Chy11G204090 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G204090
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Coiled-coil domain-containing protein SCD2
Location	chrH11: 24656412 .. 24657797 (+)
RNA-Seq Expression	Chy11G204090
Synteny	Chy11G204090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAGTTCTTCTCAGTGCAGCAAATCCACACTCACTGCGAATCTTCCCACTCAATCAAGCTTGTTTCAGGGCCTCCTTCCTGGTACTGACCATCCACATCTCCTCTCTCGTTTCTTCTTCCTTTCATTGAATTCTTTCTAACTTTCCTCAAAATTTGCAGTGGAAAAACCTCCTTGCTTTTTCAGTTCGCTTTTAATTTGGGTCTGGAGGGCAATGTTACCTTCATCTGCAACCGCCGCAAATTAGAAAGCAAACCTCCATATCTTTCTCAGGCATCTCTCTCACTTTTTCTGCTTCAGTTTCTTTTATTGGCGGTTATATTGAATAGCATAGAATGATGTACATTTTCTGAATCTTGGGGTTCTTTGGGACTAACATTCAGGGAGTTGATCCAACATCCGAGACCTTTCAGCGTATACAAATGAAGTCGGTGATCGTTTTATACTTTGTACTAATTGGGTTGCCATATTTGATGATTGAGTACTTCTGCCCTTCCTTTAATTGCTTTACTTGAACCTGTATTCTCTAATTCTGAATTCCAAGGTATTTGGAGGACGACGATGGAATTAAGAAGTACTTCTCTGCGTTTCACTTACATAGTACACTTCCTGTGGCGGTTGTTATTGATGATTTTGGGGATTTTTTCGAGGAAAGGTCTTCAAATTTTCCATTACTTTTTTTTTAATTATCTTTTTATAGGTTTTTCTTTCTCCTTTTCACTTCATCATCTATTGAACAGGCGATGTCAAGAAAAGTATGCTAATCCTCGCGGAAGAGATTTAGCAATGGTTAGAACATTAGCTCTTTGTCACAATGCCGTGAGTCTAGCAAAGTAGGTTTGCATATATCAGAACTTTCTGTGAATACATTGATCTCTTAGATTACATCTACACCCTTTTCTTTACTGCTTATAACTAAGAAGATTTTTCAGTCAATGTAGGCCTTGCCAGCTTGTGTTGTCCGATACACACCATGGAGAGTCCCCAAGGTTGATTTTCATATATAAGAGATGGGTTCCAACCATTTTCACCATAAGAGGTTAGTTTGAGTTGAGTGACTGCTCAACCTAAATTCAAAGCAGATTTCCTTGTTTTTTGTTATTTGTGTTTTACATGGTCAAGCCAGAAAGTACAGATCTGCAAGTGGAGCAAACTAATTCTGTGGCCTTCATGATGGTTAACTTAGCTGATATGCCATTTTGACCTTTTCTTATTGAATTAATTTTGGTTTATGTTGTAGGTGATGGGGCTGGTTGGTTCATCCTGAGAAGTATTAACAATTGTGGAATCGATTGTTGTTTGAGGACTAAAAGAGCAAAGTATTCGATTGCTCTTCAGTTTCTGAGTTTGGAGGAAATTTCTGAAGACAGTAGGGAACAGTGA

