCCTTATACCAACGGTTGTTTTACCATTGAATCCATTGAACTTAGGTTAGCTTAA

Protein sequence

MDELPVDCVGRILALTSLKDVCRLVGVSSVFRSAADSKVVWNNFVPVHYEQIIIASSSSSFCSFVNSLFKNPLHIDTPNNSLLVFDKQMERLSYVIGAKEFKHMKVRGRLEYGSHSQSRFSEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVFNTSKDSLKYRRLVVLDMEEGKMVRVGESLRQREREDGWLEILMGGFFIQKDHASIHFFVGEDKYPYTNGCFTIESIELRLA*
Homology
BLAST of Chy12G211710 vs. ExPASy Swiss-Prot
Match: Q949S5 (F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.5e-20
Identity = 79/257 (30.74%), Postives = 124/257 (48.25%), Query Frame = 0

Query: 1   MDELPVDCVGRILALTSLKDVCRLVGVSSVFRSAADSKVVWNNFVPVHYEQIIIASSS-S 60
           M+ LP DC+ +IL+LT+  DVCRL  VSS+FRSAA S  VWN+F+P  +     A +   
Sbjct: 1   MNNLPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFLPADFPAGFAAPAGLP 60

Query: 61  SFCSFVNSLFKNPLHIDTPNNSLLVF--DKQMERLSYVIGAKEFKHM--KVRGRLEYGSH 120
           +      SL  NPL I   N +LL F  +++     Y++ A+    +    +    + S 
Sbjct: 61  TRKQLFFSLVDNPLLI---NGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYWHWISL 120

Query: 121 SQSRFSEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVFNTSKDSLKYRR-----LVVL 180
             +RF EV +++  + L   G+I +  L+  T Y+ Y VF  +     +R+     LV+ 
Sbjct: 121 PNTRFGEVAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHSPYGFRQPVETSLVLA 180

Query: 181 DME------EGKMVRVGESLRQRE------REDGWLEILMGGFFIQK-DHASIHFFVGED 235
           D E      +  M+ + +     E      R DGW E+ +G FF ++ D   I   + E 
Sbjct: 181 DTESTDNVVQPSMISLMQDSGGEEGQSPVLRRDGWYEVELGQFFKRRGDLGEIEMSLKET 240

BLAST of Chy12G211710 vs. ExPASy Swiss-Prot
Match: Q9ZVR5 (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 3.0e-16
Identity = 69/256 (26.95%), Postives = 113/256 (44.14%), Query Frame = 0

Query: 2   DELPVDCVGRILALTSLKDVCRLVGVSSVFRSAADSKVVWNNFVPVHYEQIIIASS-SSS 61
           D LP DC+  I++ TS +D C    VS  F SA +S  VW+ F+P  Y  ++  S   SS
Sbjct: 48  DNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLVPPSRVFSS 107

Query: 62  FCSFVNSLFKNPLHIDTPNNSLLVFDKQMERLSYVIGAKEFKHMKVRGRLEYG---SHSQ 121
                 ++  NP+ ++    S  + +K+  +  +++  K+   +      +Y    S  +
Sbjct: 108 KKELYFAICDNPVLVEDGGKSFWL-EKENGKKCFMLSPKKSMWITWVSTPQYWRWISIPE 167

Query: 122 SRFSEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVFNTSKDSLKYR--------RLVV 181
           +RF EV +++        G +  K L+P T YS Y+VF T                 LV 
Sbjct: 168 ARFEEVPELLNVCWFEVRGGMNTKELSPGTRYSAYIVFKTKNGCPNLGDVPVEATVGLVG 227

Query: 182 LDMEEGKMVRVGESLRQRERE-----------DGWLEILMGGFFIQKDHASIHFFVGEDK 235
            +  +  +  VG S ++R+RE           DGW+E  +G FF +     +   + E K
Sbjct: 228 QESSQRHIYFVGPSDQRRDRETRDVTRPTKRKDGWMEAELGQFFNESGCDVVDTSILEIK 287

BLAST of Chy12G211710 vs. ExPASy Swiss-Prot
Match: Q9FLU7 (Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.8e-16
Identity = 70/246 (28.46%), Postives = 114/246 (46.34%), Query Frame = 0

Query: 3   ELPVDCVGRILALTSLKDVCRLVGVSSVFRSAADSKVVWNNFVPVHYEQIIIASSSSSFC 62
           +LP +C+  +++ TS  D CR+  VS + RSAADS   W  F+P  Y ++ I +S S F 
Sbjct: 5   DLPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDY-RMYIDNSLSRFS 64

Query: 63  SFVNSLF----KNPLHIDTPNNSLLVFDKQMERLSYVIGAKEFKHMKVRGR--LEYGSHS 122
           +    LF    ++PL I+    S  + +K+  +  +++ A++   + V       + S  
Sbjct: 65  N--KQLFLRFCESPLLIEDGRTSFWM-EKRSGKKCWMLSARKLDIVWVDSPEFWIWVSIP 124

