Chy11G203200 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G203200
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Glycine--tRNA ligase alpha subunit
Location	chrH11: 23797844 .. 23808389 (+)
RNA-Seq Expression	Chy11G203200
Synteny	Chy11G203200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTGGCTTGTATTCAGTTTTACAAAATTGGAGAGGCAGTTAGGCTATTTCAAGAGACCAAAGTGGTGTTAGAGGAACATTATGGTGTCTACCATTCTGATACTCTTGCTGTTTCTAGTAATCTTGCTGCTGCTACTTATGATGCTATGGGAAGCGGGAAGGAATCCCTTTTTTTCTTAAAACGTTTTAGCAAAAAGGTATTTGAATTGGAAAACAACTCTTAGAAGAACTCCAAAAGACAATTTGTCTTGTTTGCTAGTTGAGTTTACAGTGTGATATCTTCTAACTCTGTATTGCAATTTTATGATTTGTAGGAAAAACTTTAAATATGCATTTGCAGGTTGCAAAGAGACTCGTTGCCCTTTTTTAATATGCTAAGGCCAAATTACAAGTTAAGTTTAGAGAGAGAATCTGCCCTGAATGAGGTGCAACTCCTGTTACTCTCCGAACTTTGATGAATCAACACCTTTTGAAATGTGCAAAAATCTCTCATCTTGATTTTTTTAGATGAATTTCTGGAGAAACTTAGTTGAAGTTGCATAATTGGATTCTAATTTCAGCATTTTTCTTCAGCTTCTCAATGAAATTGCAGAGAAGTTTTATGGAGTACGGCGCAGAAATCCCTTGCAAGGGATCTTTGGAGATTTCTTGAAGGTGATTTTCTCTCTCACAATCTTCGTCCACTTGATGTTTGAATTAAGTTTAATTCATACTTTGATTCTTTTACTCGTATGCTTGTTTTTTTGTTACTCGTATGCTTGTTTTTTTTTTGTTTCTAAACTTTTATACATTTCTTTTACTACTAAATTTTGCAGAAAAAAAAAACACCAAACATCAGTACATATTCAAGTCATTTACTTCATAATGACTGCATTTACTTGCACATGACCACATATTTGAATCCACATATGATATTAAGTTTTGTTAATGAAAAGATAATTTCATCATTTGAAAAGTTTCGGAGGGTAAAATAAAATAGTGACAGGTAAAGAACTACAATGGAATTGAACCCTCGAGGGATGTTTGGGGCATTCAAGAAATCTAGAGTATATATATGTTGGATTTAGGAAGTCTATTTGTATGGTATGTCATTGGTTGGCAAAATAGTGACAGGTGAAGAACTAAAATATCAAACATTATACATTTTGGTGTGTATTTATTTTGCTGACGAGGATGAAGCCCTGAATGCGAAAGAATTGAATCCAGTTGAGGATGAATACAAGCCAATCCCATTTGGTTCAGATTACCAACCAATGACATACCATACAAATAGACTTCCACATCATAACTCTCAATTTTCTGACTATGCAACCTACAAAAAAAATATTTATTTTATAAGAATGATATTCTTTTCATCATTGAGATATAAAGTGATATCCACGTGTTGTGTTGTGATATGACAGCACGTAAAAGTTGAAAATGTTGAAAATCACCTTGAAACATGTAGTAATATACCATGATCATTTTATTTATTTAATTTTTTTTTATTAAGGTCCTAAAACATAAATTTTGAATATTGCCCTAAGACTTCAATACTATACTTTAATTCAACCAACTACCAATAAACATAGAACAAGAAATTGGAACAAGTCTGAATTATTAATATCACAAAGCCTGAATACATGAATTATCAATATGAATAAAGATGAAACAAGTCTAAACTCAAGTTGGATAGTTTTTAGAAGCTTTAAATTGTTAGCTTTTCAACATAGTCAACAAAATATGAAGCATACCCAAATAATACTTTAAATTAACTTTAAGCATAAAGTAGCTAAAAAGTAAGAAAAAGCCTCATGCTACTAAATTAATTGAAAACAACAGCAGCAACAGAAAATCAGCTTGATTGAACAAGTTCTTAATAATCTTTTCATTAAGCTAAACAAGCTAAACCACACCATTCTTTCGATCTATCCAAAAGCAAACAACCTAAATGTTGAATTTCATATTGATTCCTCCCAACATGTATATATGTCTAAACATGAAACCAAAAGTTTTCAATATTGCATAAGCTTAAAAAAGACATGAAATTGAGATAATTAGAAAAGTTACCCCATGAATGGAAAATACCCAAGTGAAGAGGATTTAGAGGGGAAAAGAAAAGCCAAGGAAAATTCAATTCCAGGAAGGAAGATCAAAGAGCAGGTCCTGAGAATTAAAAGAGTCATAGTGTTGATAGTTGAAAAGAACCCAGTTGGAGAATTAGAAAAATCTGATGGAAAGACAGAGAATGAGATAGAGAAATTTGCAACTTCTTATAGTATACTAGAACAAGAAATTGGAAGCAACACTTCTACTTTTTCTAAGTAACGAAGGAGAGAAAAAACAAATAAGTGAAGAAAGATAAGAAGTAATTGCCAACACACATTTTTCTTTCTTCGGCACATAATTGAAACAAGATACAAAACAAACTTAAAAGACAGATAAATCATTAATCAAATCACCCCTCCCCATTGTCGGCCTCAGCAACACCACTCGATAGGTGGTGGCGCACGAACGGAGAAGACGAACAAAAACTATCAACTGACGATTGAAGGTGGTGGCGCACAAATGGGAAGAGCAACGGGGAAGACGAACGGGGAGGTGGTCATTTGATGATGGGAGAAAATGGGGGAAGAGGGTAAAAAAATTGGAGGAAAAACTTAGGGATTTTTTTAGAAATGGAGGAAAGGAAAAATTGGGGGAAAACTTAGGTTTTTTTTGTAGAAATGGGGGAAAGGGAAATTTGGGGAAATCAAAAGATGTAATTTTTTAAAAAATAAAATGATGAAATATATTAGTTGACATTTAGAAAATGTCAAGTAATTACCACTAATTTTGACGTTTTTAATCTGTCAAGTATTTGAAATAAAAAATAAAAAAAAATTCTTTTTTTACTAATTGTTATTCTTGACGTTTTTTACATTACTTGACAGTTTTTATTAGAAACGTCGAGTATTTCAAAACTACAAACGTCAAATATTGTCAGTTTTGTAGTAGTGGTATAAAGCTTAGCGGCTTGAGCAACAAGGACGAATCTGTATGTTCTTGAATGTTGTGATACAGTAATCTAAAAGCGAGGTGATGAGACCAAGCGTAGAGAACAATTCGGGATCCTTGGCGAAATGAAATAATTTTTTGAGCATAAAGAAAGGTTTATGCGAAATGAAATGATTTGTAGGTATGTTTAAATGATTTGATATTATTTTTGGAAAATGATTATGAAAAGGTATTACGAAAGGTTTTCATAAAACCTCATTAAGTCGTTTAGGCTTACGTTTTAAAAATCTATCTTCCATGATCAGACGTTTAGGCCAAGTAGTAGAGAACAAGGTTGAAGGATTTGCGGCGAAGTGATTCAAGCCATTTTGGAAATGGTTAAGCATCGGTTATTTGGTCAAAGCATTGAAATAATGTATAAAACGTCTGTTGTTAATAAAGTATACGTTTTAGTTTGTATTTAATTTTTTTGGCATTACATTGACCATCGTTGCGTTTTGAGTGGTGTTAATAGTTTAAAAGAGTTGAGAATAAGATTTTCGATAAGACAATTTCAAGGTTGTAACTAACTCACATCCTATTTCCACTACTTCAACGTTTTGGTCTCAGTGCGGTTTAGGGTGTGACATCTTGTCCAGTATGTCTGAGAGACCATGGTCACGACACGTCAGATCATGGACTTCCTCCAAAAGATGTTTAAGAAGAATGAAAAAGAAGGTAAATATGATTTACTTGGCTTAGAAACATGTTTAGTGAAAAATGACTAAAATGCCTGGAAACATGATTCACGAACAACTAGCCATGTTTGCTCTTCTTTAAAAGGAAATCAGATCCTTTAAGCAACTCGAGGAGGGTGAGATGACTCTCAAGGTTGGAATGGAAGATGTCATTGTGAGAGATGTTAAGTTGTCTTTCAGAAATAAATTTCTGTTTATAGAAAATTTGTACATAATTCTTAAGATTAAAAGAAATTTTATATTTATTTCTCGTCTTATTGAACAATCATAGAGTTAAATTGTTTGAAATTTATGCTTCTTCCTTTTTTCTTCATTTTCTTTATAGATCATAAAGGAATGGAATGCAGAGCTCCAAGAGCGTACAGGAAAGTTTCGAAAGCAGGTCGATGCTATTGCTGAGTGGGATAGGAGGATTATGCAAAATCGTGATATTCTTCTTAGACTTGAGGTGTTATGTCACTTAATACCAAGATTTTTAAATCTTCAATGAGATATGAAATTTAACTTGCTATTATGTCTGTTCTAACAAAACATGTGGAAATGATTATAAGAAAGGATAGTTCTAGTTAATGAATTTTTGGACCATCTGATCCTTGTACTATTCAAACTCTGAGTATATTTGTTAGGAAATCTTTAATTAAAGTGTTCACATCCCTTTATTCTTTCAATGCTCAGTTCAATTTTACCTCAATGTTTCGTCTCCCAACTGATTCTAATTTTGTTATTTCAAGGGTCATTTAAAGAATTGAAAAGCTGCAATAACCAAAGGGACTAATGGAAAGTAGGCCTAATCAGCAGAAATGATGAAAGGGAAATAAATACAAGTCTTTTTTCACAGGAACGACCACCCTGAAAGTAACCTAAACTACTAGATAAAAAGAATGTCACACTCACCATCTCTCTTTTTAATTTCTTTTTATCTATTTATATTTATATTTTGCTCGAAGCTACTTTTCTTAGGTTTTTTGTGAAAAACAAAAAGAAATTTTTTCAAAATCTTCAATGTGAAAGGAGACATCAAAGTACACGCTGGATCTTGAGTGGCATATTTCGTCTTCTTTGTCGGAATTTATTTTGCATATTAGTGCTTTGGTTTTTGTACTGCTCCTCTTTACTCGATAAACTGATGAGAATTCTTCATTAGGATGGCCTTCAAAGGGATTTGCTTTTTTATTGTTTTTGTTGTTGCGTTTTATTAATCTTCAGGCTGCAGTCTTTTCCTGAATTCTTTATTGGTTTGTATTTTGTTGCATTTGTATTTGTTTTGTTTTTGTTTCATTTTACGTTGAGCATTAATCTCTTTTTATTTTATTTTATTGATGAAAAGTGTTAGTTTTCTTTTTGGGAAAAATGTACATACCGGACTCTTTGTATCTTAATGATTCACTTAATTTCTATTTCTTTATATCTTCGTTGATCAAATGGGTTATCTTAAATTGTTATTATGTATTTATTTTTATTTAAAAGTTGTCTCTTTTCTTCTTAGTGAGTCTGTAACTTAAAACAATCTGTATTGCTTTGTAAAAAGCACATTTACAAATAAAGACAGACCATTGCAGGGATTATCCACCATAGAGATAAAAACCAGTTGCCATCAAAGCTTAAGGAAGGTGATTTAAATGATTCTGTTTCGAAATCAAAATGAACATCCTTGTTATTGGGACCTTAATCACGTGAGGATACAATGAATTTAGTTTAATTTTAAAATATAACCAAATGAATAAAAAGAAAATTGGCATTTATAATAACTTCCGTGGTAAGTTGAAGTTCTTTTTTTACAGTAAAAAATAGAAGTTGAAATATTTTACTAAGAAAGTTATTATAAAAGGAGGGAAGGGCAAAAGATAGTACAAAATTCTTGTGCTCGTCCACTTCCATTTCCATTTTTGCAAAAAATCGTAAGAACAGGATGTGGTCATTCAGAGTCACCGTCGACGATATGAAGGTTTTGATAGATCCGTTGATAACATTGGGATTGGTGGATGTAATGGCGGATGCAATATTTTCACCGGACACGTTTTGCATAATGGCGGATTCGGATGTTTCCATTCACAGCGCCTTCGGACTTCAACTCTGGCCTCCATTCTTCGACAGTTTCTACTCCGACGAGGTTCGTCAACTGTTCTGGTTCCGCCTTACTCATCTTTTCCCTCTCGCCGTAGAATTGCTAGAATCTGGTTACACTTCTCTAACCTTCTCTATCGAACGCTTCCGTTACAATTACGCCCAATTCAAATTCGAAGGACCAAACGGTAAGTCTTCTTCTACTTCTTCTTTAATTCTTTCTTCTTTTTTTTTCAAGATTTTTATTTGTTTGATTTCTTGAATGTAATTCTGTTTTCTAGGGCTTCTTCGCGATGTTAATTTCCTATTGACTCCGGTCGTCCGTCCCTTGAGGATTGGCCAAATCGATCTATCTGCTTTTGTTACCATGGATTCTGAAGAATTCTCCAACATCATTTCTGAATATCATATGTTTGATTACGGTAAATTACTACATTTTTTGTCAATTTCAATTTTAGTCAATAGAGAAACCCTAAACCCTTGTTATTATTTACAGTTGAAGTTATTATAACGAGCAGACGGGTGTCATTCTCTTATGCAATTATACAAGAGACAATTATTACTCCAGAGGTATATGATTTTAATTTTGAATTTTGCGGATGTTAATTAATCAATTGATATAAAAGTATGATTTAATTGTTGGTAATAATTAATGTAGGATGGGCAATGCCTAATTGGGGGTGTTAGAGCACCAAATCAAGTTCAGTTCATAATTACTATGAGTCAACCAGATGCTTTCTATCATTTTGCAAGTCAATCGAAGAGAATATGGCTCTTTAAGGAAGTTAATTCTACCAAAGGAATAATTACTGCCCCTCTTGGAGTGTATGGTCGACTTGTCTCTTTCTTTTGTGATGTCACTACACTGCCCATGTAACTGAATTACATATAATTCAATATTATATGTCTCTCTGTCTTCTTTTTTGTATAAAAATAATCACATTTGTTCAAGGGGTTCTGCATAATCTTGATGATTGAATCACATATAATTCAATACTATATGTTTCTTTGTTTTCCTTGTTGTATAAAAATAATGACGTATGTTCAAGAAGTGTAGTTGGAATTTGTTAGGCATGAAATAAACATACATATGATCGAATAAGACTTGAACCTAGGCTTGGAGAGAGTTGGGAGACTGTTTTAATATGAGCTAACTTTTAAAATTGATATATGATTCCAGTTTATATATATATATATATATAATACAAATAGCATGAAAGTTGAACACTCTCAATATCGGTCGTGCATTTACATATGATTTTTCAATTCAATTAATGAGAATACGGAATTGTCCAGCTTTGACTTTCTTTTTCAACTTCCTAGTAAAAAGTAATTTGAAAGCGAATATTTATCAAAGGATAGATAAGCCGTGCTTATATTGATTAACATAATAAGTTTAGGCATTTGATGAATATTAATAAAATATTAAATATTAGACGTGTCATAGTATCAATTTTTTATTAAACAATTTTATTCATCTTTGTCAAAATGAATTAAATTCAAGTGATATAGTATTTCTCAAAGTCAAATATTTAATTTGTCATCTCAATCTATTATAAAGAATAAAAAACGAATCTCATTTTTATATCCATCTAATAGTAAAGATGAGATTCATTACAACATCCATTGTTCCATTCATTTGAAATAAATACAAGTTAACCAGAATAGTGTTGAGAATGGGGAAATGAAGTTCAGATTTTTTCATCAATCTAGCTGTAAATGGTTTACAGTTTCTACCTTTCAGATTACTTGTGGATCTCTGTGTTATTTGTCGAGACACTTGTTAAAGGCAAAGTTCCTTGTGATGATAATACTCTTGGTGAGTTCCTTTGACTTGGTTTCCTGTGTTTCTTTTATAAGAGTATGGGTAGATAATGTTGGGGATGTTATTGGGATATTACTTGTGGCATGATTGTAATTACACAGTAACTCCTCAACACCTTAACCTAGGACGTTGGTTAGACTGGATGGTTAAATAGAGTGGATTAGTGGTTTGAGAAGAGTTGACCTCAATTTCAAAATTTTAAAGAAAAACACACTCTCTCGGTGACGCACTTAGAGAGAGATCGGGAAATTTTCATCAAAAAGTTTTTTAAATTTGGAAAGAATTTCGCGGTTGATCTCGGTTGAGGTTGACCCCGATAAAAACAAATTTATAAGTTTTCTAAAAATGTGCTACGTACTCTTGAAACATAAAACCAAAATTTGGTAGATAATCTCTAGATTCAAGTGTTTTTCTTATGAGAGAGATATTTCGTTATGCTTTGTATTCAGATCTTTTCGTTTTGGTTTTGTTTAGCTTAAACTTTTCTGTTTGGATTTCGCTTTTCTAGCTTGTTCTTTGTGATTGTTTTGTTTTTTTTTTTTTTTTTTTTTTTGTCGTTTTTCCTTTAGTATTGCCTAATTTGTTTGGATGATTTTGTTCTTCTTTTTCTTTTTTGCTCTTTTTTTGAAAAGGAGACAAGCTTCTTTATTATTAATAAACTCAAAGTACAAGAGAGCTATACAATGAAAATAATAGGAAAGCCAAGAAATGGGGGAGAGAGAGAGGATCAGTAGGTGCACCTAGACATCTCAACTAGGTGGTCACCCCCATAGCACCCTCATCATATCCAAATTACAAAGAATAGTTTTTAAAAAATGTTCTTAGTATAATTCTCTTGTAGTTTGAGCATTAGTCTCATTTATTATTATTAATAAAGAGGCTTGTCTCCGTTTCAACAACAAAAAAGAAAAAAAAAACTCCATAAAACCAAAACTAGAAATCACAAAAACAAAATTCCAGTGAGCAGACGAGGTGAGAAGTCCAATAATAAGGCTGAAAGTACGAGGGGTCCAATTACAAACCAAACCAACTTTTAAATTGTTGCTTCCAAATTTACAACTATTAGGAGAAAAATGTAACTTCATAAGTAGCAGGAAGGTGTAGGTGCATAAGCATGAGATGTCCACAAAATAGTTCAATTCACGGACAAAACCACCGAGCTATGCTTTAACTGATGGAGAATAAGGAGGGAAATTGACAAAAGTAGCACACTTTGGGTTTTCATTTTCAAAAGTAAAACATTCTTTTAAAATTCTAAAACTGTTTTTCTCAGTTAATCTCGGGCGAGATTGACCACTGAAATTTCCTTAAAATATTAAAATTTTCCAACTTATCGATTGTTTTGAGTTTTCCCTATGCATCTCGGTAGAATATTTTTTTTGAAAAGGTAAAAAAAATTAAATAAGATTTGGTAAGATTTGAAAAATGGTAGAATCCTGGTCCTAATTGTCTATTGAGATGCATAAGGAAAACTCAAAACAATCGATAAGTTGGAAAATTTTAATATTTTATAGAAATCTCGATGGTTGATCTCGCTCGAGATTGACCGAGAAAAACAGTTTTAAAAAAATGTGCTACTATTGCACAATTCACTGGATGGATAAATCACAATTTACAGTTTTAAAATAGGTAGGATTGGGATGGGAAATCTGGATGGATGGGATGGAGATTACACAATTCACTAACTTTCAGCAGGTATTACTACCTGATCATTTGTTTCTGATAAGTATTATCGGGGTTGTTTGACAATTTAAGTGAAGAATTCCACAAATGCAGCTATGTGTGAACATGATACGCAATGCAAATGTGGAAGAAACTAGTGTAGCAAAATTCACTTCAAGTTGAAAACTTTTTTCCTTTGGTAGAAGTGGCTATCATATGATTGGATATTGTTTCTTCCTGTTTTAGGGAAATTTACTGTTTTTATGTTTTGAAATTCGTTGCATAGATTCAGTTATATATCTTACTTACTTTGTTGATCTCTCTCTATTTTCAGGCTGGAAGTCAACAACTATTGCCTGTATCTGTTGAAATCACGCCTTATGGTCTTGAACGTATTCTCATGTTACTGCAGGTGATACGGTGTCTTTGCTGGCCTTGTAAAAATATTTTGAGTTTAATAAAACAGGATAACTATGGATGTACAAGAGTTTAATTATCATTATTCTTGTGTGAGTGGGAATTTGAAGTCCTCTTTGAAGAAAGCTGTTTGTCATAAAAGAACAAATTTAAATTGTTTAGTTTTTTACTGTTTAGTGGAAAAGAAGATGAACAGTATGTAAATTAAAAAATTTCCCTTTTACATTCTCCTATTATCAGCATATTCTCATTTCTAAACTTTCAAAAGCCTCGCTCCTTTTATAGTGTGTCTTGATTCTTTATTCTTTGTCGTTGGTAAGGCCTAACACTTCTGAATTCTACATGAAAAGATTTTATTTTTCACTGTTGTTGCCCGATTCTGTATTATTGTTATTTTGAATCTAGCTTTATTCTTTGAACAATGGGCATTTTCTTAAAAAGTCTCTCCCATTTTTTTCCCTAATATGTATATTTTTGGCAAGAAATGAAATTGTATTTGTTTGGAGAAGTGATTGTGAAAATGAGATATTTTTCTTCCTCATGACATTAAGGAGTTATGTTTGGAAGAACGAAAGGTTGAAAGATTTTTTTTAAAATGTAGTTTAGCACGTTTTGCCAATTGGGTTGGAAGAAAGCACGTGTTTCAAGAAATGTTGTCAAGAAGTGGCTTTGGACAACACTGTAATTTTTTTATTTTTTGGGCATAGATTCATATTTTCAAGTGATATTCTAGTTTTACGCAGTTTCCCCAATTTCATTGAGTTTTCCTCAATGTGACCTGTGCAGGGTGTTAATCATTTTAAGAAAATTCAGTATGCTGATGGAATCACCTACGGGGAGCTGTTCTTGGAGAACGAGTAA