mRNA sequence

ATGGAAAAGTTCTTCTCAGTGCAGCAAATCCACACTCACTGCGAATCTTCCCACTCAATCAAGCTTGTTTCAGGGCCTCCTTCCTGTGGAAAAACCTCCTTGCTTTTTCAGTTCGCTTTTAATTTGGGTCTGGAGGGCAATGTTACCTTCATCTGCAACCGCCGCAAATTAGAAAGCAAACCTCCATATCTTTCTCAGGGAGTTGATCCAACATCCGAGACCTTTCAGCGTATACAAATGAAGTATTTGGAGGACGACGATGGAATTAAGAAGTACTTCTCTGCGTTTCACTTACATAGTACACTTCCTGTGGCGGTTGTTATTGATGATTTTGGGGATTTTTTCGAGGAAAGGCGATGTCAAGAAAAGTATGCTAATCCTCGCGGAAGAGATTTAGCAATGGTTAGAACATTAGCTCTTTGTCACAATGCCGTGAGTCTAGCAAATCAATGTAGGCCTTGCCAGCTTGTGTTGTCCGATACACACCATGGAGAGTCCCCAAGGTTGATTTTCATATATAAGAGATGGGTTCCAACCATTTTCACCATAAGAGGTGATGGGGCTGGTTGGTTCATCCTGAGAAGTATTAACAATTGTGGAATCGATTGTTGTTTGAGGACTAAAAGAGCAAAGTATTCGATTGCTCTTCAGTTTCTGAGTTTGGAGGAAATTTCTGAAGACAGTAGGGAACAGTGA

Coding sequence (CDS)

ATGGAAAAGTTCTTCTCAGTGCAGCAAATCCACACTCACTGCGAATCTTCCCACTCAATCAAGCTTGTTTCAGGGCCTCCTTCCTGTGGAAAAACCTCCTTGCTTTTTCAGTTCGCTTTTAATTTGGGTCTGGAGGGCAATGTTACCTTCATCTGCAACCGCCGCAAATTAGAAAGCAAACCTCCATATCTTTCTCAGGGAGTTGATCCAACATCCGAGACCTTTCAGCGTATACAAATGAAGTATTTGGAGGACGACGATGGAATTAAGAAGTACTTCTCTGCGTTTCACTTACATAGTACACTTCCTGTGGCGGTTGTTATTGATGATTTTGGGGATTTTTTCGAGGAAAGGCGATGTCAAGAAAAGTATGCTAATCCTCGCGGAAGAGATTTAGCAATGGTTAGAACATTAGCTCTTTGTCACAATGCCGTGAGTCTAGCAAATCAATGTAGGCCTTGCCAGCTTGTGTTGTCCGATACACACCATGGAGAGTCCCCAAGGTTGATTTTCATATATAAGAGATGGGTTCCAACCATTTTCACCATAAGAGGTGATGGGGCTGGTTGGTTCATCCTGAGAAGTATTAACAATTGTGGAATCGATTGTTGTTTGAGGACTAAAAGAGCAAAGTATTCGATTGCTCTTCAGTTTCTGAGTTTGGAGGAAATTTCTGAAGACAGTAGGGAACAGTGA

Protein sequence

MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLESKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ*

Homology

[Close]

BLAST of Chy11G204090 vs. ExPASy TrEMBL
Match: A0A0A0K9H1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091880 PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 4.0e-133
Identity = 229/231 (99.13%), Postives = 230/231 (99.57%), Query Frame = 0


Query: 1   MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLESK 60
           MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLE+K
Sbjct: 1   MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 61  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120

Query: 121 QEKYANPRGRDLAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180
           QEKYANPRGRDLAMVRTLALC NAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 121 QEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 181 FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 232
           FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ
Sbjct: 181 FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 231

[Close]

BLAST of Chy11G204090 vs. ExPASy TrEMBL
Match: A0A1S3CAT0 (uncharacterized protein LOC103498887 OS=Cucumis melo OX=3656 GN=LOC103498887 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 1.9e-130
Identity = 224/231 (96.97%), Postives = 228/231 (98.70%), Query Frame = 0


Query: 1   MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLESK 60
           MEKFFSVQQIHT CESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLE+K
Sbjct: 1   MEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 61  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPTSETF+RIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120

Query: 121 QEKYANPRGRDLAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180
           Q KYANPRGRD+AMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 121 QAKYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 181 FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 232
           FTIRGDGAGWFILRSINNCG DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Sbjct: 181 FTIRGDGAGWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 231

[Close]

BLAST of Chy11G204090 vs. ExPASy TrEMBL
Match: E5GB61 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 1.9e-130
Identity = 224/231 (96.97%), Postives = 228/231 (98.70%), Query Frame = 0