Query: 123 QSRFSEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVFNTSK-DSLKYRRLVVLDMEEG 182
            SRF EV  ++        G+I    L+  T YS Y+VF   +  S  +  L +      
Sbjct: 125 DSRFEEVAGLLMVCWFEIRGKISTSLLSKATNYSAYLVFKEQEMGSFGFESLPLEVSFRS 184

Query: 183 KMVRVGESLR-------QREREDGWLEILMGGFFIQKDHASIHFFVGEDKYPYTNGCFTI 235
               V  + R       Q  REDGWLEI +G +++  D   I   V E +     G   +
Sbjct: 185 TRTEVYNNRRVFLKSGTQESREDGWLEIELGEYYVGFDDEEIEMSVLETREGGWKGGIIV 244

BLAST of Chy12G211710 vs. ExPASy Swiss-Prot
Match: Q9C7J9 (F-box protein PP2-B13 OS=Arabidopsis thaliana OX=3702 GN=PP2B13 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.6e-15
Identity = 77/277 (27.80%), Postives = 123/277 (44.40%), Query Frame = 0

Query: 4   LPVDCVGRILALTSLKDVCRLVGVSSVFRSAADSKVVWNNFVPVHYEQIIIASSS-SSFC 63
           LP  CV  ILA TS  D      VSSVFR A DS  VW  F+P HY+ +I  S+      
Sbjct: 4   LPEACVANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSHYKSLISQSTDHHRIF 63

Query: 64  SFVNSLFK---NPLHIDTPNNSLLVFDKQMERLSYVIGAKEFK--HMKVRGRLEYGSHSQ 123
           S    +++   + L ID     L   +K   ++SY++ A++    +        + + S 
Sbjct: 64  SSKKEIYRCLCDSLLIDNA-RKLFKINKFSGKISYILSARDISITYSDHASYCSWSNVSD 123

Query: 124 SRFSEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVFNT-----------SKDSLKYRR 183
           SRFSE  +++    L  +G+I+   L+P T Y  Y++              ++ S+K + 
Sbjct: 124 SRFSESAELITTDRLEIKGKIQTTVLSPNTKYGAYLIMKVTNGAYGLDLVPAETSVKSKN 183

Query: 184 ---------LVVLDMEEGKMVR----------------VGESLRQRE---REDGWLEILM 235
                    L  LD ++ +M R                VG   ++RE   R+DGWLEI +
Sbjct: 184 GQNNKNTTYLCCLDEKKQQMKRLFYGNREERMAMTVEAVGGDGKRREPKARDDGWLEIEL 243

BLAST of Chy12G211710 vs. ExPASy Swiss-Prot
Match: Q9C7K0 (F-box protein VBF OS=Arabidopsis thaliana OX=3702 GN=VBF PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.7e-15
Identity = 77/277 (27.80%), Postives = 123/277 (44.40%), Query Frame = 0

Query: 4   LPVDCVGRILALTSLKDVCRLVGVSSVFRSAADSKVVWNNFVPVHYEQIIIASSSSSF-C 63
           LP  C+  ILA TS  D      VSSVFR A DS  VW  F+P  Y+ +I  S+   +  
Sbjct: 4   LPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSDYKSLISQSTDHHWNI 63

Query: 64  SFVNSLFK---NPLHIDTPNNSLLVFDKQMERLSYVIGAKEFK--HMKVRGRLEYGSHSQ 123
           S    +++   + L ID     L   +K   ++SYV+ A++    H        + + S 
Sbjct: 64  SSKKEIYRCLCDSLLIDNA-RKLFKINKFSGKISYVLSARDISITHSDHASYWSWSNVSD 123

Query: 124 SRFSEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVFNTSK-----------DSLKYRR 183
           SRFSE  +++    L  EG+I+ + L+  T Y  Y++   +K            S+K + 
Sbjct: 124 SRFSESAELIITDRLEIEGKIQTRVLSANTRYGAYLIVKVTKGAYGLDLVPAETSIKSKN 183

Query: 184 ---------LVVLDMEEGKMVR----------------VGESLRQRE---REDGWLEILM 235
                    L  LD ++ +M R                VG   ++RE   R+DGW+EI +
Sbjct: 184 GQISKSATYLCCLDEKKQQMKRLFYGNREERMAMTVEAVGGDGKRREPKCRDDGWMEIEL 243

BLAST of Chy12G211710 vs. ExPASy TrEMBL
Match: A0A5A7ST40 (Putative F-box protein PP2-B12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold142G00330 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.8e-73
Identity = 149/236 (63.14%), Postives = 174/236 (73.73%), Query Frame = 0

