Chy12G207950 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G207950
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RING-type E3 ubiquitin transferase
Location	chrH12: 2370055 .. 2372300 (-)
RNA-Seq Expression	Chy12G207950
Synteny	Chy12G207950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGTTGCCACCGTCGCCTCTGCCGCCGTTGCACTCACTGATCCTACTTCCTGGCTTCATTATGGATTTGCTGATGCTCTCCATGCTTCTTCTCATTGTACTACTTTTATTCATTTCCATTTTATGTAGAAAACGATCCGCCAAATCTGACGGGGAAGAGTTGCCGGAGAATCTGGACATTGAAGCACCGGTTTTTCATTACGGAGGAGTTGAAGGCGGCGAACAAGAATGTGCGATTTGCCTTTGTGAAATTGAGGAAGGAGAGAAGTGTAGAAAGATGAAGACGTGTGGTCATGTGTTTCATAAAGACTGCATTGACCGGTGGTTTAAGGTGGATGGCCATTGTCCAATTTGTCGGACCTCCGTTTGTGTTGTAGTCGTTGATCGCGGTGAAAATGCCATGGCTTCTTCTTCATCTTTACCGGCCCCCTTCATGAACTGAATTTAATCTCGACACTGATCAACTTTGTGATCACAATGAAGCAAGCGAAGTAGTAAATACTATATATAGAGTCCTTTTATGTTCTTTTTCCTAATGTTTTGTTTAATGAATTTGTATCTGTATTGAGCTCAATTGAATGGAATGATGGATTAAAACACTAGGGGAAATCAACGAACCTACTTATGTTATACACATTTACAACACATAAGCTAATATACTGTATTAGAGTCTATCTAAAAGGGTGTACTATTAACGACATACTTCTACAGTTAGTCTATCAATAAATGAGTCTACTAAAAACACTCGACAAGATGAGCTTATAACTCAACTGTATAATATTTGTACAATCAATAACTCAACTGTATAATAGTTGTACAATCAATATCAATTCCCAAAGGCAATTCACTTATCTCACCCTACATATTTAATTCAATACTCATTTTAAAATTTTTATTAACGATATATACTATTAAATTACAAAAGATACTCTTGAAATTTGTAGTTTGTGTAAAAAATACACATAAACTTTCAAAAGTTTAAAATACGTCTTTAAAATTTTAAAAGAGGTTAAAAAATACACTTACGGTTAGATTTGAATGAAAACGATTTAAATTTTGTTTAAAAATGAGTTTGGACGAAAAAGTTTCATAAATATTATTGAGCTTAGAAAAGCTTGTTAAAAAAAACTTAAGAATAGTTAAAATAATATGCTTATTGAAGCAAATTTTACCTTACTTTCTCACCAACAAAAATAAAAACCTAAATATATAAATTTCACATTTTCTATCAATATTTTTTTAAAAATCACTAAATAAATTTCAATGATCAACTTCACCCTTATACAATGATTTAAAATGTCACTTCCAAATTTTTCACCATCAATACCGTCGTTTGTACCTCCTCAATATGTTGGTTATGTGCCAACGGTCTTCATGTTTCTCTTCATTTTACTATGTTTCTACCTTATCACTTTATGTAGTGAAAGAGTTGCCAAATCTAATCGCAAAAAGTTAGCTCGAGACTTTAGAGATTTGAAGTACCGAATTTTAGTTGCGATGGGTAAGACAACGACGATAAGAAAAATAGTACGATCTATCTTTGCAAAATTGAAGAAGAGGAGAAATGTAGAAGGATGAGCATGTGTGATCACGTGTGTTTCATAGGGATTGCATTAACCAATGGCTTTTGATTGGTGGTTTATATTAAACCGTCGTTGTCTAGTTTGTCCGGCTGTCATTTGTGTGGTGGTTGATTAGATTAGTAGTGATGAAAATATAATGAGAATTAGTAGAATTTTATAGAAAGTGGAGCCTTATTTGATTGTTTTTAAATTTATTGTGAAGCTATGAATAAAAGTTACATTAATTATAGTATTATTTTCATCTTTTTTTTTATACAAGTGTTAACAGTAAGTTTGACTATTATTGATATAACCTACATTTTAAAAAGGGTGAGATTGAATCCCACAACTCAACCATCTAGTTGTAAAGAAACAAACACAAATGAGAACCATAGTAACTATAGGTATGAATGAATTAAAGAGTACTTTGTTAAGTTTGTTTGTACTCAACGAAATAGAATTAGAAGAAGAAAAACTTTTCTTTAGAAAGCATGTACTGTCACGTGTGTGGCTGAAAGTGATTTAGGGTAAAAAAATATGTGCATTATTTATGAGCAAAAAGAAGAAAATATATCCGAAAATAACTATATTGAATTGACGTTAAACTGCTTCAATTCCTAACTCAGACTTAAGAAACTATGGAAACTGCAAACCAACCGGCTGGCCGTCGGTTAGTTCGTAA

