Chy12G207370 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G207370
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH12: 1521685 .. 1524158 (-)
RNA-Seq Expression	Chy12G207370
Synteny	Chy12G207370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTACAAATTCAATACTTTGTGTTCATGTTCCGTCTAGAATTATTAGATCCAAAATTTATGAAGAGGGAAAGGGGAGGAGAGTTTGAAGTTTTAGATATGGTGGATTGTATGTCCAAAGTGGAGGAGCCATGGCGGAATAACAGTGCTCCGGCGGGGGATTCCGGCAAAGTGTTTGTGTGTAAAACGTGTAATAGGGAATTTTCATCGTTTCAAGCTTTGGGAGGGCATAGGGCCAGCCACAAGAAGCCCAATTCGAAAGACCCACCAACAAAGCCCAAGGCCCACGAATGTCCCATTTGTGGGCTTCATTTTCCGATAGGTCAAGCGTTGGGCGGCCACATGAGACGCCACCGCACCTCCACCACGGCCGTGGTGGTGGAGAAATCTGACGGCGGTGGAAAAAGGGGTTTTGGTTTGGATTTGAACTTAACGCCAATAGAGAACAATTTGAAATTGCAATTGACTACTCCTTTTGTAAATTGTTTTTATTAATTTCTTTTTTTTTTTTCGTTGTTGCTTATTCCACACAAATTCTTTTTTATTTTTTATTTTATATTATTGGATGTTGAATTTACTTTTCATACAAATTTTTCTTTCTTACCTCCAAAATTTTATGTGCAAATTGCAAAAATCACTTTAGAAAATCACTCCTAAAGTGTATATGTGTTGAAATTAGAACATCAAACTTACATAATTATTGAAATTGTGATAATAGTAGGTTTTAGAGTTTAGTAATTTTTATGATTTGAAAGTTTAATTTCTACAAATATTGTAAAATCGAGGTTTAATTTTGGCACTTGTAAAAATTAGGAGATCAACTTTTGCTATTGAAAATTTGAGGATGTAATTGTAACTATTGGTTGATTTTTTGTAATTTGCATGATCATTTTTATTCTTTAATATTTGATGTAAATTCAAGTTTGAAGGTAAGACTTAAGAGTAGTTGTGGAACACTAGAAAGCAAAAACATTTCGAGAAGAAGTTAAAGAGTATAAATATTATAGGTAAAAGTCATTGTTTACACAAGATTTCGAAGAAATGTAATTCGTGGAATTGAACTTTGTATATTGATGAATATTGTGAATACAGTCTCTAGTATTTACTCATTTGATGTTTTCTCTCAAATACAAGTTAAAACTTAGAATTTCTTGATCTTCGATCTTCAGGATGTTGTAGTTGCAAATCGATTTGAACATCGATCTACTGGAATCCAAAGAAAGTTTAATATTCCAAGTCTTCAATCTTTTAGAAGATGTTGATCTCGAGGTTGATACGAATTTGCACGTCTTGAAAGCTTGTAGAAGTTTGAATATTCAATTGTTCAGTACTTCAAATCTTCAATTCTTCCTTCCACCAAAGACCCCCTCAAATAAATGGTAAAGGTCTCTATTTATAGAGAAATTTCACAGGTTTTAAGTGAGCTTGGACCTATTTGTTTTGTTGGCTTGGACTTGGGCTCATTTGCTTGTTAGCTTGGGCTTGGGCCCATTTGCTTGTTGAGCTTGGGTCTGGGTCCTTCTGCTTGTTGGACTTGAGCTTGGACTTGGGCCCATTTTTCTCGGCGGGCTCGAGCCTCGATCCCTTGTTTGGCCTATTTTTCATCAAGGGTTTGAATTAGGTTGGATATGGGTAAACTTGACTACCCAAATTCAATCAAATTATAATTATCACAATTTTACTGTGATGACGTAGCGGAATTTAATTGGCCGAAATTTCTTGCTCAATGGTCACCTTTTTAGTCCTATGGCATAAGTTTCTGTTAGGCCTAGGTTTCTTTCTTTTTAATGGGAAATTCATTCAAAACCTAATCAACAACCAAACAAGCCTCATCAATAAAGGAAGTGGCAATCCAATCCGGCACAGCCATAACACACCCTTATCCCTCTCCGGCAGTTACGGATGAACATGATAGACCAAAAAATTGAGTCGATTGACCAAACCTGATTGAATCGAGAGTGATCAATCGAAAATAAGGATGGGTTTGGTCGGTGTCAGTTTGGGAAAAATATAAATCGATAACATTTTAAAAATGTTTTAAAGCTTAAATCAATATAATTTGATCGATCAACCTACTAAAGGGCGGTTTGTACTCCTTCGGGGTGTAGGTTGATTTGAAAATTTACTAAAACGACCACAGTTGGTTTGGTGGTGGGTTGATAGAAAAATAGACTCCAATTGACCAATACTTTTAATTAGCATGTGCAACAGTGATTCGAGATAATCGATGGGCCAAACCATTTGCTAAGGTGAACACCACCAGTGTAGACAAAGCCAAGGCATCGATGTCCTTAACAATAGGGGTGTAATCGAGTTGGGTTGGGTTGGGTTGGGAGACATTCTCAACCCAACCTATATTTTTGGTGGGTTATTTGGGTTGGCAACCTGAATAACTCGAATTAAGTTTTCAATCTAACCCAACCTAACCCGTAAAATATGGGTTGGGTAGGGTTGTCGAGCTGTATTTTTTTTCTTT