mRNA sequence

ATGGGATTGGCTTGTATTCAGTTTTACAAAATTGGAGAGGCAGTTAGGCTATTTCAAGAGACCAAAGTGGTGTTAGAGGAACATTATGGTGTCTACCATTCTGATACTCTTGCTGTTTCTAGTAATCTTGCTGCTGCTACTTATGATGCTATGGGAAGCGGGAAGGAATCCCTTTTTTTCTTAAAACGTTTTAGCAAAAAGCTTCTCAATGAAATTGCAGAGAAGTTTTATGGAGTACGGCGCAGAAATCCCTTGCAAGGGATCTTTGGAGATTTCTTGAAGATCATAAAGGAATGGAATGCAGAGCTCCAAGAGCGTACAGGAAAGTTTCGAAAGCAGGTCGATGCTATTGCTGAGTGGGATAGGAGGATTATGCAAAATCGTGATATTCTTCTTAGACTTGAGGAGGGAAGGGCAAAAGATAGTACAAAATTCTTGTGCTCGTCCACTTCCATTTCCATTTTTGCAAAAAATCGTAAGAACAGGATGTGGTCATTCAGAGTCACCGTCGACGATATGAAGGTTTTGATAGATCCGTTGATAACATTGGGATTGGTGGATGTAATGGCGGATGCAATATTTTCACCGGACACGTTTTGCATAATGGCGGATTCGGATGTTTCCATTCACAGCGCCTTCGGACTTCAACTCTGGCCTCCATTCTTCGACAGTTTCTACTCCGACGAGGTTCGTCAACTGTTCTGGTTCCGCCTTACTCATCTTTTCCCTCTCGCCGTAGAATTGCTAGAATCTGGTTACACTTCTCTAACCTTCTCTATCGAACGCTTCCGTTACAATTACGCCCAATTCAAATTCGAAGGACCAAACGGGCTTCTTCGCGATGTTAATTTCCTATTGACTCCGGTCGTCCGTCCCTTGAGGATTGGCCAAATCGATCTATCTGCTTTTGTTACCATGGATTCTGAAGAATTCTCCAACATCATTTCTGAATATCATATGTTTGATTACGTTGAAGTTATTATAACGAGCAGACGGGTGTCATTCTCTTATGCAATTATACAAGAGACAATTATTACTCCAGAGGATGGGCAATGCCTAATTGGGGGTGTTAGAGCACCAAATCAAGTTCAGTTCATAATTACTATGAGTCAACCAGATGCTTTCTATCATTTTGCAAGTCAATCGAAGAGAATATGGCTCTTTAAGGAAGTAGGATTGGGATGGGAAATCTGGATGGATGGGATGGAGATTACACAATTCACTAACTTTCAGCAGGCTGGAAGTCAACAACTATTGCCTGTATCTGTTGAAATCACGCCTTATGGTCTTGAACGTATTCTCATGTTACTGCAGGGTGTTAATCATTTTAAGAAAATTCAGTATGCTGATGGAATCACCTACGGGGAGCTGTTCTTGGAGAACGAGTAA

Coding sequence (CDS)

ATGGGATTGGCTTGTATTCAGTTTTACAAAATTGGAGAGGCAGTTAGGCTATTTCAAGAGACCAAAGTGGTGTTAGAGGAACATTATGGTGTCTACCATTCTGATACTCTTGCTGTTTCTAGTAATCTTGCTGCTGCTACTTATGATGCTATGGGAAGCGGGAAGGAATCCCTTTTTTTCTTAAAACGTTTTAGCAAAAAGCTTCTCAATGAAATTGCAGAGAAGTTTTATGGAGTACGGCGCAGAAATCCCTTGCAAGGGATCTTTGGAGATTTCTTGAAGATCATAAAGGAATGGAATGCAGAGCTCCAAGAGCGTACAGGAAAGTTTCGAAAGCAGGTCGATGCTATTGCTGAGTGGGATAGGAGGATTATGCAAAATCGTGATATTCTTCTTAGACTTGAGGAGGGAAGGGCAAAAGATAGTACAAAATTCTTGTGCTCGTCCACTTCCATTTCCATTTTTGCAAAAAATCGTAAGAACAGGATGTGGTCATTCAGAGTCACCGTCGACGATATGAAGGTTTTGATAGATCCGTTGATAACATTGGGATTGGTGGATGTAATGGCGGATGCAATATTTTCACCGGACACGTTTTGCATAATGGCGGATTCGGATGTTTCCATTCACAGCGCCTTCGGACTTCAACTCTGGCCTCCATTCTTCGACAGTTTCTACTCCGACGAGGTTCGTCAACTGTTCTGGTTCCGCCTTACTCATCTTTTCCCTCTCGCCGTAGAATTGCTAGAATCTGGTTACACTTCTCTAACCTTCTCTATCGAACGCTTCCGTTACAATTACGCCCAATTCAAATTCGAAGGACCAAACGGGCTTCTTCGCGATGTTAATTTCCTATTGACTCCGGTCGTCCGTCCCTTGAGGATTGGCCAAATCGATCTATCTGCTTTTGTTACCATGGATTCTGAAGAATTCTCCAACATCATTTCTGAATATCATATGTTTGATTACGTTGAAGTTATTATAACGAGCAGACGGGTGTCATTCTCTTATGCAATTATACAAGAGACAATTATTACTCCAGAGGATGGGCAATGCCTAATTGGGGGTGTTAGAGCACCAAATCAAGTTCAGTTCATAATTACTATGAGTCAACCAGATGCTTTCTATCATTTTGCAAGTCAATCGAAGAGAATATGGCTCTTTAAGGAAGTAGGATTGGGATGGGAAATCTGGATGGATGGGATGGAGATTACACAATTCACTAACTTTCAGCAGGCTGGAAGTCAACAACTATTGCCTGTATCTGTTGAAATCACGCCTTATGGTCTTGAACGTATTCTCATGTTACTGCAGGGTGTTAATCATTTTAAGAAAATTCAGTATGCTGATGGAATCACCTACGGGGAGCTGTTCTTGGAGAACGAGTAA

Protein sequence

MGLACIQFYKIGEAVRLFQETKVVLEEHYGVYHSDTLAVSSNLAAATYDAMGSGKESLFFLKRFSKKLLNEIAEKFYGVRRRNPLQGIFGDFLKIIKEWNAELQERTGKFRKQVDAIAEWDRRIMQNRDILLRLEEGRAKDSTKFLCSSTSISIFAKNRKNRMWSFRVTVDDMKVLIDPLITLGLVDVMADAIFSPDTFCIMADSDVSIHSAFGLQLWPPFFDSFYSDEVRQLFWFRLTHLFPLAVELLESGYTSLTFSIERFRYNYAQFKFEGPNGLLRDVNFLLTPVVRPLRIGQIDLSAFVTMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQETIITPEDGQCLIGGVRAPNQVQFIITMSQPDAFYHFASQSKRIWLFKEVGLGWEIWMDGMEITQFTNFQQAGSQQLLPVSVEITPYGLERILMLLQGVNHFKKIQYADGITYGELFLENE*

Homology

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BLAST of Chy11G203200 vs. ExPASy Swiss-Prot
Match: Q8L785 (Glycine--tRNA ligase, chloroplastic/mitochondrial 2 OS=Arabidopsis thaliana OX=3702 GN=EDD1 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.6e-27
Identity = 62/71 (87.32%), Postives = 64/71 (90.14%), Query Frame = 0


Query: 392 GLGWEIWMDGMEITQFTNFQQAGSQQLLPVSVEITPYGLERILMLLQGVNHFKKIQYADG 451
           GLGWEIWMDGMEITQFT FQQAGS  L PVSVEIT YGLERI+MLLQ V+HFKKI YADG
Sbjct: 194 GLGWEIWMDGMEITQFTYFQQAGSLPLSPVSVEIT-YGLERIIMLLQEVDHFKKILYADG 253

Query: 452 ITYGELFLENE 463
           ITYGELFLENE
Sbjct: 254 ITYGELFLENE 263

[Close]

BLAST of Chy11G203200 vs. ExPASy Swiss-Prot
Match: B5YES5 (Glycine--tRNA ligase alpha subunit OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) OX=309799 GN=glyQ PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 4.0e-20
Identity = 44/71 (61.97%), Postives = 57/71 (80.28%), Query Frame = 0


