Chy12G210360 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G210360
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	twinkle homolog protein, chloroplastic/mitochondrial isoform X1
Location	chrH12: 5292178 .. 5307964 (-)
RNA-Seq Expression	Chy12G210360
Synteny	Chy12G210360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCTTTGCCGATGGTCGGTCATCATATAAAGATTTAGGACAAGTTGCACTTAAGCAGAACATACGGAAAATTACAGTGGAGAGTCTACAACTTGAACCACTGTGCGATCAGGTTGTTGATTTTATATTTTTCTTCCTTTTGATGATAATTATTGCTTTCCGGTCTGTGTGAAAGCATATATGTATGTTATTGTGTAGTTTTCCAAATATGTTATTTGTAGGTGATCATCAATTCATTTTCCTTTATTAATCCTACATTTTGTTCTATTAGGAATACTTATTTTTCTTGTAATTAAGAATTTAAAATTATCCCAAAAGTGCATTAAAACCTGTTAAAACACATTAAAAATGGGTATACTTTCATTTTTATTTTTAGGGATTTTTTTAACAACTTTATAATTTATTTTTTTGCCTATAAGTTTGGAGTGGTAAGTTTAACTAAGAATAAATTATTGAATCGTATAAGTTATTTTCTTTAAACAAATGAAATTTATTTTAAGCATTTAGTATAATTTTGTCAACTAAGCTTGAATATAAATATTTTCTTTTCATATGCAATTCAATTGCTCTTATAATTGTGGAACATAGAGAAAATAATTATGTTTCTTGTTTCAGCTGGTTGATTATTTCGCCGAGCGATTGATATCCAAGCAAACATTGTTAAGAAATTCTGTTATGCAGAAAAGATCCAATAATCAGGTAAAAGGAGTTATTGTTGAATTGAAGTAGCCATGGAGCATTGGCCTTTAGATGATAATCTCTTAGGGGCCGTTTGGTTTGAGATTTTTCTACATGAGAATTGGCACAAACATGTAAAACTCATGTTTGTTTCATAATTTTCGAACTTTTGCCTGGGAATAACTGATTCCCAGACATCATTATTTACCACAAACCAGGGTTTTTTATTCCGTTCCAAAACAGTGAGTTTCTTCCTCTTTTCCCCCTCTATTTTTATTTTATTTATAATTTCATTTGAAATACAGTTAATTAATTAATACTAACTTTAAAAAATTAATATAAAGTATTTATTTTAATAACTTAGTAACAGTCTAATAAAATATTTACCTAACTTATTTTACAATAAAAAAGTTCTTTAATAAATACAGTTATTTCTTTACACAAATTATTAATTAATTAGCTAACAATATATTAAATATATTTAATTGATAAACTAAGATTAATTAAATTTAGTAAGCACAAAAATTTATTTTTCAATAATAATAATTGATTACTTTATTGTTTTTTCAATAATCAAGCCATTATTTCTTGAGATTTGTTTTAATTTATATTACTTCATTCATTAAAAACATATAATATTTATAAAATATTTTTTAGCATTCTTTATTGATATATCATACTCCTATCTCATTTTTTCATTTTTTTTATTTAATATATTGAATAAAAATATTTTTTCTTATTGTATTTAAAATTGAAATTACTTACGATAGACTTAATTAATTATAATGATTAAATATTAGATTATAATTAATATTACGTTTGTTAAATATATCAATAGGTTAATTTTAGTTATCAATTTATTTAAAAAAATTAATTATAAATTACTCAATTTTCAAGTATTTATAGTTAAAATTATTATTGATTACAAATTAATCAAATTTTATCAATGTATTTTTTAATTAATTAATCTATTAAATTTATATGAGACTTTTCTGCTTAATTTCATAAAATAAATTCAAACATATTTTTTGTCTATAAAATTCTGATAGCATTTCCCATGCTCAACCAAACACTGTCATCTTATTCCCAGGTATTCCATTCCCAGGCATCTATGGAACCTTAAACCAAACGACTCCTTAATGCCATTAAAGCATGCTAAAGTGCATTTCAAATCTGTATTGATAAATTGTGCTTCATTAACTGTGGAAGAATGTTTCAATTTCATAAGTTGCAGTTGGATCTTTTGTAATATTTTGTTGTCTATATAGCTGCCTTGAATTATTATTATTTTTTTAATAAAAAGAAACAAAACTATTCATTGAGTGAAAATAAGTATTCTTAATATTCTGCCATTGAATTAGATAAGAAATATCGGGAATGTATTGCATTTTGAATCTTCGAAAGGGAAAACTACAAAGGAAAAAGGGGAAACTAGGAAACAAGTTTACCTTTGACTTCTCTCTCTCTCTCTCTCTCTCTTGTCGATTAAGGGGCACGGTTTCTGTAAAGTTACAAGTTTGACCTTTTTAATGATTCGTTGTGATGGACCTCATCATCTTAGTTGCTCTCGTCTTCTGCTTATTTTGTGCATTTGGGGGGTGGGGAGGGGCAGATCTCAAAGGGAAATTAAACATTCATGTCCGAAACTTGAAAACTCTGGTTATTTTGGTGATATTGAAGCCATAACTTTTGCTTTATATAAATTTTAATATGCTTACGGGAGTAAAATTTTACCATGATTTGCTTCTTCTGATTGCTTGCACTTGTTTCTACAGATTGCTGTTGCATTTACGTATTATCGAGGTGGAGCATTAATTAGTTGCAAGTATCGTGATGCCAACAAAAAGTTCTGGCAGGTTCTTGGTTCAACTTATAAATAAAACTGTATGATAAATTTTTACTTATCCTAATCCTAAAAGCTTAAAATATATGCTTAGAGTAAATTCAGTTCATCTTAAATCATTTTGATTTTACCTTCTTCCCACTAGAAAAGTGTGCCATCTGCTTTACTTGTATAATGTTATTGTAAGAATTAATATATATAATCATCATTTGATTGTCTACCATTCCTTTATTTCAGGAGCCCAATACTGAGAGAATATTTTATGGAATCGATGACATAGATGGCACAAGTGATATCATCATAGTATGAATTATTCAGTATGGAAAATCACTCCACTTAGATATATTACTCATAATTTTCCTTTGTAATATAGGTTGAAGGGGAGATAGACAAGCTCTCAATGGCAGAAGCTGGTATCCATAATTGCGTGAGTGTTCCTGATGGTGCACCAGCATCAATTTCCGAAAAGGACGTACCTCCTGCAGACAAGGTTACTCTCAGGACCTTGAATTTTTTTAAGCCTTAACCTTAGCTATCAGATTTGTTTATAACCAAGATTTGGTAGTCTTTTCTTCATTCACACTCCACCTGATTCATTTCTCAAATTCTGTACTTATTGAGTAACAGACTTTGTCTTCTTTCTGCAGAATACATGTTTTTTTTCGTCTCAATTTCTATTTTAATTTCATGTTCTCTCGCATCCACATCAAGTAACTGAAGTTGTCTTCACTCGACACTCTGCAGATTAAAATATGTCTAACTAGACGTTTTACAGAACTGGCGTATATGGCTAGCTAGAAGATCTTCCTTGATGAAGTTATTTAATTAGCATTAGTGAAGGATTTCATTATATTTTTTTAAAAAAACTGACTAGCAAATCACTTTCATCGGGAGAAATAATAATACAAAAGTAAACAGGCTGTATAAACATTTATGCACATATAATTTACAAGGGGCTATGTGAAGATGAACATTCTGCTGAAAGGCCTCATATTTGTTGAAATTTTCATGTTATGTTAGTTCCTTGTTAGTGACGGTTAGTTTGAGATGTACTATGTCTTATCTTGTTTTTTGTTTTTGGATAAGTATTCTTGTCTTATTGCCCATTCTAGCTCTTTCTCCCATTTTACAGCCATGTGGTTAATGTTGTGTGTTTAATTTGCCTGCATACCATTCTGTTAAATAGCCTCACTCCTTTTCTAAAATGATGAGGGAAGGTTTATCTTTGTGGGATAAAAAATGAGTGGTTACTGTGGACAGGTATGCTTAAAAGAAAAATTCCTGTATCGTTCTCTTTTGGCCAAAAACTATGGTTTCAGTCCATTTGTAATATCTAATCATGTGCATTGTTATTCATTTGAAAATATTCATCCTGTGCACAAGAAAACATTGTCATAAGATTATAAAAAATTGACTTTTTATTGCTTATTATTTGGTTTGGTTGATGTAAATTTATTTTAGTCTGATTGAAATGAATATTTCTTGTGAAGCTAGGATAAGAAGTATCAGTTTCTATGGAACTGCAAAGACTACTTGAATAAGGTTGGCAGATATAATCCCATTTCTTTTAAGCATGAAAGCAAAGTAGGCCATTGGAAACTGCTTAACTTATTGAAATTGATAGGCCTCACGCATTATACTTGCTACTGATGGGGATACTCCTGGTCAAGCTTTAGCAGAGGAGATTGCACGCCGTGTTGGGAGGGAAAGGTTTTCTTTTATCATTTTTCTTATTGCAATCCATTATTTTGCTGGGTTAGATGCGGAATAGTTTTGCTAGTAACAGACATTTTCATTTTCCATTTTTAGATGTTGGAGGGTCAAATGGCCAAAAAAGAATGAGGTCGATCATTTCAAAGATGCAAACGAGGTTGGAATTACTGATCAATTATCGTTTTGCTGTACTTTTATTTATTTATATTTAATAAATAAAATTAACCTTCTCAGGATGTCTATATTTTCTTTCTCATGACAAAGTTAATGTTTATTATATGTAATGCTTTGATGGGAAATGTTGTAGGTATTTCTGCTATTTTTTTTCCTTTGGATAGACAAAGCTTGCTTTAGGCAATGAATCTAAGGGTGCGTTTGACACACAAAGTTGAGTTGATAATAATTGTTTTTTGGTAATAACTGACTGTGTTTGAGGTGCAAAGTTGAGTTGGTAATAATTGTATTTATGCAAGTGGCTGCTGCTAAAAGCTAGAAAAACTAAATTTGTTAATATTACCAATAAATGATTGTCAATGTTTGCATGGAATGGGATCACTTCTCTTCTAAATTGTGTTTAGGTTTTGATGTACTTGGGCCCTGAGGCCCTGAAGGAAGTTGTTGACAACGCAGAGTTGTATCCTATAAGTGGATTATTTCGCTTCAAAGATTACTTCCACGAGATTGATGCATATTATCACAAAAAATTTGGAAATGAGTTTGGTGTCCCGACTGGATGGAGGTGTCTCAATGATTTGTACAATGTGAGTTCAAACTAGCAAACTCATTCTTTGGAAATATTGATTCTTATTTGAGCTACCGAATGCATTGTTATCAGGTAATGAGATATGTTGTATAGAAGTTTTAACAAAGAAACAAAAAATACAAAAAAAGAAAAAAATTTGATAAATAAGATTTATCCTGTAAAGGCAAAATAGCTTATGAAAGAGAACATCATCTAATATTTATCATCGAAAGAGAACACTATCTACATGAAAATATATTGATTTTCGACTCAAGAGTAGCGACTCTTTTCTAATTCATTGAGGGGCCGTTTGGTTCAAGGTTTTAGAAATGCCTGGAAATTAGAGATGTCTGAAAAAAGAATGTCTTGGAATGGAATGTCTAGAAATTATAGATAATTGTGTTTGGTTGTGCATGAGAATACTATCAATTTTTCCTAGAAATAAGTAATGTAGAGTTTTGGTATTGCATGATAATATTATCATATTTTGCAGAAATGAATGATATTTTTATTTAAGTTGTGTGATAATTTTTAATAATTTTATGCAATAATAAAATATTAAATTCAAGCAAGTTAATTTACACAATTAATTTGCTCTATAGTTATTTTCTAGAAAATTAGTTGTTAGTTATTTTATTATTTTAAGTCGATATTCTGAAATCATTTTAGATAATATGATTTAATTTTCATTCATAGAAGAAAAAAACAAGTAAAAAATATTATTATAATGATAGAAAATACAAAATAAAAGGACAAAAATCGAAAGTATAAGAAAATAAATATGCTAAGAAAAAATAGAGTAAGATTAAACAAGTAAAAAATATAGAAGAAACATGAAAAATGATTAAAAAAGGTTGAAATAGATAAAGAAGTAAAGAGAAAATTTATAAATTAAAAATATATATATATATAGGGGGAAGGAAAGAGGAAATCTCACACAAACCCATTGGATTAAAAGTCCTGCATTGACAGGCATATACGATGCCTGGGACAGACATTTTCCCAGACAAATAACTCAAAACCTCTCACTAAACATGGGTTTACAAAACACATTCACATTCTCACCCAATATTCCCTCATACCAAACGACCCATGAGAGGAATCCACAAATTTCTCAGGACATTTACAAAAACAATAAAAAATTTCATCTGTGCAATATTTAAACTCCATTTTATTCCTATTTGAACTTGGATTTTCATCTTTGCAACTAGAAAAGCGTTTCTTTAAACCCACAAAATTTTTTGCAAAAGTTAATACTACTGGCTAACGTTTCTACTATTTCCAGATCTTCACTTTTTCCTGGATGATGTTATTATTTCTCTGGTTAGGGATGATTTTGACTTTTTAGCCATGACTGGAAACTTATCAGAGCTTATGCAGAATGATTTTGCTGTGAATGGAAGATTATTCCCGTTGCATTTGGACATCTGGAAGTTAATAGAGTTGCATTACTTGAGCAATGAAAAGAGACTAATGTGCTTAGGATATAAATTGACGAGGAAGTGAATGAAAAGTGAATAACAAAACTACAACAAAAAAATTAAAATTGAGACACATTGAAAATAATATCCAGTAATTTAATGGAATGAAGGTAATTGGTTTGTTTTTTTGTGTATTGTTACCTATTGTAGGAGGCGATCCTTTTTTATGTTGAAATATGAAAACATACAAAAAAAATTTCGGCAAAATATTTTTTAGATTTTATTATTGCTAATGCGTTTATTTAAAACAGGTTGTCCCAGGGGAGCTTACCATTGTGACTGGTGTTCCTAATTCAGGCAAAAGTGAGTGGATTGATGCTCTGCTATGCAATCTTAATGCAAGTGTTGGTTGGAAATTTGCTCTCTGCTCTATGGAAAATAAGGTAAGCTGTTCAAACTTCTGAGCTACCGAACGGTTGAAACATTATGGTCCTTATCTTAACCTTGTTGGCTATTCTAAAAGAAGAATTTCGTTTGATGTGAAAAATCTCAGCATAATGCTTGATGATCTTTTCAGATGGCTTGTAGACTTATGGCTGTTGGTCGCTTCTTTAGATGTTGCTTTTTGGATGTTTCTCTTATGACTTCCATATCTGTATTTCATTGTAGTACCAAAATTAATTTTGGTCTTGAAACAATTAATTTTTTATAACATTTTATGCTTACCAGTACCAAGCAAACAATTTTTTCTAGTTATTTCTGACACGTGGTAGGTTGCTTTCTGAGTATACTTTGGTAATGTTTTCTTAGTGTGTGAATTATTGCCTTTAAAATGAAACATTGTTTCTCTTGCTCAAGTTAAATTGATAGTCTGACGAATATAACTTCTCCTTTCTCTTTCCAGAATTCATTTTGCCATCTTTCGATGTTAGGTTATTGGGATAACCTCTGGAAGCATTAGTTTAGGAAGCATGGTAGGAGAATGTGCATGCAGTAAGTTATATGCATATGTATATGAACCAGCCTACAATATGAAAGAACTAAACATAAACTGATAATAGAAGAGAGTAAAGGGGAACAAGTTTTGGAAGATAATCTTATAATTTTTAATACTTGGTGATTAGTATAGTGTCACTGTTTCCATGATCAGCTGGAGACCCTTTTTGTGACCCCACATTCCTTTGTACTTTCTCTGTCTGAATGAGATTCATTTATTTTATATGACATAACTTTTGTCTCAAACGTAGAAAAAAAATATTTATACCCAATAATTAAGGACATCGGACAGATGTTATTTCTTAATTTTTCTTCCTTTTTGTACGCTGTTTTAATTTAAATTTATTTTGATGAATTATGATTAGGTTCGAGAACATGGTAGAAAACTATTGGAGAAACACATCAAGAAGCCTTTCTTTGTTGGACGGTAAGGCTTAGATTGTAATTTTTGTTCTCTCACTACCTTTGATCCTATAACCATCATTATGAACCCTACGATTTTGAGTTCAAAGTGGTAGAGTACGGAGTACCTTTATGCTACAGTCTATTAAGATTCAATACTTTGTTGCTCCAATTAGATAGAAATGACAAAGATAAAAAGAGAGCCTCCTACCTGAAATGATATGAACCAGGCCATCTTATTCATGTGCTGAAGATTACAATAAAATAAAATGAAGCAGGAATTAAACGAACTAAACTGCATCTCAAGCTTCAATTTGTGCAATTCAAGCATCAAATTCAAGAAACTATCCTTACTTCAATTGAACATTCATTTACACATGGAATTTTACACAAACTTTCGGGGCTTACCAAAAAACTTAAGTTTTTGAATTTATGATGTCTATTAATTGTATCTTCAGTTTTAAGTGTTTTTGTTTGTTTTTTTTATCATGGCTGATTATGGTTGTTACAACTCTTGAAATGCCTCATTGAACGTCTAGGGTTTTATTTTGAGGTTATATAAAGCCATAAAATTCATATTGAGAGAAAAGCTCCGGAAATATGTATTGAAAGAGCCTTTGAGCTTTCTTTTAGCCTAGAACTAAGTTTATTTGCAATTTTATGACTTTTATGTTGCATGTTTAGAATCATTCAAGCTTGACTTGATCGATCTTGGTTGTGGAGTGATTCAAAGATGAAGGGTTGGTGGGAGCTACAAGCTTTGTTTAATCCCTTGTTTGTTTGATTATCTAAGTAATGTGTAATCTAGCCTATTTTAGGGGTTGATTCCATATATTTTTTTTAGGGTTTTTGAGTATTAGATCTAAAAGTATTTTTTTCAACAAGGTTGTTAGATTCTATTCTCGGAAGTTACTTATCATGAAATATTATTATCACAAATTTATTGTGAGTAGATTTAATAGTCAAGAATCCTATTGAAGAGAGCTCCAATCTGGATGTCGAGGGCTAGTGGGTACAAAAGTCTATGTTGTTTTTCACACCATACAACAAATAGAAAGAAAAAAGAAAAAAGGGGGGTGGGTGGTACAAAGTCCCCCCAATGATAAGAAACTGACTCTAAAAACCGAAAAAGAAAACAGCTTGAAATCGAGTGAGCATACATCATAGTTCATTCTGATAACTCTATAAGGTCTAACTCAAATCCTCATAGGCTTATGTAAAAGTTAATACTCACAGTACGTATAGAATTAAGTGTGACTGAGGCTGCAAAGATTTCACAGTGCAAGTGGCCAATTTCTCACTCATTTTAGCATTCAAAATCTGTCCATTTGGCAAAGTTTCAAATAAACTATGCCCTCAAATTTAAAATACTCCCCAGACCATTTCCTTGAACTAATGACTATAATGAGCACCTCGATCAACTGGTTGTTGAATTGAGCTCTTGTAGTGTGGGTTTCATAGTCTAATTAAGTATTGCTATTATGTCTGTGTGGGCATGTCTTATAGACCAAGAAACATGTTATATTGTATCTGTATTTAGTATCCAGCACGTTATGTTCTTCCTTTAGCCTTCCTTGGGCGTGGGTTATCTCTATCCCGGTCCCTAGGTTGTTCTTTAACCTTCTCTATCAAAAGTTGTACAATGATCTTCGATTTATATTCTCATTGGCCTTCGTGGACTCTTAGGGGCCGCTTGGGCCAAAAATTATCTAGGACTATAATAACTACCTCTTTCTACAATAAATACTATTTAATAAATACTATTTAAAAATCTCCAATTAGCTATAGTGAAGACTATTTCAAAACTTTTAATTTGTTACCGTTTTTACTATTTGACATTTATAATTTTTTTATGCTTTGCTACAGTGTTTGCTATTACGTTATCAAGTAAAATAGTCTACACACGAAAAAATAGTCTACACTCCAAACACAAACTATTATAATCAAACTATAATAACCTAGAACTATAATAACTCACAGCTTGCCCCAAACACCCCCTTAGTGTCAAGGAAGGACAATCATTGGAAGAAGAAAGACACTGTTCCTCCTTGTTTTGTACTAGTAATACCAAAAATATATCTTAAGTGATTAGGCGAGGACAATTTGAAGTTGCAGTTTTCCGGTCATGGTCTGGAACCAGTGCTTAGTATTCTAGGCCAACCCCCTTATAGGTTGCAGTATGTAATTGTTTCATGAGAATGTTATAGGTTGGACTGTTGGAGTGTCAAAGTACATTATTTGCAGTATTTGCATATAAATGAGGAGGGCTTGTTGGGGAGATTGTTCAAACCAATATCTTCTTTAGATTTAAAAGTTCAGCGAAAGCTCTCTCCTATTTTTGTTTTAGTTTGTTTCCGAACACTTGTGAATAATGGCTTGAGTCAAACGATGATCTTAAATTTTACAAACTTTCTCATCCTAATGGTTTGGAAAAATTTTCTCAATGAAGTTTTCGTTTAATTTGGAAAACAAAAATTATAAATATTTTGAAGATAGTCTTCAAATTAACCCACAATCATTTTCTCCCCCTCAATATTTCTGCAATAATATCATTTTGTCTCTCTTTGCCATCTCTAGTTATGGTGGTTCTGTTGAACGATTGAGTAATGAGGAGTTGGAGCAAGGCAAGCAATGGTTAGACGATACATTTTTTCTTTTAAGGTAAATTGAAAAGTCCTTGTATTATCTTGTTGGTTATTTTTAATATTCATATATTACTACCAGCAGTGCACATCTTAAGTTACAAGTACATCGCAAGTTTGTGTAAAGACTAATTTTAAGTTCGTAAAATAAAAGATATATATCAGTCGTTGAATTTTTATAGTATCTGTTTAACATTCTAGTTCTACATTATTATTTGTTTTAAATACAGTTAGCAGTTATTAGTTCTCTGATATGTCAAAGAGTGCAACAAGGCTTGAAGAAAATGTCCTTGGCATGATCAGATCTTGATTTTGTGCTTTACTTGTAATTTTTTCAGGAACTTTTTTATAACATTCGATGCAATTCCAACCCAAAGTAATGTCGTGTACTAAATAGTAAATACCGATTTTTTGTTGATATGCTTAAAATTTCCTTCAATATTTGCTTTGATGGGCAAACTTCCTTCAATGCAAAAGTTACCAAGATCAGAACAAGGAGAAAAGTTGATAAAGGTCCAAACAAAGCTCTCTGATGACGGTTGTACCTTCTTGCATGTTATACTTAACTCTCTAAATGACCAAGTGCACTACAAATGGACGTTTTTACTAAATTGATTTTTATGCCATTTTAATCACAATAATTTTGTTTTGTTTCCTTCTTTCATCTTTACCTCCTATAAACCTTTTGATGTGCCTTTGAAAGTGTCATTTCTCTTTTTAACCTGACTAGGTCTGAAAAGGATTCCCTCCCAAGTATTAGTTGGGTCTTGGATCTTGCAAAAGCAGCAGTTTTAAGGCATGGAGTTTCTGGACTGGTAATTGATCCTTATAATGAGCTTGACCATCAACGGCTTCCAAATCAGTGAGTTTTATCATTATGTTGTTCTTTGAAGATGCAGTAACCATGATATCTCCTGTAGTTTTCAACCACCGACTGATGGCTATGTTTCTTTGATCTCAGTGATAATTTTTTTAATTTTCCTGTTATTTATTTATTCATTTTTGGGTTGTTATGATCCCTTGTATTCCTGAAAAGATTTTGCATCCTTTTATTCCCTTGGTAGAGTGTTTTGTCTCAGATGTAATGAGAAAAAAACTTGCTGATAATTTAACTTTGTAAGCTCCGAAGGAGCAGTTCCAACATTTGTCATTAACTTTCATAGTTCACTAATTGGCCTCGAATTAAATAACTCTACTACACAGTGAAATCCCTATCCAAATTTTTAATAGCTCCACCACCCTAGAGAAATTCATATTTCAATCCCTTTGGAAGTCCAAAAGTCCCAAAAGAATCAAAATTCTAACATGGATTATGCTCTTCAGATCCCTAAACTGCTCAACCACTTTTAAGCAAAGGTAAAAGACCTTTCCTTTTCTGCTTCAGTCTGTCCACTTTGCTGTGCTTCTGCAGAGGATCTTCAACACTTATTCTTTGAATGCTCATTCTCTAGAATTGCTGGTGGAAGCTATTGTCTTATTTCAACCTTAAATGGGCTTTCGAACCATCCTTCAGAGCTGATGTATATTAGGTGATTGGCAGTCCAAATTTATCATCTAAACCGCAAATTCTTTGGTCAAATGCGGTCAAAGCCATCCTCTCATAACTATGGTTTGAGCGACATCAAAGAGTTTTTCATGACAAATCTTTTGGCTGGTCGGATCGATTTGCCTCTGCTCGTTTGTTAGGCTTCTCGTGGTGCTCTTCCTCAAAATTGTTTCCTGATTACACCATCCAAGACATCTCTCTTAATTGGAACGTGTTTATTTCCCCTGTTTAATATCTTTATGTTTTAATACCTTAATTAGATTGTGGCTTCTTGTACTGTTTTCCAGGTGTTCAAAAATGGAACTTTGTATTATTAGAACTCCCTTGTATCCAATATTGAGCATTGTCTCGACTACTATGTAAATATATTTGTTTCCTTTTCAAAAAATTTAAAAAATTCAAGAGCACTGCAAACATAAACGAGACCTGTGAATTGTTTGAATTATATAGGCAGATTGAGTTGTTGACATAACATGTTTTATTAATCAATTCCATATAGCGTGTAATCAACTTTTACTTCATTAATCAACTCCATACAGCATGTACTTTTTATTTGTTTGACAGTCTCGTTTGAAACTCTTCAGTTAGACTACTGTACCTTGAGCTTTATCTCTCTATTTTTCTATATATTAATGATAGTGAGATTCATATCCTTTTCAAAAAAGAAACTCTTCAGCTCTACGACTTGCTTATTTTTCCTATGCTCTTAAAAAGGATGGTAAAATTTTCGGGTCTCTTCCAAAATCCAAGCATTATTGTGTTATGTATGATACATAGATATCAACTTTGTAGGTTCAAAAAATTCATTTATTTCTTTTCCTGGCTTGCTTGCAGAAAGTTATAAACTACAAAATTTGACCTTTGCTTTTCGCCTTTTGTTTTTATTGTACAGTTAACTAGAAGTTTGAAGTTTTTTTGTGACAGAACTGAAACAGAGTATGTGAGCCAGATGCTTACTAAGGTCAAACGGTTTGCTCAACATCATGCTTGCCATGTTTGGTTTGTTGCACATCCCAGGCAGGTTAGTTTTTGAACCGTTAATTTTCTTTTTTGTTTGATAAAATACTTTATCAAGGGAGAAAAGAAATACAAGGAGATATTTATAGTTAAAAAAAGGGCACACAGAAGGGAGCACTGTAAAGAAAGGTTTTCAAATCAGGCAAATTATAATCAAACGAATAAACAAAGGGTTTTGACAATTTTCCATGAATGCCCAAGGAGAGACATTAAAACTTACCAAGGATAGTTACTTCCTGGAAAGCTTCCTAGGAAGAGAATGGTCCACAAAAAAGAGGTTAGTAGAAGAACATCACTTGTGGGGCCTAGGAAGAGAAGATTCCTTGATTTAAGGGAAATTCCAAGCAAGTAATGCCAATTAGTCCTATAAATGTGAGATAAGCTCCTAAATTTGCTTAGGTCTTAACCAAAATCAAATCCAATTATTCGGTTCTACAATGATTGACAAATATTGACTTGAAAAAAAGAAAAATTTGGAACTCAAATATCTTTGCCACCCAAAGTAAAAACCAATGCCGGTCTTTGTTTTACTTCTTTTCTTGAGTTCTTATGTTGCATATTTGTGACATCTGTCACATTGATGTCAGTCTTTCTTGTATCTCTTTTGTTTTGTTTTTTTGTTTTTTTTTTCTGGCTTCTTATTCTTTCTCAAATTTTCTTGCTGTATACAGTTGCAGAACTGGTCTGGAAGTCCACCTAATATGTATGATATAAGTGGAAGTGCACACTTCATAAACAAATGTGATAATGGAATTGTTATTCATCGTAATAGGGACCCTGAAAATGGTCCTATTGATCTCGTACAGGTAGTACAATTGTGGATATATCATAAAAACAATATGTTTCTTTGATTTCTGTGTACTTAGTTTTCTTTCTATCCTTGCTACTTGTAGGTATGTGTACGGAAAGTGAGAAATAAGGTTGCAGGAACAATTGGAGAAGCTTATTTGGAATATAATAGGTATGTGAAGATCTTTTTCCAAAGTTTTTCAGGAATTCACATCTTGTTTCTGACTTGTGGTGATGAATTGTTGTATATGCTTTCTTGAAATTAAGGATGTTGAACAATGAACATCATAAAAATCCTTAATGATAAGAGTTTTATGGAAAAAGAATTAGGTAGCAACATTTTCTCAGTCTTTTGAACAATGTATTTGAAAGCAAACCGTTTCTTTTATTTTTGATAGCTACGATACACTGGTTATTCATTTTGGTTTTGCACACTTAGTGTACTTTGGAGTCTGGCCAATTTCTTTTTGAAGGATCTGCAGACGGGATTCATTGCTTAAGCCTTGGTGTTTAAAGTATTCTCTTGAAGTTTTGATCAATCATCAGCCTAGGCAACAAGGACTTCATACTGATACACATGGCACACTGAAATCAACAAACATAAAATCATTCAGAAAAAGTACCCCACAGTAGCCCTCTCTTCTCGTTGGTGCATTATATGCAAGATGTCAAGTAATGGGTACAGTTTTTCCTCACATTCCCGTTTGGTGACAGTTATTGGTCCACAGTCTGAAAAGGACTATCCTTTAATTTAATTGGAGCATGGCTCCCCTAGCCATCCTTTCAAAGAAGTGTGGGAGCATCCTTGGCTTCACATTAATAAAGGACTCTTGGTAACCATGGATCGAAAGGTACCCACCCTTCAGAAATTGTTTGATGAGATGTGTTGCACATACTAAAACAGTTTCTTTACCAGAATCTGAGGGGTCTTTGCCTTGAGTAAATTTGCCAAAAAGCTTATGGAGCTTTTGTTGAACTTGGAAGTGCATCCAGTCTGTCAGTTATAGAGATTCTTTGTGAACAGCGGCCTTAAAGCGTTGCTGCTAATAGTATTCTGTTAGTCCTTAAGGGTTGGATAGTCGAGTTTACAACTTGCACCAGTAAAATGTCTTGGATTTCAATCTTCGAAACTAGTCTTCCTTCTAAGATTGATTGTTGTCTTTTAGAGTTAGACTTTGAGACGATTGTGGGCAAAAGCCACCCCTTTTGCCATCAACAGAACATGGGATTTCTTACATAACTCTGAATAATTCATGTAGTCACTAGTCAGAATGTTAAGGACTCGTTAGAGGGATTAAGGAACAGGGAATATCCCTCTAATCTTTGGGAATGCAACTGGATCCCCTTTTTTATTGAATTATTGAGTTCGGATGCAACCTTAGCCAGATCATTTGCTGCAAGGGTTGATTGACTGAATGTTGATCCCTTGGTAGTCGAAATACTGACAGTGAGGCCATCTGGAGGATATCAGCTACCCAATAGGTTCTTTTAATACGTATCTGTGTTTCTATTTTCAGGAAACTCAACCTTAATGGTGCTCAAAGAACAAAACATAAATTCTTTCTAAATCTACCTAGATGTTTGGTTTGTGAGAAACACAGACCATTTTTGCTTTCATTATTAGCCCAATGATTGCGAGGTAAATGATTGACAATCATTACCTGTGGATCTTTTGTACAATTCTAGTGTTTTCTGGAGTGATGTATCTAACCACAAGAGGATTTTTTACTTATTATGCTTAAATTCCAATTGTTTTAATGTTCTAAAAATGAATTCTTTCTTATGTTGTCATCGAGTGGCATGCAAATTGCAATACGCTTCCTCTATTCTCTGTTTATCAGCATGTCACTTTATCAATGTACTTTTATTTGAAACCCTTTGTTACCTGTATATTCGCTATTAAAAGATCGATAATGGCTGTGTCAATGTGCTCATCAGGGTAACCGGAGAATTCTTGGATGCTGCTGTAGATGTGAAACTTAAGAAACCATCATCTTGA

