Chy12G207000 (gene) Cucumber (hystrix) v1

Overview
NameChy12G207000
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptiontranscription factor IIIB 50 kDa subunit
LocationchrH12: 1081797 .. 1083377 (-)
RNA-Seq ExpressionChy12G207000
SyntenyChy12G207000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCGGCTCTTGTAAGAATTGCCACAGCAGGTCCATCTTCCGAGACGATGTTTCCGGAAACCAGATTTGCTCCTCCTGCGGAATTGTTCAGGAATTTGACAATTATGAGGCTCAGCTTGGGGGTATCAATGGTCCACAAGGCACATTCGTCCGCGTTGGAACATCAGGTTCGGGCAGCGTTTTGAATTATAAGGACAAGAAGATCTATGAGGCTCAAAAAGTTATTGAAGATATTACGTTTAGGTTAGGATTTTCTGCTTCTAAATCCAATGATGTTAGGATTTTAGTATCGACGATTACAGAGGGCGAGTATGGATTAGGTGATTGGTTCCCAATTCTCGTTGGTGCTTGTGCGTACGTTTCTATGCGCAAGGATAGTCGGCCATTATCAATGTCAGAAGTTGCATCTGCCGTCGAATGTGATCTTCATGAACTTGGCAGAATGGTTATGAGAGTTGTTGAATTTTTGGATTTGAGAGGGTCTGAGTTTCCGGTGTTTGATATTGTGGGGTCATTAGAGCGGGCCGCTAGGAATTCACCTTCTTTCTCAAGACTAGAAGCTGATATTCTTGAGAGAATTGTTAATCAAGGAATTTTTTTGCTACAATGTGCTATGAAATGGTTTCTGACAACTGGGCGACAACCGCTTCCAATGGTGGCTGCCGTGTTAGTTCTGGTGTCGAAATTGAATGAGGTTGATGTTAGTATTGAGAATGTAGCAATGGAGGTTCATGCGAACGTTTCAACATGTAAGAAGAGGTATAGGGAACTTCTGGAGGCACTTGTGAAAGTTGGAAAAAAGTTGCCTTGGGGAAAAGATATCACGACAAAGAATATTGTAAAGAATGCTCCTTTTGTGATTCAATATATGGAATTGAAATCAATGTCAAATGCCAGTGGTAAGGGGAAGGACTTGGAGAATGTGGGGATTGATTTGCAGTCTGCAGTGAGTGAGTGTTTAAGAAAAGAGCTTGAGTATGAGAGTGAGGTTAATAATTTAGAAGACGATTCTCAGTATTTTGAGTTACAACGCAGTAGATGGTGCAATGAATCGAATCGTGATAATGGGAACAGGCTCAATATTTCACATGAATGTTTATCCTTAATTTATAATAAATTTTTAGATGAAATGGCTGAGCTCAGGTCGTTGGGTGGTATTAATGAGGTCTATGGTAGAAAGCAGGGAAGAAAAGCTGGTTTTTACCCAAGTACAGAGTGGTGGGAGGGAAAATCAGAATTAAGCAAAAAGCTTCTATTGCAGCAATTATTGGAGACTGATATAGGGTCGCAGGGTATCCCCCCACCATCATTTGTTTCTAATTGCAATGCATACGAAAGGAGGAAGGAGAAAGTAAACGCTGCTAAGAAGCGAATCCAGAGGATTATGCATCCTTCAAATGCTCCAGCTGATGATGTAAATATTAAGAAGAAAAGAAAGCGTAAGGGAGCTGATGTTATAGAATGGGAAGATATAATAATTGAAACCCTTCTTCTCCATGGAGTGCAGGAGGAGGAAATTGAGAAGGGCCATTACAAGGTCTTGTTGGATTTGTACGTCTTCACTTCTTCAACTTTTTAG

mRNA sequence

ATGTCCGGCTCTTGTAAGAATTGCCACAGCAGGTCCATCTTCCGAGACGATGTTTCCGGAAACCAGATTTGCTCCTCCTGCGGAATTGTTCAGGAATTTGACAATTATGAGGCTCAGCTTGGGGGTATCAATGGTCCACAAGGCACATTCGTCCGCGTTGGAACATCAGGTTCGGGCAGCGTTTTGAATTATAAGGACAAGAAGATCTATGAGGCTCAAAAAGTTATTGAAGATATTACGTTTAGGTTAGGATTTTCTGCTTCTAAATCCAATGATGTTAGGATTTTAGTATCGACGATTACAGAGGGCGAGTATGGATTAGGTGATTGGTTCCCAATTCTCGTTGGTGCTTGTGCGTACGTTTCTATGCGCAAGGATAGTCGGCCATTATCAATGTCAGAAGTTGCATCTGCCGTCGAATGTGATCTTCATGAACTTGGCAGAATGGTTATGAGAGTTGTTGAATTTTTGGATTTGAGAGGGTCTGAGTTTCCGGTGTTTGATATTGTGGGGTCATTAGAGCGGGCCGCTAGGAATTCACCTTCTTTCTCAAGACTAGAAGCTGATATTCTTGAGAGAATTGTTAATCAAGGAATTTTTTTGCTACAATGTGCTATGAAATGGTTTCTGACAACTGGGCGACAACCGCTTCCAATGGTGGCTGCCGTGTTAGTTCTGGTGTCGAAATTGAATGAGGTTGATGTTAGTATTGAGAATGTAGCAATGGAGGTTCATGCGAACGTTTCAACATGTAAGAAGAGGTATAGGGAACTTCTGGAGGCACTTGTGAAAGTTGGAAAAAAGTTGCCTTGGGGAAAAGATATCACGACAAAGAATATTGTAAAGAATGCTCCTTTTGTGATTCAATATATGGAATTGAAATCAATGTCAAATGCCAGTGGTAAGGGGAAGGACTTGGAGAATGTGGGGATTGATTTGCAGTCTGCAGTGAGTGAGTGTTTAAGAAAAGAGCTTGAGTATGAGAGTGAGGTTAATAATTTAGAAGACGATTCTCAGTATTTTGAGTTACAACGCAGTAGATGGTGCAATGAATCGAATCGTGATAATGGGAACAGGCTCAATATTTCACATGAATGTTTATCCTTAATTTATAATAAATTTTTAGATGAAATGGCTGAGCTCAGGTCGTTGGGTGGTATTAATGAGGTCTATGGTAGAAAGCAGGGAAGAAAAGCTGGTTTTTACCCAAGTACAGAGTGGTGGGAGGGAAAATCAGAATTAAGCAAAAAGCTTCTATTGCAGCAATTATTGGAGACTGATATAGGGTCGCAGGGTATCCCCCCACCATCATTTGTTTCTAATTGCAATGCATACGAAAGGAGGAAGGAGAAAGTAAACGCTGCTAAGAAGCGAATCCAGAGGATTATGCATCCTTCAAATGCTCCAGCTGATGATGTAAATATTAAGAAGAAAAGAAAGCGTAAGGGAGCTGATGTTATAGAATGGGAAGATATAATAATTGAAACCCTTCTTCTCCATGGAGTGCAGGAGGAGGAAATTGAGAAGGGCCATTACAAGGTCTTGTTGGATTTGTACGTCTTCACTTCTTCAACTTTTTAG

Coding sequence (CDS)

