Chy12G206080 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G206080
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Coatomer subunit zeta
Location	chrH12: 93602 .. 95953 (+)
RNA-Seq Expression	Chy12G206080
Synteny	Chy12G206080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGAATCTTGCCCTGCCATTAAAAGCATTCTTCTTTTGGATTCCGAAGGGAAGCGTGTAGCTGTCAAGTATTATTCTGATGACTGGCCTACAAATAGTGCAAAGGAAGCTTTTGAGAAAGCCGTTTTCATCAAAACTCAGAAGACAAATGCTCGAACAGAGGGTAGATACCTTTTCATATATTGGGTTTTAACTGTTTTTTGTGAAAGTGTGCATCCTTAATCGTGTTAACTTCTCCTACTTAAGTCAATTTCAATGTCCTTTTAGTCACTGTTAAGAAATTTCTGAATCTTTCAGTAGTCAAATTATTAGTTGGTTTATTCATGATCGTTGTCCTTTGCCATGAGACTAAGAATTATTTTTTCAATCTCATTCTCGTGGCTCTCAGTAGCTGGGTTAGTCATTATCTATTTTGATCTCTGCATTCTTCTATTGGACCATCTCCCAGCCTAACACCATTTTGTTGAATTCAACACTTTGTTTCTTTATGCCTTTCAAGGTCGGTGAGTTTCTTTTCTACGTTCTAACATTCAATTCACTTTAACAGCGGAGATAGCAATGTTTGAGAGCAATATAGTGGTTTACAAGTTTGCTCAGGACCTTCATTTTTTTGTCACGGGTGGAGAAGATGAAAATGAGCTCATTTTAGCATCCGTTCTTCAGGGGTTTTTTGATGCTGTGGGCATTCTTCTTAGGTCTTGATACTATTTATATATTAATTTTGGGTCCTTATGCACTGGCTCGATATTAGTGTTCTCGATCATAGTATCGTTAGATATTTATTTTTGTTTCTTGTACCCCAGGGGTAATGTAGAAAAGAAGGAGGCACTTGAGAACTTGGACCTCATTTTACTGTGTCTTGATGAAATTATCGACGGAGGGTATATCTCATATGCTCTTTCCTTATTACCCATTCTCTGCATTTCAATTGTGTGACTTGTTTTTCCATTTCCTTCTATTGATAATTGATCTCTGTATCTTGATTGTGCCACTCTTTTTACTTACCCTCTCTAAGTTGATGACTGTGTCCATTCTTGCTAGACAAATTGTGAACATGAAAATTGAAGTATGAGTTGTGGATGATTATATATCAAGAATCCAAGGTTGTAGTAATGTCATTACTCGTCAGGAAAGTAGTTGTAGTTTCATGAATTTATGTGGAAAATAAGTTGTTGACTAATGAGTAATATGCTTTCATTGTAGTTGCATAATTCCTATAGAATAGTCTAAGTTATTCTCTCCTGTTCAAGTACTGGCTATTTTGTAGTTTGTGGTTTGTTGCTCGATAACGGATTTGGTTGTTCCACATCTTCATTTCGATATGTCACTATTGTTTATATAAATTGATGGACACACGACATCCGATTATGTTGAAAGTGGAGACGACATTATGTAACGTGAGGCATAGATTTGAAGAAGCTAGAACCGTAGAGCATTGATATAATCTGTTTTTGATGGAAAGACTACAAACCATTTAAATTCGATTGATTTATTTTCTCCCAAGATTGTTCAGAAATAAATTTCTTTTCATCTGAATATTCAAGGTTTGATGTTTTCATTGCCTCGCGTGTGGGATTATTGTCATTGTGCTTTTCTGAAATTGCAATTTAACAGTTCTTAACCTTTTCATAAACCATCTTGGCATCCCATACCTTTAGCTATTTAACTGTTTGTGTATTTTTCAGCATTGTTCTCGAGACGGATGCAAATGTCATAGCAGGGAAGGTCGCAAGTCACAGTATTGACAGTAATGCTCCTTTGTCTGAGCAGGTACAGTACAATATTTCAGATTCTTATAGCTTGTTTTGTTTGGTTGGCAATATGAATTATGTTTGTTGTCGGTTCACTGCCATCTAAATTCTGAACATAACATCGTCCAATGCACCTAAATTTTGAATTTTAAAATGCAAAATTATATTTTAAAAAAATGATTAGGAATATAGTATTTCACGTTATAAACTCAGTTCAATCTTTTAACTTAATATGTCTTATAACATGTATAAATTATATAATATTACAAAATAATAGTTTATATTGGTTAATTTTATGGTTTAAATACATATATGTATATATTATCAAACACATTAAAAACAATTGTTTAAATTAGAATCTAATTTTTGAACCTATGACCAAAAACATATTGGAAAACGTATGACGTACAATTATGAACCCTATTTTTATTGAATCTCCTAATTCTGATTTTTTGTTTTATGAAGCATGCCTTTTATCTTTTTACTTATCCCTTTCGTTTTTCCAGTATTTTGAAAGATGTTTTTATCTCTCTTGCAGACAATAAGTCAAGCATTGGCCACTGCTCGGGAACATCTAGCAAGATCTCTTCTCAAGTAA