mRNA sequence

GCCTTTGCCGATGGTCGGTCATCATATAAAGATTTAGGACAAGTTGCACTTAAGCAGAACATACGGAAAATTACAGTGGAGAGTCTACAACTTGAACCACTGTGCGATCAGCTGGTTGATTATTTCGCCGAGCGATTGATATCCAAGCAAACATTGTTAAGAAATTCTGTTATGCAGAAAAGATCCAATAATCAGATTGCTGTTGCATTTACGTATTATCGAGGTGGAGCATTAATTAGTTGCAAGTATCGTGATGCCAACAAAAAGTTCTGGCAGGAGCCCAATACTGAGAGAATATTTTATGGAATCGATGACATAGATGGCACAAGTGATATCATCATAGTTGAAGGGGAGATAGACAAGCTCTCAATGGCAGAAGCTGGTATCCATAATTGCGTGAGTGTTCCTGATGGTGCACCAGCATCAATTTCCGAAAAGGACGTACCTCCTGCAGACAAGGATAAGAAGTATCAGTTTCTATGGAACTGCAAAGACTACTTGAATAAGGCCTCACGCATTATACTTGCTACTGATGGGGATACTCCTGGTCAAGCTTTAGCAGAGGAGATTGCACGCCGTGTTGGGAGGGAAAGATGTTGGAGGGTCAAATGGCCAAAAAAGAATGAGGTCGATCATTTCAAAGATGCAAACGAGGTTTTGATGTACTTGGGCCCTGAGGCCCTGAAGGAAGTTGTTGACAACGCAGAGTTGTATCCTATAAGTGGATTATTTCGCTTCAAAGATTACTTCCACGAGATTGATGCATATTATCACAAAAAATTTGGAAATGAGTTTGGTGTCCCGACTGGATGGAGGTGTCTCAATGATTTGTACAATGTTGTCCCAGGGGAGCTTACCATTGTGACTGGTGTTCCTAATTCAGGCAAAAGTGAGTGGATTGATGCTCTGCTATGCAATCTTAATGCAAGTGTTGGTTGGAAATTTGCTCTCTGCTCTATGGAAAATAAGGTTCGAGAACATGGTAGAAAACTATTGGAGAAACACATCAAGAAGCCTTTCTTTGTTGGACGTTATGGTGGTTCTGTTGAACGATTGAGTAATGAGGAGTTGGAGCAAGGCAAGCAATGGTTAGACGATACATTTTTTCTTTTAAGGTCTGAAAAGGATTCCCTCCCAAGTATTAGTTGGGTCTTGGATCTTGCAAAAGCAGCAGTTTTAAGGCATGGAGTTTCTGGACTGGTAATTGATCCTTATAATGAGCTTGACCATCAACGGCTTCCAAATCAAACTGAAACAGAGTATGTGAGCCAGATGCTTACTAAGGTCAAACGGTTTGCTCAACATCATGCTTGCCATGTTTGGTTTGTTGCACATCCCAGGCAGTTGCAGAACTGGTCTGGAAGTCCACCTAATATGTATGATATAAGTGGAAGTGCACACTTCATAAACAAATGTGATAATGGAATTGTTATTCATCGTAATAGGGACCCTGAAAATGGTCCTATTGATCTCGTACAGGTATGTGTACGGAAAGTGAGAAATAAGGTTGCAGGAACAATTGGAGAAGCTTATTTGGAATATAATAGGGTAACCGGAGAATTCTTGGATGCTGCTGTAGATGTGAAACTTAAGAAACCATCATCTTGA

Coding sequence (CDS)

GCCTTTGCCGATGGTCGGTCATCATATAAAGATTTAGGACAAGTTGCACTTAAGCAGAACATACGGAAAATTACAGTGGAGAGTCTACAACTTGAACCACTGTGCGATCAGCTGGTTGATTATTTCGCCGAGCGATTGATATCCAAGCAAACATTGTTAAGAAATTCTGTTATGCAGAAAAGATCCAATAATCAGATTGCTGTTGCATTTACGTATTATCGAGGTGGAGCATTAATTAGTTGCAAGTATCGTGATGCCAACAAAAAGTTCTGGCAGGAGCCCAATACTGAGAGAATATTTTATGGAATCGATGACATAGATGGCACAAGTGATATCATCATAGTTGAAGGGGAGATAGACAAGCTCTCAATGGCAGAAGCTGGTATCCATAATTGCGTGAGTGTTCCTGATGGTGCACCAGCATCAATTTCCGAAAAGGACGTACCTCCTGCAGACAAGGATAAGAAGTATCAGTTTCTATGGAACTGCAAAGACTACTTGAATAAGGCCTCACGCATTATACTTGCTACTGATGGGGATACTCCTGGTCAAGCTTTAGCAGAGGAGATTGCACGCCGTGTTGGGAGGGAAAGATGTTGGAGGGTCAAATGGCCAAAAAAGAATGAGGTCGATCATTTCAAAGATGCAAACGAGGTTTTGATGTACTTGGGCCCTGAGGCCCTGAAGGAAGTTGTTGACAACGCAGAGTTGTATCCTATAAGTGGATTATTTCGCTTCAAAGATTACTTCCACGAGATTGATGCATATTATCACAAAAAATTTGGAAATGAGTTTGGTGTCCCGACTGGATGGAGGTGTCTCAATGATTTGTACAATGTTGTCCCAGGGGAGCTTACCATTGTGACTGGTGTTCCTAATTCAGGCAAAAGTGAGTGGATTGATGCTCTGCTATGCAATCTTAATGCAAGTGTTGGTTGGAAATTTGCTCTCTGCTCTATGGAAAATAAGGTTCGAGAACATGGTAGAAAACTATTGGAGAAACACATCAAGAAGCCTTTCTTTGTTGGACGTTATGGTGGTTCTGTTGAACGATTGAGTAATGAGGAGTTGGAGCAAGGCAAGCAATGGTTAGACGATACATTTTTTCTTTTAAGGTCTGAAAAGGATTCCCTCCCAAGTATTAGTTGGGTCTTGGATCTTGCAAAAGCAGCAGTTTTAAGGCATGGAGTTTCTGGACTGGTAATTGATCCTTATAATGAGCTTGACCATCAACGGCTTCCAAATCAAACTGAAACAGAGTATGTGAGCCAGATGCTTACTAAGGTCAAACGGTTTGCTCAACATCATGCTTGCCATGTTTGGTTTGTTGCACATCCCAGGCAGTTGCAGAACTGGTCTGGAAGTCCACCTAATATGTATGATATAAGTGGAAGTGCACACTTCATAAACAAATGTGATAATGGAATTGTTATTCATCGTAATAGGGACCCTGAAAATGGTCCTATTGATCTCGTACAGGTATGTGTACGGAAAGTGAGAAATAAGGTTGCAGGAACAATTGGAGAAGCTTATTTGGAATATAATAGGGTAACCGGAGAATTCTTGGATGCTGCTGTAGATGTGAAACTTAAGAAACCATCATCTTGA

Protein sequence

AFADGRSSYKDLGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVMQKRSNNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGTSDIIIVEGEIDKLSMAEAGIHNCVSVPDGAPASISEKDVPPADKDKKYQFLWNCKDYLNKASRIILATDGDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSMENKVREHGRKLLEKHIKKPFFVGRYGGSVERLSNEELEQGKQWLDDTFFLLRSEKDSLPSISWVLDLAKAAVLRHGVSGLVIDPYNELDHQRLPNQTETEYVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDPENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFLDAAVDVKLKKPSS*

Homology

[Close]

BLAST of Chy12G210360 vs. ExPASy Swiss-Prot
Match: B5X582 (Twinkle homolog protein, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g30680 PE=1 SV=1)

HSP 1 Score: 786.6 bits (2030), Expect = 1.8e-226
Identity = 361/505 (71.49%), Postives = 429/505 (84.95%), Query Frame = 0


Query: 22  RKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVMQKRSNNQIAVAFTYYRGGALISC 81
           RKITVE ++LEPLCD++ DYFA R IS++TL RN VMQKR  ++I +AFTY++ G L+SC
Sbjct: 192 RKITVEGIELEPLCDEIQDYFAARAISRKTLERNRVMQKRIGDEIVIAFTYWQRGELVSC 251

Query: 82  KYRDANKKFWQEPNTERIFYGIDDIDGTSDIIIVEGEIDKLSMAEAGIHNCVSVPDGAPA 141
           KYR   K F+QE  T RI YG+DDI+ TS++IIVEGEIDKL+M EAG  NCVSVPDGAPA
Sbjct: 252 KYRSLTKMFFQERKTRRILYGLDDIEKTSEVIIVEGEIDKLAMEEAGFLNCVSVPDGAPA 311

Query: 142 SISEKDVPPADKDKKYQFLWNCKDYLNKASRIILATDGDTPGQALAEEIARRVGRERCWR 201
            +S K++P  DKD KY+FLWNC DYL KASRI++ATDGD PGQA+AEEIARR+G+ERCWR
Sbjct: 312 KVSSKEIPSEDKDTKYKFLWNCNDYLKKASRIVIATDGDGPGQAMAEEIARRLGKERCWR 371

Query: 202 VKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHEIDAYYHKKF 261
           VKWPKK+E +HFKDANEVLM  GP  LKE + +AE YPI GLF FKD+F EIDAYY +  
Sbjct: 372 VKWPKKSEDEHFKDANEVLMSKGPHLLKEAILDAEPYPILGLFSFKDFFDEIDAYYDRTH 431

Query: 262 GNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSME 321
           G+E+GV TGW+ L++LY+VVPGELT+VTG+PNSGKSEWIDA+LCNLN SVGWKFALCSME
Sbjct: 432 GHEYGVSTGWKNLDNLYSVVPGELTVVTGIPNSGKSEWIDAMLCNLNHSVGWKFALCSME 491

Query: 322 NKVREHGRKLLEKHIKKPFFVGRYGGSVERLSNEELEQGKQWLDDTFFLLRSEKDSLPSI 381
           NKVR+H RKLLEKHIKKPFF   YG SV+R+S EE ++GK+WL+DTF+ +R E DSLPSI
Sbjct: 492 NKVRDHARKLLEKHIKKPFFDADYGRSVQRMSVEEKDEGKKWLNDTFYPIRCEMDSLPSI 551

Query: 382 SWVLDLAKAAVLRHGVSGLVIDPYNELDHQRLPNQTETEYVSQMLTKVKRFAQHHACHVW 441
            WVL+ AKAAVLR+G+ GLVIDPYNELDHQR P QTETEYVSQMLTK+KRF+QHH+CHVW
Sbjct: 552 DWVLERAKAAVLRYGIRGLVIDPYNELDHQRTPRQTETEYVSQMLTKIKRFSQHHSCHVW 611