ATGTCCGGCTCTTGTAAGAATTGCCACAGCAGGTCCATCTTCCGAGACGATGTTTCCGGAAACCAGATTTGCTCCTCCTGCGGAATTGTTCAGGAATTTGACAATTATGAGGCTCAGCTTGGGGGTATCAATGGTCCACAAGGCACATTCGTCCGCGTTGGAACATCAGGTTCGGGCAGCGTTTTGAATTATAAGGACAAGAAGATCTATGAGGCTCAAAAAGTTATTGAAGATATTACGTTTAGGTTAGGATTTTCTGCTTCTAAATCCAATGATGTTAGGATTTTAGTATCGACGATTACAGAGGGCGAGTATGGATTAGGTGATTGGTTCCCAATTCTCGTTGGTGCTTGTGCGTACGTTTCTATGCGCAAGGATAGTCGGCCATTATCAATGTCAGAAGTTGCATCTGCCGTCGAATGTGATCTTCATGAACTTGGCAGAATGGTTATGAGAGTTGTTGAATTTTTGGATTTGAGAGGGTCTGAGTTTCCGGTGTTTGATATTGTGGGGTCATTAGAGCGGGCCGCTAGGAATTCACCTTCTTTCTCAAGACTAGAAGCTGATATTCTTGAGAGAATTGTTAATCAAGGAATTTTTTTGCTACAATGTGCTATGAAATGGTTTCTGACAACTGGGCGACAACCGCTTCCAATGGTGGCTGCCGTGTTAGTTCTGGTGTCGAAATTGAATGAGGTTGATGTTAGTATTGAGAATGTAGCAATGGAGGTTCATGCGAACGTTTCAACATGTAAGAAGAGGTATAGGGAACTTCTGGAGGCACTTGTGAAAGTTGGAAAAAAGTTGCCTTGGGGAAAAGATATCACGACAAAGAATATTGTAAAGAATGCTCCTTTTGTGATTCAATATATGGAATTGAAATCAATGTCAAATGCCAGTGGTAAGGGGAAGGACTTGGAGAATGTGGGGATTGATTTGCAGTCTGCAGTGAGTGAGTGTTTAAGAAAAGAGCTTGAGTATGAGAGTGAGGTTAATAATTTAGAAGACGATTCTCAGTATTTTGAGTTACAACGCAGTAGATGGTGCAATGAATCGAATCGTGATAATGGGAACAGGCTCAATATTTCACATGAATGTTTATCCTTAATTTATAATAAATTTTTAGATGAAATGGCTGAGCTCAGGTCGTTGGGTGGTATTAATGAGGTCTATGGTAGAAAGCAGGGAAGAAAAGCTGGTTTTTACCCAAGTACAGAGTGGTGGGAGGGAAAATCAGAATTAAGCAAAAAGCTTCTATTGCAGCAATTATTGGAGACTGATATAGGGTCGCAGGGTATCCCCCCACCATCATTTGTTTCTAATTGCAATGCATACGAAAGGAGGAAGGAGAAAGTAAACGCTGCTAAGAAGCGAATCCAGAGGATTATGCATCCTTCAAATGCTCCAGCTGATGATGTAAATATTAAGAAGAAAAGAAAGCGTAAGGGAGCTGATGTTATAGAATGGGAAGATATAATAATTGAAACCCTTCTTCTCCATGGAGTGCAGGAGGAGGAAATTGAGAAGGGCCATTACAAGGTCTTGTTGGATTTGTACGTCTTCACTTCTTCAACTTTTTAG

Protein sequence

MSGSCKNCHSRSIFRDDVSGNQICSSCGIVQEFDNYEAQLGGINGPQGTFVRVGTSGSGSVLNYKDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAYVSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNSPSFSRLEADILERIVNQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIENVAMEVHANVSTCKKRYRELLEALVKVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNASGKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQRSRWCNESNRDNGNRLNISHECLSLIYNKFLDEMAELRSLGGINEVYGRKQGRKAGFYPSTEWWEGKSELSKKLLLQQLLETDIGSQGIPPPSFVSNCNAYERRKEKVNAAKKRIQRIMHPSNAPADDVNIKKKRKRKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLYVFTSSTF*
Homology
[Close]
BLAST of Chy12G207000 vs. ExPASy Swiss-Prot
Match: O81787 (Plant-specific TFIIB-related protein PTF2 OS=Arabidopsis thaliana OX=3702 GN=PTF2 PE=1 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 5.0e-128
Identity = 247/534 (46.25%), Postives = 353/534 (66.10%), Query Frame = 0 

Query: 5   CKNCHSRSIFRDDVSGNQICSSCGIVQEFDNYEAQLGGINGPQGTFVRVGTSGSGSVLNY 64
           CK C+  +  RD+ +GN  C  CG ++E+DNYEAQLGGI GPQGT++RVGT G GSVL+Y
Sbjct: 3   CKRCNGSNFERDEDTGNSYCGGCGTLREYDNYEAQLGGIRGPQGTYIRVGTIGRGSVLDY 62

Query: 65  KDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAYVSMR 124
           KDKKIYEA  +IE+ T RL    +K+  ++ ++S +T+GE+G G+WFPIL+GAC Y  +R
Sbjct: 63  KDKKIYEANNLIEETTERLNL-GNKTEVIKSMISKLTDGEFGQGEWFPILIGACCYAVVR 122

Query: 125 KDSR-PLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNSPSF 184
           ++ +  LSM EVA  V CDLH+LG M+ RVV+ LDL   E   FD+VG   +   NSP  
Sbjct: 123 EEGKGVLSMEEVAYEVGCDLHQLGPMIKRVVDHLDL---ELREFDLVGLFTKTVTNSPRL 182

Query: 185 SRLEADILERIVNQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIENVAME 244
           + ++ D  E+I+ QG FL+ CA+KWFL+TGR+P+P+V AVL  V ++N V V I+++A +
Sbjct: 183 TDVDRDKKEKIIKQGTFLMNCALKWFLSTGRRPMPLVVAVLAFVVQVNGVKVKIDDLAKD 242

Query: 245 VHANVSTCKKRYRELLEALVKVGKK--LPWGKDITTKNIVKNAPFVIQYMELKSM-SNAS 304
              +++TCK RY+EL E LVKV ++  LPW KD+T KN++K++  +   ME KSM     
Sbjct: 243 ASVSLTTCKTRYKELSEKLVKVAEEVGLPWAKDVTVKNVLKHSGTLFALMEAKSMKKRKQ 302

Query: 305 GKGKDLENV-GIDLQSAVSECLRKELEYESEVNNLEDD-SQYFELQRSRWCNESNRDNGN 364
           G GK+L    G  ++  V +CL KE  Y  + +  +D  S+YF+++  R  +  N D+  
Sbjct: 303 GTGKELVRTDGFCVEDLVMDCLSKESMYCYDDDARQDTMSRYFDVEGERQLSLCNYDD-- 362

Query: 365 RLNISHECLSLIYNKFLDEMA----ELRSLGGINEVYGRKQGRKAGFYPSTEWWEGKSEL 424
             NIS   LS  YN+F D +       RS G    ++ R+     G   +  WW+GKSEL
Sbjct: 363 --NISENQLSTKYNEFEDRVCGGTLAKRSQGSSQSMWQRRS--VFGMVSTENWWKGKSEL 422

