Chy11G205650 (gene) Cucumber (hystrix) v1

Overview
NameChy11G205650
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH11: 25773127 .. 25773552 (-)
RNA-Seq ExpressionChy11G205650
SyntenyChy11G205650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAACTTCAAGTAATTTTTCTTTGCATCATTATTGTATTGAGTTTTTTCCTTTTCTTCATGGTGAGTTCCAAGCATCGAAACGTTGTCATTCAATCAATGGAAATCGTTTGGGTAGTGAAATCGAGTCGTGCGTCGATGTTCCTTGCATCTAACACCATCATTTTGATCCTCTTTGGGAAGAAGTTGAAGTGGTTATCGAGCAAAGAAGAAGAAGAAGAAAGGTGTAAAGATTGTTGTAGTGGGTGTAGTGATGATCATGAGTTGAATAGTTATGAGATAATTTGTGTTGAAGATAGTTGTGATGAAGATTATTGTGAAGAAGGGATGATTCAAGATGATTTAGAGAAGAAGGCTCAAGAGTTTATTGATATGATGAATGCTTTTTGGAGGGAAGAATTGATTCATGATAGGTTTCTTTAG

mRNA sequence

ATGAAGAAACTTCAAGTAATTTTTCTTTGCATCATTATTGTATTGAGTTTTTTCCTTTTCTTCATGGTGAGTTCCAAGCATCGAAACGTTGTCATTCAATCAATGGAAATCGTTTGGGTAGTGAAATCGAGTCGTGCGTCGATGTTCCTTGCATCTAACACCATCATTTTGATCCTCTTTGGGAAGAAGTTGAAGTGGTTATCGAGCAAAGAAGAAGAAGAAGAAAGGTGTAAAGATTGTTGTAGTGGGTGTAGTGATGATCATGAGTTGAATAGTTATGAGATAATTTGTGTTGAAGATAGTTGTGATGAAGATTATTGTGAAGAAGGGATGATTCAAGATGATTTAGAGAAGAAGGCTCAAGAGTTTATTGATATGATGAATGCTTTTTGGAGGGAAGAATTGATTCATGATAGGTTTCTTTAG

Coding sequence (CDS)

ATGAAGAAACTTCAAGTAATTTTTCTTTGCATCATTATTGTATTGAGTTTTTTCCTTTTCTTCATGGTGAGTTCCAAGCATCGAAACGTTGTCATTCAATCAATGGAAATCGTTTGGGTAGTGAAATCGAGTCGTGCGTCGATGTTCCTTGCATCTAACACCATCATTTTGATCCTCTTTGGGAAGAAGTTGAAGTGGTTATCGAGCAAAGAAGAAGAAGAAGAAAGGTGTAAAGATTGTTGTAGTGGGTGTAGTGATGATCATGAGTTGAATAGTTATGAGATAATTTGTGTTGAAGATAGTTGTGATGAAGATTATTGTGAAGAAGGGATGATTCAAGATGATTTAGAGAAGAAGGCTCAAGAGTTTATTGATATGATGAATGCTTTTTGGAGGGAAGAATTGATTCATGATAGGTTTCTTTAG

Protein sequence

MKKLQVIFLCIIIVLSFFLFFMVSSKHRNVVIQSMEIVWVVKSSRASMFLASNTIILILFGKKLKWLSSKEEEEERCKDCCSGCSDDHELNSYEIICVEDSCDEDYCEEGMIQDDLEKKAQEFIDMMNAFWREELIHDRFL*
Homology
BLAST of Chy11G205650 vs. ExPASy TrEMBL
Match: A0A0A0K9S4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G077350 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 7.8e-55
Identity = 113/120 (94.17%), Postives = 115/120 (95.83%), Query Frame = 0

Query: 22  MVSSKHRNVVIQSMEIVWVVKSSRASMFLASNTIILILFGKKLKWLSSKEEEEERCKDCC 81
           MVS  HRNVV QSMEIV VVKSSRAS+FLASNTIILILFGKKLK LSSKEEEEERCKDCC
Sbjct: 1   MVSFTHRNVVNQSMEIVLVVKSSRASIFLASNTIILILFGKKLKQLSSKEEEEERCKDCC 60

Query: 82  SGCSDDHELNSYEIICVEDSCDEDYCEEGMIQDDLEKKAQEFIDMMNAFWREELIHDRFL 141
           SGCSDDHELNSYE+ICVEDSCDEDYCEEGMIQDDLEKKAQEFIDMMNAFWREELIHDRFL
Sbjct: 61  SGCSDDHELNSYEMICVEDSCDEDYCEEGMIQDDLEKKAQEFIDMMNAFWREELIHDRFL 120

