Chy12G211690 (gene) Cucumber (hystrix) v1

Overview
NameChy12G211690
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionAdenine nucleotide alpha hydrolases-like superfamily protein
LocationchrH12: 8056031 .. 8056306 (+)
RNA-Seq ExpressionChy12G211690
SyntenyChy12G211690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCGAAAAGTTGGCATAGCCATTGATGGAAGCAACAAAGAAGAGAGCCGAGCACTAATTGCCATGGTGCTCCAACACCTAAAACCAATGGATATGGTTTACATCATATACATCAAACCGACTCAAGAACCAAGAGGCGCTGACTGGGGTGGCGTGGGTGGTGGTGGCGAAAATTATCTCTTACCAGAAGAGATTTTGGAGCCTTTAATAAAGGAAAACATTCCGATCATGCCGCTTGTCGTGGAAGACAAAGATGTAAGAACGGTCTGGTGA

mRNA sequence

ATGTCTCGAAAAGTTGGCATAGCCATTGATGGAAGCAACAAAGAAGAGAGCCGAGCACTAATTGCCATGGTGCTCCAACACCTAAAACCAATGGATATGGTTTACATCATATACATCAAACCGACTCAAGAACCAAGAGGCGCTGACTGGGGTGGCGTGGGTGGTGGTGGCGAAAATTATCTCTTACCAGAAGAGATTTTGGAGCCTTTAATAAAGGAAAACATTCCGATCATGCCGCTTGTCGTGGAAGACAAAGATGTAAGAACGGTCTGGTGA

Coding sequence (CDS)

ATGTCTCGAAAAGTTGGCATAGCCATTGATGGAAGCAACAAAGAAGAGAGCCGAGCACTAATTGCCATGGTGCTCCAACACCTAAAACCAATGGATATGGTTTACATCATATACATCAAACCGACTCAAGAACCAAGAGGCGCTGACTGGGGTGGCGTGGGTGGTGGTGGCGAAAATTATCTCTTACCAGAAGAGATTTTGGAGCCTTTAATAAAGGAAAACATTCCGATCATGCCGCTTGTCGTGGAAGACAAAGATGTAAGAACGGTCTGGTGA

Protein sequence

MSRKVGIAIDGSNKEESRALIAMVLQHLKPMDMVYIIYIKPTQEPRGADWGGVGGGGENYLLPEEILEPLIKENIPIMPLVVEDKDVRTVW*
Homology
BLAST of Chy12G211690 vs. ExPASy TrEMBL
Match: W9R8A6 (Usp domain-containing protein OS=Morus notabilis OX=981085 GN=L484_022222 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.4e-04
Identity = 33/110 (30.00%), Postives = 56/110 (50.91%), Query Frame = 0

Query: 3   RKVGIAIDGSNKEESRALIAMVLQHLKPMDMVYIIYIKPTQEPRGADWGGV----GGGGE 62
           R++ IA+D SN E + A+   V  +L+P D V ++Y++PT    GADWG +    GGG +
Sbjct: 32  RRIAIAVDLSN-ESAYAVRWAVQNYLRPGDAVILLYVRPTSVLYGADWGSIDLNLGGGND 91

Query: 63  NYLLPEE--------------------ILEPLIKENIPIMPLVVEDKDVR 89
           + +  EE                    + +PL++  IP    +V+D D++
Sbjct: 92  DVVSSEESQRKKLEDDFDAFTTTKAQDLAQPLVEAQIPFRIHIVKDHDMK 140

BLAST of Chy12G211690 vs. ExPASy TrEMBL
Match: A0A2P5BKJ5 (Universal stress protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_230830 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.0e-04
Identity = 35/107 (32.71%), Postives = 54/107 (50.47%), Query Frame = 0

Query: 3   RKVGIAIDGSNKEESRALIAMVLQHLKPMDMVYIIYIKPTQEPRGADWGGV--------G 62
           RK+GIA+D S+ E + A+   V  +L+P D V ++++ PT    GADWG V        G
Sbjct: 42  RKIGIAVDLSD-ESAFAVKWAVQNYLRPGDAVVLVHVSPTSVLYGADWGAVDATAPTDLG 101

Query: 63  GGGENY-------------LLPEEILEPLIKENIPIMPLVVEDKDVR 89
           GGG++                  +I EPL +  IP    +V+D D++
Sbjct: 102 GGGDSQRRNLENDLDAFTTAKANDIAEPLERAEIPYKIHIVKDHDMK 147

BLAST of Chy12G211690 vs. NCBI nr
Match: KAG5551173.1 (hypothetical protein RHGRI_009564 [Rhododendron griersonianum])

HSP 1 Score: 52.4 bits (124), Expect = 6.19e-06
Identity = 32/101 (31.68%), Postives = 54/101 (53.47%), Query Frame = 0

Query: 3   RKVGIAIDGSNKEESRALIAMVLQHLKPMDMVYIIYIKPTQEPRGADWGGVG----GGGE 62
           R++GIA+D S+ E + A+   V Q+L+P D V +++++PT    GADWG V       G 
Sbjct: 42  RRIGIAVDLSD-ESAFAVEWSVRQYLRPGDAVILLHVRPTSVLYGADWGAVDLSVVNEGS 101

Query: 63  NYLLPEE-----------ILEPLIKENIPIMPLVVEDKDVR 88
              L +E           + +PL++  IP    +V+D D++
Sbjct: 102 KQKLEDEFDAFTVTKADDVAQPLVEAGIPFKIHIVKDHDMK 141

BLAST of Chy12G211690 vs. NCBI nr
Match: XP_030519956.1 (universal stress protein PHOS32-like, partial [Rhodamnia argentea])

HSP 1 Score: 51.2 bits (121), Expect = 1.77e-05
Identity = 31/105 (29.52%), Postives = 53/105 (50.48%), Query Frame = 0

Query: 2   SRKVGIAIDGSNKEESRALIAMVLQHLKPMDMVYIIYIKPTQEPRGADWGGVGGGGENYL 61
           SRK+ IA+D S+ E + A+   V  +L+P D V +++++PT    GADWG       ++L
Sbjct: 41  SRKIAIAVDLSD-ESAYAVRWAVRDYLRPGDAVVLLHVRPTSVLYGADWGAGSSPSADHL 100

Query: 62  LPEE------------------ILEPLIKENIPIMPLVVEDKDVR 88
             EE                  + +PL++  IP    +V+D D++
Sbjct: 101 SGEEEEKLESDFDSLTAAKLDNLAQPLVEAGIPFKIHIVKDHDMK 144

BLAST of Chy12G211690 vs. NCBI nr
Match: KAF3337078.1 (putative universal stress protein [Carex littledalei])

HSP 1 Score: 52.0 bits (123), Expect = 2.06e-05
Identity = 33/105 (31.43%), Postives = 53/105 (50.48%), Query Frame = 0

Query: 2   SRKVGIAIDGSNKEESRALIAMVLQHLKPMDMVYIIYIKPTQEPRGADWGGVG-----GG 61
           +R++GIA+D S+ E + AL   V  +L+P D V +++++PT    GADWG        G 
Sbjct: 12  NRRIGIAVDLSD-ESAYALRWAVHNYLRPGDSVILLHVRPTSVLYGADWGSTSIADQEGS 71

Query: 62  GENY-------------LLPEEILEPLIKENIPIMPLVVEDKDVR 88
            E                  +E+ +PL+  NIP    VV+D D++
Sbjct: 72  SEEVQQKREEDFDAFTSTKAQELAQPLVDANIPFKIHVVKDHDMK 115

BLAST of Chy12G211690 vs. NCBI nr
Match: CAA7394637.1 (unnamed protein product [Spirodela intermedia])

HSP 1 Score: 51.6 bits (122), Expect = 3.48e-05
Identity = 31/103 (30.10%), Postives = 54/103 (52.43%), Query Frame = 0

Query: 3   RKVGIAIDGSNKEESRALIAMVLQHLKPMDMVYIIYIKPTQEPRGADWGGV---GGGGEN 62
           R++ IA+D S+ E + A+   V  +L+P D V +++++PT    GADWG V   GGG E 
Sbjct: 46  RRIAIAVDLSD-ESAYAVKWAVQNYLRPGDAVILLHVRPTSVLYGADWGSVDVSGGGSEG 105

Query: 63  YLLP--------------EEILEPLIKENIPIMPLVVEDKDVR 88
                             +++ +PL++  IP    +V+D D++
Sbjct: 106 ISQQKLEEDFDAFTAGKAQDLAQPLVEAQIPFKIHIVKDHDMK 147

BLAST of Chy12G211690 vs. NCBI nr
Match: QGP73752.1 (Universal stress protein A-like protein [Sedum alfredii])

HSP 1 Score: 51.2 bits (121), Expect = 4.54e-05
Identity = 33/103 (32.04%), Postives = 55/103 (53.40%), Query Frame = 0

Query: 3   RKVGIAIDGSNKEESRALIAMVLQHLKPMDMVYIIYIKPTQEPRGADWGGVGGG------ 62
           RK+GIA+D S+ E + A+   V  +L+P D V +I+++PT    GADWG V         
Sbjct: 39  RKIGIAVDLSD-ESAFAVKWAVQNYLRPGDAVILIHVRPTSVLYGADWGSVDHTVKDTDE 98

Query: 63  -GENYLLPE----------EILEPLIKENIPIMPLVVEDKDVR 88
            G+  L  +          ++ +PL++E IP    +V+D D++
Sbjct: 99  EGKKKLESDFDAFTTGKANDLAQPLVEEGIPFKIHIVKDHDMK 140

BLAST of Chy12G211690 vs. TAIR 10
Match: AT1G11360.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 42.7 bits (99), Expect = 1.8e-04
Identity = 29/105 (27.62%), Postives = 53/105 (50.48%), Query Frame = 0

Query: 3   RKVGIAIDGSNKEESRALIAMVLQHLKPMDMVYIIYIKPTQEPRGADWGGVG-------G 62
           RK+GIA+D S+ E + A+   V  +L+  D V +++++PT    GADWG +         
Sbjct: 38  RKIGIAVDLSD-ESAYAVQWAVQNYLRSGDAVVLLHVQPTSVLYGADWGAMDLSPQWDPN 97

Query: 63  GGENYLLPE------------EILEPLIKENIPIMPLVVEDKDVR 89
             E+    E            ++ +PL++ +IP    +V+D D++
Sbjct: 98  NEESQRKLEDDFDIVTNKKASDVAQPLVEADIPFKIHIVKDHDMK 141

BLAST of Chy12G211690 vs. TAIR 10
Match: AT1G11360.2 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 42.7 bits (99), Expect = 1.8e-04
Identity = 29/105 (27.62%), Postives = 53/105 (50.48%), Query Frame = 0

Query: 3   RKVGIAIDGSNKEESRALIAMVLQHLKPMDMVYIIYIKPTQEPRGADWGGVG-------G 62
           RK+GIA+D S+ E + A+   V  +L+  D V +++++PT    GADWG +         
Sbjct: 38  RKIGIAVDLSD-ESAYAVQWAVQNYLRSGDAVVLLHVQPTSVLYGADWGAMDLSPQWDPN 97

Query: 63  GGENYLLPE------------EILEPLIKENIPIMPLVVEDKDVR 89
             E+    E            ++ +PL++ +IP    +V+D D++
Sbjct: 98  NEESQRKLEDDFDIVTNKKASDVAQPLVEADIPFKIHIVKDHDMK 141

BLAST of Chy12G211690 vs. TAIR 10
Match: AT1G11360.3 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 42.7 bits (99), Expect = 1.8e-04
Identity = 29/105 (27.62%), Postives = 53/105 (50.48%), Query Frame = 0

Query: 3   RKVGIAIDGSNKEESRALIAMVLQHLKPMDMVYIIYIKPTQEPRGADWGGVG-------G 62
           RK+GIA+D S+ E + A+   V  +L+  D V +++++PT    GADWG +         
Sbjct: 38  RKIGIAVDLSD-ESAYAVQWAVQNYLRSGDAVVLLHVQPTSVLYGADWGAMDLSPQWDPN 97

Query: 63  GGENYLLPE------------EILEPLIKENIPIMPLVVEDKDVR 89
             E+    E            ++ +PL++ +IP    +V+D D++
Sbjct: 98  NEESQRKLEDDFDIVTNKKASDVAQPLVEADIPFKIHIVKDHDMK 141

BLAST of Chy12G211690 vs. TAIR 10
Match: AT1G11360.4 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 42.7 bits (99), Expect = 1.8e-04
Identity = 29/105 (27.62%), Postives = 53/105 (50.48%), Query Frame = 0

Query: 3   RKVGIAIDGSNKEESRALIAMVLQHLKPMDMVYIIYIKPTQEPRGADWGGVG-------G 62
           RK+GIA+D S+ E + A+   V  +L+  D V +++++PT    GADWG +         
Sbjct: 38  RKIGIAVDLSD-ESAYAVQWAVQNYLRSGDAVVLLHVQPTSVLYGADWGAMDLSPQWDPN 97

Query: 63  GGENYLLPE------------EILEPLIKENIPIMPLVVEDKDVR 89
             E+    E            ++ +PL++ +IP    +V+D D++
Sbjct: 98  NEESQRKLEDDFDIVTNKKASDVAQPLVEADIPFKIHIVKDHDMK 141

BLAST of Chy12G211690 vs. TAIR 10
Match: AT4G27320.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 41.6 bits (96), Expect = 4.0e-04
Identity = 21/50 (42.00%), Postives = 31/50 (62.00%), Query Frame = 0

Query: 3  RKVGIAIDGSNKEESRALIAMVLQH-LKPMDMVYIIYIKPTQEPRGADWG 52
          RK+G+A+D S  EES   +   + H ++P D V I+++ PT    GADWG
Sbjct: 45 RKIGVAVDLS--EESAFAVRWAVDHYIRPGDAVVILHVSPTSVLFGADWG 92

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
W9R8A62.4e-0430.00Usp domain-containing protein OS=Morus notabilis OX=981085 GN=L484_022222 PE=4 S... [more]
A0A2P5BKJ57.0e-0432.71Universal stress protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_230830 P... [more]
Match NameE-valueIdentityDescription
KAG5551173.16.19e-0631.68hypothetical protein RHGRI_009564 [Rhododendron griersonianum][more]
XP_030519956.11.77e-0529.52universal stress protein PHOS32-like, partial [Rhodamnia argentea][more]
KAF3337078.12.06e-0531.43putative universal stress protein [Carex littledalei][more]
CAA7394637.13.48e-0530.10unnamed protein product [Spirodela intermedia][more]
QGP73752.14.54e-0532.04Universal stress protein A-like protein [Sedum alfredii][more]
Match NameE-valueIdentityDescription
AT1G11360.11.8e-0427.62Adenine nucleotide alpha hydrolases-like superfamily protein [more]
AT1G11360.21.8e-0427.62Adenine nucleotide alpha hydrolases-like superfamily protein [more]
AT1G11360.31.8e-0427.62Adenine nucleotide alpha hydrolases-like superfamily protein [more]
AT1G11360.41.8e-0427.62Adenine nucleotide alpha hydrolases-like superfamily protein [more]
AT4G27320.14.0e-0442.00Adenine nucleotide alpha hydrolases-like superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy12G211690.1Chy12G211690.1mRNA