Query: 425 SKKLLLQQLLETDIGSQGIPPPSFVSNCNAYERRKEKVNAAKKRIQRIMHPSNAPAD--- 484
           SK+LLL+ LLE D+G + + PPS++  C A ERR+EK+ AAK RI  I HPS+  ++   
Sbjct: 423 SKRLLLKDLLEKDVGLEAL-PPSYIKGCVAVERRREKIKAAKLRINAIQHPSDNVSEGAL 482

Query: 485 --DVNIKKKRKRKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLYVFTS 524
             ++   KK+++KG++ I+WED++I+TL+LH V EEEIEKGHYK LLDL+VF S
Sbjct: 483 SLELEHSKKKRKKGSE-IDWEDLVIQTLVLHNVNEEEIEKGHYKTLLDLHVFNS 524

[Close]
BLAST of Chy12G207000 vs. ExPASy Swiss-Prot
Match: A8KBY2 (Transcription factor IIIB 50 kDa subunit OS=Danio rerio OX=7955 GN=brf2 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 6.8e-08
Identity = 46/171 (26.90%), Postives = 85/171 (49.71%), Query Frame = 0 

Query: 113 ILVGACAYVSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGS 172
           IL G C +   R++S P+ M  +   ++ D +++G +   + + L+L+ ++  +  ++ S
Sbjct: 114 ILAGCCMFHICRQNSWPVFMGTIGYLLDADNYQMGTIYQELTKSLNLQTTQVCITRMLES 173

Query: 173 LERAARNSP-SFSRLEADILERIVNQGIFLLQCAMKWFLTTGRQPLPM-VAAVLVLVSKL 232
                + +P     + +   +R+V+Q   LL+ A   ++ TGR+P P+ +AAV V    L
Sbjct: 174 FCYDFKLAPDEVEEVFSVAQQRLVDQTSALLELAADTWILTGRRPFPLFLAAVYVAWQSL 233

Query: 233 N---EVDVSIENVAMEVHA-------NVSTCKKRYRELLEALVKVGKKLPW 272
           N    +  S+        A       +  T  KR  ELLE L K+G++LPW
Sbjct: 234 NPLARMKYSLMKFCKIAKAPEQLWCKSKDTINKRLNELLEVLCKLGRELPW 284

[Close]
BLAST of Chy12G207000 vs. ExPASy Swiss-Prot
Match: Q4R318 (Transcription factor IIIB 50 kDa subunit OS=Macaca fascicularis OX=9541 GN=BRF2 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.2e-07
Identity = 47/188 (25.00%), Postives = 94/188 (50.00%), Query Frame = 0 

Query: 113 ILVGACAYVSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVG- 172
           +LVG C  ++ R+ + PL+M  + + +  DL     + M++V+ L L      + ++V  
Sbjct: 116 VLVGCCVLITCRQHNWPLTMGAICTLLYADLDVFSSIYMQIVKLLGLDMPSLCLAELVKT 175

Query: 173 --SLERAARNSPSFSRLEADILERIVNQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLV-S 232
             S  +  + SPS      +  E+++++ + L++ A + +L TGR PLP++ A   L   
Sbjct: 176 YCSSFKLFQASPSVPAKYVEDKEKMLSRTLQLVELANETWLVTGRHPLPVITAATFLAWQ 235

Query: 233 KLNEVD-VSIENVAMEVHANVS---TCKKRYRELLEALVKVGKKLPWGK--DITTKNIVK 291
            L   D +S         ANV        R +ELL  L+++ ++L W +   +  +++VK
Sbjct: 236 SLQPADRLSCSLARFCKLANVDLPYPASSRLQELLAVLLRMAEQLAWLRVLRLDKRSVVK 295

[Close]
BLAST of Chy12G207000 vs. ExPASy Swiss-Prot
Match: Q9HAW0 (Transcription factor IIIB 50 kDa subunit OS=Homo sapiens OX=9606 GN=BRF2 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-07
Identity = 47/190 (24.74%), Postives = 94/190 (49.47%), Query Frame = 0 

Query: 113 ILVGACAYVSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVG- 172
           +LVG C  ++ R+ + PL+M  + + +  DL       M++V+ L L      + ++V  
Sbjct: 116 VLVGCCVLITCRQHNWPLTMGAICTLLYADLDVFSSTYMQIVKLLGLDVPSLCLAELVKT 175

Query: 173 --SLERAARNSPSFSRLEADILERIVNQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLV-S 232
             S  +  + SPS      +  E+++++ + L++ A + +L TGR PLP++ A   L   
Sbjct: 176 YCSSFKLFQASPSVPAKYVEDKEKMLSRTMQLVELANETWLVTGRHPLPVITAATFLAWQ 235

Query: 233 KLNEVD-VSIENVAMEVHANVS---TCKKRYRELLEALVKVGKKLPWGK--DITTKNIVK 292
            L   D +S         ANV        R +ELL  L+++ ++L W +   +  +++VK
Sbjct: 236 SLQPADRLSCSLARFCKLANVDLPYPASSRLQELLAVLLRMAEQLAWLRVLRLDKRSVVK 295

[Close]
BLAST of Chy12G207000 vs. ExPASy Swiss-Prot
Match: Q4V8D6 (Transcription factor IIIB 50 kDa subunit OS=Rattus norvegicus OX=10116 GN=Brf2 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.4e-07
Identity = 46/191 (24.08%), Postives = 94/191 (49.21%), Query Frame = 0 

Query: 113 ILVGACAYVSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGS 172
           ++VG C  ++ R+ + PL+M  + + +  DL       M++V+ L L      + D+V S
Sbjct: 116 VVVGCCVLITCRQHNWPLTMGAICTLLYADLDVFSSTYMQIVKLLGLDVPSLCLADLVKS 175

Query: 173 L---ERAARNSPSFSRLEADILERIVNQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLV-S 232
                +  + SPS      +  ++++++ + L++ A + +L TGR PLP++ A   L   
Sbjct: 176 YCSSFKLFQASPSMPAKYVEDKDKMLSRTLLLVELANETWLVTGRHPLPIITAATFLAWQ 235

Query: 233 KLNEVDVSIENVAMEVH-ANVS---TCKKRYRELLEALVKVGKKLPWGK--DITTKNIVK 292
            L   D    ++A     ANV        R +ELL  L+++  +L W +   +  +++VK
Sbjct: 236 SLRPSDRLTCSLARFCKLANVDLPYPAASRLQELLAVLLQMASQLAWLQVLRLDKRSVVK 295

Query: 293 NAPFVIQYMEL 294
           +   ++Q+  +
Sbjct: 296 HIGDLLQHRHM 306

[Close]
BLAST of Chy12G207000 vs. ExPASy TrEMBL
Match: A0A0A0M0A0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G477510 PE=4 SV=1)

HSP 1 Score: 1003.4 bits (2593), Expect = 3.4e-289
Identity = 510/526 (96.96%), Postives = 514/526 (97.72%), Query Frame = 0 

Query: 1   MSGSCKNCHSRSIFRDDVSGNQICSSCGIVQEFDNYEAQLGGINGPQGTFVRVGTSGSGS 60
           MSGSCKNCHSRSIFRDDVSGNQICSSCGIVQEFDNY+AQLGGINGPQGTFVRVGTSGSGS
Sbjct: 1   MSGSCKNCHSRSIFRDDVSGNQICSSCGIVQEFDNYDAQLGGINGPQGTFVRVGTSGSGS 60