Query: 1   MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLESK 60
           MEKFFSVQQIHT CESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLE+K
Sbjct: 1   MEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 61  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPTSETF+RIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120

Query: 121 QEKYANPRGRDLAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180
           Q KYANPRGRD+AMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 121 QAKYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 181 FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 232
           FTIRGDGAGWFILRSINNCG DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Sbjct: 181 FTIRGDGAGWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 231

[Close]

BLAST of Chy11G204090 vs. ExPASy TrEMBL
Match: A0A5A7T9Y8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G001280 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 4.6e-129
Identity = 222/231 (96.10%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLESK 60
           MEKFFSVQQIHT CESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLE+K
Sbjct: 56  MEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 115

Query: 61  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPTSETF+RIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC
Sbjct: 116 PPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 175

Query: 121 QEKYANPRGRDLAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180
           Q KYANPRGRD+AMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 176 QAKYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 235

Query: 181 FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 232
           FTIRGDG  WFILRSINNCG DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Sbjct: 236 FTIRGDGTRWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 286

[Close]

BLAST of Chy11G204090 vs. ExPASy TrEMBL
Match: A0A5D3DM33 (Coiled-coil domain-containing protein SCD2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001970 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 1.8e-125
Identity = 219/231 (94.81%), Postives = 224/231 (96.97%), Query Frame = 0


Query: 1   MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLESK 60
           MEKFFSVQQIHT CESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNR KLE+K
Sbjct: 630 MEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRSKLENK 689

Query: 61  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPTSETF+RIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC
Sbjct: 690 PPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 749

Query: 121 QEKYANPRGRDLAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180
           Q KYANPRGRD+AMVRTLALCHNAVSLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 750 QAKYANPRGRDIAMVRTLALCHNAVSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTI 809

Query: 181 FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 232
           FTIRGDGAGWFILRSINNCG DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Sbjct: 810 FTIRGDGAGWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 857

[Close]

BLAST of Chy11G204090 vs. NCBI nr
Match: XP_011656789.1 (uncharacterized protein LOC101205665 [Cucumis sativus] >KAE8646754.1 hypothetical protein Csa_004885 [Cucumis sativus])

HSP 1 Score: 479 bits (1233), Expect = 1.34e-170
Identity = 229/231 (99.13%), Postives = 230/231 (99.57%), Query Frame = 0


Query: 1   MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLESK 60
           MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLE+K
Sbjct: 15  MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 74

Query: 61  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC
Sbjct: 75  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 134

Query: 121 QEKYANPRGRDLAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180
           QEKYANPRGRDLAMVRTLALC NAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 135 QEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 194

Query: 181 FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 231
           FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ
Sbjct: 195 FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 245

[Close]

BLAST of Chy11G204090 vs. NCBI nr
Match: XP_008459907.1 (PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo] >XP_008459908.1 PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo] >ADN33703.1 hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 470 bits (1210), Expect = 2.58e-167
Identity = 224/231 (96.97%), Postives = 228/231 (98.70%), Query Frame = 0


Query: 1   MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLESK 60
           MEKFFSVQQIHT CESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLE+K
Sbjct: 1   MEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 61  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPTSETF+RIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120

Query: 121 QEKYANPRGRDLAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180
           Q KYANPRGRD+AMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 121 QAKYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 181 FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 231
           FTIRGDGAGWFILRSINNCG DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Sbjct: 181 FTIRGDGAGWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 231

[Close]

BLAST of Chy11G204090 vs. NCBI nr
Match: KAA0039853.1 (uncharacterized protein E6C27_scaffold122G001280 [Cucumis melo var. makuwa])

HSP 1 Score: 466 bits (1198), Expect = 1.29e-164
Identity = 222/231 (96.10%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLESK 60
           MEKFFSVQQIHT CESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLE+K
Sbjct: 56  MEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 115

Query: 61  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPTSETF+RIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC
Sbjct: 116 PPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 175