Query: 1   MDELPVDCVGRILALTSLKDVCRLVGVSSVFRSAADSKVVWNNFVPVHYEQIIIASSSSS 60
           M+ELP +CVGRILA TSLKDVCRL GVSSVFRSAADS  VW NFVPV+Y++III SS+SS
Sbjct: 1   MNELPAECVGRILAFTSLKDVCRLAGVSSVFRSAADSDFVWKNFVPVNYKEIIITSSASS 60

Query: 61  FCSFVNSLFKNPLHIDTPNNSLLVFDKQMERLSYVIGAKEFKHMKVRGRLEYGSHSQSRF 120
           FCSF+N L K PL+I T N S++ F      LSY                         F
Sbjct: 61  FCSFLNFLLKKPLYIGTGNTSVIFFFFFFFLLSY------------------------WF 120

Query: 121 SEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVF-NTSKDSLKYRRLVVLDMEEGKMVR 180
            E+ K+ YD GLA EGRIEVKNLNP+ +YS+YMVF ++S++SLKY+R VVL+MEEGKM+R
Sbjct: 121 RELAKVEYDCGLAIEGRIEVKNLNPEAHYSVYMVFRSSSEESLKYKRFVVLEMEEGKMMR 180

Query: 181 VGESLRQREREDGWLEILMGGFFIQKDHASIHFFVGEDKYPYTNGCFTIESIELRL 236
           VGESL+QR REDGW EILMGGF I++D A IHFFVGEDKYP T GCFTI SI LRL
Sbjct: 181 VGESLKQRRREDGWFEILMGGFCIRRDSAFIHFFVGEDKYPLTAGCFTIRSIHLRL 212

BLAST of Chy12G211710 vs. ExPASy TrEMBL
Match: A0A5D3DFI7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00770 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 7.0e-48
Identity = 98/133 (73.68%), Postives = 113/133 (84.96%), Query Frame = 0

Query: 104 MKVRGRLEYGSHSQSRFSEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVF-NTSKDSL 163
           M VRGRLEY SH QSRF E+ K+ YD GLA EGRIEVKNLNP+ +YS+YMVF ++S++SL
Sbjct: 1   MDVRGRLEYISHFQSRFRELAKVEYDCGLAIEGRIEVKNLNPEAHYSVYMVFRSSSEESL 60

Query: 164 KYRRLVVLDMEEGKMVRVGESLRQREREDGWLEILMGGFFIQKDHASIHFFVGEDKYPYT 223
           KY+R VVL+MEEGKM+RVGESL+QR REDGW EILMGGF I++D A IHFFVGEDKYP T
Sbjct: 61  KYKRFVVLEMEEGKMMRVGESLKQRRREDGWFEILMGGFCIRRDSAFIHFFVGEDKYPLT 120

Query: 224 NGCFTIESIELRL 236
            GCFTI SI LRL
Sbjct: 121 AGCFTIRSIHLRL 133

BLAST of Chy12G211710 vs. ExPASy TrEMBL
Match: A0A6J1EFS1 (putative F-box protein PP2-B12 OS=Cucurbita moschata OX=3662 GN=LOC111432116 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 2.7e-31
Identity = 100/267 (37.45%), Postives = 141/267 (52.81%), Query Frame = 0

Query: 1   MDELPVDCVGRILALTSLKDVCRLVGVSSVFRSAADSKVVWNNFVPVHYEQIIIASSSSS 60
           +++LPV+C+  ILA TS KD CR   VS  FRSAADS+ +W  F+P  Y QII  +SS S
Sbjct: 3   INQLPVECIAAILAFTSPKDACRSATVSPAFRSAADSEALWTTFLPSDYRQIISQASSPS 62

Query: 61  FCSFVNSLFKNPLHIDT--------PNNSLLVFDKQMERLSYVIGAKEFKHMKVRGRLEY 120
             SF+NSL K  L+             NS  V +K+  +  Y+IGA++ +       + +
Sbjct: 63  TTSFLNSLSKKALYFHLCDHQLLIGSGNSSFVLEKESGKKCYMIGARDLE-------IIW 122

Query: 121 GSHSQ---------SRFSEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVFNTSKDSLK 180
           G+ +Q         SRFSEV ++   + L  +GRIE +NL+PQT Y+ Y+VF   +D  +
Sbjct: 123 GNSTQYWTWNPNPISRFSEVAELQMVWWLEIKGRIEARNLSPQTNYAAYLVFKLVEDRYQ 182

Query: 181 YR----RLVVL-------DMEEGKMV----RVGESLRQREREDGWLEILMGGFFIQ-KDH 235
            R    R V+L       ++EEGK      R G  +   ER DGW+EI MG  F +  D 
Sbjct: 183 RRGFRERPVLLRVYFEGAEVEEGKTAILDPREGSLVAFEERADGWMEIEMGEIFNELGDD 242

