Chy11G203210 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G203210
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Glycine--tRNA ligase
Location	chrH11: 23809204 .. 23809859 (+)
RNA-Seq Expression	Chy11G203210
Synteny	Chy11G203210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGCATATTATTTAGAACATGCCAACGTTCACCAGGTTCAGAAACATTTCAACATCTTTGTGGAAGAAGCTCATTCGTTTCTTGCTTTAGGATTAGCAATCCCTGCGTATGTTTCTTCCATTAATTGTATATGGATGCCCAACTCTTTTTTAAAAAAATTCTTTAAAAATATTATTGTTTGTGTAATTATTTTTTGACTAGCAAATGACATACGACATAATAGGTATGATCAGGTTTTGAAGGCATCTCATGCTTTCAACATATTGGACTCAAGAGGCTTCATTGGAGTAACCGAGCGTGCTCGTTATTTTGGTCGAATGCGAAGGTTAGAGCAATAGCTTTAATTTTTCTCTTTCTTCATTTTCTTTCTTCTTAAGCTAGAGACTTGATGCAACTTATGATGAAGATTTTTCTTTTTCTTTTTCCCCGGCATTTGTTCTTATTGGTTGATTTTAGTTTAGATTTCCTTATGTGCTGAAATTAATTTCATTCCATCAGTTTAGCTCGTCAGTGTGTGCAACTGTGGCTGAAAACCCGAGACTTCCTAGGTCATCCACTTGGTGTTGCTTCTGATCCTGTTGATCTTGTATGTCCTAAAGAACTTCTGGATGCAGCGATCAAAAAGGTTAATATATATATATATATATGTTGA

mRNA sequence

ATGAGTGCATATTATTTAGAACATGCCAACGTTCACCAGGTTCAGAAACATTTCAACATCTTTGTGGAAGAAGCTCATTCGTTTCTTGCTTTAGGATTAGCAATCCCTGCGTATGATCAGGTTTTGAAGGCATCTCATGCTTTCAACATATTGGACTCAAGAGGCTTCATTGGAGTAACCGAGCGTGCTCGTTATTTTGGTCGAATGCGAAGTTTAGCTCGTCAGTGTGTGCAACTGTGGCTGAAAACCCGAGACTTCCTAGGTCATCCACTTGGTGTTGCTTCTGATCCTGTTGATCTTGTATGTCCTAAAGAACTTCTGGATGCAGCGATCAAAAAGGTTAATATATATATATATATATGTTGA

Coding sequence (CDS)

ATGAGTGCATATTATTTAGAACATGCCAACGTTCACCAGGTTCAGAAACATTTCAACATCTTTGTGGAAGAAGCTCATTCGTTTCTTGCTTTAGGATTAGCAATCCCTGCGTATGATCAGGTTTTGAAGGCATCTCATGCTTTCAACATATTGGACTCAAGAGGCTTCATTGGAGTAACCGAGCGTGCTCGTTATTTTGGTCGAATGCGAAGTTTAGCTCGTCAGTGTGTGCAACTGTGGCTGAAAACCCGAGACTTCCTAGGTCATCCACTTGGTGTTGCTTCTGATCCTGTTGATCTTGTATGTCCTAAAGAACTTCTGGATGCAGCGATCAAAAAGGTTAATATATATATATATATATGTTGA

Protein sequence

MSAYYLEHANVHQVQKHFNIFVEEAHSFLALGLAIPAYDQVLKASHAFNILDSRGFIGVTERARYFGRMRSLARQCVQLWLKTRDFLGHPLGVASDPVDLVCPKELLDAAIKKVNIYIYIC*

Homology

[Close]

BLAST of Chy11G203210 vs. ExPASy Swiss-Prot
Match: Q8L785 (Glycine--tRNA ligase, chloroplastic/mitochondrial 2 OS=Arabidopsis thaliana OX=3702 GN=EDD1 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 4.4e-43
Identity = 84/115 (73.04%), Postives = 97/115 (84.35%), Query Frame = 0


