Chy12G209670 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G209670
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH12: 4165652 .. 4170055 (+)
RNA-Seq Expression	Chy12G209670
Synteny	Chy12G209670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGCAAAAATTCAAACAATAAAGACACATTAAGTATAAGTAAACAACAAGAAAAATAAAATCATACTTTACCTTCTAAACTCATCATTGTTGCCAAGAACATAAAGAGCAATTACAACACATTCCAAACGGTTGAATATAACAAAAAACAGAAATCAAGAAGAAATATTGGGAGAGTTAGAATAAAAAAAAAACTCAATGATAGAAAATGAAATTAAGAACAAATTAAAAGGGGTTTATATTTAGGATTTTAAACTTTGAATTACCTCCAACCAAGAGGTTGTGACAAAGACGAAGATGGAGGGAGTGGCGGCGACGGACGGCAACGGACGAATGACTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGGTCTCTTCCTCTTTTCCTTTCGATTTGAGTTCTATGTTCTGTGAATACATAACTCAAATATGTAGGCGATCTACCGAAGCACTTCGTGAACGACAAGGGATCCACCTGTTCTCGATGCCGTAAAGTAAAATGTCAGAAAACGTGTCCTCCATTTATGACATTTCACTTATGACGTCCGGAGTGGTTGACACATCTCTAACATGTGTTATCATGGTGTCAGAAATAATTAAAAAATAAAATAGTAATATCTCTTTTCTCGACCCCATGAACATTACTATGGACGTCATGATAACACATGTTAGAGATAACACATGTTAGAGATAAATTAAAAAATCAATTTTGGCGCAAATCCTAACTAAACGGTAGGAACAATACTCTTTATTAACACATGTTAGTGGACCATTCCCGACGTCTAAACGTAGACGTTGGGAATGGACTTCTCCACCGACGCTTGCCTAGCATCATTGAGAATTGTGGGACATTCCCGACGTACGTTTCGTCAACTCCCATTTCGACATCAAGAATGCCCCAATTTCTTGTAGTGAGACTTCAACACGATAATGATGCAAATTTGTAATTTGTTGAGATTTTCAACTTTTTCGTCCTCGAACTAAAAACATAGCATCCATTTTAAGAACTTCAATGTCATGACTATTGCAGAAATTAGAAACCCTTTCCAATAATGAATCCCAACTAGACTCTCTCGTTGATTGCAGTCTACCTTTACAAAAAGTTGACTAAATTCATTGCATTCACAATATCTTGATCTTTTCTTTGTAAGACTTGAGACAAGTCATTTGTGATTTCCAATATATTTATCATGAGATGCATATTGAAAACAAAGTCAAATGATTAGAATTTGTGCTTCATATTTTTGTTCTCAATTTGATCCATTGTGCACAATTGTCTCAAGCACATCATTTTCTTTCAAAATAAGTGCTTTCAAGCCATGGAACTTACCTTGCATATTACTTGCTCCATCATATCCTTATCCTCACAAATTAGGAATACTTAACTCATGTTGAGAAAATAAAAACCATCAATAGCTTCCTTACGTGATAGGGCACTTGTATTATTGACATGGATGATTCCAACAAATCGTTCAATTACATGACCTTCATCTACATATCATAGTACAACTGACATTTGCTCCTTTGAAGATAATCTTTTCATTCGTCTATCAAGATAGAAATTTGGTTGTCACTCACATCTCTTATAACTATATTAACAATTTCTGTTGCAATATAATACAGTTCACTATATCCTTTGGAATATCATGTGCAATCAATTTCAAATTATTTGGATCATTTTTCAAAGTCACGGCTTCAATATCCTTGTTATAGTTGCACAACCATTGCAATAGTTCAAGAAAGTTACCTTGATTCTTCGAATCATCAGTCTCATAATGTCCACGGAATGCAAAACCTTGTAATAAAAATCGAGTACAATGAATTGATGCGCCTAATCGATTTCGATACTCAACTCGTGCTTGGTCAGACATCCTACTTAAAAAAAGTCTCAATATGTTGCTTTTTTTTTAAAAGAGCCTCACATTTTCCCCAAGCTTGATTGTGTGCACTATTTAGACCACCAACATGAGTTTGCAATTTCTCTTTTTTTTTTTCAATTGGAAAATTCTTCACTAACTAAACATTCATTTCTTGATTCTTCACTTACTTCTGGTTTGAACCGGTAGCAACATATAAACAAAATGCAGCATCCTTTGGAATGTTATATTCTAACCAATTAGGATATTCTTTAAACCAATCTAGATTAAATCGTCTTGACTTTGCCCCAAATTTCTTGAATGGAAAAGTATGATTTCGAGGTTGACAATGACCTTTTTGTAGATATGTTCTACGAGTTAATTGATATGATACTTATATTCTAACGATGAATGGAAAAAAACTATCTTGTATCCTTTAATTCTGAAATAAAATAAAATAAATATATACATAAGTAATGTAAATATGTGGATTTAAAAATTGCATCAAAAAAAGAAAAAAGAAAGAATAATATTTTTTTCCTTGGAATATTGTTGAGAGAGTGGAAATTTGGATCATCGACTTTGTTGCAATTTTTTTTAATATTTGTTAGCTATAGATAACAAATGAGGGCTAGAAAATAAGGTAGGGTTTTTATCTAAAATAGGGTTTTTGCTTTTATAAAAAATTATATTCCTCTGAGAAAATCATTGAAATTTAGGAAGGGGTTCAGGTATAACCACTGCACCAGAACCAAAATGTAGTAAAAATAAAAGCATTATTTAATATATATTGTAATCTAACACTTCAAAATTAATATTAAAATACAAAAATCGAGAATAATGTGAGGGGGGCGCATACCCCATAGCCCTTTAATAAATTTGCCCCTAGTTCTATTGATTTAGTGGAAACTACATTAAACTTCTAATTCGGTTTTCTTATTAGAAATTTATCCTAGCGTAATCCATTAAGCTTAATACAGTTACTTAAATTGATTAGGATGCTTCTCATTTAATTAAGTTGGCTAATTTGATATTTAGGACCACTGGTTAGCTTTTTTAATCAATAGGACTAAGGAGTACTTAAAGATCATACCTGGATTATTTGATGATCAAAATTACGGTGGGCGAGTCAATTCCTCCGAGCTAGAACGTTTTGTTTGCTTGCATTCTATTATTTACTTTCACATCTTTACTTTTATGCACATTCGAATCTCAAACCACATGAAACTCCCTACATTTGTCACTTTAACTAAAAAATTAATTCTCCAATTGATTAATTACCAAGTCAAGCATCACATATTTAAATTAATTTACAATTTGAATTGTTTTCAAATGTATCTCTCTCATAACCTATAATTTTGATGTGTACTATGTACACATTAAAATTTAGCTTACAATTATTTAATTTTCATTAAATTATTATTTAAACTCATTCAAACATTTTATTCTCTCATAAATTAATTTTGAATCATATCCGAATTAAATTTATATAATAAAGTTTAACTAAAATATAAATTTTATATCATAATGTATTATCATACGTAATATTAATTCCCTAAGTGAATTTGAACATTTCAAACTACAGTTAATATATACTAAACAATAACCACAATACCCTACGAGCTAGGAAGAGAAATTATTGGACCTACGGATCATAAGCTACGACGATATGAGATTAATTACTAACTCATTAACCACATTAATTAATATTCGTTTATTGTGTATACGCTCCATTAAAGACTCACAGATGAACTTTTCTCACTGTAGATATATTTTTGTATTCACAAAAATAGACCAATAACAACAAATTAGCCTTTCATGAATGTTCGTAATACTAGTTGGATCAAATTACCGTTTTACCCCTGAGTTACTTCTTCGTTCTTAAATATTAGTACTTCTCTAATGAACATGTTTATAGTCCAACCAAGAAACAAAAATCCTTCTTTTGCATATAGAAAGTGGAGTCCTTTGTTTAAGTCTCGGAGACACCATTTAAGCAAGCACTCATCTACTTATCTTAAAGTCTGGAATGAGTGAATTTCATCTTGTATGATTATGTTCCAAGTTCCTACTTGATCTTTTCCTTAAAATTGTAGGCTTATTGAACTGCAATTTAGTCATTCTCACTTATATAAATTAAAAGACAATCCCTCACGAACAGGAGTTCATAATACAGTCAAGATTAAAACTAAGTTACTTTGGTCATCCTAATGAAATAGAAATCTAACTAGTTAATGAAGTTGCATCTACTAGTTACTTTTTCGTGACCCAATCTTATACAAATTCATTGCATATGATACCTCCACTTGGATGTCAGCTACACGAACGTGTTGGATCATTGTGTTTGTATCAAATACAAAGTAAATTGTATTTAAAGTGTTACTAGGATAAGGCACTCAGTCTTATTCCTATACTACAGATCATTTAAGTTGTATCTTGTATATTGATTTATGTATGGCTTTACACACCATTCAAAACTCATAAAGCAACTTAGGGCGTTAGTTTATTGGATTTAAGTTATTAAGACAAAACTAACTAGAATAATAA

mRNA sequence

TATGCAAAAATTCAAACAATAAAGACACATTAAGTATAAGTAAACAACAAGAAAAATAAAATCATACTTTACCTTCTAAACTCATCATTGTTGCCAAGAACATAAAGAGCAATTACAACACATTCCAAACGGTTGAATATAACAAAAAACAGAAATCAAGAAGAAATATTGGGAGAGTTAGAATAAAAAAAAAACTCAATGATAGAAAATGAAATTAAGAACAAATTAAAAGGGGTTTATATTTAGGATTTTAAACTTTGAATTACCTCCAACCAAGAGGTTGTGACAAAGACGAAGATGGAGGGAGTGGCGGCGACGGACGAATAATAA

Coding sequence (CDS)

TATGCAAAAATTCAAACAATAAAGACACATTAAGTATAAGTAAACAACAAGAAAAATAAAATCATACTTTACCTTCTAAACTCATCATTGTTGCCAAGAACATAAAGAGCAATTACAACACATTCCAAACGGTTGAATATAACAAAAAACAGAAATCAAGAAGAAATATTGGGAGAGTTAGAATAAAAAAAAAACTCAATGATAGAAAATGAAATTAAGAACAAATTAAAAGGGGTTTATATTTAGGATTTTAAACTTTGAATTACCTCCAACCAAGAGGTTGTGACAAAGACGAAGATGGAGGGAGTGGCGGCGACGGACGAATAATAA

Protein sequence

YAKIQTIKTH*V*VNNKKNKIILYLLNSSLLPRT*RAITTHSKRLNITKNRNQEEILGELE*KKNSMIENEIKNKLKGVYI*DFKL*ITSNQEVVTKTKMEGVAATDE**

Homology

The following BLAST results are available for this feature:

BLAST of Chy12G209670 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G209670 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G209670 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G209670 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 47..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G209670.1	Chy12G209670.1	mRNA