mRNA sequence

ATGCAGGAATCTTGCCCTGCCATTAAAAGCATTCTTCTTTTGGATTCCGAAGGGAAGCGTGTAGCTGTCAAGTATTATTCTGATGACTGGCCTACAAATAGTGCAAAGGAAGCTTTTGAGAAAGCCGTTTTCATCAAAACTCAGAAGACAAATGCTCGAACAGAGGCGGAGATAGCAATGTTTGAGAGCAATATAGTGGTTTACAAGTTTGCTCAGGACCTTCATTTTTTTGTCACGGGTGGAGAAGATGAAAATGAGCTCATTTTAGCATCCGTTCTTCAGGGGTTTTTTGATGCTGTGGGCATTCTTCTTAGGGGTAATGTAGAAAAGAAGGAGGCACTTGAGAACTTGGACCTCATTTTACTGTGTCTTGATGAAATTATCGACGGAGGCATTGTTCTCGAGACGGATGCAAATGTCATAGCAGGGAAGGTCGCAAGTCACAGTATTGACAGTAATGCTCCTTTGTCTGAGCAGACAATAAGTCAAGCATTGGCCACTGCTCGGGAACATCTAGCAAGATCTCTTCTCAAGTAA

Coding sequence (CDS)

ATGCAGGAATCTTGCCCTGCCATTAAAAGCATTCTTCTTTTGGATTCCGAAGGGAAGCGTGTAGCTGTCAAGTATTATTCTGATGACTGGCCTACAAATAGTGCAAAGGAAGCTTTTGAGAAAGCCGTTTTCATCAAAACTCAGAAGACAAATGCTCGAACAGAGGCGGAGATAGCAATGTTTGAGAGCAATATAGTGGTTTACAAGTTTGCTCAGGACCTTCATTTTTTTGTCACGGGTGGAGAAGATGAAAATGAGCTCATTTTAGCATCCGTTCTTCAGGGGTTTTTTGATGCTGTGGGCATTCTTCTTAGGGGTAATGTAGAAAAGAAGGAGGCACTTGAGAACTTGGACCTCATTTTACTGTGTCTTGATGAAATTATCGACGGAGGCATTGTTCTCGAGACGGATGCAAATGTCATAGCAGGGAAGGTCGCAAGTCACAGTATTGACAGTAATGCTCCTTTGTCTGAGCAGACAATAAGTCAAGCATTGGCCACTGCTCGGGAACATCTAGCAAGATCTCTTCTCAAGTAA

Protein sequence

MQESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAMFESNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILLCLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK*

Homology

[Close]

BLAST of Chy12G206080 vs. ExPASy Swiss-Prot
Match: Q6Z844 (Coatomer subunit zeta-2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ2 PE=2 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 1.6e-73
Identity = 136/177 (76.84%), Postives = 163/177 (92.09%), Query Frame = 0


