Chy12G210030 (gene) Cucumber (hystrix) v1

Overview
NameChy12G210030
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionATP-dependent DNA helicase
LocationchrH12: 4710343 .. 4718653 (-)
RNA-Seq ExpressionChy12G210030
SyntenyChy12G210030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTAACTATACAAATTTAAAGATTTGAAAGTTGAAAAGTTGTAACATTTTTTTATAGGCTTCCTTAATTTTTTTTTCTACCAACATTGTAGAAATTTGGATCCATCCAATGAATTGTATAATGGGACAAGATTGGTATGTCGATCATTTAGCAAAAATATTATACATGCTGAAATATCAATGGTGATCATGCACGGAGTTTTTCTTCCATGAATATCGTTAAGCCCACCAAATGACAATGAATATTCATTAAAGTTCAAGATAAAACAATTTCCAATTCCCCGTTTGTTTATGCTTTGCAATGATAGTTAACAAAATACGATGACAAACAATTCCTAATGTTGGAATATATCCAACTTCATGTTACACCATCTAGTGAAATTTCAATGGAGACAACAAAACTTTGAATCAAGCCCATAGGTGACAATAAATTACCTTCAAATTGTACAAACAAAATATTGTTTATAAATAAATCTTTTTTTTATATATGCAATTCTTACATTTAAATTCGTATATTTTAATTTAATTATTGTAACTTATTCTCATGTAATTATTTTATTACATTTTGAATTTCGTACTTTTAAATTTAGCACAACCTAAAAATATACATGCAATGTTTATTATAATCTAAAGCTACACATTATACGTGTCATGCATGTGTCTTTTACTAGTCTTCAAAGATTTAAGATTATTTAACTCAATAAGAATGTGATATTAGGTGGATTAAGGGATAGTTATTTACATGTTTTTTTAGTAGTAACTTTTTGTCAAAAGTTTTAATTGAATTTCCCATTTTAAAAAGGAAAATTGCATCAAATGACAAAAACATTTAGGAAAAATAGTTAATGACACCTATTTTTTTGCATATTGCGAATATGGAAAAATTAGTGATATCCGATGGCTATCAAACGGTAATCATAGGACTATCGGAGGGCTATCAGACGACAATCATAAGGTTATCGACTTTTAAATTTATTTTTTTTGCAATTTAGAAAATGTAGTGACATGGGTCCTATTATCATAAATTTTTTTGCTATTTTTGCAAGGGCCCATTTAAAAAAATGTAAAATAATATGATTAACATTTAAAAATAGAGTTTAAATTAATTAGTTGGTGCTTGTTTAGAGAGGGTACATAAAATATAAGAAGAATCTCTAGATATAAAATTGGGGGTTTTTAAAAATATATAACAAACTTGTCAAATATTTACATGGTATAAAACAATTTTGAAAACAGAAAAAGTTCATAGACACATAATGAAAAATATAAAACATGTCACAGTCAATACGCGATTAATTGGGTCACACACGTGTGTAATCCTTCTTCTAAATGATCATCATACACAATCGTGTAGGCAATAATACACGATCGTGTATATAGTATCAACACCAGCAACACACACACGTGTAATTCTTTTGCTAAATGATCATGATACGCGATCATGTAGAAAATGATACATGATCGCGTACCAAGATCTAAACGATTGTGTACCAACTCTAAATGATCTTGGTTCATGATCTTGTACCAAGATCTTTATATTTGGTACACGATCTTGAACCAATATCATCAATATCGTTTATATTTTGTACGATCATTTAGATTTGTAAGAGGAAATACACGAGAGATGAAGAAGATTGTTTACCAAGTTGAAATATGAAGAAGTGAACAAATGAAGAAAAGAATATGAGAGACGACGAAGGAGGAATAAATTATAGAAGAGGAAATTAATAAATATTCACCAAATCTACAAGTGGGAATACAAGGAAGAAATAAGTATTAATATGAAGTGGGGATGAATAAATCGCAAAAAAAAAAAAAAAGTGAAAAATCATTTGCAATGGGTAAACCTACAATTTAGGAAATATCATAAGTTTTTTTTTTTATTTTTTTTATTTTTTTTTTATTTTTAATCTTGTTATACATGCAATATATATTTTGGTGTTTTGTTATATTTATGAAAAATAACCTAATTAAATTATATTTAATTAATATTGGTCTTTTGTTATATTAAATAAAATTAAACCAAACTATTAATTAATTCTCTAATTAATTAATTGTTAAATTAAATATCTTATATTTGATTTAATCTAAATTTGAATCATATTCAAATATAAATTTCTCTCATAATCTATAGTTTTAATGTGTATCATATACATATTAAATTTTAACCTATAGTTTTAATATGAATCTAATTCACATTAAATTAATATTTGAACCCATTCAAATATTTTATTATTTTATAAATTAATTTTGAATCATATCTAAAATTAAATTTACACTACAAGAATTTTCATATCCAAATATTTGCACCCACTGCTCACATAATTAAATTCACTTGCACTTTCATCTCGACCATTTTGGCCTTTATTGACTATATTCTGGCTCTAAAGTCATTTGACAGATCACTGAACAACTTCAGCATGGTCTTCTGGGAACAATCAAACTCTTCGACACGCTTTTCCATGTGTGCGACAGAACTTGAAGAGCTACTCCTACGTTCAAACTACTAGCTTGAGCGATTTTATGTTTTATCGAATCAACCCACAACGTTAATTCGTTTATAAGTAGTCCGTCTATCTGGGCATTCAACGCATCTATTTCTCCAACTCGTCCAGTCGGGTATGGAGAAATATTACTTTGTTTGACAATTCTCTCAGATACAAGAATTTCTCTTTATTATCAGTTAGTCGTTCAGATTGTGACTTCGACAGTTGTTTAATTGCCAACATAATTGCATCTCACTTAGCCAATGACCTAACAAATCTCTGATACCACTTGTCACAATCGCAACCTTTCGAACATGAGATGAGCGATTGTGCGACACTTGTTCTAACTCTGTGAACAATTCAGCTGTACTAAATTCGAAATTCGCGAGCAAACTCACGGTATGATGTAGCCTCCCTTCACGTTTTGGGATAATTTTTTTTATAAAACGTGAGAAAAAAAGAAAAACATTGAAAACACCATTAAATAAAACATTGAAGGCTGTCAATTACAAATAGTACTACAAGGCTTAGTTAGGGATTCAACTAGTATGTCTCCTCTATAATACATTTTTAGCATTTTCTACTATGATTGACTTGCATATGAAAAGTGTGAAATATCACTTACAAACAAGGAACATGGAAATTAAAGGAAGCAAGCTAAACTAAGTACAAAAACGTAAACATAAGGTGATGTGAAGATGTTTGGACATGCGACCATAGATAACACAACGTCTTGGACAAGCATGTATATGATTAGCAACAATTGTATTATTGTTATTAATTATGCCTTGAAAATATTTGATAATACACATGTTATATACATATTTTTTATACCTTAGGGTTTTGAAGATTGTTGAACAAAATTTAAATTCAAGTGTATTAACGAAGCATTTTTAAAATGTAGAGGTATTTTTAAAATTAATGTATTCTCTCTAGTTTAACAAAACATTTTGGGGCGTTTGACGAGCAGGTTCATAATCAAATGCTCAAAAATTATAAACGTTCGTGTTTGAGGTGCAGAATTTGAAAATCTAAATTATTTTCGATGTTTGTGTTTGAGATCTAATTTTGAATTCTTAGGTTTACCTAATCTATTTAGTTTTTTTAAAAAATTGTACATTCTAAATTTATCACGTAACAAATTTTTTATTGATTTTTTTTATATATTTTTCTAATTGATTTTAATTTTGATTACAATTGTATTGTCTAATTAAGAATATTATAAACCATTCACAAAATATAATAAGTCATGGGATCGAAAGGGGTTTATGAAAATTCCAGTTAAACAACAATAAAGAGGGTCTAATAGGATTCAAAATAAGCATAACCAAAAAGGTTATGCAAAGGTCATGCAAAAACAAAAGTTAAATAGAGTTACATTTAACCATAGTTATGATTGTCTTTCTATGATAGGCATTATGCAATGCATTTTAAAAAAACATTTATGAAAAAAGTTCAAATAAAACTGTGTTTTTTTTTAAAACACTTTTTTCTTAAGTTGATCCAAATAGTACAAAATCTTATAGTTAAATTGATAAACAAAAAAAGAAAAATAATAATAAACTAAAAATAAGTCAGGGTATATGTGATATATATTTAGAATTTCTATTATATTACCAATATATTAATATTTGATTTATACTTGACATTGCAATATAGATAAATCATCAATTTTCACTTACAAAAAATATAATAAATTAAAGAAAATCTCCTAAAACGAAGGAAATATTAATTTTAAACAAAAAAAAAAGAGAAAAAAGATAATTACAAAATTATCTCGTAATTATTATTATTAAAAAACTCTAGAAGAAAATAAACTAAAAAATGTGTATTTTAAAAATATTATTGTGATTAAATCAAAGACGTATTTAATATAATGACTCAGAAAAAAAAAGTTTTTCAAAAATGTATTTTTCTTAAATTTTCAAGGTTTGCAGCGATGGTTGGAAGTTTGCCAACAGAGTTGTAAAAAACAACACCCAATGGTCGGCCGACAATGGTTAGCATAGTTGGTGTCAACAAATTTTCTATTCAAATCCACGAGAAAAAGTGTAGGAAGCTCTGGTGAAGACCATCGTTGATCAATGGTGAAGGCTGTCGTTGGTGAAGACCATCGTTGATCAATGGTGAAGGCGGTCGTTAATGTTTAAGACGATTGGTTGATCGTGACCATCGTGACAATCGGTTGCTAAGGTCATGGCTATTGGTCATTGTCATCTCACTACTACGGTTTGTTAATAGGCATGATATTAATAATTAACAACAACGATTGGTCGCCGTCGATCAAGATGTTCACTCGACGATAGTAACACGAGTAGTTGTAGGTCACCAAGGATCAAGATGATTGGTCACCAACAATCGATAATCGATGATTAAGACGATTTGAAGGTGACAATTAAGATGATCCGGAGTCGATGGTTAAGACGATCGACCGTGGTTAGTTTTTTAATAGAAAGAATTTTATTGTCCAAACATGAGTTTGACACACCCCTAATTTCAAACCCATGGCCGGACACTCCCTTTAAACCATCCTATCTTTTCTTTCTAAACCCTATTCACCGTTCGGCAAAACCCTTCCCGTCCCTTTAGTCGCCACTGCCGCCGCCGCCGTCTCAACGGCTGCTTCCGCCCCGATGAACTCGCTGCCGCGCCCTCCCTTTCACACTCCCTCGTCTCTCCAAGAAATCAGAATTACTTATCGTCGTTGTTCTTTTTTTTCTTTCTCAGAAACAAAAAAAAGTGGTTCAGCCCTTAAACCGCGCCGTTGGTGAGATCGCGCTGACACTCACTTGCACTGCCGCTCATTTTCAGCTATCGAACATTTTGATTTTATGGTTTTGTTTCATTGAGTTACAGAGAAGAACTTGCACAAAATTTCAAACCACAAACTGATTTAATTTTTTCCGTGTATGTCTGATTTGAAATACTTCCAAATTCAGGGGTTCCAAGCGGGCGTTAACTTTTCTGCTCTCTCTAGCTTCGATCACCATTGTATATTTTTCTCATGTTGCGTTGGAAGACAAGAAAGTTGAACTTTTTTGGCAATGATATGGAGATATGGCTGTAATATCTTCCAAATAGCATCTCGTCAAATCATCAGAACATTTGCTCGTCAGTCATATCGTCGATGTACAACCCCACATATAAATTTAACCAAAATCCTCCACAACCGACTAGACGAAGACATTGAACAGAAATTTTCTAAGAACAGGCAAGTGATTCTCACTAATGATCTCGTGTACACCACTCTGTTGAATTGTTCTTCTGATTTAATCGCTTTGAGCTTTTTCATGTGGTGTGCTAAACAGCCCAATTTCTTCCACAACCCTGCGGCGTTTGATTATATGGTGGGTGTGGTTTCCCGTCTCATGAAACAATATGAAACTGTGAATGGGATTCTTGGGGGGTTGGAGAGTGTTGGTAATGTGACTAAGGCACAAACGTTTCTGCTTCTTTTGAGGATTTATTGGCGTGGAGGAATGTACGATTTGGTTTTTGAAGCATTTGACCATATGGATCACTATGGATTTACACCAAACACATTTGCGCGTAATGTGATTATGGATGTTTTGTTCAAGGTTGGACGTGCTGATGTTGCTTTGAAGGTCTTTAAAGAGACACTGCTACCAAATTTTTTGACATTCAATATTGTATTGTGTAATTTATCCAAAACAAAGGATTTGATAGGTATTGGAGATGCTTTTAGATGTATGTTGAGAATGGGGTATTGTCCTAATCCTGGGACATTTGAAGTGGTTTTGAATGGTTTATGCAAATTAGGTAGGCTGGCAGAAGCATATCAAGTATTGGGTATAATGACAACTTTTGGAATATCCATGTCCGTAAACATTTGGACTATAATGATTGATGGATTCCGTAGATTGCACAGAACCGATGAAGCTTCTTCTTTGGTGAAAAAGATGAAAAAATCTGGTTGTTCTCCAAACATTGTGACATATACTACCTTGATTAAGGGATATATATATGCACAACAGGTTAGTGACGCATTTGATGTTTTAAGTATTATTGAATCAGAAGGGCCTTCTCCTGACCTGATTCTTTATAATGTATTGATTGATAGCCTTGCTAAGAATGAGAGGTACAATGATGCTCTCAGTATTTTTCTTAGTTTGCATAAACGAAACATACTTCCTGACTGTTATACTTTCAGTTCATTGTTGAATACCATATGTTTATCCAAAAGGCTTTTTCTTCTACCCAAGTTGGTTGATGAATTTTTTGTTGAAGTTGACTTGGTGGCATGTAACTCTCTGCTTAGTTATCTTGGTAAGGCTGGGTTTGCTGCACTTGCCTTAGAACTATATGATAACATGGTGAATGGAGGTTTAATGCCAGATAAGTATAGTGTTCTTGGAGTACTGACTGGTCTTTGTGAATCAAGGAGAATCGGTGAAGCAGTTCGTCTTTACAATGGCATTCTCTTGAACTATACAGGAGTTGATGCTCACATCCACACTGTAATTATAGATGGACTTATAAAAGCTGGTAAATTTCATTCAGCCATTAGGATATTCAGAAGAAATTTATTGGAGGAAAATTCTTTAGATGTTGTATCATATTCTGTTGCCATTCGTGGGCTTCTTCTGGTCGGTAGAAATACAGAGGCTTCTAACTTGTATAACTACATGAAGGAGTCTGGAATAAATCCAAATGGGCATGTTTGCAACGTAATGCTCTCGACTTTTTGTAAAGAAAAAAAATTTGCATTAGTGAAGCAGATGCTGCAAGAGATGATTGACCTGGGAATAAAAATGAGCAGGAATAATTTCTTTAGGTTATACAATGCCATTTGTAGATCATCAAATGGTTCTCATCTGGTTATCTACTTATTAATTGAGATGAAAGTTTTGGGATTATTACCTAGGAGACGGGATTGTGAAACATTGGTTCATAATCCCCCCAAAGATGTGAATATTTCTGAAAAACATTATAAATTATTGAATGGCTGTCTAGAATATTGTCTATGTGGTGATACATCTAGCTCCGAAGAATATACTGATGTGGCTGCTTTTGTGGGCTGAGTTTGTCTGTGGAAGAAAGTCAATTTTCAAAATGATGGTTCAGCTGCTATTTTTGGCAATCTAGAATGCATTCGAACATATCTCAAGCAATATAAAGGTACAGCAGCTGAAAGCTTCATCCTTGTGGAACATTTTGTATTTTGACTTTCCCTTACTGCTCTGGATTTCTGATCTTTAGACAAGAATTAATGCACCTGAAACAATGCAGTTCTTTGTTCCCTTTTTCTTTGACAGTAAGATGTTAAAGTAGTTCTACATGTGATATTTTGACTTTCTTATGAACATCTATCATACTTTTGAAATAATAAAATTGGTTTATGACATTAAGTGAGCTCAGGCGCTGTAACAATTGATTTATAACAAATGATTCGAATCTCTTTAAATTTTTAGTACCAGATATAACATACTGAGTTCCTCTTTCTTTGCTTTGTACTTGGAATTAGAAGTTGCTTTAGCCAATTTTAATCAATGAGACCTGTATCTCGATTTCACACCTTTTTCTGAAGAGAAGAAAATTATTTAGAAATGGTATATGATCATGGTTTTAGATGATTTGTTTATTGGTTAATTTTAGTTTAGTTTTTAATTAGTAGTTTGAAGTTAATTAGCTATTCCTTATTTTTGAAAGACTTGAAATAGCTAATTGTGGGAATTGTAGAGCGGCTTTCTGAATCATATTTAAAACTAGAACTTTGTTCTAGAGAGTTCTTTTGCAACTTGAAGGGTGAATTTCCCTTTTTTGGTCATGAATTCCTAATTGAATAATCCCCAAAGTTGTTGCAT

mRNA sequence

AATTAACTATACAAATTTAAAGATTTGAAAGTTGAAAAGTTGTAACATTTTTTTATAGGCTTCCTTAATTTTTTTTTCTACCAACATTGTAGAAATTTGGATCCATCCAATGAATTGTATAATGGGACAAGATTGGTATGTCGATCATTTAGCAAAAATATTATACATGCTGAAATATCAATGGTGATCATGCACGGAGTTTTTCTTCCATGAATATCGTTAAGCCCACCAAATGACAATGAATATTCATTAAAGTTCAAGATAAAACAATTTCCAATTCCCCGTTTGTTTATGCTTTGCAATGATAGTTAACAAAATACGATGACAAACAATTCCTAATGTTGGAATTTGTTGCAT

Coding sequence (CDS)

AATTAACTATACAAATTTAAAGATTTGAAAGTTGAAAAGTTGTAACATTTTTTTATAGGCTTCCTTAATTTTTTTTTCTACCAACATTGTAGAAATTTGGATCCATCCAATGAATTGTATAATGGGACAAGATTGGTATGTCGATCATTTAGCAAAAATATTATACATGCTGAAATATCAATGGTGATCATGCACGGAGTTTTTCTTCCATGAATATCGTTAAGCCCACCAAATGACAATGAATATTCATTAAAGTTCAAGATAAAACAATTTCCAATTCCCCGTTTGTTTATGCTTTGCAATGATAGTTAACAAAATACGATGACAAACAATTCCTAATGTTGGAATTTGTTGCAT