Query: 442 FVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDPENGPIDLVQVCVRKVRN 501
           FVAHP+QLQ+W G  PN+YDISGSAHFINKCDNGI++HRNRD   GP+DLVQ+ VRKVRN
Sbjct: 612 FVAHPKQLQHWDGGAPNLYDISGSAHFINKCDNGIIVHRNRDENAGPLDLVQIGVRKVRN 671

Query: 502 KVAGTIGEAYLEYNRVTGEFLDAAV 527
           KVAG IG+AYL Y+R TG + D+ V
Sbjct: 672 KVAGQIGDAYLCYDRTTGSYSDSPV 696

[Close]

BLAST of Chy12G210360 vs. ExPASy Swiss-Prot
Match: F4I6E6 (Primase homolog protein OS=Arabidopsis thaliana OX=3702 GN=At1g30660 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 2.9e-83
Identity = 149/238 (62.61%), Postives = 187/238 (78.57%), Query Frame = 0


Query: 4   DGRSSYKD-LGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVMQKRS 63
           DG+   KD +G+V      RKITVES++LEPLCD++ D+FA R IS +TL RN VMQKR 
Sbjct: 103 DGKLVSKDPIGKVE-----RKITVESIKLEPLCDEIQDFFAARAISGKTLERNRVMQKRI 162

Query: 64  NNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGTSDIIIVEGEIDKL 123
           +++I +AFTY++ G L+SCKYR   KKF QE NT +I YG+DDI+ TS+IIIVEGE DKL
Sbjct: 163 DDEIVIAFTYWQRGELVSCKYRSLTKKFVQERNTRKILYGLDDIEETSEIIIVEGEPDKL 222

Query: 124 SMAEAGIHNCVSVPDGAPASISEKDVPPADKDKKYQFLWNCKDYLNKASRIILATDGDTP 183
           +M EAG  NCVSVPDGAP ++S K++P   KD  ++++WNC DYL KASRI++ATDGD P
Sbjct: 223 AMEEAGFFNCVSVPDGAPETVSSKEIPSESKDTAFKYIWNCNDYLKKASRIVIATDGDGP 282

Query: 184 GQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPI 241
           GQALAEE+ARR+G+ERCW VKWPKK+E +HFKDANEVLM  GP  LKE + NAE YP+
Sbjct: 283 GQALAEELARRLGKERCWLVKWPKKSEDEHFKDANEVLMSKGPHLLKEAILNAEPYPL 335

[Close]

BLAST of Chy12G210360 vs. ExPASy TrEMBL
Match: A0A0A0LYM8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G541890 PE=4 SV=1)

HSP 1 Score: 1092.4 bits (2824), Expect = 0.0e+00
Identity = 523/535 (97.76%), Postives = 530/535 (99.07%), Query Frame = 0


Query: 1   AFADGRSSYKDLGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVMQK 60
           AF DGRSSYKDLGQVALKQNIRKITVESLQLEPLCD+LVDYFAERLISKQTLLRNSVMQK
Sbjct: 183 AFTDGRSSYKDLGQVALKQNIRKITVESLQLEPLCDELVDYFAERLISKQTLLRNSVMQK 242

Query: 61  RSNNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGTSDIIIVEGEID 120
           RS+NQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDG SDIIIVEGE+D
Sbjct: 243 RSDNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGASDIIIVEGEMD 302

Query: 121 KLSMAEAGIHNCVSVPDGAPASISEKDVPPADKDKKYQFLWNCKDYLNKASRIILATDGD 180
           KLSMAEAGIHNCVSVPDGAPAS+SEKDVPPADKDKK+QFLWNCKDYLNKASRIILATDGD
Sbjct: 303 KLSMAEAGIHNCVSVPDGAPASVSEKDVPPADKDKKFQFLWNCKDYLNKASRIILATDGD 362

Query: 181 TPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPI 240
           TPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPI
Sbjct: 363 TPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPI 422

Query: 241 SGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWI 300
           SGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWI
Sbjct: 423 SGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWI 482

Query: 301 DALLCNLNASVGWKFALCSMENKVREHGRKLLEKHIKKPFFVGRYGGSVERLSNEELEQG 360
           DALLCNLNAS GWKFALCSMENKVREHGRKLLEKHIKKPFFVGRYGGSVERLS+EELEQG
Sbjct: 483 DALLCNLNASAGWKFALCSMENKVREHGRKLLEKHIKKPFFVGRYGGSVERLSDEELEQG 542

Query: 361 KQWLDDTFFLLRSEKDSLPSISWVLDLAKAAVLRHGVSGLVIDPYNELDHQRLPNQTETE 420
           KQWLDDTFFLLRSEKDSLPSISWVLDLAKAAVLRHGVSGLVIDPYNELDHQRLPNQTETE
Sbjct: 543 KQWLDDTFFLLRSEKDSLPSISWVLDLAKAAVLRHGVSGLVIDPYNELDHQRLPNQTETE 602

Query: 421 YVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHR 480
           YVSQMLTKVKRFAQHH CHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHR
Sbjct: 603 YVSQMLTKVKRFAQHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHR 662

Query: 481 NRDPENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFLDAAVDVKLKKPSS 536
           NRDPE+GPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFLDAA DVKLKKPSS
Sbjct: 663 NRDPESGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFLDAAGDVKLKKPSS 717

[Close]

BLAST of Chy12G210360 vs. ExPASy TrEMBL
Match: A0A1S3BDI3 (twinkle homolog protein, chloroplastic/mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488704 PE=4 SV=1)

HSP 1 Score: 1026.9 bits (2654), Expect = 2.9e-296
Identity = 495/543 (91.16%), Postives = 513/543 (94.48%), Query Frame = 0


Query: 1   AFADGRSSY---------KDLGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQT 60
           A A+ RSSY         +DLG+VALKQNIRKITVESLQLEPLCDQ+V YFAERLISK+T
Sbjct: 186 ALAEDRSSYQDLGRVALKQDLGRVALKQNIRKITVESLQLEPLCDQVVAYFAERLISKET 245

Query: 61  LLRNSVMQKRSNNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGTSD 120
           LLRNSVMQK   +QIA+AFTYYRGGAL+SCKYRD NKKFWQE NTE+IFYGIDDI+G SD
Sbjct: 246 LLRNSVMQKTFGDQIAIAFTYYRGGALVSCKYRDVNKKFWQEANTEKIFYGIDDIEGASD 305

Query: 121 IIIVEGEIDKLSMAEAGIHNCVSVPDGAPASISEKDVPPADKDKKYQFLWNCKDYLNKAS 180
           IIIVEGEIDKLSMAEAGIHNCVSVPDGAP S+S+KDVP AD+DKKYQFLWNCK+YLNKAS
Sbjct: 306 IIIVEGEIDKLSMAEAGIHNCVSVPDGAPPSVSKKDVPSADQDKKYQFLWNCKNYLNKAS 365

Query: 181 RIILATDGDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEV 240
           RIILATDGDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEV
Sbjct: 366 RIILATDGDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEV 425

Query: 241 VDNAELYPISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGV 300
           VDNAELYPISGLF FKDYFHEIDAYYHKKFG EFGVPTGW  LN+LYNVVPGELTIVTGV
Sbjct: 426 VDNAELYPISGLFNFKDYFHEIDAYYHKKFGFEFGVPTGWNSLNNLYNVVPGELTIVTGV 485

Query: 301 PNSGKSEWIDALLCNLNASVGWKFALCSMENKVREHGRKLLEKHIKKPFFVGRYGGSVER 360
           PNSGKSEWIDALLCNLNASVGWKFALCSMENKVREHGRKLLEKH+KKPFFVGRYGGSVER
Sbjct: 486 PNSGKSEWIDALLCNLNASVGWKFALCSMENKVREHGRKLLEKHMKKPFFVGRYGGSVER 545

Query: 361 LSNEELEQGKQWLDDTFFLLRSEKDSLPSISWVLDLAKAAVLRHGVSGLVIDPYNELDHQ 420
           +S EELEQGKQWLDDTFFLLRSEKDSLPSISWVLDLAKAAVLRHGVSGLVIDPYNELDHQ
Sbjct: 546 MSVEELEQGKQWLDDTFFLLRSEKDSLPSISWVLDLAKAAVLRHGVSGLVIDPYNELDHQ 605

Query: 421 RLPNQTETEYVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINK 480
           RLPNQTETEYVSQMLTKVKRFA HH CHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINK
Sbjct: 606 RLPNQTETEYVSQMLTKVKRFAHHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINK 665

Query: 481 CDNGIVIHRNRDPENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFLDAAVDVKLK 535
           CDNGIVIHRNRDPENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEF DAA D+KLK
Sbjct: 666 CDNGIVIHRNRDPENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFSDAAGDMKLK 725

[Close]

BLAST of Chy12G210360 vs. ExPASy TrEMBL
Match: A0A6J1CKU2 (twinkle homolog protein, chloroplastic/mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012535 PE=4 SV=1)

HSP 1 Score: 962.6 bits (2487), Expect = 6.8e-277
Identity = 460/539 (85.34%), Postives = 491/539 (91.09%), Query Frame = 0


Query: 1   AFADGRSSYKDLGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVMQK 60
           AFADGRSSY  LGQVAL +  RKITVESLQLEPLCD+LV YFAERLISK TLLRNSVMQK
Sbjct: 96  AFADGRSSYGSLGQVALNKKKRKITVESLQLEPLCDELVAYFAERLISKNTLLRNSVMQK 155

Query: 61  RSNNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGTSDIIIVEGEID 120
           RS+NQIA+AFTY+R G L+SCKYRD NKKFWQE NTE+IFYG+D IDG SDIIIVEGE+D
Sbjct: 156 RSDNQIAIAFTYHRCGELVSCKYRDVNKKFWQEANTEKIFYGLDGIDGASDIIIVEGEMD 215

Query: 121 KLSMAEAGIHNCVSVPDGAPASISEKDVPPADKDKKYQFLWNCKDYLNKASRIILATDGD 180
           KLSM EAG HNCVSVPDGAP S+S+KDVPP DKD KYQ+LWNCK+YL+KASRIILATDGD
Sbjct: 216 KLSMEEAGFHNCVSVPDGAPPSVSQKDVPPTDKDTKYQYLWNCKEYLSKASRIILATDGD 275

Query: 181 TPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPI 240
            PGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAEL+PI
Sbjct: 276 PPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELFPI 335

Query: 241 SGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWI 300
            GLF FKDYF EIDAYY KKFGNEFG  TGW+ LN LYNVVPGELTIVTG+PNSGKSEWI
Sbjct: 336 RGLFSFKDYFDEIDAYYDKKFGNEFGASTGWKGLNHLYNVVPGELTIVTGIPNSGKSEWI 395

Query: 301 DALLCNLNASVGWKFALCSMENKVREHGRKLLEKHIKKPFFVGRYGGSVERLSNEELEQG 360
           DALLCNLNASVGWKF LCSMENKVREH RKLLEK IKKPFF  RYG SVER+S EELE G
Sbjct: 396 DALLCNLNASVGWKFVLCSMENKVREHARKLLEKRIKKPFFNARYGESVERMSTEELEIG 455