Query: 2   QESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAMF 61
           +ESCP++K+ILLLDSEGKRVAVKY+SDDW +N++K AFEK+VF KT KTNAR+EAEI +F
Sbjct: 6   KESCPSVKNILLLDSEGKRVAVKYFSDDWSSNASKLAFEKSVFTKTLKTNARSEAEITLF 65

Query: 62  ESNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 121
           +  IVVYKF QDLHFFVT G+DENELI+A+VLQGF D+VG+LLRG+VEK+ ALENLDLIL
Sbjct: 66  DGYIVVYKFVQDLHFFVTAGDDENELIIANVLQGFSDSVGLLLRGDVEKRTALENLDLIL 125

Query: 122 LCLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 179
           LC+DEI+DGGI+LETDAN IAGKVA++++D +AP SEQTISQALATAREHLARSLLK
Sbjct: 126 LCIDEIVDGGIILETDANTIAGKVATNAVDGSAPFSEQTISQALATAREHLARSLLK 182

[Close]

BLAST of Chy12G206080 vs. ExPASy Swiss-Prot
Match: Q84LG4 (Coatomer subunit zeta-2 OS=Arabidopsis thaliana OX=3702 GN=At3g09800 PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.7e-73
Identity = 139/175 (79.43%), Postives = 157/175 (89.71%), Query Frame = 0


Query: 3   ESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAMFE 62
           +SCP +K+ILLLDSEGKRVAVKYYSDDWPTN+AK +FEK VF KT KTNARTEAEI + +
Sbjct: 4   DSCPLVKNILLLDSEGKRVAVKYYSDDWPTNAAKLSFEKYVFSKTSKTNARTEAEITLLD 63

Query: 63  SNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122
           SNI+VYKFAQDLHFFVTGGE+ENELILASVLQGFFDAV +LLR NVEK EALENLDLI L
Sbjct: 64  SNIIVYKFAQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFL 123

Query: 123 CLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLL 178
           CLDE++D G+VLETD NVIAGKVA  S +++  LSEQT++QALATAREHLARSLL
Sbjct: 124 CLDEMVDQGVVLETDPNVIAGKVAMQSTEASGSLSEQTLTQALATAREHLARSLL 178

[Close]

BLAST of Chy12G206080 vs. ExPASy Swiss-Prot
Match: Q940S5 (Coatomer subunit zeta-1 OS=Arabidopsis thaliana OX=3702 GN=At1g60970 PE=2 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 3.5e-73
Identity = 140/173 (80.92%), Postives = 154/173 (89.02%), Query Frame = 0


Query: 6   PAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAMFESNI 65
           P +K+ILLLDSEGKRVAVKYYSDDWPTNSA+EAFEK+VF KTQKTNARTE E+   E+NI
Sbjct: 5   PKVKNILLLDSEGKRVAVKYYSDDWPTNSAQEAFEKSVFTKTQKTNARTEVEVTALENNI 64

Query: 66  VVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILLCLD 125
           VVYKF QDLHFFVTGGE+ENELILASVL+G FDAV +LLR NV+K+EAL+NLDLI L  D
Sbjct: 65  VVYKFVQDLHFFVTGGEEENELILASVLEGLFDAVTLLLRSNVDKREALDNLDLIFLSFD 124

Query: 126 EIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 179
           EIIDGGIVLETDANVIAGK   +S D NAPLSEQTISQALATAREHL RSL+K
Sbjct: 125 EIIDGGIVLETDANVIAGKAGINSTDPNAPLSEQTISQALATAREHLTRSLMK 177

[Close]

BLAST of Chy12G206080 vs. ExPASy Swiss-Prot
Match: Q8H1F4 (Coatomer subunit zeta-3 OS=Arabidopsis thaliana OX=3702 GN=At4g08520 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.0e-72
Identity = 139/175 (79.43%), Postives = 157/175 (89.71%), Query Frame = 0


Query: 3   ESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAMFE 62
           +SCP +K+ILLLDSEGKRVAVKYYSDDW TN++K AFEK VF KT KTNARTEAEI + E
Sbjct: 6   DSCPLVKNILLLDSEGKRVAVKYYSDDWATNASKLAFEKYVFSKTSKTNARTEAEITLLE 65

Query: 63  SNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122
           SNIVVYKFAQDLHFFVTGGE+ENEL+L+SVLQGFFDAV +LLR NVEK EALENLDLI L
Sbjct: 66  SNIVVYKFAQDLHFFVTGGENENELVLSSVLQGFFDAVALLLRNNVEKMEALENLDLIFL 125

Query: 123 CLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLL 178
           CLDE++D G+VLETDANVIAGKVA  S +++  LSEQT++QALATAREHLARSLL
Sbjct: 126 CLDEMVDQGMVLETDANVIAGKVAMQSAEASGSLSEQTLTQALATAREHLARSLL 180

[Close]

BLAST of Chy12G206080 vs. ExPASy Swiss-Prot
Match: Q9MAX5 (Coatomer subunit zeta-1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ1 PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.2e-68
Identity = 132/175 (75.43%), Postives = 152/175 (86.86%), Query Frame = 0


Query: 3   ESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAMFE 62
           ESCP++K+ILLLDSEGKRVAVKYY+DDWPT SAK AFEK+VF+KTQK  A  EAEI MF+
Sbjct: 2   ESCPSVKNILLLDSEGKRVAVKYYTDDWPTLSAKLAFEKSVFVKTQKATAGAEAEIVMFD 61

Query: 63  SNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122
            +IVVYKF QDLHFFVTGGE+ENELILASVLQGF DAV I+LR NV+K+ ALENLDLILL
Sbjct: 62  GHIVVYKFIQDLHFFVTGGEEENELILASVLQGFTDAVDIILRNNVDKRTALENLDLILL 121

Query: 123 CLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLL 178
           CLDEI+DGGIVLET+ +VIA KV++H I+    L+EQTI QAL TAREHL +SLL
Sbjct: 122 CLDEIVDGGIVLETEGSVIAEKVSAHGIEGATSLAEQTIVQALTTAREHLTKSLL 176

[Close]

BLAST of Chy12G206080 vs. ExPASy TrEMBL
Match: A0A0A0LUZ4 (Coatomer subunit zeta OS=Cucumis sativus OX=3659 GN=Csa_1G448990 PE=3 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 8.0e-89
Identity = 175/176 (99.43%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 3   ESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAMFE 62
           ESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEK+VFIKTQKTNARTEAEIAMFE
Sbjct: 2   ESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKSVFIKTQKTNARTEAEIAMFE 61

Query: 63  SNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122
           SNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL
Sbjct: 62  SNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121

Query: 123 CLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 179
           CLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK
Sbjct: 122 CLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of Chy12G206080 vs. ExPASy TrEMBL
Match: A0A5D3DB03 (Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00210 PE=3 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.0e-88
Identity = 173/178 (97.19%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MQESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAM 60
           MQESCP+IK+ILLLDSEGKRVAVKYYSDDWPTNS KEAFEKAVFIKTQKTNARTEAEIAM
Sbjct: 1   MQESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAM 60

Query: 61  FESNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLI 120
           FE+NIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLI
Sbjct: 61  FENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLI 120

Query: 121 LLCLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 179
           LLCLDEIIDGGI+LETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK
Sbjct: 121 LLCLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 178

[Close]

BLAST of Chy12G206080 vs. ExPASy TrEMBL
Match: A0A1S3B9E0 (Coatomer subunit zeta OS=Cucumis melo OX=3656 GN=LOC103487438 PE=3 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.5e-87
Identity = 171/176 (97.16%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 3   ESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAMFE 62
           ESCP+IK+ILLLDSEGKRVAVKYYSDDWPTNS KEAFEKAVFIKTQKTNARTEAEIAMFE
Sbjct: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMFE 61

Query: 63  SNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122
           +NIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL
Sbjct: 62  NNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121

Query: 123 CLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 179
           CLDEIIDGGI+LETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK
Sbjct: 122 CLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of Chy12G206080 vs. ExPASy TrEMBL
Match: A0A6J1EIB5 (Coatomer subunit zeta OS=Cucurbita moschata OX=3662 GN=LOC111434347 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.6e-87
Identity = 171/178 (96.07%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 1   MQESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAM 60
           MQESCP+IK+ILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAM
Sbjct: 1   MQESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAM 60

Query: 61  FESNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLI 120
           FE+NIVVYKF QDLHFFVTGGEDENELILASVLQGFFDAVGILLR NVEKKEALENLDLI
Sbjct: 61  FENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRSNVEKKEALENLDLI 120

Query: 121 LLCLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 179
           LLCLDEIIDGGI+LETDANVIAGKVASHSIDS APLSEQTISQALATAREHLARSLLK
Sbjct: 121 LLCLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 178

[Close]

BLAST of Chy12G206080 vs. ExPASy TrEMBL
Match: A0A6J1K2M3 (Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111490490 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 9.8e-87
Identity = 169/178 (94.94%), Postives = 174/178 (97.75%), Query Frame = 0


Query: 1   MQESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAM 60
           MQESCP+IK+ILLLDSEGKRVAVKYYSDDWPTNS KEAFEKAVF KTQKTNARTEAEIAM
Sbjct: 1   MQESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFTKTQKTNARTEAEIAM 60

Query: 61  FESNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLI 120
           FE+NIVVYKF QDLHFFVTGGEDENELILASVLQGFFDAVG+LLRGNVEKKEALENLDLI
Sbjct: 61  FENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGLLLRGNVEKKEALENLDLI 120

Query: 121 LLCLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 179
           LLCLDEIIDGGI+LETDANVIAGKVASHSIDS APLSEQTISQALATAREHLARSLLK
Sbjct: 121 LLCLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 178

[Close]

BLAST of Chy12G206080 vs. NCBI nr
Match: XP_011657415.1 (coatomer subunit zeta-1 [Cucumis sativus] >KGN65568.1 hypothetical protein Csa_019631 [Cucumis sativus])

HSP 1 Score: 335 bits (858), Expect = 2.03e-115
Identity = 175/176 (99.43%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 3   ESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAMFE 62
           ESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEK+VFIKTQKTNARTEAEIAMFE
Sbjct: 2   ESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKSVFIKTQKTNARTEAEIAMFE 61

Query: 63  SNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122
           SNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL
Sbjct: 62  SNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121

Query: 123 CLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 178
           CLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK
Sbjct: 122 CLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of Chy12G206080 vs. NCBI nr
Match: KAA0057104.1 (coatomer subunit zeta-1-like [Cucumis melo var. makuwa] >TYK20639.1 coatomer subunit zeta-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 334 bits (857), Expect = 2.99e-115
Identity = 173/178 (97.19%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MQESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAM 60
           MQESCP+IK+ILLLDSEGKRVAVKYYSDDWPTNS KEAFEKAVFIKTQKTNARTEAEIAM
Sbjct: 1   MQESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAM 60

Query: 61  FESNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLI 120
           FE+NIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLI
Sbjct: 61  FENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLI 120

Query: 121 LLCLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 178
           LLCLDEIIDGGI+LETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK
Sbjct: 121 LLCLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 178

[Close]

BLAST of Chy12G206080 vs. NCBI nr
Match: XP_038895635.1 (coatomer subunit zeta-2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 333 bits (855), Expect = 6.03e-115
Identity = 173/178 (97.19%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MQESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAM 60
           MQESCP+IK+ILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAM
Sbjct: 1   MQESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAM 60

Query: 61  FESNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLI 120
           FE+NIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLI
Sbjct: 61  FENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLI 120

Query: 121 LLCLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 178
           LLCLDEIIDGGI+LETDANVIAGKVASHSIDS APLSEQTISQALATAREHLARSLLK
Sbjct: 121 LLCLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 178

[Close]

BLAST of Chy12G206080 vs. NCBI nr
Match: XP_008443986.1 (PREDICTED: coatomer subunit zeta-1-like [Cucumis melo])

HSP 1 Score: 330 bits (847), Expect = 9.66e-114
Identity = 171/176 (97.16%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 3   ESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAMFE 62
           ESCP+IK+ILLLDSEGKRVAVKYYSDDWPTNS KEAFEKAVFIKTQKTNARTEAEIAMFE
Sbjct: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFIKTQKTNARTEAEIAMFE 61

Query: 63  SNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122
           +NIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL
Sbjct: 62  NNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121

Query: 123 CLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 178
           CLDEIIDGGI+LETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK
Sbjct: 122 CLDEIIDGGIILETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of Chy12G206080 vs. NCBI nr
Match: XP_038895636.1 (coatomer subunit zeta-1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 330 bits (845), Expect = 1.95e-113
Identity = 171/176 (97.16%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 3   ESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAMFE 62
           ESCP+IK+ILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAMFE
Sbjct: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAMFE 61

Query: 63  SNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122
           +NIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL
Sbjct: 62  NNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121

Query: 123 CLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 178
           CLDEIIDGGI+LETDANVIAGKVASHSIDS APLSEQTISQALATAREHLARSLLK
Sbjct: 122 CLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of Chy12G206080 vs. TAIR 10
Match: AT1G60970.1 (SNARE-like superfamily protein )

HSP 1 Score: 275.8 bits (704), Expect = 2.5e-74
Identity = 140/173 (80.92%), Postives = 154/173 (89.02%), Query Frame = 0


Query: 6   PAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAMFESNI 65
           P +K+ILLLDSEGKRVAVKYYSDDWPTNSA+EAFEK+VF KTQKTNARTE E+   E+NI
Sbjct: 5   PKVKNILLLDSEGKRVAVKYYSDDWPTNSAQEAFEKSVFTKTQKTNARTEVEVTALENNI 64

Query: 66  VVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILLCLD 125
           VVYKF QDLHFFVTGGE+ENELILASVL+G FDAV +LLR NV+K+EAL+NLDLI L  D
Sbjct: 65  VVYKFVQDLHFFVTGGEEENELILASVLEGLFDAVTLLLRSNVDKREALDNLDLIFLSFD 124

Query: 126 EIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK 179
           EIIDGGIVLETDANVIAGK   +S D NAPLSEQTISQALATAREHL RSL+K
Sbjct: 125 EIIDGGIVLETDANVIAGKAGINSTDPNAPLSEQTISQALATAREHLTRSLMK 177

[Close]

BLAST of Chy12G206080 vs. TAIR 10
Match: AT3G09800.1 (SNARE-like superfamily protein )

HSP 1 Score: 275.8 bits (704), Expect = 2.5e-74
Identity = 139/175 (79.43%), Postives = 156/175 (89.14%), Query Frame = 0


Query: 3   ESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAMFE 62
           +SCP +K ILLLDSEGKRVAVKYYSDDWPTN+AK +FEK VF KT KTNARTEAEI + +
Sbjct: 4   DSCPLVKKILLLDSEGKRVAVKYYSDDWPTNAAKLSFEKYVFSKTSKTNARTEAEITLLD 63

Query: 63  SNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122
           SNI+VYKFAQDLHFFVTGGE+ENELILASVLQGFFDAV +LLR NVEK EALENLDLI L
Sbjct: 64  SNIIVYKFAQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFL 123

Query: 123 CLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLL 178
           CLDE++D G+VLETD NVIAGKVA  S +++  LSEQT++QALATAREHLARSLL
Sbjct: 124 CLDEMVDQGVVLETDPNVIAGKVAMQSTEASGSLSEQTLTQALATAREHLARSLL 178

[Close]

BLAST of Chy12G206080 vs. TAIR 10
Match: AT4G08520.1 (SNARE-like superfamily protein )

HSP 1 Score: 274.2 bits (700), Expect = 7.2e-74
Identity = 139/175 (79.43%), Postives = 157/175 (89.71%), Query Frame = 0


Query: 3   ESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAMFE 62
           +SCP +K+ILLLDSEGKRVAVKYYSDDW TN++K AFEK VF KT KTNARTEAEI + E
Sbjct: 6   DSCPLVKNILLLDSEGKRVAVKYYSDDWATNASKLAFEKYVFSKTSKTNARTEAEITLLE 65

Query: 63  SNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122
           SNIVVYKFAQDLHFFVTGGE+ENEL+L+SVLQGFFDAV +LLR NVEK EALENLDLI L
Sbjct: 66  SNIVVYKFAQDLHFFVTGGENENELVLSSVLQGFFDAVALLLRNNVEKMEALENLDLIFL 125

Query: 123 CLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLL 178
           CLDE++D G+VLETDANVIAGKVA  S +++  LSEQT++QALATAREHLARSLL
Sbjct: 126 CLDEMVDQGMVLETDANVIAGKVAMQSAEASGSLSEQTLTQALATAREHLARSLL 180

The following BLAST results are available for this feature:

BLAST of Chy12G206080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6Z844	1.6e-73	76.84	Coatomer subunit zeta-2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ2 PE=2 S...	[more]
Q84LG4	2.7e-73	79.43	Coatomer subunit zeta-2 OS=Arabidopsis thaliana OX=3702 GN=At3g09800 PE=2 SV=1	[more]
Q940S5	3.5e-73	80.92	Coatomer subunit zeta-1 OS=Arabidopsis thaliana OX=3702 GN=At1g60970 PE=2 SV=1	[more]
Q8H1F4	1.0e-72	79.43	Coatomer subunit zeta-3 OS=Arabidopsis thaliana OX=3702 GN=At4g08520 PE=2 SV=1	[more]
Q9MAX5	1.2e-68	75.43	Coatomer subunit zeta-1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ1 PE=2 S...	[more]

BLAST of Chy12G206080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUZ4	8.0e-89	99.43	Coatomer subunit zeta OS=Cucumis sativus OX=3659 GN=Csa_1G448990 PE=3 SV=1	[more]
A0A5D3DB03	1.0e-88	97.19	Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold48...	[more]
A0A1S3B9E0	1.5e-87	97.16	Coatomer subunit zeta OS=Cucumis melo OX=3656 GN=LOC103487438 PE=3 SV=1	[more]
A0A6J1EIB5	2.6e-87	96.07	Coatomer subunit zeta OS=Cucurbita moschata OX=3662 GN=LOC111434347 PE=3 SV=1	[more]
A0A6J1K2M3	9.8e-87	94.94	Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111490490 PE=3 SV=1	[more]

BLAST of Chy12G206080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657415.1	2.03e-115	99.43	coatomer subunit zeta-1 [Cucumis sativus] >KGN65568.1 hypothetical protein Csa_0...	[more]
KAA0057104.1	2.99e-115	97.19	coatomer subunit zeta-1-like [Cucumis melo var. makuwa] >TYK20639.1 coatomer sub...	[more]
XP_038895635.1	6.03e-115	97.19	coatomer subunit zeta-2-like isoform X1 [Benincasa hispida]	[more]
XP_008443986.1	9.66e-114	97.16	PREDICTED: coatomer subunit zeta-1-like [Cucumis melo]	[more]
XP_038895636.1	1.95e-113	97.16	coatomer subunit zeta-1-like isoform X2 [Benincasa hispida]	[more]

BLAST of Chy12G206080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60970.1	2.5e-74	80.92	SNARE-like superfamily protein	[more]
AT3G09800.1	2.5e-74	79.43	SNARE-like superfamily protein	[more]
AT4G08520.1	7.2e-74	79.43	SNARE-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.450.60		coord: 1..148 e-value: 4.5E-42 score: 145.4
None	No IPR available	PANTHER	PTHR11043:SF30	COATOMER SUBUNIT ZETA-2-LIKE	coord: 3..178
None	No IPR available	CDD	cd14829	Zeta-COP	coord: 9..144 e-value: 1.11157E-71 score: 210.865
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 8..146 e-value: 3.3E-22 score: 79.0
IPR039652	Coatomer subunit zeta	PANTHER	PTHR11043	ZETA-COAT PROTEIN	coord: 3..178
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 8..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G206080.1	Chy12G206080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component	GO:0030126	COPI vesicle coat
cellular_component	GO:0000139	Golgi membrane