Chy11G205230 (gene) Cucumber (hystrix) v1

Overview
NameChy11G205230
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH11: 25506765 .. 25507337 (+)
RNA-Seq ExpressionChy11G205230
SyntenyChy11G205230
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATAGCCCAAGAATTGAAACAATTTACAAGAGATATGAACATTCTCAGCGGCTTTCCACGCGATTTTCTTTTGCTCCCCTATTCTATTTATTCCTCTTCTCTGCACATTGAATTTCGCGGCATTCTCTCTTTTGCTGATCACTTTTCACCTTTTTCTCAACAGTGAGCACCTTCTTTCCTCTTCTGATTTATGCCATGTGTTCTTTACTGTTGTAAATTCTTTACTTTTCTTGAATTCGTTTGATAAATTCTGACTTGGGTGTACTTTGAATTCTCGATGAATTGCAAAAGGTTTCGAATTGGGTTACTCTGTGAACAAAAATGGTGGGGAAAATTTGGGAAATTGATTTAATTTAATTTGCTCTTCTATTTGCAGTTGCCCATGTGCTAAATGTGAGGAAATAATTGAAATTTTAGAAGATGTTTCTCTTTGATGGTCAATTTAAGCTTATGAAGTTTCGAAATAATTGTTTGTGTTGTGTCTTATTGCATGTAATTTAAGAATGGGACAACTATGATTTTTTCACACTTACCCCCAAATTTAATGTCTGCAGATCCTTCTTATTGA

mRNA sequence

ATGAAAATAGCCCAAGAATTGAAACAATTTACAAGAGATATGAACATTCTCAGCGGCTTTCCACGCGATTTTCTTTTGCTCCCCTATTCTATTTATTCCTCTTCTCTGCACATTGAATTTCGCGGCATTCTCTCTTTTGCTGATCACTTTTCACCTTTTTCTCAACATTGCCCATGTGCTAAATATCCTTCTTATTGA

Coding sequence (CDS)

ATGAAAATAGCCCAAGAATTGAAACAATTTACAAGAGATATGAACATTCTCAGCGGCTTTCCACGCGATTTTCTTTTGCTCCCCTATTCTATTTATTCCTCTTCTCTGCACATTGAATTTCGCGGCATTCTCTCTTTTGCTGATCACTTTTCACCTTTTTCTCAACATTGCCCATGTGCTAAATATCCTTCTTATTGA

Protein sequence

MKIAQELKQFTRDMNILSGFPRDFLLLPYSIYSSSLHIEFRGILSFADHFSPFSQHCPCAKYPSY*
Homology
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BLAST of Chy11G205230 vs. NCBI nr
Match: KGN46283.1 (hypothetical protein Csa_005738 [Cucumis sativus])

HSP 1 Score: 45.8 bits (107), Expect = 1.83e-04
Identity = 31/71 (43.66%), Postives = 35/71 (49.30%), Query Frame = 0 

Query: 1  MKIAQELKQFTRDMNILSGFPRDFLLLPYSIYSSSLHIEFRGILSFADH------FSPFS 60
          MKIAQELKQF +            L   +S  +  L I     L+FA        F  FS
Sbjct: 1  MKIAQELKQFYKRYEHSQR-----LSTRFSFATPILFIPLLCTLNFAAFSLSLITFHLFS 60

Query: 61 QHCPCAKYPSY 65
          QHCPCAKYPSY
Sbjct: 61 QHCPCAKYPSY 66

The following BLAST results are available for this feature:
BLAST of Chy11G205230 vs.
Match NameE-valueIdentityDescription
BLAST of Chy11G205230 vs.
Match NameE-valueIdentityDescription
BLAST of Chy11G205230 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46283.11.83e-0443.66hypothetical protein Csa_005738 [Cucumis sativus][more]
BLAST of Chy11G205230 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy11G205230.1Chy11G205230.1mRNA