Query: 1   MSAYYLEHANVHQVQKHFNIFVEEAHSFLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 60
           MS+YYLEHA+V ++QKHF+ F EEA S LALGL IPAYDQ+LK SHAFNILD+RGFIGVT
Sbjct: 266 MSSYYLEHASVDRLQKHFDYFDEEARSLLALGLPIPAYDQLLKTSHAFNILDARGFIGVT 325

Query: 61  ERARYFGRMRSLARQCVQLWLKTRDFLGHPLGVASDPVDLVCPKELLDAAIKKVN 116
           ERARYFGRMRSLARQC QLWL TR+ LGHPLGVAS+PV  VC +  L+   +KV+
Sbjct: 326 ERARYFGRMRSLARQCAQLWLATRESLGHPLGVASEPVPPVCHRAALEKVAEKVS 380

[Close]

BLAST of Chy11G203210 vs. ExPASy Swiss-Prot
Match: Q2RQ44 (Glycine--tRNA ligase alpha subunit OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=glyQ PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.7e-18
Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 0


Query: 2   SAYYLEHANVHQVQKHFNIFVEEAHSFLALGLAIPAYDQVLKASHAFNILDSRGFIGVTE 61
           SA+  E+AN   + +HF    EE  + LA G+ +PAYDQ +KASH FN+LD+RG I VTE
Sbjct: 202 SAHNFEYANTEALFRHFKDAEEECMALLAKGVPLPAYDQCIKASHRFNLLDARGVISVTE 261

Query: 62  RARYFGRMRSLARQCVQLWLKTRDFL 88
           RA Y GR+R+LA+ C + WL+ R  L
Sbjct: 262 RAAYIGRVRALAKGCCEGWLRARGHL 287

[Close]

BLAST of Chy11G203210 vs. ExPASy Swiss-Prot
Match: Q9Z6W0 (Glycine--tRNA ligase OS=Chlamydia pneumoniae OX=83558 GN=glyQS PE=3 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 3.7e-18
Identity = 50/114 (43.86%), Postives = 67/114 (58.77%), Query Frame = 0


Query: 2   SAYYLEHANVHQVQKHFNIFVEEAHSFLALGLAIPAYDQVLKASHAFNILDSRGFIGVTE 61
           S Y  ++AN     KHF  F EEA   L  GL++PAYD V+KASHAFNILD+RG I VTE
Sbjct: 202 SEYNFDYANTEMWFKHFEDFAEEALRTLKNGLSVPAYDFVIKASHAFNILDARGTISVTE 261

Query: 62  RARYFGRMRSLARQCVQLWLKTRDFLGHPLGVASDPVDLVCPKELLDAAIKKVN 116
           R RY  R+R L R     +++ R  L +PL   S   +   PKE  ++ +  ++
Sbjct: 262 RTRYIARIRQLTRLVADSYVEWRASLNYPLLSLSSTSE---PKETSESVVPMIS 312

[Close]

BLAST of Chy11G203210 vs. ExPASy Swiss-Prot
Match: B0B923 (Glycine--tRNA ligase OS=Chlamydia trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B) OX=471472 GN=glyQS PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.9e-18
Identity = 50/105 (47.62%), Postives = 62/105 (59.05%), Query Frame = 0


Query: 2   SAYYLEHANVHQVQKHFNIFVEEAHSFLALGLAIPAYDQVLKASHAFNILDSRGFIGVTE 61
           S Y  E AN     KHF+ F  EA + L  GL +PAYD V+KASHAFN+LDSRG I VTE
Sbjct: 202 SQYNFETANTTMWLKHFDDFSAEALATLDQGLPLPAYDFVIKASHAFNMLDSRGVISVTE 261

Query: 62  RARYFGRMRSLARQCVQLWLKTRDFLGHPLGVASDPVDLVCPKEL 107
           R RY  ++R LAR     ++  R+ LG PL         V PK++
Sbjct: 262 RTRYIAKIRQLARAAADKYVAWRESLGFPLLKTPPSTPTVTPKKI 306

[Close]