BLAST of Chy12G211710 vs. ExPASy TrEMBL
Match: A0A6J1IZ41 (putative F-box protein PP2-B12 OS=Cucurbita maxima OX=3661 GN=LOC111479760 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 9.4e-29
Identity = 97/260 (37.31%), Postives = 135/260 (51.92%), Query Frame = 0

Query: 1   MDELPVDCVGRILALTSLKDVCRLVGVSSVFRSAADSKVVWNNFVPVHYEQIIIASSSSS 60
           +++LPV+C+  ILA TS KD CR   VS  FRSAADS+ +W  F+P  Y QII  +SS S
Sbjct: 3   INQLPVECISSILAFTSPKDACRSAAVSLAFRSAADSEALWTTFLPSDYRQIISQASSPS 62

Query: 61  FCSFVNSLFKNPLHI---DTP-----NNSLLVFDKQMERLSYVIGAKEFKHM--KVRGRL 120
             SF+NSL K  L+    D P      NS    +K   +  Y+IGA++   +        
Sbjct: 63  TTSFLNSLSKKALYFHLCDRPLLIGSGNSSFALEKDSGKKCYLIGARDLGIIWGNSSQYW 122

Query: 121 EYGSHSQSRFSEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVFNTSKDSLKYR----R 180
            + S+  SRF EV ++   + L  +G IE +NL+PQT Y+ Y+VF   +D  + R    R
Sbjct: 123 TWNSNPISRFCEVAELQRVWWLEIKGSIEARNLSPQTNYAAYLVFKLVEDRYQRRGFRER 182

Query: 181 LVVL-------DMEEGKMV----RVGESLRQREREDGWLEILMGGFFIQ-KDHASIHFFV 235
            V+L       ++EEGK      R G  +   ER DGW+EI MG  F +  D  SI   +
Sbjct: 183 PVLLRVYLEGAEVEEGKTAILEPREGSHVAFEERADGWMEIEMGEIFNELGDDGSIVCHL 242

BLAST of Chy12G211710 vs. ExPASy TrEMBL
Match: A0A0A0L9G5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G132530 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.2e-26
Identity = 93/263 (35.36%), Postives = 137/263 (52.09%), Query Frame = 0

Query: 1   MDELPVDCVGRILALTSLKDVCRLVGVSSVFRSAADSKVVWNNFVPVHYEQIIIASSSSS 60
           +++LP +C+  ILA TS KD CR   VS  FRSAADS  +W  F+P  Y QII  +SSSS
Sbjct: 3   INQLPAECLSCILAFTSPKDACRSAVVSPAFRSAADSDALWTTFLPSDYRQIISQASSSS 62

Query: 61  FCSFVNSLFKNPLHIDTPN--------NSLLVFDKQMERLSYVIGAKEFKHM--KVRGRL 120
             SF+NSL K  L++   +        NS  V +K   +  Y+IGA++ + +        
Sbjct: 63  TSSFLNSLSKKALYLRLSDHLLFIGSGNSGFVLEKGSGKKCYMIGARDLEIVWGSSPAYW 122

Query: 121 EYGSHSQSRFSEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVFNTSKDSLKYR----- 180
            + S   SRFSEV ++ Y + L  +G+IE +NL+P+T Y+ Y VF   +D+         
Sbjct: 123 TWQSIPTSRFSEVAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETT 182

Query: 181 ------RLVVLDMEEGKMVRV------GESLRQREREDGWLEILMGGFFIQ-KDHASIHF 235
                      ++EE +  RV      G S+   ER DGW+E+ MG FF +  D  SI F
Sbjct: 183 PVSLEVHFEGAEVEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSIIF 242

BLAST of Chy12G211710 vs. NCBI nr
Match: KAA0033778.1 (putative F-box protein PP2-B12 [Cucumis melo var. makuwa])

HSP 1 Score: 286 bits (733), Expect = 7.60e-95
Identity = 149/237 (62.87%), Postives = 174/237 (73.42%), Query Frame = 0

Query: 1   MDELPVDCVGRILALTSLKDVCRLVGVSSVFRSAADSKVVWNNFVPVHYEQIIIASSSSS 60
           M+ELP +CVGRILA TSLKDVCRL GVSSVFRSAADS  VW NFVPV+Y++III SS+SS
Sbjct: 1   MNELPAECVGRILAFTSLKDVCRLAGVSSVFRSAADSDFVWKNFVPVNYKEIIITSSASS 60

Query: 61  FCSFVNSLFKNPLHIDTPNNSLLVFDKQMERLSYVIGAKEFKHMKVRGRLEYGSHSQSRF 120
           FCSF+N L K PL+I T N S++ F      LSY                         F
Sbjct: 61  FCSFLNFLLKKPLYIGTGNTSVIFFFFFFFLLSYW------------------------F 120

Query: 121 SEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVF-NTSKDSLKYRRLVVLDMEEGKMVR 180
            E+ K+ YD GLA EGRIEVKNLNP+ +YS+YMVF ++S++SLKY+R VVL+MEEGKM+R
Sbjct: 121 RELAKVEYDCGLAIEGRIEVKNLNPEAHYSVYMVFRSSSEESLKYKRFVVLEMEEGKMMR 180