BLAST of Chy11G205650 vs. ExPASy TrEMBL
Match: A0A5A7T9A6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00410 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.3e-38
Identity = 97/120 (80.83%), Postives = 104/120 (86.67%), Query Frame = 0

Query: 22  MVSSKHRNVVIQSMEIVWVVKSSRASMFLASNTIILILFGKKLKWLSSKEEEEERCKDCC 81
           MVSSKHRN +I+ +EI+WVVKSSRASMFLASNTI+LILF +KLK LSSK E+E  CKD C
Sbjct: 1   MVSSKHRNFIIRLIEIIWVVKSSRASMFLASNTIVLILFWEKLKRLSSK-EKESWCKDFC 60

Query: 82  SGCSDDHELNSYEIICVEDSCDEDYCEEGMIQDDLEKKAQEFIDMMNAFWREELIHDRFL 141
           S  SD  ELNS EIICVEDSCDE  CEEG IQDDLEKKAQEFIDMMNAFWREELIHDRFL
Sbjct: 61  SRHSDG-ELNSEEIICVEDSCDEG-CEEG-IQDDLEKKAQEFIDMMNAFWREELIHDRFL 116

BLAST of Chy11G205650 vs. NCBI nr
Match: KAE8646698.1 (hypothetical protein Csa_005140 [Cucumis sativus])

HSP 1 Score: 258 bits (658), Expect = 4.09e-86
Identity = 134/141 (95.04%), Postives = 136/141 (96.45%), Query Frame = 0

Query: 1   MKKLQVIFLCIIIVLSFFLFFMVSSKHRNVVIQSMEIVWVVKSSRASMFLASNTIILILF 60
           MKKLQVIFLCIIIVLSFFLFFMVS  HRNVV QSMEIV VVKSSRAS+FLASNTIILILF
Sbjct: 1   MKKLQVIFLCIIIVLSFFLFFMVSFTHRNVVNQSMEIVLVVKSSRASIFLASNTIILILF 60

Query: 61  GKKLKWLSSKEEEEERCKDCCSGCSDDHELNSYEIICVEDSCDEDYCEEGMIQDDLEKKA 120
           GKKLK LSSKEEEEERCKDCCSGCSDDHELNSYE+ICVEDSCDEDYCEEGMIQDDLEKKA
Sbjct: 61  GKKLKQLSSKEEEEERCKDCCSGCSDDHELNSYEMICVEDSCDEDYCEEGMIQDDLEKKA 120

Query: 121 QEFIDMMNAFWREELIHDRFL 141
           QEFIDMMNAFWREELIHDRFL
Sbjct: 121 QEFIDMMNAFWREELIHDRFL 141

BLAST of Chy11G205650 vs. NCBI nr
Match: KAA0040002.1 (hypothetical protein E6C27_scaffold122G002850 [Cucumis melo var. makuwa] >TYK24499.1 hypothetical protein E5676_scaffold266G00410 [Cucumis melo var. makuwa])

HSP 1 Score: 170 bits (430), Expect = 1.00e-51
Identity = 97/120 (80.83%), Postives = 104/120 (86.67%), Query Frame = 0

Query: 22  MVSSKHRNVVIQSMEIVWVVKSSRASMFLASNTIILILFGKKLKWLSSKEEEEERCKDCC 81
           MVSSKHRN +I+ +EI+WVVKSSRASMFLASNTI+LILF +KLK LSSKE+E   CKD C
Sbjct: 1   MVSSKHRNFIIRLIEIIWVVKSSRASMFLASNTIVLILFWEKLKRLSSKEKESW-CKDFC 60

Query: 82  SGCSDDHELNSYEIICVEDSCDEDYCEEGMIQDDLEKKAQEFIDMMNAFWREELIHDRFL 141
           S  SD  ELNS EIICVEDSCDE  CEEG IQDDLEKKAQEFIDMMNAFWREELIHDRFL
Sbjct: 61  SRHSDG-ELNSEEIICVEDSCDEG-CEEG-IQDDLEKKAQEFIDMMNAFWREELIHDRFL 116

BLAST of Chy11G205650 vs. NCBI nr
Match: KAG6593708.1 (hypothetical protein SDJN03_13184, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 65.5 bits (158), Expect = 7.25e-11
Identity = 46/90 (51.11%), Postives = 56/90 (62.22%), Query Frame = 0

Query: 56  ILILFGKKLKWLSSKE----EEEERCKDCCSGCSDDHELNSYEIICVEDSCDEDYCEEGM 115
           + ILFG+K K   S+E    E+ E  +D       D EL ++ I  V DSCDED  E   
Sbjct: 1   MFILFGEKFKQSPSEEKGIGEQVESYEDYDRR---DDELITHNIY-VYDSCDEDGDER-- 60

Query: 116 IQDDLEKKAQEFIDMMNAFWREELIHDRFL 141
            QDD EKKAQEFI+MM +FWREEL+ DRFL
Sbjct: 61  FQDDFEKKAQEFIEMMYSFWREELVCDRFL 84

BLAST of Chy11G205650 vs. NCBI nr
Match: KAF3952956.1 (hypothetical protein CMV_021553 [Castanea mollissima])

HSP 1 Score: 54.3 bits (129), Expect = 8.58e-06
Identity = 49/161 (30.43%), Postives = 77/161 (47.83%), Query Frame = 0

Query: 9   LCIIIVLSFFLFFMVS---SKHRNVVIQSMEIVWVVKSSRASMFLASNTIILILFGKKLK 68
           LC+II+LS  +FF +S   SK  N  + + E + V KSSR ++F   N I++ +F   L 
Sbjct: 10  LCLIILLSLLIFFSLSLSVSKQHNPFLSTYEFIVVKKSSRVAVFFVFNVIVITIFRGNLS 69

Query: 69  WLSSKE-------------EEEERCKDCCSGCS-DDHELNSYEIICVEDSCDEDYCEEGM 128
           +  S               E ++  KD   G   DD +++  +    +D  DED  ++G 
Sbjct: 70  FKPSDGDFDYFLSFPPIVYEFDDDTKDEAKGEDYDDSDIDDSDEYHGDDGYDEDDDDDGE 129

Query: 129 IQDD-----------LEKKAQEFIDMMNAFWREELIHDRFL 141
             DD           LE + ++FI   +  WREELI++R L
Sbjct: 130 GSDDDVDSDDEQVADLETRIEDFIAKGHRQWREELIYERLL 170

BLAST of Chy11G205650 vs. NCBI nr
Match: XP_017191961.1 (uncharacterized protein LOC108174907 [Malus domestica])

HSP 1 Score: 53.9 bits (128), Expect = 1.28e-05
Identity = 48/160 (30.00%), Postives = 77/160 (48.12%), Query Frame = 0

Query: 9   LCIIIVLSFFLFFMVS---SKHRNVVIQSMEIVWVVKSSRASMFLASNTI-ILILFG--- 68
           LC+ I L  F+ F +S   S+H N ++ + E + V KS+R ++F   N I I I+FG   
Sbjct: 15  LCLAIPLILFISFSLSLSVSQHHNFLLSTYEFIVVAKSNRVAVFFMFNVIFITIVFGSFR 74

Query: 69  ------KKLKWLSSKEEEEERCKDCCSGCSDDHELNSYEIICVEDSCDEDYCEEGMIQDD 128
                 ++ +  +  +EEE + +D     S D+E  S       D  DED  ++G   DD
Sbjct: 75  PSKEEFERYEVKNDTKEEERKVEDYYCDYSSDYEEGSEYY--GSDGYDEDEDDDGSYDDD 134

Query: 129 --------------LEKKAQEFIDMMNAFWREELIHDRFL 141
                         LE++ ++FI  +   WREEL +D F+
Sbjct: 135 IDSEDFFGEEKDSDLERRTEDFIAKVTTKWREELRYDMFM 172

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K9S47.8e-5594.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G077350 PE=4 SV=1[more]
A0A5A7T9A61.3e-3880.83Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAE8646698.14.09e-8695.04hypothetical protein Csa_005140 [Cucumis sativus][more]
KAA0040002.11.00e-5180.83hypothetical protein E6C27_scaffold122G002850 [Cucumis melo var. makuwa] >TYK244... [more]
KAG6593708.17.25e-1151.11hypothetical protein SDJN03_13184, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAF3952956.18.58e-0630.43hypothetical protein CMV_021553 [Castanea mollissima][more]
XP_017191961.11.28e-0530.00uncharacterized protein LOC108174907 [Malus domestica][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy11G205650.1Chy11G205650.1mRNA