Query: 392 GLGWEIWMDGMEITQFTNFQQAGSQQLLPVSVEITPYGLERILMLLQGVNHFKKIQYADG 451
           G+GWE+W+DGMEITQFT FQQ G   L P+S EIT YGLERI M +QG++ FK I++ DG
Sbjct: 124 GIGWEVWLDGMEITQFTYFQQCGGFDLFPISAEIT-YGLERIAMYIQGIDDFKDIKWQDG 183

Query: 452 ITYGELFLENE 463
           ITYG++ L++E
Sbjct: 184 ITYGDIHLQSE 193

[Close]

BLAST of Chy11G203200 vs. ExPASy Swiss-Prot
Match: B8E0E9 (Glycine--tRNA ligase alpha subunit OS=Dictyoglomus turgidum (strain DSM 6724 / Z-1310) OX=515635 GN=glyQ PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.0e-19
Identity = 44/71 (61.97%), Postives = 56/71 (78.87%), Query Frame = 0


Query: 392 GLGWEIWMDGMEITQFTNFQQAGSQQLLPVSVEITPYGLERILMLLQGVNHFKKIQYADG 451
           G+GWE+W+DGMEITQFT FQQ G   L PVS EIT YGLERI M +QGV+ FK I++ D 
Sbjct: 124 GIGWEVWLDGMEITQFTYFQQCGGFDLFPVSAEIT-YGLERIAMYIQGVDDFKAIKWQDN 183

Query: 452 ITYGELFLENE 463
           +TYG++ L++E
Sbjct: 184 VTYGDVHLQSE 193

[Close]

BLAST of Chy11G203200 vs. ExPASy Swiss-Prot
Match: B7KHU5 (Glycine--tRNA ligase alpha subunit OS=Gloeothece citriformis (strain PCC 7424) OX=65393 GN=glyQ PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 9.8e-19
Identity = 44/71 (61.97%), Postives = 54/71 (76.06%), Query Frame = 0


Query: 392 GLGWEIWMDGMEITQFTNFQQAGSQQLLPVSVEITPYGLERILMLLQGVNHFKKIQYADG 451
           G+GWE+W+DGMEITQFT FQQ G     PVS+EIT YGLER+ M LQ V+   KIQ+ D 
Sbjct: 126 GVGWEVWLDGMEITQFTYFQQCGGIDCRPVSIEIT-YGLERLAMYLQNVDAITKIQWNDQ 185

Query: 452 ITYGELFLENE 463
           + YGE+FL+NE
Sbjct: 186 VNYGEIFLQNE 195

[Close]

BLAST of Chy11G203200 vs. ExPASy Swiss-Prot
Match: B2J0V5 (Glycine--tRNA ligase alpha subunit OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=glyQ PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 2.8e-18
Identity = 44/71 (61.97%), Postives = 52/71 (73.24%), Query Frame = 0


Query: 392 GLGWEIWMDGMEITQFTNFQQAGSQQLLPVSVEITPYGLERILMLLQGVNHFKKIQYADG 451
           G GWE+W+DGMEITQFT FQQ G     PVS+EIT YGLER+ M LQ V    KI + D 
Sbjct: 124 GTGWEVWLDGMEITQFTYFQQCGGIDCRPVSIEIT-YGLERLTMYLQQVEAITKIHWTDN 183

Query: 452 ITYGELFLENE 463
           ITYG++FL+NE
Sbjct: 184 ITYGDVFLQNE 193

[Close]

BLAST of Chy11G203200 vs. ExPASy TrEMBL
Match: A0A0A0KFM5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106730 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 4.1e-121
Identity = 219/229 (95.63%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 163 MWSFRVTVDDMKVLIDPLITLGLVDVMADAIFSPDTFCIMADSDVSIHSAFGLQLWPPFF 222
           MWSFRV VDDMKVLID LITLGLVDVMADAIFSPDTFCIMADSD SIHSAFG+QLWPPFF
Sbjct: 1   MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDTFCIMADSDASIHSAFGVQLWPPFF 60

Query: 223 DSFYSDEVRQLFWFRLTHLFPLAVELLESGYTSLTFSIERFRYNYAQFKFEGPNGLLRDV 282
           DSFYSD++RQLFWFRLTHLF LAVELLESGYTSLTFSIERFRYNYAQFKFEGPNGLLRDV
Sbjct: 61  DSFYSDDIRQLFWFRLTHLFTLAVELLESGYTSLTFSIERFRYNYAQFKFEGPNGLLRDV 120

Query: 283 NFLLTPVVRPLRIGQIDLSAFVTMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQE 342
           NFLLTPVVRPLRIGQIDLSAFV+MDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQE
Sbjct: 121 NFLLTPVVRPLRIGQIDLSAFVSMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQE 180

Query: 343 TIITPEDGQCLIGGVRAPNQVQFIITMSQPDAFYHFASQSKRIWLFKEV 392
           TIITPEDGQCLIGGVRAPNQVQFIITMSQP+AF+HFASQSKRIWLFKEV
Sbjct: 181 TIITPEDGQCLIGGVRAPNQVQFIITMSQPNAFFHFASQSKRIWLFKEV 229

[Close]

BLAST of Chy11G203200 vs. ExPASy TrEMBL
Match: A0A5D3DMK7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003150 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 2.6e-115
Identity = 204/229 (89.08%), Postives = 223/229 (97.38%), Query Frame = 0


Query: 163 MWSFRVTVDDMKVLIDPLITLGLVDVMADAIFSPDTFCIMADSDVSIHSAFGLQLWPPFF 222
           MWSFRV+V+DMKVLIDPLITLGLVD+MAD IFSPD FCIMADSDVSIHSAFG++L PPFF
Sbjct: 1   MWSFRVSVNDMKVLIDPLITLGLVDIMADGIFSPDMFCIMADSDVSIHSAFGIELLPPFF 60

Query: 223 DSFYSDEVRQLFWFRLTHLFPLAVELLESGYTSLTFSIERFRYNYAQFKFEGPNGLLRDV 282
           D+FY+DEVRQLFWFRLTHLFPLAV+LLESGYTS TFSIERFRYN+AQF+FEGPNGLLR+V
Sbjct: 61  DTFYADEVRQLFWFRLTHLFPLAVQLLESGYTSFTFSIERFRYNHAQFRFEGPNGLLREV 120

Query: 283 NFLLTPVVRPLRIGQIDLSAFVTMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQE 342
           NFLLTPVVRPL IG+IDLSAFVTMDS+EFSNIISEYHMFDYV+VIIT+RRVSFSYAIIQE
Sbjct: 121 NFLLTPVVRPLSIGEIDLSAFVTMDSQEFSNIISEYHMFDYVQVIITNRRVSFSYAIIQE 180

Query: 343 TIITPEDGQCLIGGVRAPNQVQFIITMSQPDAFYHFASQSKRIWLFKEV 392
           TIITP+DGQC+IGG+R PN+VQFIITMSQPDAFYHFASQSKRIWLFKEV
Sbjct: 181 TIITPQDGQCIIGGIRPPNEVQFIITMSQPDAFYHFASQSKRIWLFKEV 229

[Close]

BLAST of Chy11G203200 vs. ExPASy TrEMBL
Match: A0A0A0KA18 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006750 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 6.2e-109
Identity = 198/229 (86.46%), Postives = 216/229 (94.32%), Query Frame = 0


Query: 163 MWSFRVTVDDMKVLIDPLITLGLVDVMADAIFSPDTFCIMADSDVSIHSAFGLQLWPPFF 222
           MWSFRV VDDMKVLID LITLGLVDVMADAIFSPD FCI+ADSDVS+ SAFGLQLWPPFF
Sbjct: 1   MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDMFCILADSDVSLQSAFGLQLWPPFF 60