Query: 121 QEKYANPRGRDLAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180
           Q KYANPRGRD+AMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 176 QAKYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 235

Query: 181 FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 231
           FTIRGDG  WFILRSINNCG DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Sbjct: 236 FTIRGDGTRWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 286

[Close]

BLAST of Chy11G204090 vs. NCBI nr
Match: XP_022959968.1 (uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata] >XP_022959970.1 uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata] >XP_022959971.1 uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata])

HSP 1 Score: 443 bits (1139), Expect = 1.86e-156
Identity = 209/228 (91.67%), Postives = 218/228 (95.61%), Query Frame = 0


Query: 3   KFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLESKPP 62
           +FFSV+QI T C+SSHSI LVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLE+KPP
Sbjct: 6   RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 65

Query: 63  YLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQE 122
           YLSQGVDP SETFQRIQMKYLEDD+GI KYFSAFHLH TLPVAVVIDDFGDFFEERRCQE
Sbjct: 66  YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 125

Query: 123 KYANPRGRDLAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 182
           KYANPRGRDLAMVRTLALCHNA+SLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT
Sbjct: 126 KYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 185

Query: 183 IRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSRE 230
           IRGDG+GWFILRSINNCG +CCLRTK AKYSIALQFLSLEE+SED  E
Sbjct: 186 IRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE 233

[Close]

BLAST of Chy11G204090 vs. NCBI nr
Match: XP_038906786.1 (uncharacterized protein LOC120092706 isoform X1 [Benincasa hispida])

HSP 1 Score: 444 bits (1141), Expect = 2.36e-156
Identity = 211/231 (91.34%), Postives = 219/231 (94.81%), Query Frame = 0


Query: 1   MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLESK 60
           MEKFFSV+QIHTHC+SSHSI LVSGPPSCGKTSLLFQFAFNLGL+GNVTFICNRRKLE+K
Sbjct: 29  MEKFFSVRQIHTHCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLKGNVTFICNRRKLENK 88

Query: 61  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPTSETFQRIQMKYLEDD+GIKKYFSAFHLH TLPVAVVIDDFGDFFEERRC
Sbjct: 89  PPYLSQGVDPTSETFQRIQMKYLEDDEGIKKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 148

Query: 121 QEKYANPRGRDLAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180
           Q+KYANPRGRDLAMVRTLALCHNAVSLAN  RPCQLVLSD +HGESPRLIFIYKRWVPTI
Sbjct: 149 QDKYANPRGRDLAMVRTLALCHNAVSLANPSRPCQLVLSDAYHGESPRLIFIYKRWVPTI 208

Query: 181 FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 231
           FTI GDG GWF LRSINNCG DCCLR + AKYSIALQFLSLEEISEDS EQ
Sbjct: 209 FTITGDGFGWFTLRSINNCGNDCCLRARSAKYSIALQFLSLEEISEDSSEQ 259

[Close]

BLAST of Chy11G204090 vs. TAIR 10
Match: AT3G23255.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. )

HSP 1 Score: 246.1 bits (627), Expect = 2.7e-65
Identity = 125/236 (52.97%), Postives = 168/236 (71.19%), Query Frame = 0


Query: 1   MEKFFSVQQIHTHCESSH---SIKLVSGPPSCGKTSLLFQFAFNLGLEGNVT---FICNR 60
           +E+FF  ++  +  + +H   ++ L+SGP S GKTSLLFQ A N+      T   FIC+R
Sbjct: 2   VERFFPTKR--SSGDENHRRGNLSLLSGPISSGKTSLLFQLALNVASASTTTRVVFICHR 61

Query: 61  RKLESKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLH--STLPVAVVIDDFG 120
           +K+ES PP+LSQG+DP+S+ F RIQ+KY++DD+GI+KYF+AFHLH    LP AV+IDDFG
Sbjct: 62  KKIESNPPFLSQGIDPSSDVFNRIQIKYVDDDEGIRKYFAAFHLHHVDDLPSAVIIDDFG 121

