Chy12G207900 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G207900
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	outer envelope pore protein 16, chloroplastic
Location	chrH12: 2349952 .. 2351642 (-)
RNA-Seq Expression	Chy12G207900
Synteny	Chy12G207900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCGCACCGGCTTCGTCGGCTCCTCATCGACCCCCAAGATCGATGTCGTCATCGATATGGGTAATCCCTTTCTCAATCTCACCGTCGATGGCTTCTTGAAGATCGGATCCGTATGTGTTTCTTGTTTTATATATTCTTGATTTTTTTTTTGTGTGTTTATTATGGCTAAATGTGAAATGGGTTCTGTTCGTTTGGTTCTACTGTTTAGGTCGCTGCTACTCGAGCGGCTGCTGAGGATGCTTATCATGTTGTTAGAAAAGGTTTTGTTTTTCTCGCCTTTTTCTGCGAAATTGGTTTCAATTTCTTGCTTTCTTTACTGATTTTATGGCGTTGCTTTTGATTCTGTAGGAACAATTTCTACTCACAATTTTGAAAATACGGTTAGTATCTCTTGCTTCAGACTCAAGTTGTGGAGTCTGCCAGTTTATGGCTTTTGAATGCTGAAATTTTCATTTTTAGAATGTTTATAATTAGGAGCGAGACTTTTAATTAGTAGATTATATAGTTACCTCTATTTTTCTATTTGTTGCGGTAGTTTCTGTTTTGAATTATCTAACACCTAAGTTTAAAGTTTAGAGTTTTACATAAATAAACCAACGTCACATCCAAATTAGATAAATATCAAAGAAATGAAAGTATAGATCTTACCTCTGCCAACAGAGTGTAACTTTCTTTTCAATGACTTACCCATGAAAACAGTAAAATTAAGTGTGTTTAGCTTAACACAATTCTTTGTTGGGTAAATTTATGAGAATTTTTCAAAGAAGCATGTAAGTGAAGACAAAACACTTTGAAATGATTTGTGTTGGTTTGTGGGGATGTTGGGGATTCCAAATCCTTGACTTGGGGCATTACAACCGGTACCTTTCAATCATTTAGATATAATACTGTTAAAGTTACAAAATGATTTGAAACTCCCATTGCACTTGGAAAAGCTACAAAATGATTATGCTGTTCTGTAAAAGAGGCCTTGAAAGCTTAAAGCTTAAGTGAACTAGTAGGTTCTTGAACTTTAATATTACCTGCTTTTTGGTCTTTTGATCTATAAGAAAAATATTGAAATTTGAAGTTGTTGTTACTCTCTCACTCTACTACCTCGTTCAGCTTATTAACTTGAACTTCTGTTGCAGTTGAAGAAAATGTGTAAAGAAGGTGCATATTGGGGTAAGTATGGATCCCATTACTCTTCAATGAAGTACTTAGCTTAGTGGATGAGTTTCAGCATCTATAAACCTCATGCCAATTTGAAAAGATCTTTCTTTTGAATCATTTTTTTTTTGGAAATTAACCTTATAGCTTTGAAAATGATTTTGAAAGTTGATTTGAAAATATAGAGAAGGCATATAATTGACCAACTGTTGTTTCGTTTGAATGCAGGAACCGTAGCTGGAGCTTATGTTGGTATGGAGTATGGAGTAGAAAGGATTCGTGGCACAAGAGATTGGGTATGTTTTCTATTAATTCAAAGCCGTCCTTTAAATCAAGTTCGAGTTATTCTGTTAGATTATTGAGAATATTTTCAATATATTTGAGCATTTGTTTCCAGAAAAATGCAATGATTGGAGGTGCTTTGACGGGAGCTCTAGTATCAGCTGCGAGCAACAACAACCGAGACAAAGTTGTTATCGACGCAATTACAGGAGGAGCTGTTGCAACTGCTGCAGAGTTCATAAACTATCTTACTTGA

mRNA sequence

ATGCCTCGCACCGGCTTCGTCGGCTCCTCATCGACCCCCAAGATCGATGTCGTCATCGATATGGGTAATCCCTTTCTCAATCTCACCGTCGATGGCTTCTTGAAGATCGGATCCGTCGCTGCTACTCGAGCGGCTGCTGAGGATGCTTATCATGTTGTTAGAAAAGGAACAATTTCTACTCACAATTTTGAAAATACGTTGAAGAAAATGTGTAAAGAAGGTGCATATTGGGGAACCGTAGCTGGAGCTTATGTTGGTATGGAGTATGGAGTAGAAAGGATTCGTGGCACAAGAGATTGGAAAAATGCAATGATTGGAGGTGCTTTGACGGGAGCTCTAGTATCAGCTGCGAGCAACAACAACCGAGACAAAGTTGTTATCGACGCAATTACAGGAGGAGCTGTTGCAACTGCTGCAGAGTTCATAAACTATCTTACTTGA

