Chy12G206360 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G206360
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Girdin-like
Location	chrH12: 288322 .. 289590 (+)
RNA-Seq Expression	Chy12G206360
Synteny	Chy12G206360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAACATATCCAAAGAAGGAGACTTGAGTGTCTTTCTTTTCAAAAATGAGTTCTGAAAATGTCATATGGAAGGCTCAATGGATGCCTTTGAATGCAGTGATTCATAGATGTGGAGATTTTCATAGTGTGCCTTTGTTGGGACCATGGGAAGGTGTTAACTATACACCATTATTAGTTTTGTGTCAGGTGTGGCTCAAACAGTTTATACCACCAACTCATAATCTATAAGACTTTGAATTTTTATACGATCTTGAAGACTGTCAAGGAAAAAAACGTCGAGTAGTATGTGCATGGAAGTCTGTGAGGAAGATAAAAGACAAAGGACACTATGAAGGAGTTATCAGTGGATACGAGACATATGTAATAGATACTTTAAGGGAGGCAAATAGAAGGAAGAATGTAATAGATACCTTAAGGGAGGTAGTTGAAAGGGTAGAAGAGACAAGCTTTGAACAATCAAACCAGTGGGTTGAGAAGAGCATTAAATTAGAAGAGAAAAATTGATTGTTAGAGCAAGAGAATGAAAAACTTCGTAAGGAGACAAGCCAATGGATCGATCATGCGACTTTTTTTTGCAAAAAGAGCTCGAAAAGACCAAGAGTTTTTTAAGAAATCAAGATAAGCTAGAAAAGAATCTTTAGGTGTTAGATAAAGAGATGAGGCGAATGAATAAAGCAAATTGAAACTTGAAAAATGAAAAGACAACATTACAGATAACAGTAGAATTGCAAGATGAATATATTAAAGATTTAGAAAGTGGGAAGGAATATTTTCTTGAGCTTGTCAATGATATGAATACATCAATTAGAAAACGGGAAGCACATATAGTAGATTTGGAAGCACACAATCATTCTCTACGTCAAACTGTTGATAGCCTACATGTGAAGATGGTCGAGCACTCTGAAGAGTATAAGATACTGAAAAATTATGCTGATTCCTTACACTATTAACTTACTGCATTTCAAAATTCAAGTGAGAGGATAGTGCAAGAATACGAGTTATTGAAGACAGATTACATGCAAATGAAGGTTGATTATGATTTGCAAATGAAGGATTTCCAAGAGTTAGTTGAACGTGTATATCAGACGATTGGATTTCTCAGAATAATGTCTAGAAGAGAAAATGGTTTTGCAGAATGGACAACTGATTTAAGGATTAGTTTTTTCTCAATACAACCTCATGGAGATGATCTGGATAGATTCTTAAAGATTATATGCAGAGAACTTGGGCATTTTGGTCGTTTTCATTAGTTGTTTATTTTGCTATTAA

mRNA sequence

CCAACATATCCAAAGAAGGAGACTTGAGTGTCTTTCTTTTCAAAAATGAGTTCTGAAAATGTCATATGGAAGGCTCAATGGATGCCTTTGAATGCAGTGATTCATAGATGTGGAGATTTTCATAGTGTGCCTTTGTTGGGACCATGGGAAGGTGTTAACTATACACCATTATTAGTTTTGTGTCAGGTGTGGCTCAAACAGTTTATACCACCAACTCATAATCTATAAGACTTTGAATTTTTATACGATCTTGAAGACTGTCAAGGAAAAAAACGTCGAGTAGTATGTGCATGGAAGTCTGTGAGGAAGATAAAAGACAAAGGACACTATGAAGGAGTTATCAGTGGATACGAGACATATGTAATAGATACTTTAAGGGAGGCAAATAGAAGGAAGAATGTAATAGATACCTTAAGGGAGGTAGTTGAAAGGGTAGAAGAGACAAGCTTTGAACAATCAAACCAGTGGGTTGAGAAGAGCATTAAATTAGAAGAGAAAAATTGATTGTTAGAGCAAGAGAATGAAAAACTTCGTAAGGAGACAAGCCAATGGATCGATCATGCGACTTTTTTTTGCAAAAAGAGCTCGAAAAGACCAAGAGTTTTTTAAGAAATCAAGATAAGCTAGAAAAGAATCTTTAGGTGTTAGATAAAGAGATGAGGCGAATGAATAAAGCAAATTGAAACTTGAAAAATGAAAAGACAACATTACAGATAACAGTAGAATTGCAAGATGAATATATTAAAGATTTAGAAAGTGGGAAGGAATATTTTCTTGAGCTTGTCAATGATATGAATACATCAATTAGAAAACGGGAAGCACATATAGTAGATTTGGAAGCACACAATCATTCTCTACGTCAAACTGTTGATAGCCTACATGTGAAGATGGTCGAGCACTCTGAAGAGTATAAGATACTGAAAAATTATGCTGATTCCTTACACTATTAACTTACTGCATTTCAAAATTCAAGTGAGAGGATAGTGCAAGAATACGAGTTATTGAAGACAGATTACATGCAAATGAAGGTTGATTATGATTTGCAAATGAAGGATTTCCAAGAGTTAGTTGAACGTGTATATCAGACGATTGGATTTCTCAGAATAATGTCTAGAAGAGAAAATGGTTTTGCAGAATGGACAACTGATTTAAGGATTAGTTTTTTCTCAATACAACCTCATGGAGATGATCTGGATAGATTCTTAAAGATTATATGCAGAGAACTTGGGCATTTTGGTCGTTTTCATTAGTTGTTTATTTTGCTATTAA