mRNA sequence

ATGCCGTTGCCACCGTCGCCTCTGCCGCCGTTGCACTCACTGATCCTACTTCCTGGCTTCATTATGGATTTGCTGATGCTCTCCATGCTTCTTCTCATTGTACTACTTTTATTCATTTCCATTTTATGTAGAAAACGATCCGCCAAATCTGACGGGGAAGAGTTGCCGGAGAATCTGGACATTGAAGCACCGGTTTTTCATTACGGAGGAGTTGAAGGCGGCGAACAAGAATGTGCGATTTGCCTTTGTGAAATTGAGGAAGGAGAGAAGTGTAGAAAGATGAAGACGTGTGGTCATGTGTTTCATAAAGACTGCATTGACCGTGAAAGAGTTGCCAAATCTAATCGCAAAAAGTTAGCTCGAGACTTTAGAGATTTGAAGTACCGAATTTTAGTTGCGATGGACTTAAGAAACTATGGAAACTGCAAACCAACCGGCTGGCCGTCGGTTAGTTCGTAA

Coding sequence (CDS)

ATGCCGTTGCCACCGTCGCCTCTGCCGCCGTTGCACTCACTGATCCTACTTCCTGGCTTCATTATGGATTTGCTGATGCTCTCCATGCTTCTTCTCATTGTACTACTTTTATTCATTTCCATTTTATGTAGAAAACGATCCGCCAAATCTGACGGGGAAGAGTTGCCGGAGAATCTGGACATTGAAGCACCGGTTTTTCATTACGGAGGAGTTGAAGGCGGCGAACAAGAATGTGCGATTTGCCTTTGTGAAATTGAGGAAGGAGAGAAGTGTAGAAAGATGAAGACGTGTGGTCATGTGTTTCATAAAGACTGCATTGACCGTGAAAGAGTTGCCAAATCTAATCGCAAAAAGTTAGCTCGAGACTTTAGAGATTTGAAGTACCGAATTTTAGTTGCGATGGACTTAAGAAACTATGGAAACTGCAAACCAACCGGCTGGCCGTCGGTTAGTTCGTAA

Protein sequence

MPLPPSPLPPLHSLILLPGFIMDLLMLSMLLLIVLLLFISILCRKRSAKSDGEELPENLDIEAPVFHYGGVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRERVAKSNRKKLARDFRDLKYRILVAMDLRNYGNCKPTGWPSVSS*

Homology

[Close]

BLAST of Chy12G207950 vs. ExPASy Swiss-Prot
Match: O64763 (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.8e-07
Identity = 39/107 (36.45%), Postives = 49/107 (45.79%), Query Frame = 0


Query: 29  MLLLIVLLLFISILCRK-----------RSAKSDGEE--------LPENLDIEA----PV 88
           + L+I  ++F SI CR+           RS  +D E             LD EA    P 
Sbjct: 58  LFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEAIETFPT 117

Query: 89  FHYGGVEG-----GEQECAICLCEIEEGEKCRKMKTCGHVFHKDCID 108
           F Y  V+      G  ECA+CLCE E+ E  R M  C HVFH DC+D
Sbjct: 118 FLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVD 164

[Close]

BLAST of Chy12G207950 vs. ExPASy Swiss-Prot
Match: Q940Q4 (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.1e-06
Identity = 23/47 (48.94%), Postives = 29/47 (61.70%), Query Frame = 0


Query: 64  PVFHYGGVEGGEQ---ECAICLCEIEEGEKCRKMKTCGHVFHKDCID 108
           PVFHY  + G +    +CA+CLCE E  +K R +  C H FH DCID
Sbjct: 117 PVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCID 163

[Close]

BLAST of Chy12G207950 vs. ExPASy Swiss-Prot
Match: Q8W571 (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3)

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-05
Identity = 29/71 (40.85%), Postives = 39/71 (54.93%), Query Frame = 0


Query: 46  RSAKSDGEELPENLD---IEA-PVFHYGGVE-----GGEQECAICLCEIEEGEKCRKMKT 105
           R+  +DG      LD   +E+ PVF Y  V+       + ECAICL E+E+ E  R +  
Sbjct: 83  RNRANDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPI 142

Query: 106 CGHVFHKDCID 108
           C H+FH DCID
Sbjct: 143 CNHLFHIDCID 153

[Close]

BLAST of Chy12G207950 vs. ExPASy Swiss-Prot
Match: O22755 (Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=ATL44 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-05
Identity = 21/44 (47.73%), Postives = 30/44 (68.18%), Query Frame = 0


Query: 72  EGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRERVAKSN 116
           EG   ECAICL +  +GE+ R +  CGH FH +CID+  V++S+
Sbjct: 96  EGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSS 139

[Close]

BLAST of Chy12G207950 vs. ExPASy Swiss-Prot
Match: Q9M0R4 (Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana OX=3702 GN=ATL37 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 4.5e-05
Identity = 32/101 (31.68%), Postives = 52/101 (51.49%), Query Frame = 0


Query: 21  IMDLLMLSMLLLIVLLLFISILCRKRSAKSDGEE---------LPENLDIEAPVFHYGGV 80
           I+ +++LS+ LL++++  ++  C     ++ G E         + +++    P F Y  V
Sbjct: 49  IIGIVLLSLFLLLLVVYCLNYGCCIEENETGGHEVLHSRVRRGIDKDVIESFPAFLYSEV 108

Query: 81  E-----GGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCID 108
           +      G  ECAICLCE E+ E  R M  C H FH +CID
Sbjct: 109 KAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCID 149

[Close]

BLAST of Chy12G207950 vs. ExPASy TrEMBL
Match: A0A0A0K790 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G387140 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 6.1e-45
Identity = 96/108 (88.89%), Postives = 99/108 (91.67%), Query Frame = 0


Query: 1   MPLPPSPLPPLHSLILLPGFIMDLLMLSMLLLIVLLLFISILCRKRSAKSDGEELPENLD 60
           MPL PSP+P LHSLILLPGFIMDLL + MLLLIVL  FI ILCRKRSAKSDGEELPENLD
Sbjct: 11  MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD 70

Query: 61  IEAPVFHYGGVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDR 109
           IEAP+FHY GVEG EQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDR
Sbjct: 71  IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDR 118

[Close]

BLAST of Chy12G207950 vs. ExPASy TrEMBL
Match: A0A0A0LY10 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G514470 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.4e-41
Identity = 92/108 (85.19%), Postives = 96/108 (88.89%), Query Frame = 0


Query: 1   MPLPPSPLPPLHSLILLPGFIMDLLMLSMLLLIVLLLFISILCRKRSAKSDGEELPENLD 60
           M L PSPLP LHSLILLP +I DLLM SM L IVLLLFISILCRKRSAKSD EE PEN+D
Sbjct: 1   MSLSPSPLPSLHSLILLPRYIEDLLMASMFLSIVLLLFISILCRKRSAKSDVEEFPENVD 60

Query: 61  IEAPVFHYGGVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDR 109
           IEAP+FHYGG EGGEQ+CAICLCEIEEGEKCRKMKTCGHVFHKDCI R
Sbjct: 61  IEAPIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIGR 108

[Close]

BLAST of Chy12G207950 vs. ExPASy TrEMBL
Match: A0A5D3BG26 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002250 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.3e-36
Identity = 83/108 (76.85%), Postives = 93/108 (86.11%), Query Frame = 0