Query: 223 DSFYSDEVRQLFWFRLTHLFPLAVELLESGYTSLTFSIERFRYNYAQFKFEGPNGLLRDV 282
           DSFYSD +RQ+FWFRLTHLFPLA+ELLESG TSLTFSIERFR+NYAQFKFEGPNGLLR+V
Sbjct: 61  DSFYSDNLRQIFWFRLTHLFPLALELLESGCTSLTFSIERFRHNYAQFKFEGPNGLLREV 120

Query: 283 NFLLTPVVRPLRIGQIDLSAFVTMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQE 342
           NF LTP+VRPLRIGQIDLSAFVTMDS+EFS IIS+Y+MFDYVEVIITSRRVSFS + IQE
Sbjct: 121 NFRLTPIVRPLRIGQIDLSAFVTMDSQEFSYIISQYNMFDYVEVIITSRRVSFSSSTIQE 180

Query: 343 TIITPEDGQCLIGGVRAPNQVQFIITMSQPDAFYHFASQSKRIWLFKEV 392
           T I+ EDG+C++GGVRAP QVQFIITMSQP+AF+HFASQSKRIWLFKEV
Sbjct: 181 TTISAEDGRCIVGGVRAPVQVQFIITMSQPNAFFHFASQSKRIWLFKEV 229

[Close]

BLAST of Chy11G203200 vs. ExPASy TrEMBL
Match: A0A1S3CBB9 (uncharacterized protein LOC103498776 OS=Cucumis melo OX=3656 GN=LOC103498776 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 5.3e-68
Identity = 131/226 (57.96%), Postives = 167/226 (73.89%), Query Frame = 0


Query: 165 SFRVTVDDMKVLIDPLITLGLVDVMADAIFSPDTFCIMADSDVSIHSAFGLQLWPPFFDS 224
           SF   V++M+ LID L TLG+ D +ADA FSP+ FC+M DS+VSIHS  GLQLWPPFFD 
Sbjct: 2   SFNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDSNVSIHSTIGLQLWPPFFDH 61

Query: 225 FYSDEVRQLFWFRLTHLFPLAVELLESGYTSLTFSIERFRYNYAQFKFEGPNGLLRDVNF 284
           ++  E+ Q  WF    +FPLA +L +SGYTS +FSI     + AQ KF+GPNGLL + NF
Sbjct: 62  YFCSEL-QYSWFFFNEIFPLAQDLQDSGYTSFSFSIGP-NPDLAQIKFQGPNGLLHETNF 121

Query: 285 LLTPVVRPLRIGQIDLSAFVTMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQETI 344
            L     PLRI   DLS FV+MDS+EFSN+IS+YHMFD V V ITS RV FSY+I+QETI
Sbjct: 122 ELVYSHHPLRIPDFDLSVFVSMDSQEFSNVISQYHMFDDVHVTITSERVIFSYSIMQETI 181

Query: 345 ITPEDGQCLIGGVRAPNQVQFIITMSQPDAFYHFASQSKRIWLFKE 391
           +  ++GQC+IGG++APNQVQFI+T+   + F H ASQ+KR+W FK+
Sbjct: 182 LNQQNGQCIIGGIKAPNQVQFILTLGPSEVFNHIASQTKRVWFFKQ 225

[Close]

BLAST of Chy11G203200 vs. ExPASy TrEMBL
Match: A0A0A0LIF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848840 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.0e-63
Identity = 124/228 (54.39%), Postives = 167/228 (73.25%), Query Frame = 0


Query: 163 MWSFRVTVDDMKVLIDPLITLGLVDVMADAIFSPDTFCIMADSDVSIHSAFGLQLWPPFF 222
           M SF   V++M+ L+D   TLGL D   DA FSP+ FC+MADS+VSIHSA GLQLWPPFF
Sbjct: 1   MSSFNFLVNNMRTLVDAFATLGLADHKGDATFSPEMFCLMADSNVSIHSAIGLQLWPPFF 60

Query: 223 DSFYSDEVRQLFWFRLTHLFPLAVELLESGYTSLTFSIERFRYNYAQFKFEGPNGLLRDV 282
           D ++  +++   WF  + +FPLA  L + GYTS +FSI R  + +AQ +F+GP  LL +V
Sbjct: 61  DHYFCRDLKN-SWFFFSEIFPLAQYLKDFGYTSFSFSIGRDPH-HAQIEFQGPTRLLLEV 120

Query: 283 NFLLTPVVRPLRIGQIDLSAFVTMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQE 342
              L     PLRI Q DLS FV+MDS++FSN+IS+YHMFD V V ITS RV FSY+ +QE
Sbjct: 121 TLRLVFCHLPLRIHQFDLSVFVSMDSQQFSNLISQYHMFDDVHVTITSERVIFSYSTMQE 180

Query: 343 TIITPEDGQCLIGGVRAPNQVQFIITMSQPDAFYHFASQSKRIWLFKE 391
           TI++P++GQC+IGG+RAP++V+F+IT+   + F H ASQ+KR+W FK+
Sbjct: 181 TILSPQNGQCIIGGLRAPDEVEFVITLGPQEVFNHIASQTKRVWFFKQ 226

[Close]

BLAST of Chy11G203200 vs. NCBI nr
Match: KAE8646781.1 (hypothetical protein Csa_005116, partial [Cucumis sativus])

HSP 1 Score: 472 bits (1215), Expect = 1.41e-163
Identity = 236/243 (97.12%), Postives = 240/243 (98.77%), Query Frame = 0


Query: 149 STSISIFAKNRKNRMWSFRVTVDDMKVLIDPLITLGLVDVMADAIFSPDTFCIMADSDVS 208
           STSISIFAKNRK RMWSFRV VDDMKVLIDPLITLGLVDVMADAIFSPDTFCIMADSD S
Sbjct: 1   STSISIFAKNRKKRMWSFRVAVDDMKVLIDPLITLGLVDVMADAIFSPDTFCIMADSDAS 60

Query: 209 IHSAFGLQLWPPFFDSFYSDEVRQLFWFRLTHLFPLAVELLESGYTSLTFSIERFRYNYA 268
           IHSAFG+QLWPPFFDSFYSD++RQLFWFRLTHLFPLAVELLESGYTSLTFSIERFRYNYA
Sbjct: 61  IHSAFGVQLWPPFFDSFYSDDIRQLFWFRLTHLFPLAVELLESGYTSLTFSIERFRYNYA 120

Query: 269 QFKFEGPNGLLRDVNFLLTPVVRPLRIGQIDLSAFVTMDSEEFSNIISEYHMFDYVEVII 328
           QFKFEGPNGLLRDVNFLLTPVVRPLRIGQIDLSAFV+MDSEEFSNIISEYHMFDYVEVII
Sbjct: 121 QFKFEGPNGLLRDVNFLLTPVVRPLRIGQIDLSAFVSMDSEEFSNIISEYHMFDYVEVII 180

Query: 329 TSRRVSFSYAIIQETIITPEDGQCLIGGVRAPNQVQFIITMSQPDAFYHFASQSKRIWLF 388
           TSRRVSFSYAIIQETIITPEDGQCLIGGVRAPNQVQFIITMSQPDAFYHFASQSKRIWLF
Sbjct: 181 TSRRVSFSYAIIQETIITPEDGQCLIGGVRAPNQVQFIITMSQPDAFYHFASQSKRIWLF 240

Query: 389 KEV 391
           KEV
Sbjct: 241 KEV 243

[Close]

BLAST of Chy11G203200 vs. NCBI nr
Match: XP_031743834.1 (uncharacterized protein LOC105435987 [Cucumis sativus])

HSP 1 Score: 449 bits (1154), Expect = 1.62e-154
Identity = 223/229 (97.38%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 163 MWSFRVTVDDMKVLIDPLITLGLVDVMADAIFSPDTFCIMADSDVSIHSAFGLQLWPPFF 222
           MWSFRV VDDMKVLIDPLITLGLVDVMADAIFSPDTFCIMADSD SIHSAFG+QLWPPFF
Sbjct: 1   MWSFRVAVDDMKVLIDPLITLGLVDVMADAIFSPDTFCIMADSDASIHSAFGVQLWPPFF 60

Query: 223 DSFYSDEVRQLFWFRLTHLFPLAVELLESGYTSLTFSIERFRYNYAQFKFEGPNGLLRDV 282
           DSFYSD++RQLFWFRLTHLFPLAVELLESGYTSLTFSIERFRYNYAQFKFEGPNGLLRDV
Sbjct: 61  DSFYSDDIRQLFWFRLTHLFPLAVELLESGYTSLTFSIERFRYNYAQFKFEGPNGLLRDV 120

Query: 283 NFLLTPVVRPLRIGQIDLSAFVTMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQE 342
           NFLLTPVVRPLRIGQIDLSAFV+MDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQE
Sbjct: 121 NFLLTPVVRPLRIGQIDLSAFVSMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQE 180

Query: 343 TIITPEDGQCLIGGVRAPNQVQFIITMSQPDAFYHFASQSKRIWLFKEV 391
           TIITPEDGQCLIGGVRAPNQVQFIITMSQPDAFYHFASQSKRIWLFKEV
Sbjct: 181 TIITPEDGQCLIGGVRAPNQVQFIITMSQPDAFYHFASQSKRIWLFKEV 229

[Close]

BLAST of Chy11G203200 vs. NCBI nr
Match: KAA0039744.1 (hypothetical protein E6C27_scaffold122G00040 [Cucumis melo var. makuwa] >TYK24752.1 hypothetical protein E5676_scaffold266G003150 [Cucumis melo var. makuwa])

HSP 1 Score: 420 bits (1079), Expect = 3.53e-143
Identity = 204/229 (89.08%), Postives = 223/229 (97.38%), Query Frame = 0


Query: 163 MWSFRVTVDDMKVLIDPLITLGLVDVMADAIFSPDTFCIMADSDVSIHSAFGLQLWPPFF 222
           MWSFRV+V+DMKVLIDPLITLGLVD+MAD IFSPD FCIMADSDVSIHSAFG++L PPFF
Sbjct: 1   MWSFRVSVNDMKVLIDPLITLGLVDIMADGIFSPDMFCIMADSDVSIHSAFGIELLPPFF 60

Query: 223 DSFYSDEVRQLFWFRLTHLFPLAVELLESGYTSLTFSIERFRYNYAQFKFEGPNGLLRDV 282
           D+FY+DEVRQLFWFRLTHLFPLAV+LLESGYTS TFSIERFRYN+AQF+FEGPNGLLR+V
Sbjct: 61  DTFYADEVRQLFWFRLTHLFPLAVQLLESGYTSFTFSIERFRYNHAQFRFEGPNGLLREV 120

Query: 283 NFLLTPVVRPLRIGQIDLSAFVTMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQE 342
           NFLLTPVVRPL IG+IDLSAFVTMDS+EFSNIISEYHMFDYV+VIIT+RRVSFSYAIIQE
Sbjct: 121 NFLLTPVVRPLSIGEIDLSAFVTMDSQEFSNIISEYHMFDYVQVIITNRRVSFSYAIIQE 180

Query: 343 TIITPEDGQCLIGGVRAPNQVQFIITMSQPDAFYHFASQSKRIWLFKEV 391
           TIITP+DGQC+IGG+R PN+VQFIITMSQPDAFYHFASQSKRIWLFKEV
Sbjct: 181 TIITPQDGQCIIGGIRPPNEVQFIITMSQPDAFYHFASQSKRIWLFKEV 229

[Close]

BLAST of Chy11G203200 vs. NCBI nr
Match: XP_004138491.3 (uncharacterized protein LOC101219791 [Cucumis sativus] >KGN45689.2 hypothetical protein Csa_005131 [Cucumis sativus])

HSP 1 Score: 403 bits (1036), Expect = 1.31e-136
Identity = 200/229 (87.34%), Postives = 217/229 (94.76%), Query Frame = 0


Query: 163 MWSFRVTVDDMKVLIDPLITLGLVDVMADAIFSPDTFCIMADSDVSIHSAFGLQLWPPFF 222
           MWSFRV VDDMKVLID LITLGLVDVMADAIFSPD FCI+ADSDVS+ SAFGLQLWPPFF
Sbjct: 1   MWSFRVAVDDMKVLIDSLITLGLVDVMADAIFSPDMFCILADSDVSLQSAFGLQLWPPFF 60

Query: 223 DSFYSDEVRQLFWFRLTHLFPLAVELLESGYTSLTFSIERFRYNYAQFKFEGPNGLLRDV 282
           DSFYSD +RQ+FWFRLTHLFPLAVELLESGYTSLTFSIERFR+NYAQFKFEGPNGLLR+V
Sbjct: 61  DSFYSDNLRQIFWFRLTHLFPLAVELLESGYTSLTFSIERFRHNYAQFKFEGPNGLLREV 120

Query: 283 NFLLTPVVRPLRIGQIDLSAFVTMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQE 342
           NF LTP+VRPLRIGQIDLSAFVTMDS+EFS IIS+Y+MFDYVEVIITSRRVSFS + IQE
Sbjct: 121 NFRLTPIVRPLRIGQIDLSAFVTMDSQEFSYIISQYNMFDYVEVIITSRRVSFSSSTIQE 180

Query: 343 TIITPEDGQCLIGGVRAPNQVQFIITMSQPDAFYHFASQSKRIWLFKEV 391
           T I+ EDG+C++GGVRAP QVQFIITMSQP+AF+HFASQSKRIWLFKEV
Sbjct: 181 TTISAEDGRCIVGGVRAPVQVQFIITMSQPNAFFHFASQSKRIWLFKEV 229

[Close]

BLAST of Chy11G203200 vs. NCBI nr
Match: XP_038876014.1 (uncharacterized protein LOC120068348 [Benincasa hispida])

HSP 1 Score: 275 bits (702), Expect = 3.75e-86
Identity = 134/224 (59.82%), Postives = 167/224 (74.55%), Query Frame = 0


Query: 166 FRVTVDDMKVLIDPLITLGLVDVMADAIFSPDTFCIMADSDVSIHSAFGLQLWPPFFDSF 225
           F   V+DM+ LI+    +G+VD MAD  FSP+  CIMADS VSI +A G+QLWPPFFD +
Sbjct: 3   FNFVVNDMRTLINAATAVGMVDTMADVTFSPEMLCIMADSYVSIKAAIGIQLWPPFFDHY 62

Query: 226 YSDEVRQLFWFRLTHLFPLAVELLESGYTSLTFSIERFRYNYAQFKFEGPNGLLRDVNFL 285
           +     Q  WF LT +FPL +ELL+SGYTS TFSI       A+ KFEGPNGLL ++ F 
Sbjct: 63  FCINNLQRSWFYLTKIFPLTLELLDSGYTSFTFSIIEPYEERAKLKFEGPNGLLHEIEFK 122

Query: 286 LTPVVRPLRIGQIDLSAFVTMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQETII 345
           L     PL +G+ DLS FV++DS+EFS+I+ EYHMFDYV V ITS RV+FSYAI+QETI+
Sbjct: 123 LYYSHHPLYVGEFDLSVFVSLDSQEFSSIVDEYHMFDYVHVTITSTRVTFSYAIVQETIL 182