Coding sequence (CDS)

ATGCCTCGCACCGGCTTCGTCGGCTCCTCATCGACCCCCAAGATCGATGTCGTCATCGATATGGGTAATCCCTTTCTCAATCTCACCGTCGATGGCTTCTTGAAGATCGGATCCGTCGCTGCTACTCGAGCGGCTGCTGAGGATGCTTATCATGTTGTTAGAAAAGGAACAATTTCTACTCACAATTTTGAAAATACGTTGAAGAAAATGTGTAAAGAAGGTGCATATTGGGGAACCGTAGCTGGAGCTTATGTTGGTATGGAGTATGGAGTAGAAAGGATTCGTGGCACAAGAGATTGGAAAAATGCAATGATTGGAGGTGCTTTGACGGGAGCTCTAGTATCAGCTGCGAGCAACAACAACCGAGACAAAGTTGTTATCGACGCAATTACAGGAGGAGCTGTTGCAACTGCTGCAGAGTTCATAAACTATCTTACTTGA

Protein sequence

MPRTGFVGSSSTPKIDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISTHNFENTLKKMCKEGAYWGTVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNNNRDKVVIDAITGGAVATAAEFINYLT*

Homology

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BLAST of Chy12G207900 vs. ExPASy Swiss-Prot
Match: Q41050 (Outer envelope pore protein 16, chloroplastic OS=Pisum sativum OX=3888 GN=OEP16 PE=1 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 2.9e-65
Identity = 115/146 (78.77%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPR+ F GS S+PK+DVVIDMGNPFLNLTVDGFLKIG+VAATR+ AED +H++RKG+IS+
Sbjct: 1   MPRSSFSGSLSSPKLDVVIDMGNPFLNLTVDGFLKIGAVAATRSVAEDTFHIIRKGSISS 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           ++FE +LKKMCKEGAYWG +AG YVGMEYGVERIRGTRDWKNAM GGA+TGALVSAASNN
Sbjct: 61  NDFEKSLKKMCKEGAYWGAIAGVYVGMEYGVERIRGTRDWKNAMFGGAVTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
            +DK+ +DAITG A+ATAAEFINYLT
Sbjct: 121 KKDKIAVDAITGAAIATAAEFINYLT 146

[Close]

BLAST of Chy12G207900 vs. ExPASy Swiss-Prot
Match: Q9ZV24 (Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP161 PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 5.4e-48
Identity = 85/143 (59.44%), Postives = 109/143 (76.22%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MP + F G+ STPK+ V +DMGNPFLNLTVD FLKIG+V  T++ AED Y  + KG++S 
Sbjct: 1   MPSSTFSGTVSTPKLSVAVDMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAIDKGSLSK 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
              E+ LKK+CKEG YWG   G Y+G EYG+ERIRG+RDWKNAM+ GA TGA++SA    
Sbjct: 61  STLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATGAVLSAVGKK 120

Query: 121 NRDKVVIDAITGGAVATAAEFIN 144
            +D +VIDAI GGA+ATA++F+N
Sbjct: 121 GKDTIVIDAILGGALATASQFVN 143

[Close]

BLAST of Chy12G207900 vs. ExPASy Swiss-Prot
Match: Q0WMZ5 (Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP162 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.1e-15
Identity = 49/155 (31.61%), Postives = 74/155 (47.74%), Query Frame = 0


Query: 18  VIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGT---------------ISTHN 77
           + D+G+P LN   D F+K   V A +A + +AY  V  G                   H 
Sbjct: 21  LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNVGPPSEITGNKKHR 80

Query: 78  FEN-----------TLKKMCKEGAYWGTVAGAYVGMEYGVERIR-GTRDWKNAMIGGALT 137
           F N            +K   KE   WG  AG Y G+ YG+  +R G  DW+N+ + GALT
Sbjct: 81  FPNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALT 140

Query: 138 GA--LVSAASNNNRDKVVIDAITGGAVATAAEFIN 144
           GA   ++ +   + ++VV  A+TG A++TAA  ++
Sbjct: 141 GAAMAMTTSERTSHEQVVQSALTGAAISTAANLLS 175

[Close]

BLAST of Chy12G207900 vs. ExPASy Swiss-Prot
Match: Q9LZH8 (Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP164 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-05
Identity = 32/100 (32.00%), Postives = 52/100 (52.00%), Query Frame = 0