Query: 181 VGESLRQREREDGWLEILMGGFFIQKDHASIHFFVGEDKYPYTNGCFTIESIELRLA 236
           VGESL+QR REDGW EILMGGF I++D A IHFFVGEDKYP T GCFTI SI LRL 
Sbjct: 181 VGESLKQRRREDGWFEILMGGFCIRRDSAFIHFFVGEDKYPLTAGCFTIRSIHLRLT 213

BLAST of Chy12G211710 vs. NCBI nr
Match: TYK22356.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 201 bits (510), Expect = 4.11e-62
Identity = 98/134 (73.13%), Postives = 113/134 (84.33%), Query Frame = 0

Query: 104 MKVRGRLEYGSHSQSRFSEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVF-NTSKDSL 163
           M VRGRLEY SH QSRF E+ K+ YD GLA EGRIEVKNLNP+ +YS+YMVF ++S++SL
Sbjct: 1   MDVRGRLEYISHFQSRFRELAKVEYDCGLAIEGRIEVKNLNPEAHYSVYMVFRSSSEESL 60

Query: 164 KYRRLVVLDMEEGKMVRVGESLRQREREDGWLEILMGGFFIQKDHASIHFFVGEDKYPYT 223
           KY+R VVL+MEEGKM+RVGESL+QR REDGW EILMGGF I++D A IHFFVGEDKYP T
Sbjct: 61  KYKRFVVLEMEEGKMMRVGESLKQRRREDGWFEILMGGFCIRRDSAFIHFFVGEDKYPLT 120

Query: 224 NGCFTIESIELRLA 236
            GCFTI SI LRL 
Sbjct: 121 AGCFTIRSIHLRLT 134

BLAST of Chy12G211710 vs. NCBI nr
Match: XP_023528482.1 (putative F-box protein PP2-B12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 147 bits (370), Expect = 2.87e-39
Identity = 99/260 (38.08%), Postives = 141/260 (54.23%), Query Frame = 0

Query: 1   MDELPVDCVGRILALTSLKDVCRLVGVSSVFRSAADSKVVWNNFVPVHYEQIIIASSSSS 60
           +++LPV+C+  ILA TS KD CR   VS  FRSAADS+ +W  F+P  Y QII  +SS S
Sbjct: 3   INQLPVECIATILAFTSPKDACRSATVSPAFRSAADSEALWTTFLPSDYRQIISQASSPS 62

Query: 61  FCSFVNSLFKNPLHIDTPNNSLLV--------FDKQMERLSYVIGAKEFKHMKVRGRL-- 120
             SF+NSL K  L+    +  LL+         +K+  +  Y+IGA++ + +        
Sbjct: 63  TTSFLNSLSKKALYFHLCDRLLLIGSGNSSFALEKESGKKCYMIGARDLEIIWGNSTQYW 122

Query: 121 EYGSHSQSRFSEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVFNTSKDSLKYR----R 180
            + S+  SRFSEV ++   + L  +GRIE +NL+PQT Y+ Y+VF   +D  + R    R
Sbjct: 123 TWNSNPISRFSEVAELQTVWWLEIKGRIEARNLSPQTNYAAYLVFKLVEDRYQRRGFRER 182

Query: 181 LVVL-------DMEEGKMV----RVGESLRQREREDGWLEILMGGFFIQK-DHASIHFFV 234
            V+L       ++EEGKM     R G  +   ER DGW+EI MG  F +  D  SI F +
Sbjct: 183 PVLLRVYFEGAEVEEGKMAILDPREGSLVAFEERADGWMEIEMGEIFNELGDDGSIIFHL 242

BLAST of Chy12G211710 vs. NCBI nr
Match: XP_022924695.1 (putative F-box protein PP2-B12 [Cucurbita moschata])

HSP 1 Score: 146 bits (368), Expect = 5.71e-39
Identity = 100/267 (37.45%), Postives = 143/267 (53.56%), Query Frame = 0

Query: 1   MDELPVDCVGRILALTSLKDVCRLVGVSSVFRSAADSKVVWNNFVPVHYEQIIIASSSSS 60
           +++LPV+C+  ILA TS KD CR   VS  FRSAADS+ +W  F+P  Y QII  +SS S
Sbjct: 3   INQLPVECIAAILAFTSPKDACRSATVSPAFRSAADSEALWTTFLPSDYRQIISQASSPS 62

Query: 61  FCSFVNSLFKNPLHIDTPNNSLL--------VFDKQMERLSYVIGAKEFKHMKVRGRLEY 120
             SF+NSL K  L+    ++ LL        V +K+  +  Y+IGA++ +       + +
Sbjct: 63  TTSFLNSLSKKALYFHLCDHQLLIGSGNSSFVLEKESGKKCYMIGARDLE-------IIW 122