Query: 61  VLNYKDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
           VLNYKDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY
Sbjct: 61  VLNYKDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120

Query: 121 VSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNS 180
           VSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNS
Sbjct: 121 VSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNS 180

Query: 181 PSFSRLEADILERIVNQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIENV 240
           PSFSRLEADILERIV QGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIENV
Sbjct: 181 PSFSRLEADILERIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIENV 240

Query: 241 AMEVHANVSTCKKRYRELLEALVKVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
            MEVHANVSTCKKRYRELLEALV+VGKKLPWGKDITTKNIVKNAPFVIQYMELKSMS AS
Sbjct: 241 GMEVHANVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSKAS 300

Query: 301 GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQRSRWCNESNRDNGNRL 360
           GKGKDLENV IDLQSAVSECLRKELEYESEV NLEDDSQYFELQRSRW +ESNRDNGNRL
Sbjct: 301 GKGKDLENVEIDLQSAVSECLRKELEYESEVYNLEDDSQYFELQRSRWQDESNRDNGNRL 360

Query: 361 NISHECLSLIYNKFLDEMAELRSLGGINEVYGRKQGRKAGFYPSTEWWEGKSELSKKLLL 420
           NISHECLSLIYNKFLDEMAELRS GGINEVYG KQGRK GFY STEWWEGKSELSKKLLL
Sbjct: 361 NISHECLSLIYNKFLDEMAELRSSGGINEVYGTKQGRKTGFYSSTEWWEGKSELSKKLLL 420

Query: 421 QQLLETDIGSQGIPPPSFVSNCNAYERRKEKVNAAKKRIQRIMHPSNAPADDVNIKKKRK 480
           QQLLETDIGSQGI PPSFVS+CNAYERRKEKVNAAKKRIQRIMHPS APADDVNIKKKRK
Sbjct: 421 QQLLETDIGSQGI-PPSFVSSCNAYERRKEKVNAAKKRIQRIMHPSTAPADDVNIKKKRK 480

Query: 481 RKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLYVFTSSTF 527
           RKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLYVFTSSTF
Sbjct: 481 RKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLYVFTSSTF 525

[Close]
BLAST of Chy12G207000 vs. ExPASy TrEMBL
Match: A0A5A7UMA0 (Transcription factor IIIB 50 kDa subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002190 PE=4 SV=1)

HSP 1 Score: 994.6 bits (2570), Expect = 1.6e-286
Identity = 503/526 (95.63%), Postives = 516/526 (98.10%), Query Frame = 0 

Query: 1   MSGSCKNCHSRSIFRDDVSGNQICSSCGIVQEFDNYEAQLGGINGPQGTFVRVGTSGSGS 60
           MSGSCK+C+SRSIFRDDVSGN ICSSCGIVQEF+NYEAQLGGINGPQGTFVRVGTSGSGS
Sbjct: 1   MSGSCKDCNSRSIFRDDVSGNLICSSCGIVQEFENYEAQLGGINGPQGTFVRVGTSGSGS 60

Query: 61  VLNYKDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
           VLNYKDKK+YEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY
Sbjct: 61  VLNYKDKKVYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120

Query: 121 VSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNS 180
           VSMRKD+RPLSMSEVASAVECDLHELGRMVMRVV+FLDLRGSEFPVFDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLSMSEVASAVECDLHELGRMVMRVVDFLDLRGSEFPVFDIVGSLERAARNS 180

Query: 181 PSFSRLEADILERIVNQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIENV 240
           PSFSRLEADILERIV QGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVS+ENV
Sbjct: 181 PSFSRLEADILERIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSMENV 240

Query: 241 AMEVHANVSTCKKRYRELLEALVKVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
           AMEVHA VSTCKKRYRELLEALV+VGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS
Sbjct: 241 AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300

Query: 301 GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQRSRWCNESNRDNGNRL 360
           GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQ SRWC+ESN DNGNRL
Sbjct: 301 GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQGSRWCDESNCDNGNRL 360

Query: 361 NISHECLSLIYNKFLDEMAELRSLGGINEVYGRKQGRKAGFYPSTEWWEGKSELSKKLLL 420
           NISHECLSLIYNKFLDEMAELRS GGIN+VYGRKQGRKAGFY STEWWEGKS LSKKLLL
Sbjct: 361 NISHECLSLIYNKFLDEMAELRSSGGINDVYGRKQGRKAGFYSSTEWWEGKSVLSKKLLL 420

Query: 421 QQLLETDIGSQGIPPPSFVSNCNAYERRKEKVNAAKKRIQRIMHPSNAPADDVNIKKKRK 480
           QQLLETDIGSQGI PPSFVS+CNAY+RRKEKVNAAKKRIQRIMHPSNAPA DVNIKKKRK
Sbjct: 421 QQLLETDIGSQGI-PPSFVSSCNAYKRRKEKVNAAKKRIQRIMHPSNAPAGDVNIKKKRK 480

Query: 481 RKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLYVFTSSTF 527
           RKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDL+VFTSSTF
Sbjct: 481 RKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLHVFTSSTF 525

[Close]
BLAST of Chy12G207000 vs. ExPASy TrEMBL
Match: A0A1S3B6X4 (transcription factor IIIB 50 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103486826 PE=4 SV=1)

HSP 1 Score: 994.6 bits (2570), Expect = 1.6e-286
Identity = 503/526 (95.63%), Postives = 516/526 (98.10%), Query Frame = 0 

Query: 1   MSGSCKNCHSRSIFRDDVSGNQICSSCGIVQEFDNYEAQLGGINGPQGTFVRVGTSGSGS 60
           MSGSCK+C+SRSIFRDDVSGN ICSSCGIVQEF+NYEAQLGGINGPQGTFVRVGTSGSGS
Sbjct: 1   MSGSCKDCNSRSIFRDDVSGNLICSSCGIVQEFENYEAQLGGINGPQGTFVRVGTSGSGS 60

Query: 61  VLNYKDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
           VLNYKDKK+YEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY
Sbjct: 61  VLNYKDKKVYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120

Query: 121 VSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNS 180
           VSMRKD+RPLSMSEVASAVECDLHELGRMVMRVV+FLDLRGSEFPVFDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLSMSEVASAVECDLHELGRMVMRVVDFLDLRGSEFPVFDIVGSLERAARNS 180

Query: 181 PSFSRLEADILERIVNQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIENV 240
           PSFSRLEADILERIV QGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVS+ENV
Sbjct: 181 PSFSRLEADILERIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSMENV 240

Query: 241 AMEVHANVSTCKKRYRELLEALVKVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
           AMEVHA VSTCKKRYRELLEALV+VGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS
Sbjct: 241 AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300

Query: 301 GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQRSRWCNESNRDNGNRL 360
           GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQ SRWC+ESN DNGNRL
Sbjct: 301 GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQGSRWCDESNCDNGNRL 360

Query: 361 NISHECLSLIYNKFLDEMAELRSLGGINEVYGRKQGRKAGFYPSTEWWEGKSELSKKLLL 420
           NISHECLSLIYNKFLDEMAELRS GGIN+VYGRKQGRKAGFY STEWWEGKS LSKKLLL
Sbjct: 361 NISHECLSLIYNKFLDEMAELRSSGGINDVYGRKQGRKAGFYSSTEWWEGKSVLSKKLLL 420

Query: 421 QQLLETDIGSQGIPPPSFVSNCNAYERRKEKVNAAKKRIQRIMHPSNAPADDVNIKKKRK 480
           QQLLETDIGSQGI PPSFVS+CNAY+RRKEKVNAAKKRIQRIMHPSNAPA DVNIKKKRK
Sbjct: 421 QQLLETDIGSQGI-PPSFVSSCNAYKRRKEKVNAAKKRIQRIMHPSNAPAGDVNIKKKRK 480

Query: 481 RKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLYVFTSSTF 527
           RKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDL+VFTSSTF
Sbjct: 481 RKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLHVFTSSTF 525

[Close]
BLAST of Chy12G207000 vs. ExPASy TrEMBL
Match: A0A6J1JZD6 (plant-specific TFIIB-related protein PTF2 OS=Cucurbita maxima OX=3661 GN=LOC111490217 PE=4 SV=1)

HSP 1 Score: 857.8 bits (2215), Expect = 2.3e-245
Identity = 432/523 (82.60%), Postives = 474/523 (90.63%), Query Frame = 0 

Query: 1   MSGSCKNCHSRSIFRDDVSGNQICSSCGIVQEFDNYEAQLGGINGPQGTFVRVGTSGSGS 60
           MSGSCKNC  RS+FRDDVSGN ICSSCGIVQEFDNY+AQLGG+NGPQGTFVRVGTSGSGS
Sbjct: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60

Query: 61  VLNYKDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
           VLNYKDKKIYEAQK+IEDITFRLGFSASKSNDVRILVSTITEGEYG GDWF ILVGAC+Y
Sbjct: 61  VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120

Query: 121 VSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNS 180
           VSMRKD+RPL MSEVAS +ECDLHELGRMV+RVV+FLDL+G  FP FDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPGFDIVGSLERAARNS 180

Query: 181 PSFSRLEADILERIVNQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIENV 240
           PSFS++EAD L+ IV QGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVS LNEV+VSI++V
Sbjct: 181 PSFSKVEADTLDIIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240

Query: 241 AMEVHANVSTCKKRYRELLEALVKVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
           AMEVHA VSTCKKRYRELL ALV+VGKKLPWGKDIT +NIVKNAPFVIQYMELKSMSN  
Sbjct: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300

Query: 301 GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQRSRWCNESNRDNGNRL 360
           G+GK+ E+VGIDLQ+AVSECLRKEL+YESEVNNLEDDSQYFEL  + W +ES+ D+ N+L
Sbjct: 301 GQGKNFEDVGIDLQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWHDESSCDDRNKL 360

Query: 361 NISHECLSLIYNKFLDEMAELRSLGGINEVYGRKQGRKAGFYPSTEWWEGKSELSKKLLL 420
           NISHECLSLIY KFLDEMA LRS G INE+YGRK GRKAGF  STEWWEGKS+LSKKLLL
Sbjct: 361 NISHECLSLIYTKFLDEMAHLRSSGEINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420

Query: 421 QQLLETDIGSQGIPPPSFVSNCNAYERRKEKVNAAKKRIQRIMHPSNAPADDVNIKKKRK 480
            QLLETD+G  G+ PPSFV++CNAY+RRKEK+NAAK RIQRIM PS+A   DVN +K+RK
Sbjct: 421 HQLLETDVGLNGM-PPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERK 480

Query: 481 RKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLYVFTS 524
           RK A  IEWEDIIIETLLLH V+EEEIEKGHY  LLDL+VF+S
Sbjct: 481 RKRAVGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSS 522

[Close]
BLAST of Chy12G207000 vs. ExPASy TrEMBL
Match: A0A6J1GSR8 (plant-specific TFIIB-related protein PTF2 OS=Cucurbita moschata OX=3662 GN=LOC111457096 PE=4 SV=1)

HSP 1 Score: 857.8 bits (2215), Expect = 2.3e-245
Identity = 431/523 (82.41%), Postives = 473/523 (90.44%), Query Frame = 0 

Query: 1   MSGSCKNCHSRSIFRDDVSGNQICSSCGIVQEFDNYEAQLGGINGPQGTFVRVGTSGSGS 60
           MSGSCKNC  RS+FRDDVSGN ICSSCGIVQEFDNY+AQLGG+NGPQGTFVRVGTSGSGS
Sbjct: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60

Query: 61  VLNYKDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
           VLNYKDKKIYEAQ +IEDITFRLGFSASKSNDVRILVSTITEGEYG GDWF ILVGAC+Y
Sbjct: 61  VLNYKDKKIYEAQNIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120

Query: 121 VSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNS 180
           VSMRKD+RPL MSEVAS +ECDLHELGRMV+RVV+FLDL+G  FP FDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPGFDIVGSLERAARNS 180

Query: 181 PSFSRLEADILERIVNQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIENV 240
           PSFS++EAD L+ IV QGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVS LNEV+VSI++V
Sbjct: 181 PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240

Query: 241 AMEVHANVSTCKKRYRELLEALVKVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
           AMEVHA VSTCKKRYRELL ALV+VGKKLPWGKDIT +NIVKNAPFVIQYMELKSMSN  
Sbjct: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300

Query: 301 GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQRSRWCNESNRDNGNRL 360
           G+GK+ E+VGIDLQ+AVSECLRKEL+YESEVNNLEDDSQYFEL  + W +ES+ D+ N+L
Sbjct: 301 GRGKNFEDVGIDLQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360

Query: 361 NISHECLSLIYNKFLDEMAELRSLGGINEVYGRKQGRKAGFYPSTEWWEGKSELSKKLLL 420
           NISHECLSLIY KFLDEMA LRS GGINE+YGRK GRKAGF  STEWWEGKS+LSKKLLL
Sbjct: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420

Query: 421 QQLLETDIGSQGIPPPSFVSNCNAYERRKEKVNAAKKRIQRIMHPSNAPADDVNIKKKRK 480
            QLLETD+G  G+ PPSFV++CNAY+RRKEK+NAAK RIQRIM PSN    +VN +K+RK
Sbjct: 421 HQLLETDVGLNGM-PPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSNTAIGNVNAEKERK 480

Query: 481 RKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLYVFTS 524
           RK A  IEWEDIIIETLLLH V+EEEIEKGHY  LLDL+VF+S
Sbjct: 481 RKRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSS 522

[Close]
BLAST of Chy12G207000 vs. NCBI nr
Match: XP_004149065.1 (plant-specific TFIIB-related protein PTF2 [Cucumis sativus] >KGN65641.1 hypothetical protein Csa_019679 [Cucumis sativus])

HSP 1 Score: 998 bits (2580), Expect = 0.0
Identity = 510/526 (96.96%), Postives = 514/526 (97.72%), Query Frame = 0 

Query: 1   MSGSCKNCHSRSIFRDDVSGNQICSSCGIVQEFDNYEAQLGGINGPQGTFVRVGTSGSGS 60
           MSGSCKNCHSRSIFRDDVSGNQICSSCGIVQEFDNY+AQLGGINGPQGTFVRVGTSGSGS
Sbjct: 1   MSGSCKNCHSRSIFRDDVSGNQICSSCGIVQEFDNYDAQLGGINGPQGTFVRVGTSGSGS 60

