Chy12G211690 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCGAAAAGTTGGCATAGCCATTGATGGAAGCAACAAAGAAGAGAGCCGAGCACTAATTGCCATGGTGCTCCAACACCTAAAACCAATGGATATGGTTTACATCATATACATCAAACCGACTCAAGAACCAAGAGGCGCTGACTGGGGTGGCGTGGGTGGTGGTGGCGAAAATTATCTCTTACCAGAAGAGATTTTGGAGCCTTTAATAAAGGAAAACATTCCGATCATGCCGCTTGTCGTGGAAGACAAAGATGTAAGAACGGTCTGGTGA ATGTCTCGAAAAGTTGGCATAGCCATTGATGGAAGCAACAAAGAAGAGAGCCGAGCACTAATTGCCATGGTGCTCCAACACCTAAAACCAATGGATATGGTTTACATCATATACATCAAACCGACTCAAGAACCAAGAGGCGCTGACTGGGGTGGCGTGGGTGGTGGTGGCGAAAATTATCTCTTACCAGAAGAGATTTTGGAGCCTTTAATAAAGGAAAACATTCCGATCATGCCGCTTGTCGTGGAAGACAAAGATGTAAGAACGGTCTGGTGA ATGTCTCGAAAAGTTGGCATAGCCATTGATGGAAGCAACAAAGAAGAGAGCCGAGCACTAATTGCCATGGTGCTCCAACACCTAAAACCAATGGATATGGTTTACATCATATACATCAAACCGACTCAAGAACCAAGAGGCGCTGACTGGGGTGGCGTGGGTGGTGGTGGCGAAAATTATCTCTTACCAGAAGAGATTTTGGAGCCTTTAATAAAGGAAAACATTCCGATCATGCCGCTTGTCGTGGAAGACAAAGATGTAAGAACGGTCTGGTGA MSRKVGIAIDGSNKEESRALIAMVLQHLKPMDMVYIIYIKPTQEPRGADWGGVGGGGENYLLPEEILEPLIKENIPIMPLVVEDKDVRTVW* Homology
BLAST of Chy12G211690 vs. ExPASy TrEMBL
Match: W9R8A6 (Usp domain-containing protein OS=Morus notabilis OX=981085 GN=L484_022222 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.4e-04 Identity = 33/110 (30.00%), Postives = 56/110 (50.91%), Query Frame = 0
BLAST of Chy12G211690 vs. ExPASy TrEMBL
Match: A0A2P5BKJ5 (Universal stress protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_230830 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 7.0e-04 Identity = 35/107 (32.71%), Postives = 54/107 (50.47%), Query Frame = 0
BLAST of Chy12G211690 vs. NCBI nr
Match: KAG5551173.1 (hypothetical protein RHGRI_009564 [Rhododendron griersonianum]) HSP 1 Score: 52.4 bits (124), Expect = 6.19e-06 Identity = 32/101 (31.68%), Postives = 54/101 (53.47%), Query Frame = 0
BLAST of Chy12G211690 vs. NCBI nr
Match: XP_030519956.1 (universal stress protein PHOS32-like, partial [Rhodamnia argentea]) HSP 1 Score: 51.2 bits (121), Expect = 1.77e-05 Identity = 31/105 (29.52%), Postives = 53/105 (50.48%), Query Frame = 0
BLAST of Chy12G211690 vs. NCBI nr
Match: KAF3337078.1 (putative universal stress protein [Carex littledalei]) HSP 1 Score: 52.0 bits (123), Expect = 2.06e-05 Identity = 33/105 (31.43%), Postives = 53/105 (50.48%), Query Frame = 0
BLAST of Chy12G211690 vs. NCBI nr
Match: CAA7394637.1 (unnamed protein product [Spirodela intermedia]) HSP 1 Score: 51.6 bits (122), Expect = 3.48e-05 Identity = 31/103 (30.10%), Postives = 54/103 (52.43%), Query Frame = 0
BLAST of Chy12G211690 vs. NCBI nr
Match: QGP73752.1 (Universal stress protein A-like protein [Sedum alfredii]) HSP 1 Score: 51.2 bits (121), Expect = 4.54e-05 Identity = 33/103 (32.04%), Postives = 55/103 (53.40%), Query Frame = 0
BLAST of Chy12G211690 vs. TAIR 10
Match: AT1G11360.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 42.7 bits (99), Expect = 1.8e-04 Identity = 29/105 (27.62%), Postives = 53/105 (50.48%), Query Frame = 0
BLAST of Chy12G211690 vs. TAIR 10
Match: AT1G11360.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 42.7 bits (99), Expect = 1.8e-04 Identity = 29/105 (27.62%), Postives = 53/105 (50.48%), Query Frame = 0
BLAST of Chy12G211690 vs. TAIR 10
Match: AT1G11360.3 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 42.7 bits (99), Expect = 1.8e-04 Identity = 29/105 (27.62%), Postives = 53/105 (50.48%), Query Frame = 0
BLAST of Chy12G211690 vs. TAIR 10
Match: AT1G11360.4 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 42.7 bits (99), Expect = 1.8e-04 Identity = 29/105 (27.62%), Postives = 53/105 (50.48%), Query Frame = 0
BLAST of Chy12G211690 vs. TAIR 10
Match: AT4G27320.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 41.6 bits (96), Expect = 4.0e-04 Identity = 21/50 (42.00%), Postives = 31/50 (62.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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