Query: 361 KQWLDDTFFLLRSEKDSLPSISWVLDLAKAAVLRHGVSGLVIDPYNELDHQRLPNQTETE 420
           KQWL+DTFFL+R E +SLPSI+WVLDLAKAAVLRHGV+GLVIDPYNELDHQR PNQTETE
Sbjct: 456 KQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVTGLVIDPYNELDHQRPPNQTETE 515

Query: 421 YVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHR 480
           YVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSG  PNMYDISGSAHFINKCDNGIVIHR
Sbjct: 516 YVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHR 575

Query: 481 NRDPENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFLD----AAVDVKLKKPSS 536
           NRDPE+GP+DL+QVCVRKVRNKVAGTIGEA+LEYNRVTGEFLD    A ++ +LK+  S
Sbjct: 576 NRDPESGPVDLLQVCVRKVRNKVAGTIGEAFLEYNRVTGEFLDADEPARIEQQLKRSKS 634

[Close]

BLAST of Chy12G210360 vs. ExPASy TrEMBL
Match: A0A6J1CLF6 (twinkle homolog protein, chloroplastic/mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012535 PE=4 SV=1)

HSP 1 Score: 962.6 bits (2487), Expect = 6.8e-277
Identity = 460/539 (85.34%), Postives = 491/539 (91.09%), Query Frame = 0


Query: 1   AFADGRSSYKDLGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVMQK 60
           AFADGRSSY  LGQVAL +  RKITVESLQLEPLCD+LV YFAERLISK TLLRNSVMQK
Sbjct: 176 AFADGRSSYGSLGQVALNKKKRKITVESLQLEPLCDELVAYFAERLISKNTLLRNSVMQK 235

Query: 61  RSNNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGTSDIIIVEGEID 120
           RS+NQIA+AFTY+R G L+SCKYRD NKKFWQE NTE+IFYG+D IDG SDIIIVEGE+D
Sbjct: 236 RSDNQIAIAFTYHRCGELVSCKYRDVNKKFWQEANTEKIFYGLDGIDGASDIIIVEGEMD 295

Query: 121 KLSMAEAGIHNCVSVPDGAPASISEKDVPPADKDKKYQFLWNCKDYLNKASRIILATDGD 180
           KLSM EAG HNCVSVPDGAP S+S+KDVPP DKD KYQ+LWNCK+YL+KASRIILATDGD
Sbjct: 296 KLSMEEAGFHNCVSVPDGAPPSVSQKDVPPTDKDTKYQYLWNCKEYLSKASRIILATDGD 355

Query: 181 TPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPI 240
            PGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAEL+PI
Sbjct: 356 PPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELFPI 415

Query: 241 SGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWI 300
            GLF FKDYF EIDAYY KKFGNEFG  TGW+ LN LYNVVPGELTIVTG+PNSGKSEWI
Sbjct: 416 RGLFSFKDYFDEIDAYYDKKFGNEFGASTGWKGLNHLYNVVPGELTIVTGIPNSGKSEWI 475

Query: 301 DALLCNLNASVGWKFALCSMENKVREHGRKLLEKHIKKPFFVGRYGGSVERLSNEELEQG 360
           DALLCNLNASVGWKF LCSMENKVREH RKLLEK IKKPFF  RYG SVER+S EELE G
Sbjct: 476 DALLCNLNASVGWKFVLCSMENKVREHARKLLEKRIKKPFFNARYGESVERMSTEELEIG 535

Query: 361 KQWLDDTFFLLRSEKDSLPSISWVLDLAKAAVLRHGVSGLVIDPYNELDHQRLPNQTETE 420
           KQWL+DTFFL+R E +SLPSI+WVLDLAKAAVLRHGV+GLVIDPYNELDHQR PNQTETE
Sbjct: 536 KQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVTGLVIDPYNELDHQRPPNQTETE 595

Query: 421 YVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHR 480
           YVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSG  PNMYDISGSAHFINKCDNGIVIHR
Sbjct: 596 YVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHR 655

Query: 481 NRDPENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFLD----AAVDVKLKKPSS 536
           NRDPE+GP+DL+QVCVRKVRNKVAGTIGEA+LEYNRVTGEFLD    A ++ +LK+  S
Sbjct: 656 NRDPESGPVDLLQVCVRKVRNKVAGTIGEAFLEYNRVTGEFLDADEPARIEQQLKRSKS 714

[Close]

BLAST of Chy12G210360 vs. ExPASy TrEMBL
Match: A0A6J1EH06 (twinkle homolog protein, chloroplastic/mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434017 PE=4 SV=1)

HSP 1 Score: 958.4 bits (2476), Expect = 1.3e-275
Identity = 458/536 (85.45%), Postives = 489/536 (91.23%), Query Frame = 0


Query: 1   AFADGRSSYKDLGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVMQK 60
           AFADGRSS++  GQ+ LKQ  RKITVESLQLEPLCD+LV YFAERLISK TLLRNSVMQK
Sbjct: 185 AFADGRSSHQISGQLTLKQKKRKITVESLQLEPLCDELVAYFAERLISKDTLLRNSVMQK 244

Query: 61  RSNNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGTSDIIIVEGEID 120
           RSNNQI++AFTY R GALISCKYRD NKKFWQE NTE+IFYG+DDIDG SDIIIVEGEID
Sbjct: 245 RSNNQISIAFTYKRRGALISCKYRDVNKKFWQEANTEKIFYGLDDIDGASDIIIVEGEID 304

Query: 121 KLSMAEAGIHNCVSVPDGAPASISEKDVPPADKDKKYQFLWNCKDYLNKASRIILATDGD 180
           KLSMAEAG HNCVSVPDGAP S S+KDVPP D+D KYQ+LWNCKDYL+KASRIILATDGD
Sbjct: 305 KLSMAEAGFHNCVSVPDGAPPSASQKDVPPVDQDTKYQYLWNCKDYLSKASRIILATDGD 364

Query: 181 TPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPI 240
            PGQALAEEIARRVGRERCWRVKWPKKNE +HFKDANEVLMYLGPEAL+EVVDNAEL+PI
Sbjct: 365 APGQALAEEIARRVGRERCWRVKWPKKNEANHFKDANEVLMYLGPEALREVVDNAELFPI 424

Query: 241 SGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWI 300
            GLF FK+YF EID+YYHKK GNEFGVPTGW+ LNDLYNVVPGELTIVTG+PNSGKSEWI
Sbjct: 425 RGLFNFKNYFDEIDSYYHKKGGNEFGVPTGWKALNDLYNVVPGELTIVTGIPNSGKSEWI 484

Query: 301 DALLCNLNASVGWKFALCSMENKVREHGRKLLEKHIKKPFFVGRYGGSVERLSNEELEQG 360
           DALLCNLN S GWKF LCSMEN+VREH RKLLEK IKKPFF  RYGG+VER+S +ELEQG
Sbjct: 485 DALLCNLNESSGWKFVLCSMENQVREHARKLLEKRIKKPFFSARYGGAVERMSLDELEQG 544

Query: 361 KQWLDDTFFLLRSEKDSLPSISWVLDLAKAAVLRHGVSGLVIDPYNELDHQRLPNQTETE 420
           KQWL+DTFFL R E +SLPSI+WVLDLAKAAVLRHGVSGLVIDPYNELDHQR  +QTETE
Sbjct: 545 KQWLNDTFFLARCENESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPSSQTETE 604

Query: 421 YVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHR 480
           YVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSG  PNMYDISGSAHFINKCDNGIVIHR
Sbjct: 605 YVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHR 664

Query: 481 NRDPENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFLDA----AVDVKLKK 533
           NRDPE+GPIDLVQVCVRKVRNKVAGTIGEAYL YNRVTGEFLD      ++ +LKK
Sbjct: 665 NRDPESGPIDLVQVCVRKVRNKVAGTIGEAYLAYNRVTGEFLDTDESFRIEQRLKK 720

[Close]

BLAST of Chy12G210360 vs. NCBI nr
Match: XP_011659233.2 (twinkle homolog protein, chloroplastic/mitochondrial [Cucumis sativus])

HSP 1 Score: 1081 bits (2796), Expect = 0.0
Identity = 524/535 (97.94%), Postives = 530/535 (99.07%), Query Frame = 0


Query: 1   AFADGRSSYKDLGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVMQK 60
           AFADGRSSYK LGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVMQK
Sbjct: 183 AFADGRSSYKHLGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVMQK 242

Query: 61  RSNNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGTSDIIIVEGEID 120
           RS+NQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDG SDIIIVEGE+D
Sbjct: 243 RSDNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGASDIIIVEGEMD 302

Query: 121 KLSMAEAGIHNCVSVPDGAPASISEKDVPPADKDKKYQFLWNCKDYLNKASRIILATDGD 180
           KLSMAEAGIHNCVSVPDGAPAS+SEKDVPPADKDKK+QFLWNCKDYLNKASRIILATDGD
Sbjct: 303 KLSMAEAGIHNCVSVPDGAPASVSEKDVPPADKDKKFQFLWNCKDYLNKASRIILATDGD 362

Query: 181 TPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPI 240
           TPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPI
Sbjct: 363 TPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPI 422

Query: 241 SGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWI 300
           SGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWI
Sbjct: 423 SGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWI 482

Query: 301 DALLCNLNASVGWKFALCSMENKVREHGRKLLEKHIKKPFFVGRYGGSVERLSNEELEQG 360
           DALLCNLNAS GWKFALCSMENKVREHGRKLLEKHIKKPFFVGRYGGSVERLS+EELEQG
Sbjct: 483 DALLCNLNASAGWKFALCSMENKVREHGRKLLEKHIKKPFFVGRYGGSVERLSDEELEQG 542

Query: 361 KQWLDDTFFLLRSEKDSLPSISWVLDLAKAAVLRHGVSGLVIDPYNELDHQRLPNQTETE 420
           KQWLDDTFFLLRSEKDSLPSISWVLDLAKAAVLRHGVSGLVIDPYNELDHQRLPNQTETE
Sbjct: 543 KQWLDDTFFLLRSEKDSLPSISWVLDLAKAAVLRHGVSGLVIDPYNELDHQRLPNQTETE 602

Query: 421 YVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHR 480
           YVSQMLTKVKRFAQHH CHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHR
Sbjct: 603 YVSQMLTKVKRFAQHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHR 662

Query: 481 NRDPENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFLDAAVDVKLKKPSS 535
           NRDPE+GPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFLDAA DVKLKKPSS
Sbjct: 663 NRDPESGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFLDAAGDVKLKKPSS 717

[Close]

BLAST of Chy12G210360 vs. NCBI nr
Match: XP_008445781.1 (PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 1016 bits (2626), Expect = 0.0
Identity = 495/543 (91.16%), Postives = 513/543 (94.48%), Query Frame = 0


Query: 1   AFADGRSSYKDLGQVALKQ---------NIRKITVESLQLEPLCDQLVDYFAERLISKQT 60
           A A+ RSSY+DLG+VALKQ         NIRKITVESLQLEPLCDQ+V YFAERLISK+T
Sbjct: 186 ALAEDRSSYQDLGRVALKQDLGRVALKQNIRKITVESLQLEPLCDQVVAYFAERLISKET 245

Query: 61  LLRNSVMQKRSNNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGTSD 120
           LLRNSVMQK   +QIA+AFTYYRGGAL+SCKYRD NKKFWQE NTE+IFYGIDDI+G SD
Sbjct: 246 LLRNSVMQKTFGDQIAIAFTYYRGGALVSCKYRDVNKKFWQEANTEKIFYGIDDIEGASD 305

Query: 121 IIIVEGEIDKLSMAEAGIHNCVSVPDGAPASISEKDVPPADKDKKYQFLWNCKDYLNKAS 180
           IIIVEGEIDKLSMAEAGIHNCVSVPDGAP S+S+KDVP AD+DKKYQFLWNCK+YLNKAS
Sbjct: 306 IIIVEGEIDKLSMAEAGIHNCVSVPDGAPPSVSKKDVPSADQDKKYQFLWNCKNYLNKAS 365

Query: 181 RIILATDGDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEV 240
           RIILATDGDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEV
Sbjct: 366 RIILATDGDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEV 425

Query: 241 VDNAELYPISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGV 300
           VDNAELYPISGLF FKDYFHEIDAYYHKKFG EFGVPTGW  LN+LYNVVPGELTIVTGV
Sbjct: 426 VDNAELYPISGLFNFKDYFHEIDAYYHKKFGFEFGVPTGWNSLNNLYNVVPGELTIVTGV 485

Query: 301 PNSGKSEWIDALLCNLNASVGWKFALCSMENKVREHGRKLLEKHIKKPFFVGRYGGSVER 360
           PNSGKSEWIDALLCNLNASVGWKFALCSMENKVREHGRKLLEKH+KKPFFVGRYGGSVER
Sbjct: 486 PNSGKSEWIDALLCNLNASVGWKFALCSMENKVREHGRKLLEKHMKKPFFVGRYGGSVER 545

Query: 361 LSNEELEQGKQWLDDTFFLLRSEKDSLPSISWVLDLAKAAVLRHGVSGLVIDPYNELDHQ 420
           +S EELEQGKQWLDDTFFLLRSEKDSLPSISWVLDLAKAAVLRHGVSGLVIDPYNELDHQ
Sbjct: 546 MSVEELEQGKQWLDDTFFLLRSEKDSLPSISWVLDLAKAAVLRHGVSGLVIDPYNELDHQ 605

Query: 421 RLPNQTETEYVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINK 480
           RLPNQTETEYVSQMLTKVKRFA HH CHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINK
Sbjct: 606 RLPNQTETEYVSQMLTKVKRFAHHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINK 665

Query: 481 CDNGIVIHRNRDPENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFLDAAVDVKLK 534
           CDNGIVIHRNRDPENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEF DAA D+KLK
Sbjct: 666 CDNGIVIHRNRDPENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFSDAAGDMKLK 725

[Close]

BLAST of Chy12G210360 vs. NCBI nr
Match: XP_011659237.2 (twinkle homolog protein, chloroplastic/mitochondrial isoform X1 [Cucumis sativus] >KAE8653324.1 hypothetical protein Csa_023218 [Cucumis sativus])

HSP 1 Score: 1009 bits (2609), Expect = 0.0
Identity = 486/535 (90.84%), Postives = 513/535 (95.89%), Query Frame = 0


Query: 1   AFADGRSSYKDLGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVMQK 60
           AF DGRSSYKDLGQVALKQNIRKITVESLQLEPLCD+LVDYFAERLISKQTLLRNSVMQK
Sbjct: 180 AFTDGRSSYKDLGQVALKQNIRKITVESLQLEPLCDELVDYFAERLISKQTLLRNSVMQK 239

Query: 61  RSNNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGTSDIIIVEGEID 120
           RSNNQIAVAFTYYRGGALISCKYRDA K+FWQE  TE+IFYG+DDIDG SDIIIVEGEID
Sbjct: 240 RSNNQIAVAFTYYRGGALISCKYRDAKKRFWQEAKTEKIFYGLDDIDGASDIIIVEGEID 299

Query: 121 KLSMAEAGIHNCVSVPDGAPASISEKDVPPADKDKKYQFLWNCKDYLNKASRIILATDGD 180
           KLSMAEAGIHNCVSVPDGAP S+S+K+VPPA + +K+Q+LWNC+DYLNKA RIILATDGD
Sbjct: 300 KLSMAEAGIHNCVSVPDGAPPSVSKKNVPPAHQARKFQYLWNCRDYLNKALRIILATDGD 359

Query: 181 TPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPI 240
           TPGQALAEEIARRVG+ERCWRVKWPKK+EVDHFKDANEVLMYLGPEALKEVVDNAELYPI
Sbjct: 360 TPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPI 419

Query: 241 SGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWI 300
           SGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWI
Sbjct: 420 SGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWI 479

Query: 301 DALLCNLNASVGWKFALCSMENKVREHGRKLLEKHIKKPFFVGRYGGSVERLSNEELEQG 360
           DALLCNLNASVGWKFALCS+ENKV EH RKLLEKHIKKPFF GRYGGSVER+S EELEQG
Sbjct: 480 DALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERMSVEELEQG 539

Query: 361 KQWLDDTFFLLRSEKDSLPSISWVLDLAKAAVLRHGVSGLVIDPYNELDHQRLPNQTETE 420
           KQWL+DTFF+LR E  SL SISWVLDLAKAAVLRHGVSGLVIDPY+ELDHQRLPNQ+ETE
Sbjct: 540 KQWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETE 599

Query: 421 YVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHR 480
           YVSQMLT+VK+FAQH+ACHVWFVAHP QLQNWSG PPNM+DISG+AHFINKCDNGIVIHR
Sbjct: 600 YVSQMLTEVKQFAQHNACHVWFVAHPMQLQNWSGCPPNMHDISGNAHFINKCDNGIVIHR 659

Query: 481 NRDPENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFLDAAVDVKLKKPSS 535
           NRDPE+GPIDLVQVCVRKVRNKVAGTIGEAYL YNRVTGEF DAA D+KLKKPSS
Sbjct: 660 NRDPESGPIDLVQVCVRKVRNKVAGTIGEAYLAYNRVTGEFFDAAGDMKLKKPSS 714

[Close]

BLAST of Chy12G210360 vs. NCBI nr
Match: XP_038894379.1 (twinkle homolog protein, chloroplastic/mitochondrial [Benincasa hispida])

HSP 1 Score: 970 bits (2508), Expect = 0.0
Identity = 465/532 (87.41%), Postives = 493/532 (92.67%), Query Frame = 0


Query: 1   AFADGRSSYKDLGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVMQK 60
           AFADG SSY++LGQVALKQN RKITVESLQLEPLCD+LV YFAERLISK TLLRNSVMQK
Sbjct: 183 AFADGSSSYRNLGQVALKQNKRKITVESLQLEPLCDELVAYFAERLISKNTLLRNSVMQK 242

Query: 61  RSNNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGTSDIIIVEGEID 120
           R NNQI +AFTYYR GALISCKYRD NKKFWQE NTE+IFYG+DDI GTSDIIIVEGEID
Sbjct: 243 RFNNQIVIAFTYYRCGALISCKYRDVNKKFWQEANTEKIFYGLDDIQGTSDIIIVEGEID 302

Query: 121 KLSMAEAGIHNCVSVPDGAPASISEKDVPPADKDKKYQFLWNCKDYLNKASRIILATDGD 180
           KLSMAEAG HNCVSVPDGAP S+S+ DVPPAD+D KYQ+LWNCKDYLNKASRIILATDGD
Sbjct: 303 KLSMAEAGFHNCVSVPDGAPPSVSKNDVPPADQDMKYQYLWNCKDYLNKASRIILATDGD 362

Query: 181 TPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPI 240
            PGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPI
Sbjct: 363 PPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPI 422

Query: 241 SGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWI 300
            GLF FKDYF EIDAYYHKKFGNEFGV TGW+ LNDLYNVVPGELTIVTG+PNSGKSEWI
Sbjct: 423 RGLFSFKDYFDEIDAYYHKKFGNEFGVSTGWKALNDLYNVVPGELTIVTGIPNSGKSEWI 482

Query: 301 DALLCNLNASVGWKFALCSMENKVREHGRKLLEKHIKKPFFVGRYGGSVERLSNEELEQG 360
           DALLCNLNAS GWKF LCSMENKVR+H RKLLEKHIKKPFF  RYGGSV+R+S EELEQG
Sbjct: 483 DALLCNLNASAGWKFILCSMENKVRDHARKLLEKHIKKPFFAARYGGSVDRMSIEELEQG 542

Query: 361 KQWLDDTFFLLRSEKDSLPSISWVLDLAKAAVLRHGVSGLVIDPYNELDHQRLPNQTETE 420
           K WL+DTFFL+R E +SLPSI+WVLDLAKAAVLRHGVSGLVIDPYNELDHQR PNQTETE
Sbjct: 543 KLWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLVIDPYNELDHQRPPNQTETE 602

Query: 421 YVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHR 480
           YVSQMLTKVKRFAQHHACHVWFVAHP+QLQNWSG  PNMYDISGSAHFINKCDNGIVIHR
Sbjct: 603 YVSQMLTKVKRFAQHHACHVWFVAHPKQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHR 662

Query: 481 NRDPENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFLDAAVDVKLKK 532
           NRDP+ GPIDL+QV VRKVRNKVAGTIGEAYL YNR+TGEF+D    V++++
Sbjct: 663 NRDPDFGPIDLLQVSVRKVRNKVAGTIGEAYLAYNRITGEFVDTDKSVRIER 714

[Close]

BLAST of Chy12G210360 vs. NCBI nr
Match: XP_022142395.1 (twinkle homolog protein, chloroplastic/mitochondrial isoform X2 [Momordica charantia])

HSP 1 Score: 951 bits (2459), Expect = 0.0
Identity = 460/539 (85.34%), Postives = 491/539 (91.09%), Query Frame = 0


Query: 1   AFADGRSSYKDLGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVMQK 60
           AFADGRSSY  LGQVAL +  RKITVESLQLEPLCD+LV YFAERLISK TLLRNSVMQK
Sbjct: 96  AFADGRSSYGSLGQVALNKKKRKITVESLQLEPLCDELVAYFAERLISKNTLLRNSVMQK 155

Query: 61  RSNNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGTSDIIIVEGEID 120
           RS+NQIA+AFTY+R G L+SCKYRD NKKFWQE NTE+IFYG+D IDG SDIIIVEGE+D
Sbjct: 156 RSDNQIAIAFTYHRCGELVSCKYRDVNKKFWQEANTEKIFYGLDGIDGASDIIIVEGEMD 215