Query: 346 TPEDGQCLIGGVRAPNQVQFIITMSQPDAFYHFASQSKRIWLFK 389
           TP+DGQCLIGGVRAPNQ+QFIIT++  + FYH A ++KRIW FK
Sbjct: 183 TPQDGQCLIGGVRAPNQIQFIITLAPAEVFYHIAGEAKRIWFFK 226

[Close]

BLAST of Chy11G203200 vs. TAIR 10
Match: AT3G48110.1 (glycine-tRNA ligases )

HSP 1 Score: 124.8 bits (312), Expect = 1.8e-28
Identity = 62/71 (87.32%), Postives = 64/71 (90.14%), Query Frame = 0


Query: 392 GLGWEIWMDGMEITQFTNFQQAGSQQLLPVSVEITPYGLERILMLLQGVNHFKKIQYADG 451
           GLGWEIWMDGMEITQFT FQQAGS  L PVSVEIT YGLERI+MLLQ V+HFKKI YADG
Sbjct: 194 GLGWEIWMDGMEITQFTYFQQAGSLPLSPVSVEIT-YGLERIIMLLQEVDHFKKILYADG 253

Query: 452 ITYGELFLENE 463
           ITYGELFLENE
Sbjct: 254 ITYGELFLENE 263

[Close]

BLAST of Chy11G203200 vs. TAIR 10
Match: AT2G45000.1 (structural constituent of nuclear pore )

HSP 1 Score: 77.8 bits (190), Expect = 2.6e-14
Identity = 36/47 (76.60%), Postives = 42/47 (89.36%), Query Frame = 0


Query: 94  KIIKEWNAELQERTGKFRKQVDAIAEWDRRIMQNRDILLRLEEGRAK 141
           +IIKEWN ELQERTG+FRKQ +AIAEWD+RI+QNRD+LLRLE   AK
Sbjct: 545 EIIKEWNTELQERTGRFRKQANAIAEWDKRILQNRDVLLRLEIEVAK 591

[Close]

BLAST of Chy11G203200 vs. TAIR 10
Match: AT3G27960.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 7.7e-11
Identity = 35/62 (56.45%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 1   MGLACIQFYKIGEAVRLFQETKVVLEEHYGVYHSDTLAVSSNLAAATYDAMGSGKESLFF 60
           MGLAC+Q Y I EA  LF+E K +LE+  G YH DTLAV SNL A TYDAMG   +++  
Sbjct: 543 MGLACVQRYAINEAADLFEEAKTILEKECGPYHPDTLAVYSNL-AGTYDAMGRLDDAIEI 602

Query: 61  LK 63
           L+
Sbjct: 603 LE 603

[Close]

BLAST of Chy11G203200 vs. TAIR 10
Match: AT4G10840.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 4.2e-09
Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 1   MGLACIQFYKIGEAVRLFQETKVVLEEHYGVYHSDTLAVSSNLAAATYDAMGSGKESLFF 60
           MGLAC+Q +KI EA  LF+E + +LE+  G    DTL V SNL AATYDAMG  ++++  
Sbjct: 480 MGLACVQLFKIDEAGELFEEARGILEQERGPCDQDTLGVYSNL-AATYDAMGRIEDAIEI 539

Query: 61  LKRFSK 67
           L++  K
Sbjct: 540 LEQVLK 544

[Close]

BLAST of Chy11G203200 vs. TAIR 10
Match: AT1G27500.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 9.4e-09
Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 1   MGLACIQFYKIGEAVRLFQETKVVLEEHYGVYHSDTLAVSSNLAAATYDAMG 53
           MGLACIQ   I EAV LF+E K +LE+  G YH +TL + SNLA A YDA+G
Sbjct: 533 MGLACIQLDAIEEAVELFEEAKCILEQECGPYHPETLGLYSNLAGA-YDAIG 583

The following BLAST results are available for this feature:

BLAST of Chy11G203200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L785	2.6e-27	87.32	Glycine--tRNA ligase, chloroplastic/mitochondrial 2 OS=Arabidopsis thaliana OX=3...	[more]
B5YES5	4.0e-20	61.97	Glycine--tRNA ligase alpha subunit OS=Dictyoglomus thermophilum (strain ATCC 359...	[more]
B8E0E9	2.0e-19	61.97	Glycine--tRNA ligase alpha subunit OS=Dictyoglomus turgidum (strain DSM 6724 / Z...	[more]
B7KHU5	9.8e-19	61.97	Glycine--tRNA ligase alpha subunit OS=Gloeothece citriformis (strain PCC 7424) O...	[more]
B2J0V5	2.8e-18	61.97	Glycine--tRNA ligase alpha subunit OS=Nostoc punctiforme (strain ATCC 29133 / PC...	[more]

BLAST of Chy11G203200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFM5	4.1e-121	95.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106730 PE=4 SV=1	[more]
A0A5D3DMK7	2.6e-115	89.08	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KA18	6.2e-109	86.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006750 PE=4 SV=1	[more]
A0A1S3CBB9	5.3e-68	57.96	uncharacterized protein LOC103498776 OS=Cucumis melo OX=3656 GN=LOC103498776 PE=...	[more]
A0A0A0LIF2	3.0e-63	54.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848840 PE=4 SV=1	[more]

BLAST of Chy11G203200 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646781.1	1.41e-163	97.12	hypothetical protein Csa_005116, partial [Cucumis sativus]	[more]
XP_031743834.1	1.62e-154	97.38	uncharacterized protein LOC105435987 [Cucumis sativus]	[more]
KAA0039744.1	3.53e-143	89.08	hypothetical protein E6C27_scaffold122G00040 [Cucumis melo var. makuwa] >TYK2475...	[more]
XP_004138491.3	1.31e-136	87.34	uncharacterized protein LOC101219791 [Cucumis sativus] >KGN45689.2 hypothetical ...	[more]
XP_038876014.1	3.75e-86	59.82	uncharacterized protein LOC120068348 [Benincasa hispida]	[more]

BLAST of Chy11G203200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48110.1	1.8e-28	87.32	glycine-tRNA ligases	[more]
AT2G45000.1	2.6e-14	76.60	structural constituent of nuclear pore	[more]
AT3G27960.1	7.7e-11	56.45	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G10840.1	4.2e-09	50.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G27500.1	9.4e-09	59.62	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002310	Glycine-tRNA ligase, alpha subunit	PRINTS	PR01044	TRNASYNTHGA	coord: 375..399 score: 28.0 coord: 401..421 score: 63.64
IPR002310	Glycine-tRNA ligase, alpha subunit	PFAM	PF02091	tRNA-synt_2e	coord: 391..462 e-value: 1.2E-25 score: 90.3
None	No IPR available	GENE3D	3.70.10.10		coord: 166..386 e-value: 6.0E-6 score: 27.7
None	No IPR available	GENE3D	3.30.930.10	Bira Bifunctional Protein; Domain 2	coord: 387..462 e-value: 5.9E-27 score: 96.1
None	No IPR available	PANTHER	PTHR46284:SF9	KINESIN LIGHT CHAIN-LIKE PROTEIN	coord: 1..140
None	No IPR available	PANTHER	PTHR46284	PROTEIN KINESIN LIGHT CHAIN-RELATED 3	coord: 1..140
None	No IPR available	SUPERFAMILY	55681	Class II aaRS and biotin synthetases	coord: 391..462
IPR007758	Nucleoporin, NSP1-like, C-terminal	PFAM	PF05064	Nsp1_C	coord: 94..135 e-value: 2.1E-6 score: 27.5
IPR006194	Glycine-tRNA synthetase, heterodimeric	PROSITE	PS50861	AA_TRNA_LIGASE_II_GLYAB	coord: 392..462 score: 19.609501

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G203200.1	Chy11G203200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006426	glycyl-tRNA aminoacylation
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004820	glycine-tRNA ligase activity
molecular_function	GO:0000166	nucleotide binding