BLAST of Chy11G203210 vs. ExPASy Swiss-Prot
Match: P0CE22 (Glycine--tRNA ligase OS=Chlamydia trachomatis (strain D/UW-3/Cx) OX=272561 GN=glyQS PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.9e-18
Identity = 50/105 (47.62%), Postives = 62/105 (59.05%), Query Frame = 0


Query: 2   SAYYLEHANVHQVQKHFNIFVEEAHSFLALGLAIPAYDQVLKASHAFNILDSRGFIGVTE 61
           S Y  E AN     KHF+ F  EA + L  GL +PAYD V+KASHAFN+LDSRG I VTE
Sbjct: 202 SQYNFETANTTMWLKHFDDFSAEALATLDQGLPLPAYDFVIKASHAFNMLDSRGVISVTE 261

Query: 62  RARYFGRMRSLARQCVQLWLKTRDFLGHPLGVASDPVDLVCPKEL 107
           R RY  ++R LAR     ++  R+ LG PL         V PK++
Sbjct: 262 RTRYIAKIRQLARAAADKYVAWRESLGFPLLKTPPSTPTVTPKKI 306

[Close]

BLAST of Chy11G203210 vs. ExPASy TrEMBL
Match: A0A0A0KFM2 (Glycine--tRNA ligase OS=Cucumis sativus OX=3659 GN=Csa_6G106190 PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.6e-54
Identity = 108/115 (93.91%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MSAYYLEHANVHQVQKHFNIFVEEAHSFLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 60
           MSAYYLEHANVHQVQKHFNIF EEAHS LALGLAIPAYDQVLKASHAFNILDSRGFIGVT
Sbjct: 267 MSAYYLEHANVHQVQKHFNIFEEEAHSLLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 326

Query: 61  ERARYFGRMRSLARQCVQLWLKTRDFLGHPLGVASDPVDLVCPKELLDAAIKKVN 116
           ERARYFGRMRSLARQC QLWL TR+ LGHPLGVASDPVDLVCPKELLDAAIKKV+
Sbjct: 327 ERARYFGRMRSLARQCAQLWLITRESLGHPLGVASDPVDLVCPKELLDAAIKKVH 381

[Close]

BLAST of Chy11G203210 vs. ExPASy TrEMBL
Match: A0A6J1DWK5 (Glycine--tRNA ligase OS=Momordica charantia OX=3673 GN=LOC111023800 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.3e-54
Identity = 106/115 (92.17%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MSAYYLEHANVHQVQKHFNIFVEEAHSFLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 60
           MSAYYLEHANVHQVQKHFNIF EEAHS LALGLAIPAYDQVLKASHAFNILDSRGFIGVT
Sbjct: 269 MSAYYLEHANVHQVQKHFNIFEEEAHSLLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 328

Query: 61  ERARYFGRMRSLARQCVQLWLKTRDFLGHPLGVASDPVDLVCPKELLDAAIKKVN 116
           ERARYFGRMRSLARQC QLWLKTR+ LGHPLGV SDPVDLVCPKELL+AA+KKV+
Sbjct: 329 ERARYFGRMRSLARQCAQLWLKTRESLGHPLGVVSDPVDLVCPKELLEAAVKKVH 383

[Close]

BLAST of Chy11G203210 vs. ExPASy TrEMBL
Match: A0A6J1DV61 (Glycine--tRNA ligase OS=Momordica charantia OX=3673 GN=LOC111023800 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.3e-54
Identity = 106/115 (92.17%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MSAYYLEHANVHQVQKHFNIFVEEAHSFLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 60
           MSAYYLEHANVHQVQKHFNIF EEAHS LALGLAIPAYDQVLKASHAFNILDSRGFIGVT
Sbjct: 66  MSAYYLEHANVHQVQKHFNIFEEEAHSLLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 125

Query: 61  ERARYFGRMRSLARQCVQLWLKTRDFLGHPLGVASDPVDLVCPKELLDAAIKKVN 116
           ERARYFGRMRSLARQC QLWLKTR+ LGHPLGV SDPVDLVCPKELL+AA+KKV+
Sbjct: 126 ERARYFGRMRSLARQCAQLWLKTRESLGHPLGVVSDPVDLVCPKELLEAAVKKVH 180