Query: 121 KLSMAEAGIHNCVSVPDGAPASISEKDVPPADKDKKYQFLWNCKDYLNKASRIILATDGD 180
           KLSM EAG HNCVSVPDGAP S+S+KDVPP DKD KYQ+LWNCK+YL+KASRIILATDGD
Sbjct: 216 KLSMEEAGFHNCVSVPDGAPPSVSQKDVPPTDKDTKYQYLWNCKEYLSKASRIILATDGD 275

Query: 181 TPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPI 240
            PGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAEL+PI
Sbjct: 276 PPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELFPI 335

Query: 241 SGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWI 300
            GLF FKDYF EIDAYY KKFGNEFG  TGW+ LN LYNVVPGELTIVTG+PNSGKSEWI
Sbjct: 336 RGLFSFKDYFDEIDAYYDKKFGNEFGASTGWKGLNHLYNVVPGELTIVTGIPNSGKSEWI 395

Query: 301 DALLCNLNASVGWKFALCSMENKVREHGRKLLEKHIKKPFFVGRYGGSVERLSNEELEQG 360
           DALLCNLNASVGWKF LCSMENKVREH RKLLEK IKKPFF  RYG SVER+S EELE G
Sbjct: 396 DALLCNLNASVGWKFVLCSMENKVREHARKLLEKRIKKPFFNARYGESVERMSTEELEIG 455

Query: 361 KQWLDDTFFLLRSEKDSLPSISWVLDLAKAAVLRHGVSGLVIDPYNELDHQRLPNQTETE 420
           KQWL+DTFFL+R E +SLPSI+WVLDLAKAAVLRHGV+GLVIDPYNELDHQR PNQTETE
Sbjct: 456 KQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVTGLVIDPYNELDHQRPPNQTETE 515

Query: 421 YVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHR 480
           YVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSG  PNMYDISGSAHFINKCDNGIVIHR
Sbjct: 516 YVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHR 575

Query: 481 NRDPENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFLDA----AVDVKLKKPSS 535
           NRDPE+GP+DL+QVCVRKVRNKVAGTIGEA+LEYNRVTGEFLDA     ++ +LK+  S
Sbjct: 576 NRDPESGPVDLLQVCVRKVRNKVAGTIGEAFLEYNRVTGEFLDADEPARIEQQLKRSKS 634

[Close]

BLAST of Chy12G210360 vs. TAIR 10
Match: AT1G30680.1 (toprim domain-containing protein )

HSP 1 Score: 786.6 bits (2030), Expect = 1.3e-227
Identity = 361/505 (71.49%), Postives = 429/505 (84.95%), Query Frame = 0


Query: 22  RKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVMQKRSNNQIAVAFTYYRGGALISC 81
           RKITVE ++LEPLCD++ DYFA R IS++TL RN VMQKR  ++I +AFTY++ G L+SC
Sbjct: 192 RKITVEGIELEPLCDEIQDYFAARAISRKTLERNRVMQKRIGDEIVIAFTYWQRGELVSC 251

Query: 82  KYRDANKKFWQEPNTERIFYGIDDIDGTSDIIIVEGEIDKLSMAEAGIHNCVSVPDGAPA 141
           KYR   K F+QE  T RI YG+DDI+ TS++IIVEGEIDKL+M EAG  NCVSVPDGAPA
Sbjct: 252 KYRSLTKMFFQERKTRRILYGLDDIEKTSEVIIVEGEIDKLAMEEAGFLNCVSVPDGAPA 311

Query: 142 SISEKDVPPADKDKKYQFLWNCKDYLNKASRIILATDGDTPGQALAEEIARRVGRERCWR 201
            +S K++P  DKD KY+FLWNC DYL KASRI++ATDGD PGQA+AEEIARR+G+ERCWR
Sbjct: 312 KVSSKEIPSEDKDTKYKFLWNCNDYLKKASRIVIATDGDGPGQAMAEEIARRLGKERCWR 371

Query: 202 VKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHEIDAYYHKKF 261
           VKWPKK+E +HFKDANEVLM  GP  LKE + +AE YPI GLF FKD+F EIDAYY +  
Sbjct: 372 VKWPKKSEDEHFKDANEVLMSKGPHLLKEAILDAEPYPILGLFSFKDFFDEIDAYYDRTH 431

Query: 262 GNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNASVGWKFALCSME 321
           G+E+GV TGW+ L++LY+VVPGELT+VTG+PNSGKSEWIDA+LCNLN SVGWKFALCSME
Sbjct: 432 GHEYGVSTGWKNLDNLYSVVPGELTVVTGIPNSGKSEWIDAMLCNLNHSVGWKFALCSME 491

Query: 322 NKVREHGRKLLEKHIKKPFFVGRYGGSVERLSNEELEQGKQWLDDTFFLLRSEKDSLPSI 381
           NKVR+H RKLLEKHIKKPFF   YG SV+R+S EE ++GK+WL+DTF+ +R E DSLPSI
Sbjct: 492 NKVRDHARKLLEKHIKKPFFDADYGRSVQRMSVEEKDEGKKWLNDTFYPIRCEMDSLPSI 551

Query: 382 SWVLDLAKAAVLRHGVSGLVIDPYNELDHQRLPNQTETEYVSQMLTKVKRFAQHHACHVW 441
            WVL+ AKAAVLR+G+ GLVIDPYNELDHQR P QTETEYVSQMLTK+KRF+QHH+CHVW
Sbjct: 552 DWVLERAKAAVLRYGIRGLVIDPYNELDHQRTPRQTETEYVSQMLTKIKRFSQHHSCHVW 611

Query: 442 FVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDPENGPIDLVQVCVRKVRN 501
           FVAHP+QLQ+W G  PN+YDISGSAHFINKCDNGI++HRNRD   GP+DLVQ+ VRKVRN
Sbjct: 612 FVAHPKQLQHWDGGAPNLYDISGSAHFINKCDNGIIVHRNRDENAGPLDLVQIGVRKVRN 671

Query: 502 KVAGTIGEAYLEYNRVTGEFLDAAV 527
           KVAG IG+AYL Y+R TG + D+ V
Sbjct: 672 KVAGQIGDAYLCYDRTTGSYSDSPV 696

[Close]

BLAST of Chy12G210360 vs. TAIR 10
Match: AT1G30660.1 (nucleic acid binding;nucleic acid binding )

HSP 1 Score: 310.8 bits (795), Expect = 2.1e-84
Identity = 149/238 (62.61%), Postives = 187/238 (78.57%), Query Frame = 0


Query: 4   DGRSSYKD-LGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVMQKRS 63
           DG+   KD +G+V      RKITVES++LEPLCD++ D+FA R IS +TL RN VMQKR 
Sbjct: 103 DGKLVSKDPIGKVE-----RKITVESIKLEPLCDEIQDFFAARAISGKTLERNRVMQKRI 162

Query: 64  NNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGTSDIIIVEGEIDKL 123
           +++I +AFTY++ G L+SCKYR   KKF QE NT +I YG+DDI+ TS+IIIVEGE DKL
Sbjct: 163 DDEIVIAFTYWQRGELVSCKYRSLTKKFVQERNTRKILYGLDDIEETSEIIIVEGEPDKL 222

Query: 124 SMAEAGIHNCVSVPDGAPASISEKDVPPADKDKKYQFLWNCKDYLNKASRIILATDGDTP 183
           +M EAG  NCVSVPDGAP ++S K++P   KD  ++++WNC DYL KASRI++ATDGD P
Sbjct: 223 AMEEAGFFNCVSVPDGAPETVSSKEIPSESKDTAFKYIWNCNDYLKKASRIVIATDGDGP 282

Query: 184 GQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPI 241
           GQALAEE+ARR+G+ERCW VKWPKK+E +HFKDANEVLM  GP  LKE + NAE YP+
Sbjct: 283 GQALAEELARRLGKERCWLVKWPKKSEDEHFKDANEVLMSKGPHLLKEAILNAEPYPL 335

The following BLAST results are available for this feature:

BLAST of Chy12G210360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B5X582	1.8e-226	71.49	Twinkle homolog protein, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=...	[more]
F4I6E6	2.9e-83	62.61	Primase homolog protein OS=Arabidopsis thaliana OX=3702 GN=At1g30660 PE=3 SV=1	[more]

BLAST of Chy12G210360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYM8	0.0e+00	97.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G541890 PE=4 SV=1	[more]
A0A1S3BDI3	2.9e-296	91.16	twinkle homolog protein, chloroplastic/mitochondrial isoform X1 OS=Cucumis melo ...	[more]
A0A6J1CKU2	6.8e-277	85.34	twinkle homolog protein, chloroplastic/mitochondrial isoform X2 OS=Momordica cha...	[more]
A0A6J1CLF6	6.8e-277	85.34	twinkle homolog protein, chloroplastic/mitochondrial isoform X1 OS=Momordica cha...	[more]
A0A6J1EH06	1.3e-275	85.45	twinkle homolog protein, chloroplastic/mitochondrial isoform X1 OS=Cucurbita mos...	[more]

BLAST of Chy12G210360 vs. NCBI nr


Match Name	Identity	Description
XP_011659233.2	97.94	twinkle homolog protein, chloroplastic/mitochondrial [Cucumis sativus]	[more]
XP_008445781.1	91.16	PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial isoform X1 [Cucu...	[more]
XP_011659237.2	90.84	twinkle homolog protein, chloroplastic/mitochondrial isoform X1 [Cucumis sativus...	[more]
XP_038894379.1	87.41	twinkle homolog protein, chloroplastic/mitochondrial [Benincasa hispida]	[more]
XP_022142395.1	85.34	twinkle homolog protein, chloroplastic/mitochondrial isoform X2 [Momordica chara...	[more]

BLAST of Chy12G210360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30680.1	1.3e-227	71.49	toprim domain-containing protein	[more]
AT1G30660.1	2.1e-84	62.61	nucleic acid binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006171	TOPRIM domain	SMART	SM00493	toprim5	coord: 110..199 e-value: 1.4E-8 score: 44.5
IPR006171	TOPRIM domain	PFAM	PF13662	Toprim_4	coord: 111..202 e-value: 2.1E-18 score: 66.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 245..524 e-value: 2.3E-45 score: 157.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 266..511
None	No IPR available	GENE3D	3.40.1360.10		coord: 97..239 e-value: 1.1E-31 score: 111.4
None	No IPR available	SUPERFAMILY	56731	DNA primase core	coord: 42..221
IPR007694	DNA helicase, DnaB-like, C-terminal	PFAM	PF03796	DnaB_C	coord: 266..516 e-value: 1.1E-7 score: 31.5
IPR007694	DNA helicase, DnaB-like, C-terminal	PROSITE	PS51199	SF4_HELICASE	coord: 260..528 score: 43.261215
IPR027032	Twinkle-like protein	PANTHER	PTHR12873	T7-LIKE MITOCHONDRIAL DNA HELICASE	coord: 18..521
IPR034154	Archaeal primase DnaG/twinkle, TOPRIM domain	CDD	cd01029	TOPRIM_primases	coord: 112..205 e-value: 1.08414E-9 score: 53.043

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G210360.1	Chy12G210360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0006260	DNA replication
molecular_function	GO:0043139	5'-3' DNA helicase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003678	DNA helicase activity