mRNA sequence

ATTACAAATTCAATACTTTGTGTTCATGTTCCGTCTAGAATTATTAGATCCAAAATTTATGAAGAGGGAAAGGGGAGGAGAGTTTGAAGTTTTAGATATGGTGGATTGTATGTCCAAAGTGGAGGAGCCATGGCGGAATAACAGTGCTCCGGCGGGGGATTCCGGCAAAGTGTTTGTGTGTAAAACGTGTAATAGGGAATTTTCATCGTTTCAAGCTTTGGGAGGGCATAGGGCCAGCCACAAGAAGCCCAATTCGAAAGACCCACCAACAAAGCCCAAGGCCCACGAATGTCCCATTTGTGGGCTTCATTTTCCGATAGGTCAAGCGTTGGGCGGCCACATGAGACGCCACCGCACCTCCACCACGGCCGTGGTGGTGGAGAAATCTGACGGCGGTGGAAAAAGGGGTTTTGGTTTGGATTTGAACTTAACGCCAATAGAGAACAATTTGAAATTGCAATTGACTACTCCTTTTGTAAATTGTTTTTATTAATTTCTTTTTTTTTTTTCGTTGTTGCTTATTCCACACAAATTCTTTTTTATTTTTTATTTTATATTATTGGATGTTGAATTTACTTTTCATACAACTGTATTTTTTTTCTTT

Coding sequence (CDS)

ATTACAAATTCAATACTTTGTGTTCATGTTCCGTCTAGAATTATTAGATCCAAAATTTATGAAGAGGGAAAGGGGAGGAGAGTTTGAAGTTTTAGATATGGTGGATTGTATGTCCAAAGTGGAGGAGCCATGGCGGAATAACAGTGCTCCGGCGGGGGATTCCGGCAAAGTGTTTGTGTGTAAAACGTGTAATAGGGAATTTTCATCGTTTCAAGCTTTGGGAGGGCATAGGGCCAGCCACAAGAAGCCCAATTCGAAAGACCCACCAACAAAGCCCAAGGCCCACGAATGTCCCATTTGTGGGCTTCATTTTCCGATAGGTCAAGCGTTGGGCGGCCACATGAGACGCCACCGCACCTCCACCACGGCCGTGGTGGTGGAGAAATCTGACGGCGGTGGAAAAAGGGGTTTTGGTTTGGATTTGAACTTAACGCCAATAGAGAACAATTTGAAATTGCAATTGACTACTCCTTTTGTAAATTGTTTTTATTAATTTCTTTTTTTTTTTTCGTTGTTGCTTATTCCACACAAATTCTTTTTTATTTTTTATTTTATATTATTGGATGTTGAATTTACTTTTCATACAACTGTATTTTTTTTCTTT

Protein sequence

ITNSILCVHVPSRIIRSKIYEEGKGRRV*SFRYGGLYVQSGGAMAE*QCSGGGFRQSVCV*NV**GIFIVSSFGRA*GQPQEAQFERPTNKAQGPRMSHLWASFSDRSSVGRPHETPPHLHHGRGGGEI*RRWKKGFWFGFELNANREQFEIAIDYSFCKLFLLISFFFFVVAYSTQILFYFLFYIIGC*IYFSYNCIFFLX

Homology

The following BLAST results are available for this feature:

BLAST of Chy12G207370 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G207370 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G207370 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G207370 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G207370.1	Chy12G207370.1	mRNA