Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATGGAGAACGATAGAAGGCCTGGAAGGAGCGACGCTCGTTTATCCATGGAGGAAGAAAGAGAAATGGAGGCCAAAACTCGAGAGTATTTCAATGGTGTAGCACCCAAACGCCACACTAAGCCTCAGCGCAGCGAGTTCTCTGCTCATTACGTCGATAAAGTAAATGATGAGGACAATTACATTCCTGAACTCGCCGAGTTTCAGCGCCTTGAATCTGATCCTCACGAGGTTAATTAGTTTACTTCATTATGCATGCTTTCAGCTAGTGGGGATTATCGATTCCATTCTTTAGGTCTCTGATTTTTTTCCAGCACACCAGTTGTGTGTTGAGACGTATATATATTGAAGAAATTTGTGGAGAAATTGAATTTTACTTTGAAATTTTTAGCAGAGACTTACTTATGATGGCCGTAACGGCAAGATCTCTGAGGAATTTGTGGAGACAAAGTATTATGATGATCTCAATTGTGTAGACAAACAGCACCACACGGTAATTCTCTACTTCGTCGTCCTATCGATCGATCGATCTGGCTGATCTGTGTGTGTGTGTGTTCACTAACGGAAGAAGGTGAATTTTGATCTCAGACAGGAACAGGATTCATAAAAATGGAGAATGGAGATTGCACAGGTTTTAGACTCGCACCAGATTCTGCAGATGCCGGTTGCTGCCATGGCTCTTGTAGGGGTAATCCGGCGACTAACGACTGGATTCCGGCCAGTAACGATCTGGTAAAATTTCCATGA
mRNA sequence
ATGGCAATGGAGAACGATAGAAGGCCTGGAAGGAGCGACGCTCGTTTATCCATGGAGGAAGAAAGAGAAATGGAGGCCAAAACTCGAGAGTATTTCAATGGTGTAGCACCCAAACGCCACACTAAGCCTCAGCGCAGCGAGTTCTCTGCTCATTACGTCGATAAAGTAAATGATGAGGACAATTACATTCCTGAACTCGCCGAGTTTCAGCGCCTTGAATCTGATCCTCACGAGAGACTTACTTATGATGGCCGTAACGGCAAGATCTCTGAGGAATTTGTGGAGACAAAGTATTATGATGATCTCAATTGTGTAGACAAACAGCACCACACGACAGGAACAGGATTCATAAAAATGGAGAATGGAGATTGCACAGGTTTTAGACTCGCACCAGATTCTGCAGATGCCGGTTGCTGCCATGGCTCTTGTAGGGGTAATCCGGCGACTAACGACTGGATTCCGGCCAGTAACGATCTGGTAAAATTTCCATGA
Coding sequence (CDS)
ATGGCAATGGAGAACGATAGAAGGCCTGGAAGGAGCGACGCTCGTTTATCCATGGAGGAAGAAAGAGAAATGGAGGCCAAAACTCGAGAGTATTTCAATGGTGTAGCACCCAAACGCCACACTAAGCCTCAGCGCAGCGAGTTCTCTGCTCATTACGTCGATAAAGTAAATGATGAGGACAATTACATTCCTGAACTCGCCGAGTTTCAGCGCCTTGAATCTGATCCTCACGAGAGACTTACTTATGATGGCCGTAACGGCAAGATCTCTGAGGAATTTGTGGAGACAAAGTATTATGATGATCTCAATTGTGTAGACAAACAGCACCACACGACAGGAACAGGATTCATAAAAATGGAGAATGGAGATTGCACAGGTTTTAGACTCGCACCAGATTCTGCAGATGCCGGTTGCTGCCATGGCTCTTGTAGGGGTAATCCGGCGACTAACGACTGGATTCCGGCCAGTAACGATCTGGTAAAATTTCCATGA
Protein sequence
MAMENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNDEDNYIPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENGDCTGFRLAPDSADAGCCHGSCRGNPATNDWIPASNDLVKFP*
Homology
BLAST of Chy12G208610 vs. ExPASy TrEMBL
Match:
A0A0A0M0Q2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G528510 PE=4 SV=1)
HSP 1 Score: 330.1 bits (845), Expect = 5.3e-87
Identity = 157/161 (97.52%), Postives = 157/161 (97.52%), Query Frame = 0
Query: 2 AMENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNDEDN 61
AMENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDK NDEDN
Sbjct: 50 AMENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKGNDEDN 109
Query: 62 YIPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMEN 121
YIPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMEN
Sbjct: 110 YIPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMEN 169
Query: 122 GDCTGFRLAPDSADAGCCHGSCRGNPATNDWIPASNDLVKF 163
GDC GFRLAPDSADAGCCHGSCRGNPATNDWIPASNDL F
Sbjct: 170 GDCKGFRLAPDSADAGCCHGSCRGNPATNDWIPASNDLGHF 210
BLAST of Chy12G208610 vs. ExPASy TrEMBL
Match:
A0A5D3BE87 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001400 PE=4 SV=1)
HSP 1 Score: 325.9 bits (834), Expect = 9.9e-86
Identity = 155/161 (96.27%), Postives = 156/161 (96.89%), Query Frame = 0
Query: 3 MENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNDEDNY 62
MENDRRPGRSDARLSMEEEREMEAKTREYFNGVA KRHTKPQRSEFSAHYVDKVNDEDNY
Sbjct: 1 MENDRRPGRSDARLSMEEEREMEAKTREYFNGVATKRHTKPQRSEFSAHYVDKVNDEDNY 60
Query: 63 IPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 122
IPELA+FQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG
Sbjct: 61 IPELAKFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 120
Query: 123 DCTGFRLAPDSADAGCCHGSCRGNPATNDWIPASNDLVKFP 164
DC GFRLAPDSA A CCHGSCRGNPATNDWIPASND VKFP
Sbjct: 121 DCKGFRLAPDSAAADCCHGSCRGNPATNDWIPASNDPVKFP 161
BLAST of Chy12G208610 vs. ExPASy TrEMBL
Match:
A0A5A7SMD8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00400 PE=4 SV=1)
HSP 1 Score: 318.9 bits (816), Expect = 1.2e-83
Identity = 152/156 (97.44%), Postives = 152/156 (97.44%), Query Frame = 0
Query: 3 MENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNDEDNY 62
MENDRRPGRSDARLSMEEEREMEAKTREYFNGVA KRHTKPQRSEFSAHYVDKVNDEDNY
Sbjct: 1 MENDRRPGRSDARLSMEEEREMEAKTREYFNGVATKRHTKPQRSEFSAHYVDKVNDEDNY 60
Query: 63 IPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 122
IPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG
Sbjct: 61 IPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 120
Query: 123 DCTGFRLAPDSADAGCCHGSCRGNPATNDWIPASND 159
DC GFRLAPDSA A CCHGSCRGNPATNDWIPASND
Sbjct: 121 DCKGFRLAPDSAAADCCHGSCRGNPATNDWIPASND 156
BLAST of Chy12G208610 vs. ExPASy TrEMBL
Match:
A0A1S3C6Q6 (uncharacterized protein LOC103497099 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103497099 PE=4 SV=1)
HSP 1 Score: 317.4 bits (812), Expect = 3.5e-83
Identity = 151/156 (96.79%), Postives = 152/156 (97.44%), Query Frame = 0
Query: 3 MENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNDEDNY 62
MENDRRPGRSDARLSMEEEREMEAKTREYFNGVA KRHTKPQRSEFSAHYVDKVNDEDNY
Sbjct: 1 MENDRRPGRSDARLSMEEEREMEAKTREYFNGVATKRHTKPQRSEFSAHYVDKVNDEDNY 60
Query: 63 IPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 122
IPELA+FQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG
Sbjct: 61 IPELAKFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 120
Query: 123 DCTGFRLAPDSADAGCCHGSCRGNPATNDWIPASND 159
DC GFRLAPDSA A CCHGSCRGNPATNDWIPASND
Sbjct: 121 DCKGFRLAPDSAAADCCHGSCRGNPATNDWIPASND 156
BLAST of Chy12G208610 vs. ExPASy TrEMBL
Match:
A0A1S3C5E6 (uncharacterized protein LOC103497099 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497099 PE=4 SV=1)
HSP 1 Score: 317.4 bits (812), Expect = 3.5e-83
Identity = 151/156 (96.79%), Postives = 152/156 (97.44%), Query Frame = 0
Query: 3 MENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNDEDNY 62
MENDRRPGRSDARLSMEEEREMEAKTREYFNGVA KRHTKPQRSEFSAHYVDKVNDEDNY
Sbjct: 1 MENDRRPGRSDARLSMEEEREMEAKTREYFNGVATKRHTKPQRSEFSAHYVDKVNDEDNY 60
Query: 63 IPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 122
IPELA+FQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG
Sbjct: 61 IPELAKFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 120
Query: 123 DCTGFRLAPDSADAGCCHGSCRGNPATNDWIPASND 159
DC GFRLAPDSA A CCHGSCRGNPATNDWIPASND
Sbjct: 121 DCKGFRLAPDSAAADCCHGSCRGNPATNDWIPASND 156
BLAST of Chy12G208610 vs. NCBI nr
Match:
XP_011658480.2 (uncharacterized protein LOC101210530 isoform X4 [Cucumis sativus] >KGN65786.1 hypothetical protein Csa_023205 [Cucumis sativus])
HSP 1 Score: 328 bits (840), Expect = 2.95e-112
Identity = 157/161 (97.52%), Postives = 157/161 (97.52%), Query Frame = 0
Query: 2 AMENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNDEDN 61
AMENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDK NDEDN
Sbjct: 50 AMENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKGNDEDN 109
Query: 62 YIPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMEN 121
YIPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMEN
Sbjct: 110 YIPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMEN 169
Query: 122 GDCTGFRLAPDSADAGCCHGSCRGNPATNDWIPASNDLVKF 162
GDC GFRLAPDSADAGCCHGSCRGNPATNDWIPASNDL F
Sbjct: 170 GDCKGFRLAPDSADAGCCHGSCRGNPATNDWIPASNDLGHF 210
BLAST of Chy12G208610 vs. NCBI nr
Match:
XP_004154227.2 (uncharacterized protein LOC101210530 isoform X2 [Cucumis sativus])
HSP 1 Score: 327 bits (838), Expect = 7.59e-112
Identity = 156/160 (97.50%), Postives = 157/160 (98.12%), Query Frame = 0
Query: 2 AMENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNDEDN 61
AMENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDK NDEDN
Sbjct: 50 AMENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKGNDEDN 109
Query: 62 YIPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMEN 121
YIPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMEN
Sbjct: 110 YIPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMEN 169
Query: 122 GDCTGFRLAPDSADAGCCHGSCRGNPATNDWIPASNDLVK 161
GDC GFRLAPDSADAGCCHGSCRGNPATNDWIPASNDL +
Sbjct: 170 GDCKGFRLAPDSADAGCCHGSCRGNPATNDWIPASNDLAE 209
BLAST of Chy12G208610 vs. NCBI nr
Match:
TYJ97334.1 (uncharacterized protein E5676_scaffold194G001400 [Cucumis melo var. makuwa])
HSP 1 Score: 323 bits (829), Expect = 1.67e-111
Identity = 155/161 (96.27%), Postives = 156/161 (96.89%), Query Frame = 0
Query: 3 MENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNDEDNY 62
MENDRRPGRSDARLSMEEEREMEAKTREYFNGVA KRHTKPQRSEFSAHYVDKVNDEDNY
Sbjct: 1 MENDRRPGRSDARLSMEEEREMEAKTREYFNGVATKRHTKPQRSEFSAHYVDKVNDEDNY 60
Query: 63 IPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 122
IPELA+FQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG
Sbjct: 61 IPELAKFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMENG 120
Query: 123 DCTGFRLAPDSADAGCCHGSCRGNPATNDWIPASNDLVKFP 163
DC GFRLAPDSA A CCHGSCRGNPATNDWIPASND VKFP
Sbjct: 121 DCKGFRLAPDSAAADCCHGSCRGNPATNDWIPASNDPVKFP 161
BLAST of Chy12G208610 vs. NCBI nr
Match:
XP_004145260.1 (uncharacterized protein LOC101210530 isoform X3 [Cucumis sativus])
HSP 1 Score: 322 bits (824), Expect = 1.47e-110
Identity = 156/161 (96.89%), Postives = 156/161 (96.89%), Query Frame = 0
Query: 3 MENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNDEDNY 62
MENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDK NDEDNY
Sbjct: 1 MENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKGNDEDNY 60
Query: 63 IPELAEFQRLESDPHE-RLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMEN 122
IPELAEFQRLESDPHE RLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMEN
Sbjct: 61 IPELAEFQRLESDPHEQRLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMEN 120
Query: 123 GDCTGFRLAPDSADAGCCHGSCRGNPATNDWIPASNDLVKF 162
GDC GFRLAPDSADAGCCHGSCRGNPATNDWIPASNDL F
Sbjct: 121 GDCKGFRLAPDSADAGCCHGSCRGNPATNDWIPASNDLGHF 161
BLAST of Chy12G208610 vs. NCBI nr
Match:
XP_004145259.1 (uncharacterized protein LOC101210530 isoform X1 [Cucumis sativus])
HSP 1 Score: 321 bits (822), Expect = 3.77e-110
Identity = 155/160 (96.88%), Postives = 156/160 (97.50%), Query Frame = 0
Query: 3 MENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKVNDEDNY 62
MENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDK NDEDNY
Sbjct: 1 MENDRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYVDKGNDEDNY 60
Query: 63 IPELAEFQRLESDPHE-RLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMEN 122
IPELAEFQRLESDPHE RLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMEN
Sbjct: 61 IPELAEFQRLESDPHEQRLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFIKMEN 120
Query: 123 GDCTGFRLAPDSADAGCCHGSCRGNPATNDWIPASNDLVK 161
GDC GFRLAPDSADAGCCHGSCRGNPATNDWIPASNDL +
Sbjct: 121 GDCKGFRLAPDSADAGCCHGSCRGNPATNDWIPASNDLAE 160
BLAST of Chy12G208610 vs. TAIR 10
Match:
AT4G37300.1 (maternal effect embryo arrest 59 )
HSP 1 Score: 102.8 bits (255), Expect = 2.6e-22
Identity = 65/160 (40.62%), Postives = 92/160 (57.50%), Query Frame = 0
Query: 8 RPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSE------FSAHYVDKVNDEDN 67
+P RSD E++ + + R F+ +APKR TKP RSE FSA DK+ D
Sbjct: 5 KPSRSDEISDPEQQIKNANQIRADFDSLAPKRPTKPTRSEPGFPGSFSAS--DKITDH-- 64
Query: 68 YIPELAEFQRLESDPHERLTYDGRNGKISEEFVETKYYDDLNCVDKQHHTTGTGFI---K 127
PE +FQ L+S H ++ +G + + +EF+ET+YY +L +DKQHHTTG+GFI K
Sbjct: 65 --PEADKFQSLQSQTHGKVLGEGDSSAVQDEFLETEYYSNLTAIDKQHHTTGSGFINVVK 124
Query: 128 MENGDCTGFRLAPDSADAGCCHGSCRGNPATNDWIPASND 159
+NG+ + A D G R NPATN+WIPA+ +
Sbjct: 125 EDNGEESEAVTAAAIGDGG-EKAVYRSNPATNEWIPATEE 157
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0M0Q2 | 5.3e-87 | 97.52 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G528510 PE=4 SV=1 | [more] |
A0A5D3BE87 | 9.9e-86 | 96.27 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7SMD8 | 1.2e-83 | 97.44 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A1S3C6Q6 | 3.5e-83 | 96.79 | uncharacterized protein LOC103497099 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A1S3C5E6 | 3.5e-83 | 96.79 | uncharacterized protein LOC103497099 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
Match Name | E-value | Identity | Description | |
XP_011658480.2 | 2.95e-112 | 97.52 | uncharacterized protein LOC101210530 isoform X4 [Cucumis sativus] >KGN65786.1 hy... | [more] |
XP_004154227.2 | 7.59e-112 | 97.50 | uncharacterized protein LOC101210530 isoform X2 [Cucumis sativus] | [more] |
TYJ97334.1 | 1.67e-111 | 96.27 | uncharacterized protein E5676_scaffold194G001400 [Cucumis melo var. makuwa] | [more] |
XP_004145260.1 | 1.47e-110 | 96.89 | uncharacterized protein LOC101210530 isoform X3 [Cucumis sativus] | [more] |
XP_004145259.1 | 3.77e-110 | 96.88 | uncharacterized protein LOC101210530 isoform X1 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
AT4G37300.1 | 2.6e-22 | 40.63 | maternal effect embryo arrest 59 | [more] |