[Close]

BLAST of Chy11G203210 vs. ExPASy TrEMBL
Match: A0A1S4E2Q4 (Glycine--tRNA ligase OS=Cucumis melo OX=3656 GN=LOC103498820 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.4e-54
Identity = 106/115 (92.17%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MSAYYLEHANVHQVQKHFNIFVEEAHSFLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 60
           MSAYYLEHANVHQVQKHF+IF EEAHS LALGLAIPAYDQVLKASHAFNILDSRGFIGVT
Sbjct: 163 MSAYYLEHANVHQVQKHFDIFEEEAHSLLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 222

Query: 61  ERARYFGRMRSLARQCVQLWLKTRDFLGHPLGVASDPVDLVCPKELLDAAIKKVN 116
           ERARYFGRMRSLARQC QLWLKTR+ LGHPLGV SDPVDLVCPKELLDAA+KKV+
Sbjct: 223 ERARYFGRMRSLARQCAQLWLKTRESLGHPLGVVSDPVDLVCPKELLDAAVKKVH 277

[Close]

BLAST of Chy11G203210 vs. ExPASy TrEMBL
Match: A0A1S3CB07 (Glycine--tRNA ligase OS=Cucumis melo OX=3656 GN=LOC103498820 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.4e-54
Identity = 106/115 (92.17%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MSAYYLEHANVHQVQKHFNIFVEEAHSFLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 60
           MSAYYLEHANVHQVQKHF+IF EEAHS LALGLAIPAYDQVLKASHAFNILDSRGFIGVT
Sbjct: 267 MSAYYLEHANVHQVQKHFDIFEEEAHSLLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 326

Query: 61  ERARYFGRMRSLARQCVQLWLKTRDFLGHPLGVASDPVDLVCPKELLDAAIKKVN 116
           ERARYFGRMRSLARQC QLWLKTR+ LGHPLGV SDPVDLVCPKELLDAA+KKV+
Sbjct: 327 ERARYFGRMRSLARQCAQLWLKTRESLGHPLGVVSDPVDLVCPKELLDAAVKKVH 381

[Close]

BLAST of Chy11G203210 vs. NCBI nr
Match: XP_011656852.2 (glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 226 bits (576), Expect = 1.13e-66
Identity = 109/115 (94.78%), Postives = 111/115 (96.52%), Query Frame = 0


Query: 1   MSAYYLEHANVHQVQKHFNIFVEEAHSFLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 60
           MSAYYLEHANVHQVQKHFNIF EEAHS LALGLAIPAYDQVLKASHAFNILDSRGFIGVT
Sbjct: 66  MSAYYLEHANVHQVQKHFNIFEEEAHSLLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 125

Query: 61  ERARYFGRMRSLARQCVQLWLKTRDFLGHPLGVASDPVDLVCPKELLDAAIKKVN 115
           ERARYFGRMRSLARQC QLWLKTR+ LGHPLGVASDPVDLVCPKELLDAAIKKV+
Sbjct: 126 ERARYFGRMRSLARQCAQLWLKTRESLGHPLGVASDPVDLVCPKELLDAAIKKVH 180

[Close]

BLAST of Chy11G203210 vs. NCBI nr
Match: XP_004140508.3 (glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 [Cucumis sativus] >KAE8646780.1 hypothetical protein Csa_005464 [Cucumis sativus])

HSP 1 Score: 226 bits (576), Expect = 5.02e-66
Identity = 109/115 (94.78%), Postives = 111/115 (96.52%), Query Frame = 0


Query: 1   MSAYYLEHANVHQVQKHFNIFVEEAHSFLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 60
           MSAYYLEHANVHQVQKHFNIF EEAHS LALGLAIPAYDQVLKASHAFNILDSRGFIGVT
Sbjct: 267 MSAYYLEHANVHQVQKHFNIFEEEAHSLLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 326