Query: 24  PFLNLTVDGFLKI---GSVAATRAAAEDAYHVVRKGTISTHNFENTLKKMCKEGAYWGTV 83
           P  +LTV+  L++   G +    A   DA  +   G +S  +F    K + + G   G V
Sbjct: 10  PCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSG-VSQASF--VAKSIGRFGFQCGLV 69

Query: 84  AGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 121
           +G +     G++R RG  DW NA++GGA+ GA V+ ++ N
Sbjct: 70  SGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRN 106

[Close]

BLAST of Chy12G207900 vs. ExPASy TrEMBL
Match: A0A5D3BDN0 (Outer envelope pore protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002350 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.6e-74
Identity = 141/146 (96.58%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGS STPK+DVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMC EGAYWG VAGAYVGMEYGVER+RGTRDWKNAMIGGALTGALVSAASNN
Sbjct: 61  HNFENTLKKMCTEGAYWGAVAGAYVGMEYGVERVRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDKVVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Chy12G207900 vs. ExPASy TrEMBL
Match: A0A1S3C572 (outer envelope pore protein 16, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497163 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.6e-74
Identity = 141/146 (96.58%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGS STPK+DVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMC EGAYWG VAGAYVGMEYGVER+RGTRDWKNAMIGGALTGALVSAASNN
Sbjct: 61  HNFENTLKKMCTEGAYWGAVAGAYVGMEYGVERVRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDKVVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Chy12G207900 vs. ExPASy TrEMBL
Match: A0A6J1HZI5 (outer envelope pore protein 16, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111469516 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.6e-73
Identity = 138/146 (94.52%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGS STPK+DVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIS+
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMCKEGAYWGTVAG YVGMEYGVERIRG RDWKNAMIGGALTGA+VSAASN+
Sbjct: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDK+VIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKIVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Chy12G207900 vs. ExPASy TrEMBL
Match: A0A6J1HJY9 (outer envelope pore protein 16, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464797 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.6e-73
Identity = 138/146 (94.52%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGS STPK+DVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIS+
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMCKEGAYWGTVAG YVGMEYGVERIRG RDWKNAMIGGALTGA+VSAASN+
Sbjct: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDK+VIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKIVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Chy12G207900 vs. ExPASy TrEMBL
Match: A0A5N6R1E6 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009013 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.9e-68
Identity = 127/146 (86.99%), Postives = 139/146 (95.21%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPR+ F GS +TPK+DV IDMGNPFLNLTVDGFLKIG+VAATRA AEDAYH V+KG+IST
Sbjct: 1   MPRSRFSGSVTTPKVDVAIDMGNPFLNLTVDGFLKIGTVAATRAVAEDAYHAVKKGSIST 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFE+TLKKMCKEGAYWGTVAG YVGMEYGVERIRGTRDWKNAMIGGA+TGALVSAASNN
Sbjct: 61  HNFEHTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGAVTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           N+DKVV+DAITGGA+ATAAEF+NYLT
Sbjct: 121 NKDKVVVDAITGGAIATAAEFLNYLT 146

[Close]

BLAST of Chy12G207900 vs. NCBI nr
Match: XP_038893818.1 (outer envelope pore protein 16, chloroplastic [Benincasa hispida])

HSP 1 Score: 288 bits (737), Expect = 5.32e-98
Identity = 140/146 (95.89%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGF+GS STPK+DVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST
Sbjct: 1   MPRTGFIGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMCKEGAYWGTVAG YVGMEYGVER+RGTRDWKNAMIGGALTGALVSAASNN
Sbjct: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERVRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 146
           NRDK+VIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKIVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Chy12G207900 vs. NCBI nr
Match: XP_008457483.1 (PREDICTED: outer envelope pore protein 16, chloroplastic [Cucumis melo] >TYJ97413.1 outer envelope pore protein 16 [Cucumis melo var. makuwa])

HSP 1 Score: 286 bits (732), Expect = 3.08e-97
Identity = 141/146 (96.58%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGS STPK+DVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMC EGAYWG VAGAYVGMEYGVER+RGTRDWKNAMIGGALTGALVSAASNN
Sbjct: 61  HNFENTLKKMCTEGAYWGAVAGAYVGMEYGVERVRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 146
           NRDKVVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Chy12G207900 vs. NCBI nr
Match: XP_022964801.1 (outer envelope pore protein 16, chloroplastic [Cucurbita moschata] >XP_022970582.1 outer envelope pore protein 16, chloroplastic [Cucurbita maxima] >XP_023519566.1 outer envelope pore protein 16, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6583432.1 Outer envelope pore protein 16, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 282 bits (722), Expect = 1.03e-95
Identity = 138/146 (94.52%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGS STPK+DVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIS+
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMCKEGAYWGTVAG YVGMEYGVERIRG RDWKNAMIGGALTGA+VSAASN+
Sbjct: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 146
           NRDK+VIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKIVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Chy12G207900 vs. NCBI nr
Match: XP_011658142.1 (outer envelope pore protein 16, chloroplastic [Cucumis sativus] >KAE8653245.1 hypothetical protein Csa_019696 [Cucumis sativus])