Query: 121 GSHSQ---------SRFSEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVFNTSKDSLK 180
           G+ +Q         SRFSEV ++   + L  +GRIE +NL+PQT Y+ Y+VF   +D  +
Sbjct: 123 GNSTQYWTWNPNPISRFSEVAELQMVWWLEIKGRIEARNLSPQTNYAAYLVFKLVEDRYQ 182

Query: 181 YR----RLVVL-------DMEEGKMV----RVGESLRQREREDGWLEILMGGFFIQK-DH 234
            R    R V+L       ++EEGK      R G  +   ER DGW+EI MG  F +  D 
Sbjct: 183 RRGFRERPVLLRVYFEGAEVEEGKTAILDPREGSLVAFEERADGWMEIEMGEIFNELGDD 242

BLAST of Chy12G211710 vs. NCBI nr
Match: KAG6582459.1 (putative F-box protein PP2-B12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 145 bits (367), Expect = 8.05e-39
Identity = 100/267 (37.45%), Postives = 143/267 (53.56%), Query Frame = 0

Query: 1   MDELPVDCVGRILALTSLKDVCRLVGVSSVFRSAADSKVVWNNFVPVHYEQIIIASSSSS 60
           +++LPV+C+  ILA TS KD CR   VS  FRSAADS+ +W  F+P  Y QII  +SS S
Sbjct: 3   INQLPVECIATILAFTSPKDACRSATVSPAFRSAADSEALWTTFLPSDYRQIISQASSPS 62

Query: 61  FCSFVNSLFKNPLHIDTPNNSLL--------VFDKQMERLSYVIGAKEFKHMKVRGRLEY 120
             SF+NSL K  L+    ++ LL        V +K+  +  Y+IGA++ +       + +
Sbjct: 63  TTSFLNSLSKKALYFHLCDHQLLIGSGNSSFVLEKESGKKCYMIGARDLE-------IIW 122

Query: 121 GSHSQ---------SRFSEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVFNTSKDSLK 180
           G+ +Q         SRFSEV ++   + L  +GRIE +NL+PQT Y+ Y+VF   +D  +
Sbjct: 123 GNSTQYWTWNPNPISRFSEVAELQMVWWLEIKGRIEARNLSPQTNYAAYLVFKLVEDRYQ 182

Query: 181 YR----RLVVL-------DMEEGKMV----RVGESLRQREREDGWLEILMGGFFIQK-DH 234
            R    R V+L       ++EEGK      R G  +   ER DGW+EI MG  F +  D 
Sbjct: 183 RRGFRERPVLLRVYFEGAEVEEGKTAILDPREGSLVAFEERADGWMEIEMGEIFNELGDD 242

BLAST of Chy12G211710 vs. TAIR 10
Match: AT1G80110.1 (phloem protein 2-B11 )

HSP 1 Score: 99.8 bits (247), Expect = 3.2e-21
Identity = 79/257 (30.74%), Postives = 124/257 (48.25%), Query Frame = 0

Query: 1   MDELPVDCVGRILALTSLKDVCRLVGVSSVFRSAADSKVVWNNFVPVHYEQIIIASSS-S 60
           M+ LP DC+ +IL+LT+  DVCRL  VSS+FRSAA S  VWN+F+P  +     A +   
Sbjct: 1   MNNLPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFLPADFPAGFAAPAGLP 60

Query: 61  SFCSFVNSLFKNPLHIDTPNNSLLVF--DKQMERLSYVIGAKEFKHM--KVRGRLEYGSH 120
           +      SL  NPL I   N +LL F  +++     Y++ A+    +    +    + S 
Sbjct: 61  TRKQLFFSLVDNPLLI---NGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYWHWISL 120

Query: 121 SQSRFSEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVFNTSKDSLKYRR-----LVVL 180
             +RF EV +++  + L   G+I +  L+  T Y+ Y VF  +     +R+     LV+ 
Sbjct: 121 PNTRFGEVAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHSPYGFRQPVETSLVLA 180

Query: 181 DME------EGKMVRVGESLRQRE------REDGWLEILMGGFFIQK-DHASIHFFVGED 235
           D E      +  M+ + +     E      R DGW E+ +G FF ++ D   I   + E 
Sbjct: 181 DTESTDNVVQPSMISLMQDSGGEEGQSPVLRRDGWYEVELGQFFKRRGDLGEIEMSLKET 240

BLAST of Chy12G211710 vs. TAIR 10
Match: AT2G02250.1 (phloem protein 2-B2 )

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-17
Identity = 69/256 (26.95%), Postives = 113/256 (44.14%), Query Frame = 0