Query: 61  ERARYFGRMRSLARQCVQLWLKTRDFLGHPLGVASDPVDLVCPKELLDAAIKKVN 115
           ERARYFGRMRSLARQC QLWLKTR+ LGHPLGVASDPVDLVCPKELLDAAIKKV+
Sbjct: 327 ERARYFGRMRSLARQCAQLWLKTRESLGHPLGVASDPVDLVCPKELLDAAIKKVH 381

[Close]

BLAST of Chy11G203210 vs. NCBI nr
Match: XP_022156974.1 (glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X3 [Momordica charantia])

HSP 1 Score: 223 bits (567), Expect = 2.16e-65
Identity = 106/115 (92.17%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MSAYYLEHANVHQVQKHFNIFVEEAHSFLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 60
           MSAYYLEHANVHQVQKHFNIF EEAHS LALGLAIPAYDQVLKASHAFNILDSRGFIGVT
Sbjct: 66  MSAYYLEHANVHQVQKHFNIFEEEAHSLLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 125

Query: 61  ERARYFGRMRSLARQCVQLWLKTRDFLGHPLGVASDPVDLVCPKELLDAAIKKVN 115
           ERARYFGRMRSLARQC QLWLKTR+ LGHPLGV SDPVDLVCPKELL+AA+KKV+
Sbjct: 126 ERARYFGRMRSLARQCAQLWLKTRESLGHPLGVVSDPVDLVCPKELLEAAVKKVH 180

[Close]

BLAST of Chy11G203210 vs. NCBI nr
Match: XP_016902504.1 (PREDICTED: glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X3 [Cucumis melo])

HSP 1 Score: 222 bits (566), Expect = 3.00e-65
Identity = 106/115 (92.17%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MSAYYLEHANVHQVQKHFNIFVEEAHSFLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 60
           MSAYYLEHANVHQVQKHF+IF EEAHS LALGLAIPAYDQVLKASHAFNILDSRGFIGVT
Sbjct: 66  MSAYYLEHANVHQVQKHFDIFEEEAHSLLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 125

Query: 61  ERARYFGRMRSLARQCVQLWLKTRDFLGHPLGVASDPVDLVCPKELLDAAIKKVN 115
           ERARYFGRMRSLARQC QLWLKTR+ LGHPLGV SDPVDLVCPKELLDAA+KKV+
Sbjct: 126 ERARYFGRMRSLARQCAQLWLKTRESLGHPLGVVSDPVDLVCPKELLDAAVKKVH 180

[Close]

BLAST of Chy11G203210 vs. NCBI nr
Match: XP_016902503.1 (PREDICTED: glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X2 [Cucumis melo])

HSP 1 Score: 222 bits (566), Expect = 6.84e-65
Identity = 106/115 (92.17%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MSAYYLEHANVHQVQKHFNIFVEEAHSFLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 60
           MSAYYLEHANVHQVQKHF+IF EEAHS LALGLAIPAYDQVLKASHAFNILDSRGFIGVT
Sbjct: 163 MSAYYLEHANVHQVQKHFDIFEEEAHSLLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 222

Query: 61  ERARYFGRMRSLARQCVQLWLKTRDFLGHPLGVASDPVDLVCPKELLDAAIKKVN 115
           ERARYFGRMRSLARQC QLWLKTR+ LGHPLGV SDPVDLVCPKELLDAA+KKV+
Sbjct: 223 ERARYFGRMRSLARQCAQLWLKTRESLGHPLGVVSDPVDLVCPKELLDAAVKKVH 277

[Close]

BLAST of Chy11G203210 vs. TAIR 10
Match: AT3G48110.1 (glycine-tRNA ligases )

HSP 1 Score: 175.3 bits (443), Expect = 3.1e-44
Identity = 84/115 (73.04%), Postives = 97/115 (84.35%), Query Frame = 0


Query: 1   MSAYYLEHANVHQVQKHFNIFVEEAHSFLALGLAIPAYDQVLKASHAFNILDSRGFIGVT 60
           MS+YYLEHA+V ++QKHF+ F EEA S LALGL IPAYDQ+LK SHAFNILD+RGFIGVT
Sbjct: 266 MSSYYLEHASVDRLQKHFDYFDEEARSLLALGLPIPAYDQLLKTSHAFNILDARGFIGVT 325