HSP 1 Score: 271 bits (693), Expect = 2.73e-91
Identity = 136/146 (93.15%), Postives = 138/146 (94.52%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MP TGFVGSSSTPKIDVVID G PFLNLTVDGFLKIGSVAATRAAAEDAY VV+ G IS+
Sbjct: 1   MPPTGFVGSSSTPKIDVVIDTGYPFLNLTVDGFLKIGSVAATRAAAEDAYFVVKNGAISS 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           H FENTLKKMCKEGAYWG VAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN
Sbjct: 61  HKFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 146
           NRDKVVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of Chy12G207900 vs. NCBI nr
Match: KAE8023298.1 (hypothetical protein FH972_009013 [Carpinus fangiana])

HSP 1 Score: 267 bits (682), Expect = 1.30e-89
Identity = 127/146 (86.99%), Postives = 139/146 (95.21%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPR+ F GS +TPK+DV IDMGNPFLNLTVDGFLKIG+VAATRA AEDAYH V+KG+IST
Sbjct: 1   MPRSRFSGSVTTPKVDVAIDMGNPFLNLTVDGFLKIGTVAATRAVAEDAYHAVKKGSIST 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFE+TLKKMCKEGAYWGTVAG YVGMEYGVERIRGTRDWKNAMIGGA+TGALVSAASNN
Sbjct: 61  HNFEHTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGAVTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 146
           N+DKVV+DAITGGA+ATAAEF+NYLT
Sbjct: 121 NKDKVVVDAITGGAIATAAEFLNYLT 146

[Close]

BLAST of Chy12G207900 vs. TAIR 10
Match: AT2G28900.1 (outer plastid envelope protein 16-1 )

HSP 1 Score: 191.8 bits (486), Expect = 3.9e-49
Identity = 85/143 (59.44%), Postives = 109/143 (76.22%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MP + F G+ STPK+ V +DMGNPFLNLTVD FLKIG+V  T++ AED Y  + KG++S 
Sbjct: 1   MPSSTFSGTVSTPKLSVAVDMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAIDKGSLSK 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
              E+ LKK+CKEG YWG   G Y+G EYG+ERIRG+RDWKNAM+ GA TGA++SA    
Sbjct: 61  STLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATGAVLSAVGKK 120

Query: 121 NRDKVVIDAITGGAVATAAEFIN 144
            +D +VIDAI GGA+ATA++F+N
Sbjct: 121 GKDTIVIDAILGGALATASQFVN 143

[Close]

BLAST of Chy12G207900 vs. TAIR 10
Match: AT4G16160.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-16
Identity = 50/153 (32.68%), Postives = 75/153 (49.02%), Query Frame = 0


Query: 18  VIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST-------------HNFE 77
           + D+G+P LN   D F+K   V A +A + +AY  V  G  S              H F 
Sbjct: 21  LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGFDSNNVGPPSEITGNKKHRFP 80

Query: 78  N-----------TLKKMCKEGAYWGTVAGAYVGMEYGVERIR-GTRDWKNAMIGGALTGA 137
           N            +K   KE   WG  AG Y G+ YG+  +R G  DW+N+ + GALTGA
Sbjct: 81  NLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALTGA 140

Query: 138 --LVSAASNNNRDKVVIDAITGGAVATAAEFIN 144
              ++ +   + ++VV  A+TG A++TAA  ++
Sbjct: 141 AMAMTTSERTSHEQVVQSALTGAAISTAANLLS 173

[Close]

BLAST of Chy12G207900 vs. TAIR 10
Match: AT4G16160.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 82.0 bits (201), Expect = 4.3e-16
Identity = 49/155 (31.61%), Postives = 74/155 (47.74%), Query Frame = 0


Query: 18  VIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGT---------------ISTHN 77
           + D+G+P LN   D F+K   V A +A + +AY  V  G                   H 
Sbjct: 21  LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNVGPPSEITGNKKHR 80

Query: 78  FEN-----------TLKKMCKEGAYWGTVAGAYVGMEYGVERIR-GTRDWKNAMIGGALT 137
           F N            +K   KE   WG  AG Y G+ YG+  +R G  DW+N+ + GALT
Sbjct: 81  FPNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALT 140

Query: 138 GA--LVSAASNNNRDKVVIDAITGGAVATAAEFIN 144
           GA   ++ +   + ++VV  A+TG A++TAA  ++
Sbjct: 141 GAAMAMTTSERTSHEQVVQSALTGAAISTAANLLS 175

[Close]

BLAST of Chy12G207900 vs. TAIR 10
Match: AT3G62880.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-06
Identity = 32/100 (32.00%), Postives = 52/100 (52.00%), Query Frame = 0


Query: 24  PFLNLTVDGFLKI---GSVAATRAAAEDAYHVVRKGTISTHNFENTLKKMCKEGAYWGTV 83
           P  +LTV+  L++   G +    A   DA  +   G +S  +F    K + + G   G V
Sbjct: 10  PCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSG-VSQASF--VAKSIGRFGFQCGLV 69

Query: 84  AGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 121
           +G +     G++R RG  DW NA++GGA+ GA V+ ++ N
Sbjct: 70  SGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRN 106

[Close]

BLAST of Chy12G207900 vs. TAIR 10
Match: AT3G62880.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-06
Identity = 32/100 (32.00%), Postives = 52/100 (52.00%), Query Frame = 0


Query: 24  PFLNLTVDGFLKI---GSVAATRAAAEDAYHVVRKGTISTHNFENTLKKMCKEGAYWGTV 83
           P  +LTV+  L++   G +    A   DA  +   G +S  +F    K + + G   G V
Sbjct: 10  PCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSG-VSQASF--VAKSIGRFGFQCGLV 69

Query: 84  AGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 121
           +G +     G++R RG  DW NA++GGA+ GA V+ ++ N
Sbjct: 70  SGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRN 106

The following BLAST results are available for this feature:

BLAST of Chy12G207900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q41050	2.9e-65	78.77	Outer envelope pore protein 16, chloroplastic OS=Pisum sativum OX=3888 GN=OEP16 ...	[more]
Q9ZV24	5.4e-48	59.44	Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q0WMZ5	6.1e-15	31.61	Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LZH8	1.5e-05	32.00	Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Chy12G207900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BDN0	4.6e-74	96.58	Outer envelope pore protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C572	4.6e-74	96.58	outer envelope pore protein 16, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1HZI5	6.6e-73	94.52	outer envelope pore protein 16, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1HJY9	6.6e-73	94.52	outer envelope pore protein 16, chloroplastic OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5N6R1E6	2.9e-68	86.99	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009013 PE=4 SV=1	[more]

BLAST of Chy12G207900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893818.1	5.32e-98	95.89	outer envelope pore protein 16, chloroplastic [Benincasa hispida]	[more]
XP_008457483.1	3.08e-97	96.58	PREDICTED: outer envelope pore protein 16, chloroplastic [Cucumis melo] >TYJ9741...	[more]
XP_022964801.1	1.03e-95	94.52	outer envelope pore protein 16, chloroplastic [Cucurbita moschata] >XP_022970582...	[more]
XP_011658142.1	2.73e-91	93.15	outer envelope pore protein 16, chloroplastic [Cucumis sativus] >KAE8653245.1 hy...	[more]
KAE8023298.1	1.30e-89	86.99	hypothetical protein FH972_009013 [Carpinus fangiana]	[more]

BLAST of Chy12G207900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28900.1	3.9e-49	59.44	outer plastid envelope protein 16-1	[more]
AT4G16160.1	1.1e-16	32.68	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT4G16160.2	4.3e-16	31.61	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT3G62880.1	1.1e-06	32.00	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT3G62880.2	1.1e-06	32.00	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 59..135 e-value: 9.6E-12 score: 45.3
None	No IPR available	PANTHER	PTHR15371	TIM23	coord: 1..144
None	No IPR available	PANTHER	PTHR15371:SF2	OUTER ENVELOPE PORE PROTEIN 16-1, CHLOROPLASTIC	coord: 1..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G207900.1	Chy12G207900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0003333	amino acid transmembrane transport
biological_process	GO:0006811	ion transport
biological_process	GO:0045037	protein import into chloroplast stroma
cellular_component	GO:0009707	chloroplast outer membrane
cellular_component	GO:0034426	etioplast membrane
cellular_component	GO:0046930	pore complex
molecular_function	GO:0015171	amino acid transmembrane transporter activity
molecular_function	GO:0015288	porin activity
molecular_function	GO:0042803	protein homodimerization activity