Protein sequence

N*LYKFKDLKVEKL*HFFIGFLNFFFYQHCRNLDPSNELYNGTRLVCRSFSKNIIHAEISMVIMHGVFLP*ISLSPPNDNEYSLKFKIKQFPIPRLFMLCNDS*QNTMTNNS*CWNLLH
Homology
[Close]
BLAST of Chy12G210030 vs. ExPASy TrEMBL
Match: A0A6J1DFU4 (ATP-dependent DNA helicase OS=Momordica charantia OX=3673 GN=LOC111020055 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.1e-12
Identity = 46/83 (55.42%), Postives = 53/83 (63.86%), Query Frame = 0 

Query: 31  RNLDPSNELYNGTRLVCRSFSKNIIHAEISMVIMHG--VFLP*ISLSPPNDNEYSLKFKI 90
           RNLDP+N L NGTR+VCR F KNII+AEI+     G  VFLP I +SP ND  Y  KFK 
Sbjct: 214 RNLDPANGLCNGTRMVCREFRKNIIYAEITTGQNAGKQVFLPRIPMSPANDEGYPFKFKR 273

Query: 91  KQFPIPRLF-MLCNDS*QNTMTN 111
           KQFPI   F M  N +   T+ N
Sbjct: 274 KQFPIRLCFAMTINKAQGQTIPN 296

[Close]
BLAST of Chy12G210030 vs. ExPASy TrEMBL
Match: A0A6J1E1J0 (ATP-dependent DNA helicase OS=Momordica charantia OX=3673 GN=LOC111025574 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.1e-12
Identity = 46/83 (55.42%), Postives = 52/83 (62.65%), Query Frame = 0 

Query: 31  RNLDPSNELYNGTRLVCRSFSKNIIHAEISMVIMHG--VFLP*ISLSPPNDNEYSLKFKI 90
           RNLDPSN L NGTR+VCR F KN+I AEI+     G  VFLP I +SP ND  Y  KFK 
Sbjct: 142 RNLDPSNGLCNGTRMVCRKFQKNVIDAEITSGQHAGKQVFLPRIPMSPANDEGYPFKFKR 201

Query: 91  KQFPIPRLF-MLCNDS*QNTMTN 111
           KQFPI   F M  N +   T+ N
Sbjct: 202 KQFPIRLCFAMTINKAQGQTIPN 224

[Close]
BLAST of Chy12G210030 vs. ExPASy TrEMBL
Match: A0A6J1E0L4 (ATP-dependent DNA helicase OS=Momordica charantia OX=3673 GN=LOC111024833 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 3.1e-12
Identity = 41/65 (63.08%), Postives = 47/65 (72.31%), Query Frame = 0 

Query: 31  RNLDPSNELYNGTRLVCRSFSKNIIHAEISMVIMHG--VFLP*ISLSPPNDNEYSLKFKI 90
           RNLDP+N L NGTR+VCR F KNII+AEI++    G  VFLP I +SP ND  Y  KFK 
Sbjct: 180 RNLDPANGLCNGTRMVCREFRKNIIYAEITVGKNAGKQVFLPRIPMSPANDEGYPFKFKR 239

Query: 91  KQFPI 94
           KQFPI
Sbjct: 240 KQFPI 244

[Close]
BLAST of Chy12G210030 vs. ExPASy TrEMBL
Match: A0A494G9F1 (ATP-dependent DNA helicase OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 5.3e-12
Identity = 41/83 (49.40%), Postives = 51/83 (61.45%), Query Frame = 0 

Query: 31  RNLDPSNELYNGTRLVCRSFSKNIIHAEISM--VIMHGVFLP*ISLSPPNDNEYSLKFKI 90
           RNLDPS+ L NGTR++CR FS+N++HAEIS        VFLP I LSPP +  Y  KF  
Sbjct: 569 RNLDPSSGLCNGTRMICRGFSQNVLHAEISTGHSATKHVFLPRIQLSPPENEGYPFKFIR 628

Query: 91  KQFPIPRLFMLCNDS*QNTMTNN 112
           KQFPI   F +  +  Q    +N
Sbjct: 629 KQFPIRLCFAMTINKAQGQTIHN 651

[Close]
BLAST of Chy12G210030 vs. ExPASy TrEMBL
Match: A0A1S3ZCE5 (ATP-dependent DNA helicase OS=Nicotiana tabacum OX=4097 GN=LOC107785256 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.2e-11
Identity = 41/83 (49.40%), Postives = 51/83 (61.45%), Query Frame = 0 

Query: 31  RNLDPSNELYNGTRLVCRSFSKNIIHAEISM--VIMHGVFLP*ISLSPPNDNEYSLKFKI 90
           RNLDP+N L NGTR++CR F  N+IHAEI M       VF+P I LSPP +  Y  KF  
Sbjct: 142 RNLDPANGLCNGTRMICRGFDNNVIHAEIMMGENASKHVFIPRIQLSPPENEGYPFKFIR 201

Query: 91  KQFPIPRLF-MLCNDS*QNTMTN 111
           KQFP+   F M  N++   T+ N
Sbjct: 202 KQFPVRLSFSMTINEAQGQTIPN 224

[Close]
BLAST of Chy12G210030 vs. NCBI nr
Match: XP_022159149.1 (ATP-dependent DNA helicase PIF1-like [Momordica charantia])

HSP 1 Score: 82.4 bits (202), Expect = 4.58e-16
Identity = 46/83 (55.42%), Postives = 52/83 (62.65%), Query Frame = 0 

Query: 31  RNLDPSNELYNGTRLVCRSFSKNIIHAEISMVIMHG--VFLP*ISLSPPNDNEYSLKFKI 90
           RNLDPSN L NGTR+VCR F KN+I AEI+     G  VFLP I +SP ND  Y  KFK 
Sbjct: 142 RNLDPSNGLCNGTRMVCRKFQKNVIDAEITSGQHAGKQVFLPRIPMSPANDEGYPFKFKR 201

Query: 91  KQFPIPRLF-MLCNDS*QNTMTN 110
           KQFPI   F M  N +   T+ N
Sbjct: 202 KQFPIRLCFAMTINKAQGQTIPN 224

[Close]
BLAST of Chy12G210030 vs. NCBI nr
Match: XP_022158321.1 (ATP-dependent DNA helicase PIF1-like [Momordica charantia])

HSP 1 Score: 81.6 bits (200), Expect = 8.21e-16
Identity = 41/65 (63.08%), Postives = 47/65 (72.31%), Query Frame = 0 

Query: 31  RNLDPSNELYNGTRLVCRSFSKNIIHAEISMVIMHG--VFLP*ISLSPPNDNEYSLKFKI 90
           RNLDP+N L NGTR+VCR F KNII+AEI++    G  VFLP I +SP ND  Y  KFK 
Sbjct: 180 RNLDPANGLCNGTRMVCREFRKNIIYAEITVGKNAGKQVFLPRIPMSPANDEGYPFKFKR 239

Query: 91  KQFPI 93
           KQFPI
Sbjct: 240 KQFPI 244

[Close]
BLAST of Chy12G210030 vs. NCBI nr
Match: XP_020245331.1 (ATP-dependent DNA helicase PIF1-like [Asparagus officinalis])

HSP 1 Score: 80.9 bits (198), Expect = 8.25e-16
Identity = 43/79 (54.43%), Postives = 52/79 (65.82%), Query Frame = 0 

Query: 28  QHC-----RNLDPSNELYNGTRLVCRSFSKNIIHAEISMVIMHG--VFLP*ISLSPPNDN 87
           +HC     RNLDP+N L NGTR+VC+ F+ NIIHA+I+M    G  VFLP I LSP  D 
Sbjct: 143 KHCPIILLRNLDPTNGLCNGTRMVCQDFNCNIIHAKITMGQHAGKEVFLPRIPLSPAEDE 202

Query: 88  EYSLKFKIKQFPIPRLFML 99
            +S KFK KQFPI   F +
Sbjct: 203 GFSFKFKRKQFPIRLCFAM 221

[Close]
BLAST of Chy12G210030 vs. NCBI nr
Match: XP_022152307.1 (ATP-dependent DNA helicase PIF1-like [Momordica charantia])