Query: 1   MPLPPSPLPPLHSLILLPGFIMDLLMLSMLLLIVLLLFISILCRKRSAKSDGEELPENLD 60
           +PLPPSPLPPLHS I+LP  I DLLMLSM LL+VL+L I+ILC KRSAKSD +EL +NL+
Sbjct: 11  LPLPPSPLPPLHSPIVLPRSIEDLLMLSMFLLLVLILVIAILCGKRSAKSDEKELSKNLN 70

Query: 61  IEAPVFHYGGVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDR 109
           I+AP+FHYG     EQECAICLCEIEEGEKCRKMKTCGH FHKDCIDR
Sbjct: 71  IQAPIFHYGIDGDDEQECAICLCEIEEGEKCRKMKTCGHAFHKDCIDR 118

[Close]

BLAST of Chy12G207950 vs. ExPASy TrEMBL
Match: A0A1S3C741 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103497233 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.3e-36
Identity = 83/108 (76.85%), Postives = 93/108 (86.11%), Query Frame = 0


Query: 1   MPLPPSPLPPLHSLILLPGFIMDLLMLSMLLLIVLLLFISILCRKRSAKSDGEELPENLD 60
           +PLPPSPLPPLHS I+LP  I DLLMLSM LL+VL+L I+ILC KRSAKSD +EL +NL+
Sbjct: 11  LPLPPSPLPPLHSPIVLPRSIEDLLMLSMFLLLVLILVIAILCGKRSAKSDEKELSKNLN 70

Query: 61  IEAPVFHYGGVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDR 109
           I+AP+FHYG     EQECAICLCEIEEGEKCRKMKTCGH FHKDCIDR
Sbjct: 71  IQAPIFHYGIDGDDEQECAICLCEIEEGEKCRKMKTCGHAFHKDCIDR 118

[Close]

BLAST of Chy12G207950 vs. ExPASy TrEMBL
Match: A0A5A7VRG5 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00590 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 6.7e-36
Identity = 84/108 (77.78%), Postives = 91/108 (84.26%), Query Frame = 0


Query: 1   MPLPPSPLPPLHSLILLPGFIMDLLMLSMLLLIVLLLFISILCRKRSAKSDGEELPENLD 60
           +PLPPSPLPPLHS I+LP  I DLLMLSM+LL VLLL I+ILC +R AKSD EEL +NLD
Sbjct: 11  LPLPPSPLPPLHSSIVLPRSIEDLLMLSMVLLFVLLLVIAILCGRRFAKSDEEELSKNLD 70

Query: 61  IEAPVFHYGGVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDR 109
           I+A VFHYG     EQECAICLCEIEEGEKCRKMKTCGH FHKDCIDR
Sbjct: 71  IQASVFHYGVDGDDEQECAICLCEIEEGEKCRKMKTCGHAFHKDCIDR 118

[Close]

BLAST of Chy12G207950 vs. NCBI nr
Match: KAE8646305.1 (hypothetical protein Csa_016112, partial [Cucumis sativus])

HSP 1 Score: 190 bits (482), Expect = 1.44e-59
Identity = 96/108 (88.89%), Postives = 99/108 (91.67%), Query Frame = 0


Query: 1   MPLPPSPLPPLHSLILLPGFIMDLLMLSMLLLIVLLLFISILCRKRSAKSDGEELPENLD 60
           MPL PSP+P LHSLILLPGFIMDLL + MLLLIVL  FI ILCRKRSAKSDGEELPENLD
Sbjct: 1   MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD 60

Query: 61  IEAPVFHYGGVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDR 108
           IEAP+FHY GVEG EQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDR
Sbjct: 61  IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDR 108

[Close]

BLAST of Chy12G207950 vs. NCBI nr
Match: XP_011659772.1 (RING-H2 finger protein ATL39 [Cucumis sativus])

HSP 1 Score: 190 bits (482), Expect = 5.38e-59
Identity = 96/108 (88.89%), Postives = 99/108 (91.67%), Query Frame = 0


Query: 1   MPLPPSPLPPLHSLILLPGFIMDLLMLSMLLLIVLLLFISILCRKRSAKSDGEELPENLD 60
           MPL PSP+P LHSLILLPGFIMDLL + MLLLIVL  FI ILCRKRSAKSDGEELPENLD
Sbjct: 1   MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD 60

Query: 61  IEAPVFHYGGVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDR 108
           IEAP+FHY GVEG EQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDR
Sbjct: 61  IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDR 108

[Close]

BLAST of Chy12G207950 vs. NCBI nr
Match: XP_011659858.1 (E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus])

HSP 1 Score: 183 bits (464), Expect = 2.95e-56
Identity = 94/108 (87.04%), Postives = 97/108 (89.81%), Query Frame = 0


Query: 1   MPLPPSPLPPLHSLILLPGFIMDLLMLSMLLLIVLLLFISILCRKRSAKSDGEELPENLD 60
           MPL PSPLPPLHS ILLPGF M LL +SMLLLIVL LFI+ILC KRSAKSD EEL ENLD
Sbjct: 1   MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLD 60

Query: 61  IEAPVFHYGGVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDR 108
           IEAP+FHY  VEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDR
Sbjct: 61  IEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDR 108

[Close]

BLAST of Chy12G207950 vs. NCBI nr
Match: KAE8653251.1 (hypothetical protein Csa_020059 [Cucumis sativus])

HSP 1 Score: 181 bits (460), Expect = 3.78e-56
Identity = 92/108 (85.19%), Postives = 96/108 (88.89%), Query Frame = 0


Query: 1   MPLPPSPLPPLHSLILLPGFIMDLLMLSMLLLIVLLLFISILCRKRSAKSDGEELPENLD 60
           MPL PSPLPPLHS ILLPGF M L+ +SMLLLIVL LFI+ILC KRSAKSDGEE  ENLD
Sbjct: 1   MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKSDGEESSENLD 60

Query: 61  IEAPVFHYGGVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDR 108
           IEAP+FHY GVEG EQEC ICLCEIEEGEKCRKMKTCGHVFHKDCIDR
Sbjct: 61  IEAPIFHYSGVEGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDR 108

[Close]

BLAST of Chy12G207950 vs. NCBI nr
Match: XP_011648512.2 (RING-H2 finger protein ATL79 [Cucumis sativus])

HSP 1 Score: 181 bits (460), Expect = 1.20e-55
Identity = 92/108 (85.19%), Postives = 96/108 (88.89%), Query Frame = 0


Query: 1   MPLPPSPLPPLHSLILLPGFIMDLLMLSMLLLIVLLLFISILCRKRSAKSDGEELPENLD 60
           MPL PSPLPPLHS ILLPGF M L+ +SMLLLIVL LFI+ILC KRSAKSDGEE  ENLD
Sbjct: 1   MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKSDGEESSENLD 60

Query: 61  IEAPVFHYGGVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDR 108
           IEAP+FHY GVEG EQEC ICLCEIEEGEKCRKMKTCGHVFHKDCIDR
Sbjct: 61  IEAPIFHYSGVEGDEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDR 108

[Close]

BLAST of Chy12G207950 vs. TAIR 10
Match: AT2G35000.1 (RING/U-box superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 3.4e-08
Identity = 39/107 (36.45%), Postives = 49/107 (45.79%), Query Frame = 0


Query: 29  MLLLIVLLLFISILCRK-----------RSAKSDGEE--------LPENLDIEA----PV 88
           + L+I  ++F SI CR+           RS  +D E             LD EA    P 
Sbjct: 58  LFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEAIETFPT 117

Query: 89  FHYGGVEG-----GEQECAICLCEIEEGEKCRKMKTCGHVFHKDCID 108
           F Y  V+      G  ECA+CLCE E+ E  R M  C HVFH DC+D
Sbjct: 118 FLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVD 164

[Close]

BLAST of Chy12G207950 vs. TAIR 10
Match: AT4G30400.1 (RING/U-box superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 7.7e-08
Identity = 23/47 (48.94%), Postives = 29/47 (61.70%), Query Frame = 0


Query: 64  PVFHYGGVEGGEQ---ECAICLCEIEEGEKCRKMKTCGHVFHKDCID 108
           PVFHY  + G +    +CA+CLCE E  +K R +  C H FH DCID
Sbjct: 117 PVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCID 163

[Close]

BLAST of Chy12G207950 vs. TAIR 10
Match: AT2G17450.1 (RING-H2 finger A3A )

