Chy12G210600 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G210600
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH12: 5755235 .. 5755620 (-)
RNA-Seq Expression	Chy12G210600
Synteny	Chy12G210600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGCGCACGCTTCTCCCATCCGACCAAGCCGTTGTCGGATGCCTGTCGAGGATCGGAGTCAGACCCAAGCCGAAGTCGGGAGATCCGAGCCGCGCAACTGCCGCTCCTCTGTTCCGACCTTCCGAAGAAACCCGCTGCGCGCCTCTCTCCTTCCAGTCGTGTTTCCTCTCCTTCCGTCCGACCACGCCGCCTCAAGGACCGAGCCGTGCGTCTTCCGTTCTCCGTTCACCTGAAGACGAAGCCCAGCCAGCCGCGCGCAGTAGTCCGCCGCCGCTGGTATCGTCCGCAAGGCCGCCGGCGTGCACATCTCGCGAAGCCGGACGCGGATCAGAGCCGATCTGCCTCCATTCTGCAAGAGGCCAGCCGTCGTGCGTCTCCTTCCAGCG

mRNA sequence

CCGCGCACGCTTCTCCCATCCGACCAAGCCGTTGTCGGATGCCTGTCGAGGATCGGAGTCAGACCCAAGCCGAAGTCGGGAGATCCGAGCCGCGCAACTGCCGCTCCTCTGTTCCGACCTTCCGAAGAAACCCGCTGCGCGCCTCTCTCCTTCCAGTCGTGTTTCCTCTCCTTCCGTCCGACCACGCCGCCTCAAGGACCGAGCCGTGCGTCTTCCGTTCTCCGTTCACCTGAAGACGAAGCCCAGCCAGCCGCGCGCAGTAGTCCGCCGCCGCTGGTATCGTCCGCAAGGCCGCCGGCGTGCACATCTCGCGAAGCCGGACGCGGATCAGAGCCGATCTGCCTCCATTCTGCAAGAGGCCAGCCGTCGTGCGTCTCCTTCCAGCG

Coding sequence (CDS)

CCGCGCACGCTTCTCCCATCCGACCAAGCCGTTGTCGGATGCCTGTCGAGGATCGGAGTCAGACCCAAGCCGAAGTCGGGAGATCCGAGCCGCGCAACTGCCGCTCCTCTGTTCCGACCTTCCGAAGAAACCCGCTGCGCGCCTCTCTCCTTCCAGTCGTGTTTCCTCTCCTTCCGTCCGACCACGCCGCCTCAAGGACCGAGCCGTGCGTCTTCCGTTCTCCGTTCACCTGAAGACGAAGCCCAGCCAGCCGCGCGCAGTAGTCCGCCGCCGCTGGTATCGTCCGCAAGGCCGCCGGCGTGCACATCTCGCGAAGCCGGACGCGGATCAGAGCCGATCTGCCTCCATTCTGCAAGAGGCCAGCCGTCGTGCGTCTCCTTCCAGCG

Protein sequence

PRTLLPSDQAVVGCLSRIGVRPKPKSGDPSRATAAPLFRPSEETRCAPLSFQSCFLSFRPTTPPQGPSRASSVLRSPEDEAQPAARSSPPPLVSSARPPACTSREAGRGSEPICLHSARGQPSCVSFQX

Homology

The following BLAST results are available for this feature:

BLAST of Chy12G210600 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G210600 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G210600 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G210600 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G210600.1	Chy12G210600.1	mRNA