HSP 1 Score: 82.4 bits (202), Expect = 9.29e-16
Identity = 46/83 (55.42%), Postives = 53/83 (63.86%), Query Frame = 0 

Query: 31  RNLDPSNELYNGTRLVCRSFSKNIIHAEISMVIMHG--VFLP*ISLSPPNDNEYSLKFKI 90
           RNLDP+N L NGTR+VCR F KNII+AEI+     G  VFLP I +SP ND  Y  KFK 
Sbjct: 214 RNLDPANGLCNGTRMVCREFRKNIIYAEITTGQNAGKQVFLPRIPMSPANDEGYPFKFKR 273

Query: 91  KQFPIPRLF-MLCNDS*QNTMTN 110
           KQFPI   F M  N +   T+ N
Sbjct: 274 KQFPIRLCFAMTINKAQGQTIPN 296

[Close]
BLAST of Chy12G210030 vs. NCBI nr
Match: XP_015167741.1 (PREDICTED: ATP-dependent DNA helicase RRM3-like [Solanum tuberosum])

HSP 1 Score: 82.4 bits (202), Expect = 1.93e-15
Identity = 45/83 (54.22%), Postives = 51/83 (61.45%), Query Frame = 0 

Query: 31  RNLDPSNELYNGTRLVCRSFSKNIIHAEIS--MVIMHGVFLP*ISLSPPNDNEYSLKFKI 90
           RNLDPSN L NGTRL+CR F KNIIHAEI+        VF+P I LSPP +  Y  KF  
Sbjct: 502 RNLDPSNGLCNGTRLICRGFDKNIIHAEITTGQYATKQVFIPRIQLSPPENEGYPFKFIR 561

Query: 91  KQFPIPRLF-MLCNDS*QNTMTN 110
           KQFPI   F M  N +   T+ N
Sbjct: 562 KQFPIRLCFAMTINKAQGQTIPN 584

The following BLAST results are available for this feature:
BLAST of Chy12G210030 vs.
Match NameE-valueIdentityDescription
BLAST of Chy12G210030 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DFU41.1e-1255.42ATP-dependent DNA helicase OS=Momordica charantia OX=3673 GN=LOC111020055 PE=3 S... [more]
A0A6J1E1J01.1e-1255.42ATP-dependent DNA helicase OS=Momordica charantia OX=3673 GN=LOC111025574 PE=3 S... [more]
A0A6J1E0L43.1e-1263.08ATP-dependent DNA helicase OS=Momordica charantia OX=3673 GN=LOC111024833 PE=3 S... [more]
A0A494G9F15.3e-1249.40ATP-dependent DNA helicase OS=Solanum lycopersicum OX=4081 PE=3 SV=1[more]
A0A1S3ZCE51.2e-1149.40ATP-dependent DNA helicase OS=Nicotiana tabacum OX=4097 GN=LOC107785256 PE=3 SV=... [more]
BLAST of Chy12G210030 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022159149.14.58e-1655.42ATP-dependent DNA helicase PIF1-like [Momordica charantia][more]
XP_022158321.18.21e-1663.08ATP-dependent DNA helicase PIF1-like [Momordica charantia][more]
XP_020245331.18.25e-1654.43ATP-dependent DNA helicase PIF1-like [Asparagus officinalis][more]
XP_022152307.19.29e-1655.42ATP-dependent DNA helicase PIF1-like [Momordica charantia][more]
XP_015167741.11.93e-1554.22PREDICTED: ATP-dependent DNA helicase RRM3-like [Solanum tuberosum][more]
BLAST of Chy12G210030 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy12G210030.1Chy12G210030.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006974 cellular response to DNA damage stimulus
biological_process GO:0051276 chromosome organization
biological_process GO:0006259 DNA metabolic process
molecular_function GO:0004386 helicase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0000166 nucleotide binding