Chy12G210080 (gene) Cucumber (hystrix) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGCTTCATTATCCTAGGTACACGAAGAGGGATTATGAGGAAATGGAGGAAGGTACGTTGGATTTGCTTCTGAAACAATATGGACTCTGTTTTGATGGTACCCTTGAGGAAAAAGGGCATTTGCTATTGGGAAGTTCTTATGGCCTTACCAAGTTTGAATTTACCCACCATGTGTTTGATGAAATTCCTAAAAAAAAAAAGAAAAAAAGAAAAAAGAAAAAATATCCAGTTTTTAAGATGCCGCTTCATTATCCTAGGTACACGAAGAGGGATTATGAGGAAATGGAGGAAGGTACGTTGGATTTGCTTCTGAAACAATATGGACTCTGTTTTGATGGTACCCTTGAGGAAAAAGGGCATTTGCTATTGGGAAGTTCTTATGGCCTTACCAAGTTTGAATTTACCCACCATGTGTTTGATGAAATTCCTAAAAAAAAAAAGAAAAAAAGAAAAAAGAAAAAATATCCAGTTTTTAAG ATGCCGCTTCATTATCCTAGGTACACGAAGAGGGATTATGAGGAAATGGAGGAAGGTACGTTGGATTTGCTTCTGAAACAATATGGACTCTGTTTTGATGGTACCCTTGAGGAAAAAGGGCATTTGCTATTGGGAAGTTCTTATGGCCTTACCAAGTTTGAATTTACCCACCATGTGTTTGATGAAATTCCTAAAAAAAAAAAGAAAAAAAGAAAAAAGAAAAAATATCCAGTTTTTAAG MPLHYPRYTKRDYEEMEEGTLDLLLKQYGLCFDGTLEEKGHLLLGSSYGLTKFEFTHHVFDEIPKKKKKKRKKKKYPVFK Homology
BLAST of Chy12G210080 vs. ExPASy TrEMBL
Match: A0A5D3CPN0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00090 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.8e-14 Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 0
BLAST of Chy12G210080 vs. ExPASy TrEMBL
Match: A0A0A0L4U1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G047750 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.8e-14 Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 0
BLAST of Chy12G210080 vs. ExPASy TrEMBL
Match: A0A1S3BM13 (uncharacterized protein LOC103491021 OS=Cucumis melo OX=3656 GN=LOC103491021 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.8e-14 Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 0
BLAST of Chy12G210080 vs. ExPASy TrEMBL
Match: A0A6J1DL49 (uncharacterized protein LOC111021455 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021455 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 6.0e-12 Identity = 36/46 (78.26%), Postives = 39/46 (84.78%), Query Frame = 0
BLAST of Chy12G210080 vs. ExPASy TrEMBL
Match: A0A6J1DIR5 (uncharacterized protein LOC111021455 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021455 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 6.0e-12 Identity = 36/46 (78.26%), Postives = 39/46 (84.78%), Query Frame = 0
BLAST of Chy12G210080 vs. NCBI nr
Match: XP_011650470.1 (uncharacterized protein LOC105434788 [Cucumis sativus] >KGN56014.1 hypothetical protein Csa_011328 [Cucumis sativus]) HSP 1 Score: 86.7 bits (213), Expect = 7.87e-20 Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 0
BLAST of Chy12G210080 vs. NCBI nr
Match: XP_008449025.1 (PREDICTED: uncharacterized protein LOC103491021 [Cucumis melo]) HSP 1 Score: 86.7 bits (213), Expect = 7.87e-20 Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 0
BLAST of Chy12G210080 vs. NCBI nr
Match: KAA0065725.1 (uncharacterized protein E6C27_scaffold37G00120 [Cucumis melo var. makuwa] >TYK13751.1 uncharacterized protein E5676_scaffold488G00090 [Cucumis melo var. makuwa]) HSP 1 Score: 86.7 bits (213), Expect = 7.87e-20 Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 0
BLAST of Chy12G210080 vs. NCBI nr
Match: XP_038904207.1 (uncharacterized protein LOC120090553 [Benincasa hispida]) HSP 1 Score: 83.2 bits (204), Expect = 1.73e-18 Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 0
BLAST of Chy12G210080 vs. NCBI nr
Match: XP_022154125.1 (uncharacterized protein LOC111021455 isoform X2 [Momordica charantia]) HSP 1 Score: 79.3 bits (194), Expect = 5.70e-17 Identity = 36/46 (78.26%), Postives = 39/46 (84.78%), Query Frame = 0
BLAST of Chy12G210080 vs. TAIR 10
Match: AT3G09950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.2 bits (152), Expect = 1.1e-10 Identity = 33/60 (55.00%), Postives = 38/60 (63.33%), Query Frame = 0
BLAST of Chy12G210080 vs. TAIR 10
Match: AT5G55620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 60.5 bits (145), Expect = 7.3e-10 Identity = 25/39 (64.10%), Postives = 33/39 (84.62%), Query Frame = 0
BLAST of Chy12G210080 vs. TAIR 10
Match: AT5G41761.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 52.8 bits (125), Expect = 1.5e-07 Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 0
BLAST of Chy12G210080 vs. TAIR 10
Match: AT3G55570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 51.6 bits (122), Expect = 3.4e-07 Identity = 23/46 (50.00%), Postives = 29/46 (63.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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