Query: 2   DELPVDCVGRILALTSLKDVCRLVGVSSVFRSAADSKVVWNNFVPVHYEQIIIASS-SSS 61
           D LP DC+  I++ TS +D C    VS  F SA +S  VW+ F+P  Y  ++  S   SS
Sbjct: 48  DNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLVPPSRVFSS 107

Query: 62  FCSFVNSLFKNPLHIDTPNNSLLVFDKQMERLSYVIGAKEFKHMKVRGRLEYG---SHSQ 121
                 ++  NP+ ++    S  + +K+  +  +++  K+   +      +Y    S  +
Sbjct: 108 KKELYFAICDNPVLVEDGGKSFWL-EKENGKKCFMLSPKKSMWITWVSTPQYWRWISIPE 167

Query: 122 SRFSEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVFNTSKDSLKYR--------RLVV 181
           +RF EV +++        G +  K L+P T YS Y+VF T                 LV 
Sbjct: 168 ARFEEVPELLNVCWFEVRGGMNTKELSPGTRYSAYIVFKTKNGCPNLGDVPVEATVGLVG 227

Query: 182 LDMEEGKMVRVGESLRQRERE-----------DGWLEILMGGFFIQKDHASIHFFVGEDK 235
            +  +  +  VG S ++R+RE           DGW+E  +G FF +     +   + E K
Sbjct: 228 QESSQRHIYFVGPSDQRRDRETRDVTRPTKRKDGWMEAELGQFFNESGCDVVDTSILEIK 287

BLAST of Chy12G211710 vs. TAIR 10
Match: AT5G24560.1 (phloem protein 2-B12 )

HSP 1 Score: 85.9 bits (211), Expect = 4.8e-17
Identity = 70/246 (28.46%), Postives = 114/246 (46.34%), Query Frame = 0

Query: 3   ELPVDCVGRILALTSLKDVCRLVGVSSVFRSAADSKVVWNNFVPVHYEQIIIASSSSSFC 62
           +LP +C+  +++ TS  D CR+  VS + RSAADS   W  F+P  Y ++ I +S S F 
Sbjct: 5   DLPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDY-RMYIDNSLSRFS 64

Query: 63  SFVNSLF----KNPLHIDTPNNSLLVFDKQMERLSYVIGAKEFKHMKVRGR--LEYGSHS 122
           +    LF    ++PL I+    S  + +K+  +  +++ A++   + V       + S  
Sbjct: 65  N--KQLFLRFCESPLLIEDGRTSFWM-EKRSGKKCWMLSARKLDIVWVDSPEFWIWVSIP 124

Query: 123 QSRFSEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVFNTSK-DSLKYRRLVVLDMEEG 182
            SRF EV  ++        G+I    L+  T YS Y+VF   +  S  +  L +      
Sbjct: 125 DSRFEEVAGLLMVCWFEIRGKISTSLLSKATNYSAYLVFKEQEMGSFGFESLPLEVSFRS 184

Query: 183 KMVRVGESLR-------QREREDGWLEILMGGFFIQKDHASIHFFVGEDKYPYTNGCFTI 235
               V  + R       Q  REDGWLEI +G +++  D   I   V E +     G   +
Sbjct: 185 TRTEVYNNRRVFLKSGTQESREDGWLEIELGEYYVGFDDEEIEMSVLETREGGWKGGIIV 244

BLAST of Chy12G211710 vs. TAIR 10
Match: AT1G56240.1 (phloem protein 2-B13 )

HSP 1 Score: 84.0 bits (206), Expect = 1.8e-16
Identity = 77/277 (27.80%), Postives = 123/277 (44.40%), Query Frame = 0

Query: 4   LPVDCVGRILALTSLKDVCRLVGVSSVFRSAADSKVVWNNFVPVHYEQIIIASSS-SSFC 63
           LP  CV  ILA TS  D      VSSVFR A DS  VW  F+P HY+ +I  S+      
Sbjct: 4   LPEACVANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSHYKSLISQSTDHHRIF 63

Query: 64  SFVNSLFK---NPLHIDTPNNSLLVFDKQMERLSYVIGAKEFK--HMKVRGRLEYGSHSQ 123
           S    +++   + L ID     L   +K   ++SY++ A++    +        + + S 
Sbjct: 64  SSKKEIYRCLCDSLLIDNA-RKLFKINKFSGKISYILSARDISITYSDHASYCSWSNVSD 123

Query: 124 SRFSEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVFNT-----------SKDSLKYRR 183
           SRFSE  +++    L  +G+I+   L+P T Y  Y++              ++ S+K + 
Sbjct: 124 SRFSESAELITTDRLEIKGKIQTTVLSPNTKYGAYLIMKVTNGAYGLDLVPAETSVKSKN 183

Query: 184 ---------LVVLDMEEGKMVR----------------VGESLRQRE---REDGWLEILM 235
                    L  LD ++ +M R                VG   ++RE   R+DGWLEI +
Sbjct: 184 GQNNKNTTYLCCLDEKKQQMKRLFYGNREERMAMTVEAVGGDGKRREPKARDDGWLEIEL 243

