Chy12G209530 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCCACTTCTCGATTGGCCAGGTTTATCAGCGAAGCTTGCCCACCTCAATTCATCTCTGTCATGAGGCGAAGAAGCCCCAAAGTTTTAGACACCATTAACGAAGAAGACCAAAGAGAAGCCCTAGCTTCCTCTTCCTCCTTCAAGATCGACAAATTCTCTGTTCCTTCACCGCCATCTCCTGATTCTTCCGCCGCCGCCATTAATTCCAAATACTTTCTCGATCAGGTCCCTGTTCCCCTGAGGCCTTTCTCCATTTTCGAGCATTGA ATGGCAGCCACTTCTCGATTGGCCAGGTTTATCAGCGAAGCTTGCCCACCTCAATTCATCTCTGTCATGAGGCGAAGAAGCCCCAAAGTTTTAGACACCATTAACGAAGAAGACCAAAGAGAAGCCCTAGCTTCCTCTTCCTCCTTCAAGATCGACAAATTCTCTGTTCCTTCACCGCCATCTCCTGATTCTTCCGCCGCCGCCATTAATTCCAAATACTTTCTCGATCAGGTCCCTGTTCCCCTGAGGCCTTTCTCCATTTTCGAGCATTGA ATGGCAGCCACTTCTCGATTGGCCAGGTTTATCAGCGAAGCTTGCCCACCTCAATTCATCTCTGTCATGAGGCGAAGAAGCCCCAAAGTTTTAGACACCATTAACGAAGAAGACCAAAGAGAAGCCCTAGCTTCCTCTTCCTCCTTCAAGATCGACAAATTCTCTGTTCCTTCACCGCCATCTCCTGATTCTTCCGCCGCCGCCATTAATTCCAAATACTTTCTCGATCAGGTCCCTGTTCCCCTGAGGCCTTTCTCCATTTTCGAGCATTGA MAATSRLARFISEACPPQFISVMRRRSPKVLDTINEEDQREALASSSSFKIDKFSVPSPPSPDSSAAAINSKYFLDQVPVPLRPFSIFEH* Homology
BLAST of Chy12G209530 vs. ExPASy TrEMBL
Match: A0A0A0LYE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534780 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 3.0e-39 Identity = 86/90 (95.56%), Postives = 88/90 (97.78%), Query Frame = 0
BLAST of Chy12G209530 vs. ExPASy TrEMBL
Match: A0A5A7UJX7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00970 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 3.1e-36 Identity = 84/92 (91.30%), Postives = 87/92 (94.57%), Query Frame = 0
BLAST of Chy12G209530 vs. ExPASy TrEMBL
Match: A0A314XQS6 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_10926 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 5.3e-12 Identity = 52/101 (51.49%), Postives = 63/101 (62.38%), Query Frame = 0
BLAST of Chy12G209530 vs. ExPASy TrEMBL
Match: A0A5E4FYK5 (PREDICTED: galactosyltransferase family OS=Prunus dulcis OX=3755 GN=ALMOND_2B011231 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 9.0e-12 Identity = 51/99 (51.52%), Postives = 63/99 (63.64%), Query Frame = 0
BLAST of Chy12G209530 vs. ExPASy TrEMBL
Match: M5WKN5 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G084800 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 2.0e-11 Identity = 52/99 (52.53%), Postives = 63/99 (63.64%), Query Frame = 0
BLAST of Chy12G209530 vs. NCBI nr
Match: KGN65872.1 (hypothetical protein Csa_023250 [Cucumis sativus]) HSP 1 Score: 170 bits (430), Expect = 5.78e-53 Identity = 86/90 (95.56%), Postives = 88/90 (97.78%), Query Frame = 0
BLAST of Chy12G209530 vs. NCBI nr
Match: KAA0054015.1 (hypothetical protein E6C27_scaffold318G00710 [Cucumis melo var. makuwa] >TYK20701.1 hypothetical protein E5676_scaffold480G00970 [Cucumis melo var. makuwa]) HSP 1 Score: 160 bits (404), Expect = 5.69e-49 Identity = 84/92 (91.30%), Postives = 87/92 (94.57%), Query Frame = 0
BLAST of Chy12G209530 vs. NCBI nr
Match: KAG7019500.1 (hypothetical protein SDJN02_18461, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 117 bits (293), Expect = 2.19e-31 Identity = 67/89 (75.28%), Postives = 73/89 (82.02%), Query Frame = 0
BLAST of Chy12G209530 vs. NCBI nr
Match: KAG6583880.1 (hypothetical protein SDJN03_19812, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 107 bits (268), Expect = 1.06e-27 Identity = 60/75 (80.00%), Postives = 63/75 (84.00%), Query Frame = 0
BLAST of Chy12G209530 vs. NCBI nr
Match: PQP93653.1 (hypothetical protein Pyn_10926 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 80.1 bits (196), Expect = 3.23e-17 Identity = 52/101 (51.49%), Postives = 63/101 (62.38%), Query Frame = 0
BLAST of Chy12G209530 vs. TAIR 10
Match: AT1G30260.1 (BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 61.6 bits (148), Expect = 3.7e-10 Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = 0
BLAST of Chy12G209530 vs. TAIR 10
Match: AT4G21060.1 (Galactosyltransferase family protein ) HSP 1 Score: 50.1 bits (118), Expect = 1.1e-06 Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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