Chy12G207890 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G207890
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH12: 2345142 .. 2345422 (+)
RNA-Seq Expression	Chy12G207890
Synteny	Chy12G207890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTGAAAGAGAAAAATGGCTTCTGGATGCAAATGTGGTGACAATTGCTCGTGTGGAGATAGCTGCAACTGCCAATCAGGGTCCATGGTCCTCAAGCAGTAAGTAATAAGTTTTTCAAGTGTTGTTTTAGAATTAAGTATATGGTTAAATATGAATAAAAATTCAAAACTTATTATTATATATGTGTATATATCAAAGTTATATTGAATAAAATAATAATTTAGAAAATGGTTTGATTGAGAATGCAGAAGTGGATGCAGCTGTGGGGATAGCTGCTCAT

mRNA sequence

TTTGTGAAAGAGAAAAATGGCTTCTGGATGCAAATGTGGTGACAATTGCTCGTGTGGAGATAGCTGCAACTGCCAATCAGGGTCCATGGTCCTCAAGCAAAAATGGTTTGATTGAGAATGCAGAAGTGGATGCAGCTGTGGGGATAGCTGCTCAT

Coding sequence (CDS)

TTTGTGAAAGAGAAAAATGGCTTCTGGATGCAAATGTGGTGACAATTGCTCGTGTGGAGATAGCTGCAACTGCCAATCAGGGTCCATGGTCCTCAAGCAAAAATGGTTTGATTGAGAATGCAGAAGTGGATGCAGCTGTGGGGATAGCTGCTCAT

Protein sequence

FVKEKNGFWMQMW*QLLVWR*LQLPIRVHGPQAKMV*LRMQKWMQLWG*LLX

Homology

The following BLAST results are available for this feature:

BLAST of Chy12G207890 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G207890 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G207890 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G207890 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 46..47

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G207890.1	Chy12G207890.1	mRNA