Query: 61  VLNYKDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
           VLNYKDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY
Sbjct: 61  VLNYKDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120

Query: 121 VSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNS 180
           VSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNS
Sbjct: 121 VSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNS 180

Query: 181 PSFSRLEADILERIVNQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIENV 240
           PSFSRLEADILERIV QGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIENV
Sbjct: 181 PSFSRLEADILERIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIENV 240

Query: 241 AMEVHANVSTCKKRYRELLEALVKVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
            MEVHANVSTCKKRYRELLEALV+VGKKLPWGKDITTKNIVKNAPFVIQYMELKSMS AS
Sbjct: 241 GMEVHANVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSKAS 300

Query: 301 GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQRSRWCNESNRDNGNRL 360
           GKGKDLENV IDLQSAVSECLRKELEYESEV NLEDDSQYFELQRSRW +ESNRDNGNRL
Sbjct: 301 GKGKDLENVEIDLQSAVSECLRKELEYESEVYNLEDDSQYFELQRSRWQDESNRDNGNRL 360

Query: 361 NISHECLSLIYNKFLDEMAELRSLGGINEVYGRKQGRKAGFYPSTEWWEGKSELSKKLLL 420
           NISHECLSLIYNKFLDEMAELRS GGINEVYG KQGRK GFY STEWWEGKSELSKKLLL
Sbjct: 361 NISHECLSLIYNKFLDEMAELRSSGGINEVYGTKQGRKTGFYSSTEWWEGKSELSKKLLL 420

Query: 421 QQLLETDIGSQGIPPPSFVSNCNAYERRKEKVNAAKKRIQRIMHPSNAPADDVNIKKKRK 480
           QQLLETDIGSQGIPP SFVS+CNAYERRKEKVNAAKKRIQRIMHPS APADDVNIKKKRK
Sbjct: 421 QQLLETDIGSQGIPP-SFVSSCNAYERRKEKVNAAKKRIQRIMHPSTAPADDVNIKKKRK 480

Query: 481 RKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLYVFTSSTF 526
           RKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLYVFTSSTF
Sbjct: 481 RKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLYVFTSSTF 525

[Close]
BLAST of Chy12G207000 vs. NCBI nr
Match: XP_008443157.1 (PREDICTED: transcription factor IIIB 50 kDa subunit [Cucumis melo] >KAA0057033.1 transcription factor IIIB 50 kDa subunit [Cucumis melo var. makuwa])

HSP 1 Score: 989 bits (2557), Expect = 0.0
Identity = 503/526 (95.63%), Postives = 516/526 (98.10%), Query Frame = 0 

Query: 1   MSGSCKNCHSRSIFRDDVSGNQICSSCGIVQEFDNYEAQLGGINGPQGTFVRVGTSGSGS 60
           MSGSCK+C+SRSIFRDDVSGN ICSSCGIVQEF+NYEAQLGGINGPQGTFVRVGTSGSGS
Sbjct: 1   MSGSCKDCNSRSIFRDDVSGNLICSSCGIVQEFENYEAQLGGINGPQGTFVRVGTSGSGS 60

Query: 61  VLNYKDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
           VLNYKDKK+YEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY
Sbjct: 61  VLNYKDKKVYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120

Query: 121 VSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNS 180
           VSMRKD+RPLSMSEVASAVECDLHELGRMVMRVV+FLDLRGSEFPVFDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLSMSEVASAVECDLHELGRMVMRVVDFLDLRGSEFPVFDIVGSLERAARNS 180

Query: 181 PSFSRLEADILERIVNQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIENV 240
           PSFSRLEADILERIV QGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVS+ENV
Sbjct: 181 PSFSRLEADILERIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSMENV 240

Query: 241 AMEVHANVSTCKKRYRELLEALVKVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
           AMEVHA VSTCKKRYRELLEALV+VGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS
Sbjct: 241 AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300

Query: 301 GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQRSRWCNESNRDNGNRL 360
           GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQ SRWC+ESN DNGNRL
Sbjct: 301 GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQGSRWCDESNCDNGNRL 360

Query: 361 NISHECLSLIYNKFLDEMAELRSLGGINEVYGRKQGRKAGFYPSTEWWEGKSELSKKLLL 420
           NISHECLSLIYNKFLDEMAELRS GGIN+VYGRKQGRKAGFY STEWWEGKS LSKKLLL
Sbjct: 361 NISHECLSLIYNKFLDEMAELRSSGGINDVYGRKQGRKAGFYSSTEWWEGKSVLSKKLLL 420

Query: 421 QQLLETDIGSQGIPPPSFVSNCNAYERRKEKVNAAKKRIQRIMHPSNAPADDVNIKKKRK 480
           QQLLETDIGSQGIPP SFVS+CNAY+RRKEKVNAAKKRIQRIMHPSNAPA DVNIKKKRK
Sbjct: 421 QQLLETDIGSQGIPP-SFVSSCNAYKRRKEKVNAAKKRIQRIMHPSNAPAGDVNIKKKRK 480

Query: 481 RKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLYVFTSSTF 526
           RKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDL+VFTSSTF
Sbjct: 481 RKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLHVFTSSTF 525

[Close]
BLAST of Chy12G207000 vs. NCBI nr
Match: XP_038893651.1 (plant-specific TFIIB-related protein PTF2 [Benincasa hispida])

HSP 1 Score: 934 bits (2414), Expect = 0.0
Identity = 474/521 (90.98%), Postives = 496/521 (95.20%), Query Frame = 0 

Query: 1   MSGSCKNCHSRSIFRDDVSGNQICSSCGIVQEFDNYEAQLGGINGPQGTFVRVGTSGSGS 60
           MSGSCKNCHSRS+FRDDVSGN ICSSCGIVQEFDNYEAQL GINGP GTFVRVGTSGSGS
Sbjct: 1   MSGSCKNCHSRSLFRDDVSGNLICSSCGIVQEFDNYEAQLSGINGPLGTFVRVGTSGSGS 60

Query: 61  VLNYKDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
           VLNYKDKKI+EAQK+IEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY
Sbjct: 61  VLNYKDKKIFEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120

Query: 121 VSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNS 180
           VSMRKD+RPL MSEVASAVECDLHELGRMV+RVV+FLDL+G EFPVFDIVGSLERA RNS
Sbjct: 121 VSMRKDNRPLPMSEVASAVECDLHELGRMVIRVVDFLDLKGPEFPVFDIVGSLERATRNS 180

Query: 181 PSFSRLEADILERIVNQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIENV 240
           PSFSR++ADILERIV QGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSI+NV
Sbjct: 181 PSFSRVDADILERIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIDNV 240

Query: 241 AMEVHANVSTCKKRYRELLEALVKVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
           AMEVHA VSTCKKRYRELLEALVKVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS
Sbjct: 241 AMEVHAKVSTCKKRYRELLEALVKVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300

Query: 301 GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQRSRWCNESNRDNGNRL 360
           GKGKDLENVG+DLQSAVSECLRKELEYESEVNNLEDDSQYFELQ S W +ES+ DNGNRL
Sbjct: 301 GKGKDLENVGVDLQSAVSECLRKELEYESEVNNLEDDSQYFELQGSSWRDESSCDNGNRL 360