Coding sequence (CDS)

CCAACATATCCAAAGAAGGAGACTTGAGTGTCTTTCTTTTCAAAAATGAGTTCTGAAAATGTCATATGGAAGGCTCAATGGATGCCTTTGAATGCAGTGATTCATAGATGTGGAGATTTTCATAGTGTGCCTTTGTTGGGACCATGGGAAGGTGTTAACTATACACCATTATTAGTTTTGTGTCAGGTGTGGCTCAAACAGTTTATACCACCAACTCATAATCTATAAGACTTTGAATTTTTATACGATCTTGAAGACTGTCAAGGAAAAAAACGTCGAGTAGTATGTGCATGGAAGTCTGTGAGGAAGATAAAAGACAAAGGACACTATGAAGGAGTTATCAGTGGATACGAGACATATGTAATAGATACTTTAAGGGAGGCAAATAGAAGGAAGAATGTAATAGATACCTTAAGGGAGGTAGTTGAAAGGGTAGAAGAGACAAGCTTTGAACAATCAAACCAGTGGGTTGAGAAGAGCATTAAATTAGAAGAGAAAAATTGATTGTTAGAGCAAGAGAATGAAAAACTTCGTAAGGAGACAAGCCAATGGATCGATCATGCGACTTTTTTTTGCAAAAAGAGCTCGAAAAGACCAAGAGTTTTTTAAGAAATCAAGATAAGCTAGAAAAGAATCTTTAGGTGTTAGATAAAGAGATGAGGCGAATGAATAAAGCAAATTGAAACTTGAAAAATGAAAAGACAACATTACAGATAACAGTAGAATTGCAAGATGAATATATTAAAGATTTAGAAAGTGGGAAGGAATATTTTCTTGAGCTTGTCAATGATATGAATACATCAATTAGAAAACGGGAAGCACATATAGTAGATTTGGAAGCACACAATCATTCTCTACGTCAAACTGTTGATAGCCTACATGTGAAGATGGTCGAGCACTCTGAAGAGTATAAGATACTGAAAAATTATGCTGATTCCTTACACTATTAACTTACTGCATTTCAAAATTCAAGTGAGAGGATAGTGCAAGAATACGAGTTATTGAAGACAGATTACATGCAAATGAAGGTTGATTATGATTTGCAAATGAAGGATTTCCAAGAGTTAGTTGAACGTGTATATCAGACGATTGGATTTCTCAGAATAATGTCTAGAAGAGAAAATGGTTTTGCAGAATGGACAACTGATTTAAGGATTAGTTTTTTCTCAATACAACCTCATGGAGATGATCTGGATAGATTCTTAAAGATTATATGCAGAGAACTTGGGCATTTTGGTCGTTTTCATTAGTTGTTTATTTTGCTATTAA

Protein sequence

PTYPKKET*VSFFSKMSSENVIWKAQWMPLNAVIHRCGDFHSVPLLGPWEGVNYTPLLVLCQVWLKQFIPPTHNL*DFEFLYDLEDCQGKKRRVVCAWKSVRKIKDKGHYEGVISGYETYVIDTLREANRRKNVIDTLREVVERVEETSFEQSNQWVEKSIKLEEKN*LLEQENEKLRKETSQWIDHATFFCKKSSKRPRVF*EIKIS*KRIFRC*IKR*GE*IKQIET*KMKRQHYR*Q*NCKMNILKI*KVGRNIFLSLSMI*IHQLENGKHI**IWKHTIILYVKLLIAYM*RWSSTLKSIRY*KIMLIPYTINLLHFKIQVRG*CKNTSY*RQITCK*RLIMICK*RISKS*LNVYIRRLDFSE*CLEEKMVLQNGQLI*GLVFSQYNLMEMIWIDS*RLYAENLGILVVFISCLFCY*

Homology

[Close]

BLAST of Chy12G206360 vs. ExPASy TrEMBL
Match: A0A5A7T5S7 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 4.5e-82
Identity = 149/197 (75.63%), Postives = 168/197 (85.28%), Query Frame = 0


Query: 1   PTYPKKET*VSFFSKMSSENVIWKAQWMPLNAVIHRCGDFHSVPLLGPWEGVNYTPLLVL 60
           PTYP+KE  +SFF+K++SENVIWKAQWMPL AVI+RCGDFHSVPLLGPW GVNYTPLLVL
Sbjct: 271 PTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVL 330

Query: 61  CQVWLKQFIPPTHNL*DFEFLYDLEDCQGKKRRVVCAWKSVRKIKDKGHYEGVISGYETY 120
            QVWLKQFIPPTHNL + +F YD EDCQGKKR+ VCAWKS+RKIKDKGHYEGV SGYE +
Sbjct: 331 RQVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAW 390

Query: 121 VIDTLREANRRKNVIDTLREVVERVEETSFEQSNQWVEKSIKLEEKN*LLEQENEKLRKE 180
                 +ANRRKN+ID  REVVE  +ETSFEQ NQW+EKSI+LEEKN LLEQENEKLRKE
Sbjct: 391 ------QANRRKNIIDISREVVESGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKE 450

Query: 181 TSQWIDHATFFCKKSSK 198
           TSQW+DHAT+   +  K
Sbjct: 451 TSQWMDHATYLQNELEK 461

[Close]

BLAST of Chy12G206360 vs. ExPASy TrEMBL
Match: A0A5D3CZ50 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003770 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 5.9e-82
Identity = 149/196 (76.02%), Postives = 168/196 (85.71%), Query Frame = 0


Query: 2   TYPKKET*VSFFSKMSSENVIWKAQWMPLNAVIHRCGDFHSVPLLGPWEGVNYTPLLVLC 61
           TYP+KE  +SFF+K++SENVIWKAQWMPL AVI+RCGDFHSVPLLGPW GVNYTPLLVL 
Sbjct: 7   TYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLR 66

Query: 62  QVWLKQFIPPTHNL*DFEFLYDLEDCQGKKRRVVCAWKSVRKIKDKGHYEGVISGYETYV 121
           QVWLKQFIPPTHNL + +F YD EDCQGKKR+ VCAWKS+RKIKDKGHYEGV SGYE + 
Sbjct: 67  QVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAW- 126

Query: 122 IDTLREANRRKNVIDTLREVVERVEETSFEQSNQWVEKSIKLEEKN*LLEQENEKLRKET 181
                +ANRRKN+ID  REVVER +ETSFEQ NQW+EKSI+LEEKN LLEQENEKLRKET
Sbjct: 127 -----QANRRKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKET 186

Query: 182 SQWIDHATFFCKKSSK 198
           SQW+DHAT+   +  K
Sbjct: 187 SQWMDHATYLQNELEK 196

[Close]

BLAST of Chy12G206360 vs. ExPASy TrEMBL
Match: A0A5A7TNJ1 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002070 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 5.9e-82
Identity = 149/196 (76.02%), Postives = 168/196 (85.71%), Query Frame = 0


Query: 2   TYPKKET*VSFFSKMSSENVIWKAQWMPLNAVIHRCGDFHSVPLLGPWEGVNYTPLLVLC 61
           TYP+KE  +SFF+K++SENVIWKAQWMPL AVI+RCGDFHSVPLLGPW GVNYTPLLVL 
Sbjct: 116 TYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLR 175

Query: 62  QVWLKQFIPPTHNL*DFEFLYDLEDCQGKKRRVVCAWKSVRKIKDKGHYEGVISGYETYV 121
           QVWLKQFIPPTHNL + +F YD EDCQGKKR+ VCAWKS+RKIKDKGHYEGV SGYE + 
Sbjct: 176 QVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAW- 235

Query: 122 IDTLREANRRKNVIDTLREVVERVEETSFEQSNQWVEKSIKLEEKN*LLEQENEKLRKET 181
                +ANRRKN+ID  REVVER +ETSFEQ NQW+EKSI+LEEKN LLEQENEKLRKET
Sbjct: 236 -----QANRRKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKET 295

Query: 182 SQWIDHATFFCKKSSK 198
           SQW+DHAT+   +  K
Sbjct: 296 SQWMDHATYLQNELEK 305

[Close]

BLAST of Chy12G206360 vs. ExPASy TrEMBL
Match: A0A5D3DK34 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00110 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 1.5e-80
Identity = 146/196 (74.49%), Postives = 167/196 (85.20%), Query Frame = 0


Query: 2   TYPKKET*VSFFSKMSSENVIWKAQWMPLNAVIHRCGDFHSVPLLGPWEGVNYTPLLVLC 61
           +YP+KE  +SFF+K++SENVIWKAQWMPL AVI+RCGDFHSVPLLGPW GVNY PLLVL 
Sbjct: 49  SYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYLPLLVLR 108

Query: 62  QVWLKQFIPPTHNL*DFEFLYDLEDCQGKKRRVVCAWKSVRKIKDKGHYEGVISGYETYV 121
           QVWLKQFIPPTHNL + +F YDLEDCQGKKR+ VCAWKS+RKIKDKGHYEGV SGYE + 
Sbjct: 109 QVWLKQFIPPTHNLQESDFSYDLEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAW- 168

Query: 122 IDTLREANRRKNVIDTLREVVERVEETSFEQSNQWVEKSIKLEEKN*LLEQENEKLRKET 181
                +ANRRKN+ID  REVVER +ETSFEQ NQW++KSI+LEEKN LLEQENEKLRKET
Sbjct: 169 -----QANRRKNIIDISREVVERGKETSFEQPNQWIKKSIELEEKNRLLEQENEKLRKET 228

Query: 182 SQWIDHATFFCKKSSK 198
           SQW+DHA +   +  K
Sbjct: 229 SQWMDHAAYLQNELEK 238

[Close]

BLAST of Chy12G206360 vs. ExPASy TrEMBL
Match: A0A5A7UL51 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001430 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.2e-77
Identity = 143/197 (72.59%), Postives = 164/197 (83.25%), Query Frame = 0


Query: 1   PTYPKKET*VSFFSKMSSENVIWKAQWMPLNAVIHRCGDFHSVPLLGPWEGVNYTPLLVL 60
           PTYP+KE  +SFF+K++SENVIWKAQWMPL A I+RC DFHSVPLLGPW GVNYTPLLVL
Sbjct: 292 PTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAAIYRCEDFHSVPLLGPWGGVNYTPLLVL 351

Query: 61  CQVWLKQFIPPTHNL*DFEFLYDLEDCQGKKRRVVCAWKSVRKIKDKGHYEGVISGYETY 120
            QVWLKQFIPPT NL + +F Y+ EDCQGKKR+ VCAWKS+RKIKDKGH EGV SGYE +
Sbjct: 352 RQVWLKQFIPPTQNLQESDFSYNPEDCQGKKRQAVCAWKSIRKIKDKGHCEGVTSGYEAW 411

Query: 121 VIDTLREANRRKNVIDTLREVVERVEETSFEQSNQWVEKSIKLEEKN*LLEQENEKLRKE 180
                 +AN+RKN+ID  REVVER +ETSF Q NQW+EKSI+LEEKN LLEQENEKLRKE
Sbjct: 412 ------KANKRKNIIDISREVVERGKETSFAQPNQWIEKSIELEEKNRLLEQENEKLRKE 471

Query: 181 TSQWIDHATFFCKKSSK 198
           TSQW+DHAT+   +  K
Sbjct: 472 TSQWMDHATYLQNELEK 482

[Close]

BLAST of Chy12G206360 vs. NCBI nr
Match: TYK16558.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 311 bits (798), Expect = 1.98e-101
Identity = 148/189 (78.31%), Postives = 166/189 (87.83%), Query Frame = 0


Query: 2   TYPKKET*VSFFSKMSSENVIWKAQWMPLNAVIHRCGDFHSVPLLGPWEGVNYTPLLVLC 61
           TYP+KE  +SFF+K++SENVIWKAQWMPL AVI+RCGDFHSVPLLGPW GVNYTPLLVL 
Sbjct: 7   TYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLR 66

Query: 62  QVWLKQFIPPTHNL*DFEFLYDLEDCQGKKRRVVCAWKSVRKIKDKGHYEGVISGYETYV 121
           QVWLKQFIPPTHNL + +F YD EDCQGKKR+ VCAWKS+RKIKDKGHYEGV SGYE + 
Sbjct: 67  QVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAW- 126

Query: 122 IDTLREANRRKNVIDTLREVVERVEETSFEQSNQWVEKSIKLEEKN*LLEQENEKLRKET 181
                +ANRRKN+ID  REVVER +ETSFEQ NQW+EKSI+LEEKN LLEQENEKLRKET
Sbjct: 127 -----QANRRKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKET 186

Query: 182 SQWIDHATF 190
           SQW+DHAT+
Sbjct: 187 SQWMDHATY 189

[Close]

BLAST of Chy12G206360 vs. NCBI nr
Match: XP_031739496.1 (uncharacterized protein LOC116403043 [Cucumis sativus])

HSP 1 Score: 313 bits (801), Expect = 1.82e-100
Identity = 155/197 (78.68%), Postives = 166/197 (84.26%), Query Frame = 0


Query: 1   PTYPKKET*VSFFSKMSSENVIWKAQWMPLNAVIHRCGDFHSVPLLGPWEGVNYTPLLVL 60
           PTYPKKET VSFFS +SSE+VIWKAQWMPL AVI+RCGDFHSVPLLGPW GVNYTPLLVL
Sbjct: 121 PTYPKKETWVSFFSTLSSEDVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVL 180

Query: 61  CQVWLKQFIPPTHNL*DFEFLYDLEDCQGKKRRVVCAWKSVRKIKDKGHYEGVISGYETY 120
            QVWLKQFIPPTHNL D +F YD EDCQ KK R VCAWKSVRKIKDKGHYEGV SGYE +
Sbjct: 181 RQVWLKQFIPPTHNLQDSDFAYDHEDCQRKKHRAVCAWKSVRKIKDKGHYEGVTSGYEAW 240

Query: 121 VIDTLREANRRKNVIDTLREVVERVEETSFEQSNQWVEKSIKLEEKN*LLEQENEKLRKE 180
                 + NRRKNVI TL++VVERVEETS EQ +QWVEK  KLEEKN LLEQENEKL+KE
Sbjct: 241 ------QTNRRKNVIYTLKDVVERVEETSSEQPDQWVEKITKLEEKNRLLEQENEKLQKE 300

Query: 181 TSQWIDHATFFCKKSSK 197
           TSQWIDHATF  K+  K
Sbjct: 301 TSQWIDHATFLQKELEK 311

[Close]

BLAST of Chy12G206360 vs. NCBI nr
Match: XP_031740432.1 (uncharacterized protein LOC116403430 [Cucumis sativus])

HSP 1 Score: 313 bits (801), Expect = 4.51e-100
Identity = 156/197 (79.19%), Postives = 165/197 (83.76%), Query Frame = 0


Query: 1   PTYPKKET*VSFFSKMSSENVIWKAQWMPLNAVIHRCGDFHSVPLLGPWEGVNYTPLLVL 60
           PTYPKKET VSFFS +SSE+VIWKAQWMPL AVI+RCGDFHSVPLLGPW GVNYTPLLVL
Sbjct: 120 PTYPKKETWVSFFSTLSSEDVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVL 179

Query: 61  CQVWLKQFIPPTHNL*DFEFLYDLEDCQGKKRRVVCAWKSVRKIKDKGHYEGVISGYETY 120
            QVWLKQFIPPTHNL D +F YD EDCQ KK R VCAWKSVRKIKDKGHYEGV SGYE +
Sbjct: 180 RQVWLKQFIPPTHNLQDSDFAYDHEDCQRKKHRAVCAWKSVRKIKDKGHYEGVTSGYEAW 239

Query: 121 VIDTLREANRRKNVIDTLREVVERVEETSFEQSNQWVEKSIKLEEKN*LLEQENEKLRKE 180
                 + NRRKNVI TLREVVERVEE S EQ +QWVEK  KLEEKN LLEQENEKL+KE
Sbjct: 240 ------QTNRRKNVIYTLREVVERVEEPSSEQPDQWVEKITKLEEKNRLLEQENEKLQKE 299

Query: 181 TSQWIDHATFFCKKSSK 197
           TSQWIDHATF  K+  K
Sbjct: 300 TSQWIDHATFLQKELEK 310

[Close]

BLAST of Chy12G206360 vs. NCBI nr
Match: KAA0044912.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 311 bits (798), Expect = 7.62e-100
Identity = 148/189 (78.31%), Postives = 166/189 (87.83%), Query Frame = 0


Query: 2   TYPKKET*VSFFSKMSSENVIWKAQWMPLNAVIHRCGDFHSVPLLGPWEGVNYTPLLVLC 61
           TYP+KE  +SFF+K++SENVIWKAQWMPL AVI+RCGDFHSVPLLGPW GVNYTPLLVL 
Sbjct: 116 TYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLR 175

Query: 62  QVWLKQFIPPTHNL*DFEFLYDLEDCQGKKRRVVCAWKSVRKIKDKGHYEGVISGYETYV 121
           QVWLKQFIPPTHNL + +F YD EDCQGKKR+ VCAWKS+RKIKDKGHYEGV SGYE + 
Sbjct: 176 QVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAW- 235

Query: 122 IDTLREANRRKNVIDTLREVVERVEETSFEQSNQWVEKSIKLEEKN*LLEQENEKLRKET 181
                +ANRRKN+ID  REVVER +ETSFEQ NQW+EKSI+LEEKN LLEQENEKLRKET
Sbjct: 236 -----QANRRKNIIDISREVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKET 295

Query: 182 SQWIDHATF 190
           SQW+DHAT+
Sbjct: 296 SQWMDHATY 298

[Close]

BLAST of Chy12G206360 vs. NCBI nr
Match: TYK23955.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 307 bits (786), Expect = 1.36e-96
Identity = 145/189 (76.72%), Postives = 165/189 (87.30%), Query Frame = 0


Query: 2   TYPKKET*VSFFSKMSSENVIWKAQWMPLNAVIHRCGDFHSVPLLGPWEGVNYTPLLVLC 61
           +YP+KE  +SFF+K++SENVIWKAQWMPL AVI+RCGDFHSVPLLGPW GVNY PLLVL 
Sbjct: 49  SYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYLPLLVLR 108

Query: 62  QVWLKQFIPPTHNL*DFEFLYDLEDCQGKKRRVVCAWKSVRKIKDKGHYEGVISGYETYV 121
           QVWLKQFIPPTHNL + +F YDLEDCQGKKR+ VCAWKS+RKIKDKGHYEGV SGYE + 
Sbjct: 109 QVWLKQFIPPTHNLQESDFSYDLEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAW- 168

Query: 122 IDTLREANRRKNVIDTLREVVERVEETSFEQSNQWVEKSIKLEEKN*LLEQENEKLRKET 181
                +ANRRKN+ID  REVVER +ETSFEQ NQW++KSI+LEEKN LLEQENEKLRKET
Sbjct: 169 -----QANRRKNIIDISREVVERGKETSFEQPNQWIKKSIELEEKNRLLEQENEKLRKET 228

Query: 182 SQWIDHATF 190
           SQW+DHA +
Sbjct: 229 SQWMDHAAY 231

The following BLAST results are available for this feature:

BLAST of Chy12G206360 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G206360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T5S7	4.5e-82	75.63	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=...	[more]
A0A5D3CZ50	5.9e-82	76.02	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003770 PE...	[more]
A0A5A7TNJ1	5.9e-82	76.02	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002070 PE...	[more]
A0A5D3DK34	1.5e-80	74.49	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00110 PE...	[more]
A0A5A7UL51	1.2e-77	72.59	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001430 P...	[more]

BLAST of Chy12G206360 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK16558.1	1.98e-101	78.31	girdin-like [Cucumis melo var. makuwa]	[more]
XP_031739496.1	1.82e-100	78.68	uncharacterized protein LOC116403043 [Cucumis sativus]	[more]
XP_031740432.1	4.51e-100	79.19	uncharacterized protein LOC116403430 [Cucumis sativus]	[more]
KAA0044912.1	7.62e-100	78.31	girdin-like [Cucumis melo var. makuwa]	[more]
TYK23955.1	1.36e-96	76.72	girdin-like [Cucumis melo var. makuwa]	[more]

BLAST of Chy12G206360 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 157..180
None	No IPR available	PANTHER	PTHR48200	PROTEIN, PUTATIVE-RELATED	coord: 14..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G206360.1	Chy12G206360.1	mRNA