Query: 61  ERARYFGRMRSLARQCVQLWLKTRDFLGHPLGVASDPVDLVCPKELLDAAIKKVN 116
           ERARYFGRMRSLARQC QLWL TR+ LGHPLGVAS+PV  VC +  L+   +KV+
Sbjct: 326 ERARYFGRMRSLARQCAQLWLATRESLGHPLGVASEPVPPVCHRAALEKVAEKVS 380

The following BLAST results are available for this feature:

BLAST of Chy11G203210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L785	4.4e-43	73.04	Glycine--tRNA ligase, chloroplastic/mitochondrial 2 OS=Arabidopsis thaliana OX=3...	[more]
Q2RQ44	3.7e-18	51.16	Glycine--tRNA ligase alpha subunit OS=Rhodospirillum rubrum (strain ATCC 11170 /...	[more]
Q9Z6W0	3.7e-18	43.86	Glycine--tRNA ligase OS=Chlamydia pneumoniae OX=83558 GN=glyQS PE=3 SV=2	[more]
B0B923	4.9e-18	47.62	Glycine--tRNA ligase OS=Chlamydia trachomatis serovar L2 (strain 434/Bu / ATCC V...	[more]
P0CE22	4.9e-18	47.62	Glycine--tRNA ligase OS=Chlamydia trachomatis (strain D/UW-3/Cx) OX=272561 GN=gl...	[more]

BLAST of Chy11G203210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFM2	2.6e-54	93.91	Glycine--tRNA ligase OS=Cucumis sativus OX=3659 GN=Csa_6G106190 PE=3 SV=1	[more]
A0A6J1DWK5	3.3e-54	92.17	Glycine--tRNA ligase OS=Momordica charantia OX=3673 GN=LOC111023800 PE=3 SV=1	[more]
A0A6J1DV61	3.3e-54	92.17	Glycine--tRNA ligase OS=Momordica charantia OX=3673 GN=LOC111023800 PE=3 SV=1	[more]
A0A1S4E2Q4	4.4e-54	92.17	Glycine--tRNA ligase OS=Cucumis melo OX=3656 GN=LOC103498820 PE=3 SV=1	[more]
A0A1S3CB07	4.4e-54	92.17	Glycine--tRNA ligase OS=Cucumis melo OX=3656 GN=LOC103498820 PE=3 SV=1	[more]

BLAST of Chy11G203210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656852.2	1.13e-66	94.78	glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X2 [Cucumis sativus]	[more]
XP_004140508.3	5.02e-66	94.78	glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 [Cucumis sativus]...	[more]
XP_022156974.1	2.16e-65	92.17	glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X3 [Momordica charan...	[more]
XP_016902504.1	3.00e-65	92.17	PREDICTED: glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X3 [Cucum...	[more]
XP_016902503.1	6.84e-65	92.17	PREDICTED: glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X2 [Cucum...	[more]

BLAST of Chy11G203210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48110.1	3.1e-44	73.04	glycine-tRNA ligases	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002310	Glycine-tRNA ligase, alpha subunit	PFAM	PF02091	tRNA-synt_2e	coord: 1..84 e-value: 9.7E-24 score: 84.1
None	No IPR available	GENE3D	1.20.58.180	Class II aaRS and biotin synthetases; domain 2	coord: 10..89 e-value: 7.5E-30 score: 104.7
None	No IPR available	SUPERFAMILY	55681	Class II aaRS and biotin synthetases	coord: 1..84
IPR006194	Glycine-tRNA synthetase, heterodimeric	PROSITE	PS50861	AA_TRNA_LIGASE_II_GLYAB	coord: 1..81 score: 15.023198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G203210.1	Chy11G203210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006426	glycyl-tRNA aminoacylation
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004820	glycine-tRNA ligase activity
molecular_function	GO:0000166	nucleotide binding