Query: 361 NISHECLSLIYNKFLDEMAELRSLGGINEVYGRKQGRKAGFYPSTEWWEGKSELSKKLLL 420
           NISHECLSLIY+KFLDEMA L+S GGINEVYGRKQGRKAGFY STEWWEGKSELSKKLLL
Sbjct: 361 NISHECLSLIYHKFLDEMAHLKSSGGINEVYGRKQGRKAGFYSSTEWWEGKSELSKKLLL 420

Query: 421 QQLLETDIGSQGIPPPSFVSNCNAYERRKEKVNAAKKRIQRIMHPSNAPADDVNIKKKRK 480
           QQLLE DIGSQGIPP SFVS+CNAY+RRKEK+ AAKKRIQRIM PSNAP  DVNI+KKRK
Sbjct: 421 QQLLEIDIGSQGIPP-SFVSSCNAYKRRKEKIIAAKKRIQRIMLPSNAPIGDVNIEKKRK 480

Query: 481 RKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLYVF 521
           RKG + IEWEDIIIETLLLHGV+EEEIEKGHY  LLDL+VF
Sbjct: 481 RKGTNGIEWEDIIIETLLLHGVKEEEIEKGHYNALLDLHVF 520

[Close]
BLAST of Chy12G207000 vs. NCBI nr
Match: XP_023542889.1 (plant-specific TFIIB-related protein PTF2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 857 bits (2213), Expect = 2.90e-310
Identity = 434/523 (82.98%), Postives = 474/523 (90.63%), Query Frame = 0 

Query: 1   MSGSCKNCHSRSIFRDDVSGNQICSSCGIVQEFDNYEAQLGGINGPQGTFVRVGTSGSGS 60
           MSGSCKNC  RS+FRDDVSGN ICSSCGIVQEFDNY+AQLGG+NGPQGTFVRVGTSGSGS
Sbjct: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60

Query: 61  VLNYKDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
           VLNYKDKKIYEAQK+IEDITFRLGFSASKSNDVRILVSTITEGEYG GDWF ILVGAC+Y
Sbjct: 61  VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120

Query: 121 VSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNS 180
           VSMRKD+RPL MSEVAS +ECDLHELGRMV+RVV+FLDL+G  FP FDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPGFDIVGSLERAARNS 180

Query: 181 PSFSRLEADILERIVNQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIENV 240
           PSFS++EAD L+ IV QGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVS LNEV+VSI++V
Sbjct: 181 PSFSKVEADTLDIIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240

Query: 241 AMEVHANVSTCKKRYRELLEALVKVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
           AMEVHA VSTCKKRYRELL ALV+VGKKLPWGKDIT +NIVKNAPFVIQYMELKSMSN  
Sbjct: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300

Query: 301 GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQRSRWCNESNRDNGNRL 360
           G+GK+ E+VGIDLQ+AVSECLRKEL+YESEVNNLEDDSQYFEL  + W +ES+ D+ N+L
Sbjct: 301 GRGKNFEDVGIDLQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360

Query: 361 NISHECLSLIYNKFLDEMAELRSLGGINEVYGRKQGRKAGFYPSTEWWEGKSELSKKLLL 420
           NISHECLSLIY KFLDEMA LRS GGINE+YGRK GRKAGF  STEWWEGKS+LSKKLLL
Sbjct: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420

Query: 421 QQLLETDIGSQGIPPPSFVSNCNAYERRKEKVNAAKKRIQRIMHPSNAPADDVNIKKKRK 480
            QLLETD+G  G+PP SFV++CNAY+RRKEK+NAAK RIQRIM PSNA   DVN +K+RK
Sbjct: 421 HQLLETDVGLNGMPP-SFVTSCNAYKRRKEKINAAKNRIQRIMLPSNAAIGDVNAEKERK 480

Query: 481 RKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLYVFTS 523
           RK A  IEWEDIIIETLLLH V+EEEIEKGHY  LLDL+VF S
Sbjct: 481 RKRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFGS 522

[Close]
BLAST of Chy12G207000 vs. NCBI nr
Match: KAG6573303.1 (Plant-specific TFIIB-related protein PTF2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 856 bits (2211), Expect = 5.85e-310
Identity = 434/523 (82.98%), Postives = 475/523 (90.82%), Query Frame = 0 

Query: 1   MSGSCKNCHSRSIFRDDVSGNQICSSCGIVQEFDNYEAQLGGINGPQGTFVRVGTSGSGS 60
           MSGSCKNC  RS+FRDDVSGN ICSSCGIVQEFDNY+AQLGG+NGPQGTFVRVGTSGSGS
Sbjct: 1   MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS 60

Query: 61  VLNYKDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY 120
           VLNYKDKKIYEAQK+IEDITFRLGFSASKSNDVRILVSTITEGEYG GDWF ILVGAC+Y
Sbjct: 61  VLNYKDKKIYEAQKIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY 120

Query: 121 VSMRKDSRPLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNS 180
           VSMRKD+RPL MSEVAS +ECDLHELGRMV+RVV+FLDL+G  FP FDIVGSLERAARNS
Sbjct: 121 VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPGFDIVGSLERAARNS 180

Query: 181 PSFSRLEADILERIVNQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIENV 240
           PSFS++EAD L+ IV QGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVS LNEV+VSI++V
Sbjct: 181 PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV 240

Query: 241 AMEVHANVSTCKKRYRELLEALVKVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS 300
           AMEVHA VSTCKKRYRELL ALV+VGKKLPWGKDIT +NIVKNAPFVIQYMELKSMSN  
Sbjct: 241 AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC 300

Query: 301 GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQRSRWCNESNRDNGNRL 360
           G+GK+ E+VGIDLQ+AVSECLRKEL+YESEVNNLEDDSQYFEL  + W +ES+ D+ N+L
Sbjct: 301 GQGKNFEDVGIDLQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL 360

Query: 361 NISHECLSLIYNKFLDEMAELRSLGGINEVYGRKQGRKAGFYPSTEWWEGKSELSKKLLL 420
           NISHECLSLIY KFLDEMA LRS GGINE+YGRK GRKAGF  STEWWEGKS+LSKKLLL
Sbjct: 361 NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL 420

Query: 421 QQLLETDIGSQGIPPPSFVSNCNAYERRKEKVNAAKKRIQRIMHPSNAPADDVNIKKKRK 480
            QLLETDIG  G+PP SFV++CNAY+RRKEK+NAAK RIQRIM PS+A   DVN +K+RK
Sbjct: 421 HQLLETDIGLNGMPP-SFVTSCNAYKRRKEKINAAKNRIQRIMLPSHAAIGDVNAEKERK 480

Query: 481 RKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLYVFTS 523
           RK A  IEWEDIIIETLLLH V+EEEIEKGHY  LLDL+VF+S
Sbjct: 481 RKRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSS 522

[Close]
BLAST of Chy12G207000 vs. TAIR 10
Match: AT4G35540.1 (zinc ion binding;transcription regulators )

HSP 1 Score: 459.5 bits (1181), Expect = 3.6e-129
Identity = 247/534 (46.25%), Postives = 353/534 (66.10%), Query Frame = 0 

Query: 5   CKNCHSRSIFRDDVSGNQICSSCGIVQEFDNYEAQLGGINGPQGTFVRVGTSGSGSVLNY 64
           CK C+  +  RD+ +GN  C  CG ++E+DNYEAQLGGI GPQGT++RVGT G GSVL+Y
Sbjct: 3   CKRCNGSNFERDEDTGNSYCGGCGTLREYDNYEAQLGGIRGPQGTYIRVGTIGRGSVLDY 62

Query: 65  KDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAYVSMR 124
           KDKKIYEA  +IE+ T RL    +K+  ++ ++S +T+GE+G G+WFPIL+GAC Y  +R
Sbjct: 63  KDKKIYEANNLIEETTERLNL-GNKTEVIKSMISKLTDGEFGQGEWFPILIGACCYAVVR 122

Query: 125 KDSR-PLSMSEVASAVECDLHELGRMVMRVVEFLDLRGSEFPVFDIVGSLERAARNSPSF 184
           ++ +  LSM EVA  V CDLH+LG M+ RVV+ LDL   E   FD+VG   +   NSP  
Sbjct: 123 EEGKGVLSMEEVAYEVGCDLHQLGPMIKRVVDHLDL---ELREFDLVGLFTKTVTNSPRL 182

Query: 185 SRLEADILERIVNQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSIENVAME 244
           + ++ D  E+I+ QG FL+ CA+KWFL+TGR+P+P+V AVL  V ++N V V I+++A +
Sbjct: 183 TDVDRDKKEKIIKQGTFLMNCALKWFLSTGRRPMPLVVAVLAFVVQVNGVKVKIDDLAKD 242

Query: 245 VHANVSTCKKRYRELLEALVKVGKK--LPWGKDITTKNIVKNAPFVIQYMELKSM-SNAS 304
              +++TCK RY+EL E LVKV ++  LPW KD+T KN++K++  +   ME KSM     
Sbjct: 243 ASVSLTTCKTRYKELSEKLVKVAEEVGLPWAKDVTVKNVLKHSGTLFALMEAKSMKKRKQ 302

Query: 305 GKGKDLENV-GIDLQSAVSECLRKELEYESEVNNLEDD-SQYFELQRSRWCNESNRDNGN 364
           G GK+L    G  ++  V +CL KE  Y  + +  +D  S+YF+++  R  +  N D+  
Sbjct: 303 GTGKELVRTDGFCVEDLVMDCLSKESMYCYDDDARQDTMSRYFDVEGERQLSLCNYDD-- 362

Query: 365 RLNISHECLSLIYNKFLDEMA----ELRSLGGINEVYGRKQGRKAGFYPSTEWWEGKSEL 424
             NIS   LS  YN+F D +       RS G    ++ R+     G   +  WW+GKSEL
Sbjct: 363 --NISENQLSTKYNEFEDRVCGGTLAKRSQGSSQSMWQRRS--VFGMVSTENWWKGKSEL 422

Query: 425 SKKLLLQQLLETDIGSQGIPPPSFVSNCNAYERRKEKVNAAKKRIQRIMHPSNAPAD--- 484
           SK+LLL+ LLE D+G + + PPS++  C A ERR+EK+ AAK RI  I HPS+  ++   
Sbjct: 423 SKRLLLKDLLEKDVGLEAL-PPSYIKGCVAVERRREKIKAAKLRINAIQHPSDNVSEGAL 482

Query: 485 --DVNIKKKRKRKGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLYVFTS 524
             ++   KK+++KG++ I+WED++I+TL+LH V EEEIEKGHYK LLDL+VF S
Sbjct: 483 SLELEHSKKKRKKGSE-IDWEDLVIQTLVLHNVNEEEIEKGHYKTLLDLHVFNS 524

The following BLAST results are available for this feature:
BLAST of Chy12G207000 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O817875.0e-12846.25Plant-specific TFIIB-related protein PTF2 OS=Arabidopsis thaliana OX=3702 GN=PTF... [more]
A8KBY26.8e-0826.90Transcription factor IIIB 50 kDa subunit OS=Danio rerio OX=7955 GN=brf2 PE=2 SV=... [more]
Q4R3181.2e-0725.00Transcription factor IIIB 50 kDa subunit OS=Macaca fascicularis OX=9541 GN=BRF2 ... [more]
Q9HAW02.0e-0724.74Transcription factor IIIB 50 kDa subunit OS=Homo sapiens OX=9606 GN=BRF2 PE=1 SV... [more]
Q4V8D64.4e-0724.08Transcription factor IIIB 50 kDa subunit OS=Rattus norvegicus OX=10116 GN=Brf2 P... [more]
BLAST of Chy12G207000 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M0A03.4e-28996.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G477510 PE=4 SV=1[more]
A0A5A7UMA01.6e-28695.63Transcription factor IIIB 50 kDa subunit OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3B6X41.6e-28695.63transcription factor IIIB 50 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103486826... [more]
A0A6J1JZD62.3e-24582.60plant-specific TFIIB-related protein PTF2 OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
A0A6J1GSR82.3e-24582.41plant-specific TFIIB-related protein PTF2 OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
BLAST of Chy12G207000 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004149065.10.096.96plant-specific TFIIB-related protein PTF2 [Cucumis sativus] >KGN65641.1 hypothet... [more]
XP_008443157.10.095.63PREDICTED: transcription factor IIIB 50 kDa subunit [Cucumis melo] >KAA0057033.1... [more]
XP_038893651.10.090.98plant-specific TFIIB-related protein PTF2 [Benincasa hispida][more]
XP_023542889.12.90e-31082.98plant-specific TFIIB-related protein PTF2 [Cucurbita pepo subsp. pepo][more]
KAG6573303.15.85e-31082.98Plant-specific TFIIB-related protein PTF2, partial [Cucurbita argyrosperma subsp... [more]
BLAST of Chy12G207000 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G35540.13.6e-12946.25zinc ion binding;transcription regulators [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 317..337
NoneNo IPR availableCOILSCoilCoilcoord: 442..462
NoneNo IPR availableGENE3D2.20.25.10coord: 2..37
e-value: 2.2E-5
score: 25.6
NoneNo IPR availableGENE3D1.10.472.10coord: 62..162
e-value: 2.5E-8
score: 35.8
NoneNo IPR availableGENE3D1.10.472.10coord: 183..265
e-value: 2.3E-8
score: 36.2
NoneNo IPR availablePANTHERPTHR11618:SF13TRANSCRIPTION INITIATION FACTOR IIBcoord: 3..297
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 4..34
IPR000812Transcription factor TFIIBPRINTSPR00685TIFACTORIIBcoord: 246..260
score: 29.33
coord: 142..157
score: 25.83
coord: 214..230
score: 32.55
coord: 17..37
score: 28.89
IPR000812Transcription factor TFIIBPANTHERPTHR11618TRANSCRIPTION INITIATION FACTOR IIB-RELATEDcoord: 3..297
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 193..262
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 72..159

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy12G207000.1Chy12G207000.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0070897 transcription preinitiation complex assembly
biological_process GO:0006352 DNA-templated transcription, initiation
cellular_component GO:0005634 nucleus
cellular_component GO:0097550 transcription preinitiation complex
molecular_function GO:0017025 TBP-class protein binding