BLAST of Chy12G211710 vs. TAIR 10
Match: AT1G56250.1 (phloem protein 2-B14 )

HSP 1 Score: 82.8 bits (203), Expect = 4.1e-16
Identity = 77/277 (27.80%), Postives = 123/277 (44.40%), Query Frame = 0

Query: 4   LPVDCVGRILALTSLKDVCRLVGVSSVFRSAADSKVVWNNFVPVHYEQIIIASSSSSF-C 63
           LP  C+  ILA TS  D      VSSVFR A DS  VW  F+P  Y+ +I  S+   +  
Sbjct: 4   LPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSDYKSLISQSTDHHWNI 63

Query: 64  SFVNSLFK---NPLHIDTPNNSLLVFDKQMERLSYVIGAKEFK--HMKVRGRLEYGSHSQ 123
           S    +++   + L ID     L   +K   ++SYV+ A++    H        + + S 
Sbjct: 64  SSKKEIYRCLCDSLLIDNA-RKLFKINKFSGKISYVLSARDISITHSDHASYWSWSNVSD 123

Query: 124 SRFSEVGKIVYDYGLAFEGRIEVKNLNPQTYYSLYMVFNTSK-----------DSLKYRR 183
           SRFSE  +++    L  EG+I+ + L+  T Y  Y++   +K            S+K + 
Sbjct: 124 SRFSESAELIITDRLEIEGKIQTRVLSANTRYGAYLIVKVTKGAYGLDLVPAETSIKSKN 183

Query: 184 ---------LVVLDMEEGKMVR----------------VGESLRQRE---REDGWLEILM 235
                    L  LD ++ +M R                VG   ++RE   R+DGW+EI +
Sbjct: 184 GQISKSATYLCCLDEKKQQMKRLFYGNREERMAMTVEAVGGDGKRREPKCRDDGWMEIEL 243

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q949S54.5e-2030.74F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1[more]
Q9ZVR53.0e-1626.95Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2[more]
Q9FLU76.8e-1628.46Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV... [more]
Q9C7J92.6e-1527.80F-box protein PP2-B13 OS=Arabidopsis thaliana OX=3702 GN=PP2B13 PE=2 SV=1[more]
Q9C7K05.7e-1527.80F-box protein VBF OS=Arabidopsis thaliana OX=3702 GN=VBF PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A5A7ST402.8e-7363.14Putative F-box protein PP2-B12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A5D3DFI77.0e-4873.68F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00770... [more]
A0A6J1EFS12.7e-3137.45putative F-box protein PP2-B12 OS=Cucurbita moschata OX=3662 GN=LOC111432116 PE=... [more]
A0A6J1IZ419.4e-2937.31putative F-box protein PP2-B12 OS=Cucurbita maxima OX=3661 GN=LOC111479760 PE=4 ... [more]
A0A0A0L9G51.2e-2635.36F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G132530 PE=4 ... [more]
Match NameE-valueIdentityDescription
KAA0033778.17.60e-9562.87putative F-box protein PP2-B12 [Cucumis melo var. makuwa][more]
TYK22356.14.11e-6273.13F-box protein [Cucumis melo var. makuwa][more]
XP_023528482.12.87e-3938.08putative F-box protein PP2-B12 [Cucurbita pepo subsp. pepo][more]
XP_022924695.15.71e-3937.45putative F-box protein PP2-B12 [Cucurbita moschata][more]
KAG6582459.18.05e-3937.45putative F-box protein PP2-B12, partial [Cucurbita argyrosperma subsp. sororia][more]
Match NameE-valueIdentityDescription
AT1G80110.13.2e-2130.74phloem protein 2-B11 [more]
AT2G02250.12.2e-1726.95phloem protein 2-B2 [more]
AT5G24560.14.8e-1728.46phloem protein 2-B12 [more]
AT1G56240.11.8e-1627.80phloem protein 2-B13 [more]
AT1G56250.14.1e-1627.80phloem protein 2-B14 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 4..44
e-value: 0.002
score: 27.4
IPR001810F-box domainPFAMPF00646F-boxcoord: 2..44
e-value: 2.1E-4
score: 21.1
IPR001810F-box domainPROSITEPS50181FBOXcoord: 1..44
score: 8.994076
IPR025886Phloem protein 2-likePFAMPF14299PP2coord: 113..234
e-value: 2.9E-14
score: 53.4
NoneNo IPR availablePANTHERPTHR32278FAMILY NOT NAMEDcoord: 2..161
NoneNo IPR availablePANTHERPTHR32278:SF15F-BOX PROTEIN PP2-B10-LIKEcoord: 2..161
coord: 177..234
NoneNo IPR availablePANTHERPTHR32278FAMILY NOT NAMEDcoord: 177..234
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 2..52

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy12G211710.1Chy12G211710.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding