Chy12G211560 (gene) Cucumber (hystrix) v1

Overview
NameChy12G211560
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH12: 7787896 .. 7788132 (+)
RNA-Seq ExpressionChy12G211560
SyntenyChy12G211560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATGCCAATCAAGAACTTTGGTAGGCAAAAGTTTCTCAAGGGGGTAACCAAGATGCATCTGGATGTGGTGAAGGTGTTCTACAATGCAAACTATCACTCTTTAAAATACTACGCGCTAGTGGACGAAAAATGCATCTACTTCGACACTGAGGCCACCAACGAACTTTATGACTTGCCTATGGGAGAAAAGACATCAGGAGAAGTTTTGATTGAAAGTACCTTAAAAGGGTAG

mRNA sequence

ATGGGGATGCCAATCAAGAACTTTGGTAGGCAAAAGTTTCTCAAGGGGGTAACCAAGATGCATCTGGATGTGGTGAAGGTGTTCTACAATGCAAACTATCACTCTTTAAAATACTACGCGCTAGTGGACGAAAAATGCATCTACTTCGACACTGAGGCCACCAACGAACTTTATGACTTGCCTATGGGAGAAAAGACATCAGGAGAAGTTTTGATTGAAAGTACCTTAAAAGGGTAG

Coding sequence (CDS)

ATGGGGATGCCAATCAAGAACTTTGGTAGGCAAAAGTTTCTCAAGGGGGTAACCAAGATGCATCTGGATGTGGTGAAGGTGTTCTACAATGCAAACTATCACTCTTTAAAATACTACGCGCTAGTGGACGAAAAATGCATCTACTTCGACACTGAGGCCACCAACGAACTTTATGACTTGCCTATGGGAGAAAAGACATCAGGAGAAGTTTTGATTGAAAGTACCTTAAAAGGGTAG

Protein sequence

MGMPIKNFGRQKFLKGVTKMHLDVVKVFYNANYHSLKYYALVDEKCIYFDTEATNELYDLPMGEKTSGEVLIESTLKG*
Homology
BLAST of Chy12G211560 vs. ExPASy TrEMBL
Match: A0A5A7SQ81 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00070 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.3e-10
Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 0

Query: 8   FGRQKFLKGVTKMHLDVVKVFYNANYHSLKYYALVDEKCIYFDTEATNELYDLPMGEKTS 67
           FG +KF KG +K+ L+VV+ FY ++++  +YYA++DEK  YF+ EA N+LY+ P   +T 
Sbjct: 74  FGWRKFFKGTSKIRLEVVRKFYASDHNQAEYYAIMDEKSAYFNIEAINKLYNFPFDAETP 133

Query: 68  GEVLIESTLK 78
             VLI +TLK
Sbjct: 134 DHVLITATLK 143

BLAST of Chy12G211560 vs. ExPASy TrEMBL
Match: A0A5A7U4E3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46449G00020 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.2e-08
Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 0

Query: 12  KFLKGVTKMHLDVVKVFYNANYHSLKYYALVDEKCIYFDTEATNELYDLPMGEKTSGEVL 71
           K +KG +K+ L V++ FY ++ +  +YY ++D K IYF+ EA N+LYDLP   KT  + L
Sbjct: 97  KEVKGTSKIRLKVIRKFYTSDLNQAEYYVIMDGKSIYFNVEAINKLYDLPFDAKTPEQAL 156

Query: 72  IESTLK 78
           I +TLK
Sbjct: 157 ITTTLK 162

BLAST of Chy12G211560 vs. ExPASy TrEMBL
Match: A0A5A7URT6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00140 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.2e-07
Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 0

Query: 12  KFLKGVTKMHLDVVKVFYNANYHSLKYYALVDEKCIYFDTEATNELYDLPMGEKTSGEVL 71
           K +KG +K+ L VV+ FY ++ +  +YY ++D K IYF+ EA N+LYDLP   +T  + L
Sbjct: 54  KEVKGTSKIRLKVVRKFYTSDLNQAEYYVIMDGKSIYFNVEAINKLYDLPFDAETPEQAL 113

Query: 72  IESTLK 78
           I +TLK
Sbjct: 114 ITTTLK 119

BLAST of Chy12G211560 vs. ExPASy TrEMBL
Match: A0A5D3DV25 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold279G00020 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.3e-06
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0

Query: 4   PIKNFGRQKFLKGVTKMHLDVVKVFYNANYHSLKYYALVDEKCIYFDTEATNELYDLPM 63
           PIK FGR+KF KG +K+ L+VV+ FY +++   +YYA++D K IYF+ +A N     P+
Sbjct: 87  PIKAFGRRKFFKGTSKIRLEVVRKFYASDHTQAEYYAIMDGKSIYFNVKAINNCTTCPL 145

BLAST of Chy12G211560 vs. ExPASy TrEMBL
Match: A0A5A7U8H4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00470 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.9e-05
Identity = 28/61 (45.90%), Postives = 37/61 (60.66%), Query Frame = 0

Query: 18 TKMHLDVVKVFYNANYHSLKYYALVDEKCIYFDTEATNELYDLPMGEKTSGEVLIESTLK 77
          TK+ LDVVK FY+A YH    YA ++ + IYF  EA N+LYDLP   +  G  +I    +
Sbjct: 38 TKVRLDVVKKFYDAKYHPTDLYATIESEKIYFHAEAINKLYDLPNDIEYPGHGIITKPTR 97

Query: 78 G 79
          G
Sbjct: 98 G 98

BLAST of Chy12G211560 vs. NCBI nr
Match: KAA0031701.1 (hypothetical protein E6C27_scaffold139G004850 [Cucumis melo var. makuwa] >TYK04411.1 hypothetical protein E5676_scaffold409G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 1.15e-13
Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 0

Query: 8   FGRQKFLKGVTKMHLDVVKVFYNANYHSLKYYALVDEKCIYFDTEATNELYDLPMGEKTS 67
           FG +KF KG +K+ L+VV+ FY ++++  +YYA++DEK  YF+ EA N+LY+ P   +T 
Sbjct: 74  FGWRKFFKGTSKIRLEVVRKFYASDHNQAEYYAIMDEKSAYFNIEAINKLYNFPFDAETP 133

Query: 68  GEVLIESTLK 77
             VLI +TLK
Sbjct: 134 DHVLITATLK 143

BLAST of Chy12G211560 vs. NCBI nr
Match: KAA0050753.1 (hypothetical protein E6C27_scaffold46449G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 65.9 bits (159), Expect = 6.82e-11
Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 0

Query: 12  KFLKGVTKMHLDVVKVFYNANYHSLKYYALVDEKCIYFDTEATNELYDLPMGEKTSGEVL 71
           K +KG +K+ L V++ FY ++ +  +YY ++D K IYF+ EA N+LYDLP   KT  + L
Sbjct: 97  KEVKGTSKIRLKVIRKFYTSDLNQAEYYVIMDGKSIYFNVEAINKLYDLPFDAKTPEQAL 156

Query: 72  IESTLK 77
           I +TLK
Sbjct: 157 ITTTLK 162

BLAST of Chy12G211560 vs. NCBI nr
Match: KAA0057357.1 (hypothetical protein E6C27_scaffold280G002180 [Cucumis melo var. makuwa] >TYK30046.1 hypothetical protein E5676_scaffold216G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 64.7 bits (156), Expect = 8.92e-11
Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 0

Query: 12  KFLKGVTKMHLDVVKVFYNANYHSLKYYALVDEKCIYFDTEATNELYDLPMGEKTSGEVL 71
           K +KG +K+ L VV+ FY ++ +  +YY ++D K IYF+ EA N+LYDLP   +T  + L
Sbjct: 54  KEVKGTSKIRLKVVRKFYTSDLNQAEYYVIMDGKSIYFNVEAINKLYDLPFDAETPEQAL 113

Query: 72  IESTLK 77
           I +TLK
Sbjct: 114 ITTTLK 119

BLAST of Chy12G211560 vs. NCBI nr
Match: KAA0057278.1 (hypothetical protein E6C27_scaffold280G001190 [Cucumis melo var. makuwa] >TYK27637.1 hypothetical protein E5676_scaffold279G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 61.6 bits (148), Expect = 1.28e-09
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0

Query: 4   PIKNFGRQKFLKGVTKMHLDVVKVFYNANYHSLKYYALVDEKCIYFDTEATNELYDLPM 62
           PIK FGR+KF KG +K+ L+VV+ FY +++   +YYA++D K IYF+ +A N     P+
Sbjct: 87  PIKAFGRRKFFKGTSKIRLEVVRKFYASDHTQAEYYAIMDGKSIYFNVKAINNCTTCPL 145

BLAST of Chy12G211560 vs. NCBI nr
Match: KAA0049901.1 (hypothetical protein E6C27_scaffold13G00540 [Cucumis melo var. makuwa] >TYK07644.1 hypothetical protein E5676_scaffold105G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 2.50e-08
Identity = 28/61 (45.90%), Postives = 37/61 (60.66%), Query Frame = 0

Query: 18 TKMHLDVVKVFYNANYHSLKYYALVDEKCIYFDTEATNELYDLPMGEKTSGEVLIESTLK 77
          TK+ LDVVK FY+A YH    YA ++ + IYF  EA N+LYDLP   +  G  +I    +
Sbjct: 38 TKVRLDVVKKFYDAKYHPTDLYATIESEKIYFHAEAINKLYDLPNDIEYPGHGIITKPTR 97

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SQ813.3e-1047.14Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U4E35.2e-0845.45Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7URT61.2e-0745.45Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DV251.3e-0645.76Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U8H41.9e-0545.90Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0031701.11.15e-1347.14hypothetical protein E6C27_scaffold139G004850 [Cucumis melo var. makuwa] >TYK044... [more]
KAA0050753.16.82e-1145.45hypothetical protein E6C27_scaffold46449G00020 [Cucumis melo var. makuwa][more]
KAA0057357.18.92e-1145.45hypothetical protein E6C27_scaffold280G002180 [Cucumis melo var. makuwa] >TYK300... [more]
KAA0057278.11.28e-0945.76hypothetical protein E6C27_scaffold280G001190 [Cucumis melo var. makuwa] >TYK276... [more]
KAA0049901.12.50e-0845.90hypothetical protein E6C27_scaffold13G00540 [Cucumis melo var. makuwa] >TYK07644... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy12G211560.1Chy12G211560.1mRNA