Query: 121 DFFEERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFI 180
           D+F +        N R RD+AMVRTLALCHNA+  AN+   C+LVLS+T+HG+SPR +FI
Sbjct: 122 DYFSK---LNSVMNSRARDMAMVRTLALCHNAIVDANRKALCELVLSETNHGDSPRSLFI 181

Query: 181 YKRWVPTIFTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDS 229
           YKRW+P IFTI+G G G F+L S +          + AKYSIALQ+L LE+I +DS
Sbjct: 182 YKRWIPKIFTIKGHGDGSFLLTSNDT-------SERSAKYSIALQYLILEQIIDDS 225

[Close]

BLAST of Chy11G204090 vs. TAIR 10
Match: AT3G23255.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 52 Blast hits to 52 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 241.1 bits (614), Expect = 8.7e-64
Identity = 124/236 (52.54%), Postives = 167/236 (70.76%), Query Frame = 0


Query: 1   MEKFFSVQQIHTHCESSH---SIKLVSGPPSCGKTSLLFQFAFNLGLEGNVT---FICNR 60
           +E+FF  ++  +  + +H   ++ L+SGP S GKTSLLFQ A N+      T   FIC+R
Sbjct: 2   VERFFPTKR--SSGDENHRRGNLSLLSGPISSGKTSLLFQLALNVASASTTTRVVFICHR 61

Query: 61  RKLESKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLH--STLPVAVVIDDFG 120
           +K+ES PP+LSQG+DP+S+ F RIQ+KY++DD+GI+KYF+AFHLH    LP AV+IDDFG
Sbjct: 62  KKIESNPPFLSQGIDPSSDVFNRIQIKYVDDDEGIRKYFAAFHLHHVDDLPSAVIIDDFG 121

Query: 121 DFFEERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFI 180
           D+F +        N R RD+AMVRTLALCHNA+  A +   C+LVLS+T+HG+SPR +FI
Sbjct: 122 DYFSK---LNSVMNSRARDMAMVRTLALCHNAIVDAKKAL-CELVLSETNHGDSPRSLFI 181

Query: 181 YKRWVPTIFTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDS 229
           YKRW+P IFTI+G G G F+L S +          + AKYSIALQ+L LE+I +DS
Sbjct: 182 YKRWIPKIFTIKGHGDGSFLLTSNDT-------SERSAKYSIALQYLILEQIIDDS 224

The following BLAST results are available for this feature:

BLAST of Chy11G204090 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G204090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9H1	4.0e-133	99.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091880 PE=4 SV=1	[more]
A0A1S3CAT0	1.9e-130	96.97	uncharacterized protein LOC103498887 OS=Cucumis melo OX=3656 GN=LOC103498887 PE=...	[more]
E5GB61	1.9e-130	96.97	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5A7T9Y8	4.6e-129	96.10	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DM33	1.8e-125	94.81	Coiled-coil domain-containing protein SCD2 OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of Chy11G204090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656789.1	1.34e-170	99.13	uncharacterized protein LOC101205665 [Cucumis sativus] >KAE8646754.1 hypothetica...	[more]
XP_008459907.1	2.58e-167	96.97	PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo] >XP_008459908.1 P...	[more]
KAA0039853.1	1.29e-164	96.10	uncharacterized protein E6C27_scaffold122G001280 [Cucumis melo var. makuwa]	[more]
XP_022959968.1	1.86e-156	91.67	uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata] >XP_0229599...	[more]
XP_038906786.1	2.36e-156	91.34	uncharacterized protein LOC120092706 isoform X1 [Benincasa hispida]	[more]

BLAST of Chy11G204090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23255.2	2.7e-65	52.97	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G23255.1	8.7e-64	52.54	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 15..187 e-value: 4.4E-6 score: 28.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 19..163
None	No IPR available	PANTHER	PTHR28653	FAMILY NOT NAMED	coord: 2..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G204090.1	Chy11G204090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000911	cytokinesis by cell plate formation