HSP 1 Score: 51.2 bits (121), Expect = 8.5e-07
Identity = 21/44 (47.73%), Postives = 30/44 (68.18%), Query Frame = 0


Query: 72  EGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRERVAKSN 116
           EG   ECAICL +  +GE+ R +  CGH FH +CID+  V++S+
Sbjct: 96  EGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSS 139

[Close]

BLAST of Chy12G207950 vs. TAIR 10
Match: AT4G40070.1 (RING/U-box superfamily protein )

HSP 1 Score: 51.2 bits (121), Expect = 8.5e-07
Identity = 29/71 (40.85%), Postives = 39/71 (54.93%), Query Frame = 0


Query: 46  RSAKSDGEELPENLD---IEA-PVFHYGGVE-----GGEQECAICLCEIEEGEKCRKMKT 105
           R+  +DG      LD   +E+ PVF Y  V+       + ECAICL E+E+ E  R +  
Sbjct: 83  RNRANDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPI 142

Query: 106 CGHVFHKDCID 108
           C H+FH DCID
Sbjct: 143 CNHLFHIDCID 153

[Close]

BLAST of Chy12G207950 vs. TAIR 10
Match: AT4G09130.1 (RING/U-box superfamily protein )

HSP 1 Score: 49.3 bits (116), Expect = 3.2e-06
Identity = 32/101 (31.68%), Postives = 52/101 (51.49%), Query Frame = 0


Query: 21  IMDLLMLSMLLLIVLLLFISILCRKRSAKSDGEE---------LPENLDIEAPVFHYGGV 80
           I+ +++LS+ LL++++  ++  C     ++ G E         + +++    P F Y  V
Sbjct: 49  IIGIVLLSLFLLLLVVYCLNYGCCIEENETGGHEVLHSRVRRGIDKDVIESFPAFLYSEV 108

Query: 81  E-----GGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCID 108
           +      G  ECAICLCE E+ E  R M  C H FH +CID
Sbjct: 109 KAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCID 149

The following BLAST results are available for this feature:

BLAST of Chy12G207950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64763	4.8e-07	36.45	E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV...	[more]
Q940Q4	1.1e-06	48.94	RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2	[more]
Q8W571	1.2e-05	40.85	RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3	[more]
O22755	1.2e-05	47.73	Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
Q9M0R4	4.5e-05	31.68	Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana OX=3702 GN=ATL37 P...	[more]

BLAST of Chy12G207950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K790	6.1e-45	88.89	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G387140 P...	[more]
A0A0A0LY10	1.4e-41	85.19	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G514470 PE...	[more]
A0A5D3BG26	2.3e-36	76.85	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C741	2.3e-36	76.85	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103497233 PE=3 ...	[more]
A0A5A7VRG5	6.7e-36	77.78	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]

BLAST of Chy12G207950 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646305.1	1.44e-59	88.89	hypothetical protein Csa_016112, partial [Cucumis sativus]	[more]
XP_011659772.1	5.38e-59	88.89	RING-H2 finger protein ATL39 [Cucumis sativus]	[more]
XP_011659858.1	2.95e-56	87.04	E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus]	[more]
KAE8653251.1	3.78e-56	85.19	hypothetical protein Csa_020059 [Cucumis sativus]	[more]
XP_011648512.2	1.20e-55	85.19	RING-H2 finger protein ATL79 [Cucumis sativus]	[more]

BLAST of Chy12G207950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35000.1	3.4e-08	36.45	RING/U-box superfamily protein	[more]
AT4G30400.1	7.7e-08	48.94	RING/U-box superfamily protein	[more]
AT2G17450.1	8.5e-07	47.73	RING-H2 finger A3A	[more]
AT4G40070.1	8.5e-07	40.85	RING/U-box superfamily protein	[more]
AT4G09130.1	3.2e-06	31.68	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF17123	zf-RING_11	coord: 77..106 e-value: 3.6E-9 score: 36.2
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 62..118 e-value: 7.2E-12 score: 46.4
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 28..108
None	No IPR available	PANTHER	PTHR45676:SF98	RING-H2 FINGER PROTEIN ATL2	coord: 28..108
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 72..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G207950.1	Chy12G207950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane