Chy12G208130 (gene) Cucumber (hystrix) v1

Overview
NameChy12G208130
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH12: 2513507 .. 2515141 (+)
RNA-Seq ExpressionChy12G208130
SyntenyChy12G208130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGGTTCATCTGGTAGACAAGAACCGGTCTTTAGGTGGTTTTAGTCACCGGTTATAGCCGGTAAACTAAGAGGCAAACTTACCGATAGGTCCGGTGAAGAGGGTCAATGGTATAAGATAGCTGGGGTTTAAGCATTATGTGTTTTGGTGGTTTTTCAAAGGGTTTTGGCGATCGGAATTTTTTATTTTTAGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAATTTAATTTTCAAACTTTGTTTTTGGTTTGGTGTTGGGAATTTTTATTTTTTTCTTTTGGATTAAAGCGAAAAATTTTAAAAGAAAAATAGGAGATGGGATAGAAAACGAGAGAATGTGGTGAATCAATCAAAGCCAATCCTTGTTTTGTTCTCCGATTTCTTTTCTAATTTTTTACAGATCTCTTTTTCGCTTGCATTTGGTGGTGTTTTTCGCCGGAATTTCGTTTTCCGGTGATGAGGATTTGAAAATCGTTTTATTTCAGGTGAGTCATCATAATCGTTTTCTTTTTTTGTTTTCACCCATTTTTGTGTTGATAATTTTTTCTTTCGTCGTATCTAATGGATGTGTTGGTGGGGTTTTTTTCTTCTTCAGAACAGTGCATTTGGATTTTAGACAAAAACCTTGGGATTAGGGTCCTGAATTTGGAAGATTTAACCTCCAATTTCGTTTCAGTATTGTCGTTTGTTGAGAATTTTTGGTTTTTATTCTTTTTAATATCTGAAGATGATCACACTCGAATGGGTTTTTTTATTGGGTTTCTGGGTATTCAATTTGTGCTCTGTGAGATTCGATCTCTGATTCTGCATCAATTTTCTTCTTTTTTTTTTTTCTTTTTTTTTATAATTTTGTGGGTGATCGAAAATTTTCGATTTTTCTGTTACCAGTTCTTGAATTTCGATAAAATTTCAGCTGTTTGGTGAATCCTGCTTGGATGTGAGGAACCATCTCTTTCTCATGGATTTATGTTTTCTCTTCGTCTTCGATCATCTACTCAAGGGTTTTGTTGTGGTTTGTCATCAATTTATTAATTTATAGTTTTTTTTTCCGGTTAACGAGTAACAACATATCTTTCTTAATATTTTCTCTCTAAAATTCTTTCTGGGTTGGATTTTGAAATTTATTATTACTGCATGTCACTTTATTTCTGATGCTTGTGTAACTCTGTATTGCATGAGGTTTTACTTTTACCTTTCTGGAACTCTTCGATTGCTTCATCCCGTCATCACTAAAGATTGTTGAAATTTGGGTTTTACTTAGATCATCAGCCTCTCTTGAAATTTTAATTATGGGTCATTGCTCCTTGTATTTCTTTGTGTGGGTGTGCGTGAATGGGTTTGGTTGGATTGAATAGAAGCATTGGACTTGTGATGTGAAGGCCTGCAATTGCCCCAGAACTTTTGTTTTGATTCGTCGTCCTCGAATGTCAAATCATAATTCCTCTTTTCAATTTCATTTCTCTAGTGTGTGAGAAGAGATCCAGTTTGAGTTCAGGATAGGGCATTCGATCCTTGCTAGTTTGTGTGATTTGATGTTCTAAACCAATAAACTAAATAAAATCTGATTCATTTCTTTTTCTTTCCAGGAATTAATCTGTACTTTGACATTGTGA

mRNA sequence

ATGGTGGGTTCATCTGGTAGACAAGAACCGGTCTTTAGATCTCTTTTTCGCTTGCATTTGGTGGTGTTTTTCGCCGGAATTTCGTTTTCCGGTGATGAGGATTTGAAAATCGTTTTATTTCAGGAATTAATCTGTACTTTGACATTGTGA

Coding sequence (CDS)

ATGGTGGGTTCATCTGGTAGACAAGAACCGGTCTTTAGATCTCTTTTTCGCTTGCATTTGGTGGTGTTTTTCGCCGGAATTTCGTTTTCCGGTGATGAGGATTTGAAAATCGTTTTATTTCAGGAATTAATCTGTACTTTGACATTGTGA

Protein sequence

MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLKIVLFQELICTLTL*
Homology
[Close]
BLAST of Chy12G208130 vs. ExPASy TrEMBL
Match: A0A0A0LUX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523100 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.9e-17
Identity = 47/49 (95.92%), Postives = 47/49 (95.92%), Query Frame = 0 

Query: 1  MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLKIVLFQELICTLTL 50
          MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLK VLFQELIC LTL
Sbjct: 1  MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLKFVLFQELICILTL 49

[Close]
BLAST of Chy12G208130 vs. NCBI nr
Match: KGN65735.1 (hypothetical protein Csa_019789 [Cucumis sativus])

HSP 1 Score: 95.1 bits (235), Expect = 1.94e-24
Identity = 47/49 (95.92%), Postives = 47/49 (95.92%), Query Frame = 0 

Query: 1  MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLKIVLFQELICTLTL 49
          MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLK VLFQELIC LTL
Sbjct: 1  MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLKFVLFQELICILTL 49

The following BLAST results are available for this feature:
BLAST of Chy12G208130 vs.
Match NameE-valueIdentityDescription
BLAST of Chy12G208130 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUX23.9e-1795.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523100 PE=4 SV=1[more]
BLAST of Chy12G208130 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65735.11.94e-2495.92hypothetical protein Csa_019789 [Cucumis sativus][more]
BLAST of Chy12G208130 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy12G208130.1Chy12G208130.1mRNA