Chy11G202890 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G202890
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Cyclin
Location	chrH11: 23532928 .. 23533837 (+)
RNA-Seq Expression	Chy11G202890
Synteny	Chy11G202890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCAAACTCCAATAATATCATTATTCCAATATCCCCAAGAAAGCTTCGATCTGATTTGTACTCTTACTCTTACAGTGAGGATTATTCTAAAATCCCATCAGTTATCAGTGTTGTTGCTTCTTTGATCGAGAGAAATATGGCCAGAAACCATCGTATTGCCAGAAACTACACGTCGTCTAAGGGTGCTGTTGTTTTCGATTGCCGTGACGAGGCCCCCGACATGTCCATTCAGTGTTATTTGGAGAGGATATTTCGTTACACCAAAGCTGCTCCTTCTGTCTACGTTGTTGCTTATGTTTATATTGATCGATTTTGCCAACAGAACCCTTCCTTCCGGATTACTCTTAGAAATGTTCATCGTCTTCTCATCACTACCGTCATGGTTGCTTCTAAATATGTCGAGGACATGTAAGTTTTCTCCTCTTTTCCAATAACTTTTTTATTCCATCTATAAGCTCTAATACTATATTACATAAACATAAAGATGGAAAGAATTATATGTTGAAAGAAACTAATGTGTTGTGTACGTTGTTCCAATTTAATTTTTTTTTTAAAATTTGTAATTAAGTAAGAGCTTTTTAAGTTATAATTGAGTGATGATTTAACAAAGTACTGTTTGGTTTGTTTTTGGGAACAGGAACTACAGAAACTCGTACTACGCAAGAGTCGGGGGATTGACAACAAAGGAAATGAACCAACTAGAGATGGATTTTTTGTTTCTAATGAGATTCAAATGCCATGTAAATCTAAGTGTTTTTGAGAGCTATTGTTGTCATTTAGAGAGAGAAGTTAGCATTGGCGGAGGATACCATATAGAAAGAACATTAAGATGTGCTGAAGAGTTGAAATCTAAACAAAACCAACAAACAACATATATTAATCAAATCGCTCGTATTATGTTGTAG

mRNA sequence

ATGGCCGCAAACTCCAATAATATCATTATTCCAATATCCCCAAGAAAGCTTCGATCTGATTTGTACTCTTACTCTTACAGTGAGGATTATTCTAAAATCCCATCAGTTATCAGTGTTGTTGCTTCTTTGATCGAGAGAAATATGGCCAGAAACCATCGTATTGCCAGAAACTACACGTCGTCTAAGGGTGCTGTTGTTTTCGATTGCCGTGACGAGGCCCCCGACATGTCCATTCAGTGTTATTTGGAGAGGATATTTCGTTACACCAAAGCTGCTCCTTCTGTCTACGTTGTTGCTTATGTTTATATTGATCGATTTTGCCAACAGAACCCTTCCTTCCGGATTACTCTTAGAAATGTTCATCGTCTTCTCATCACTACCGTCATGGTTGCTTCTAAATATGTCGAGGACATGAACTACAGAAACTCGTACTACGCAAGAGTCGGGGGATTGACAACAAAGGAAATGAACCAACTAGAGATGGATTTTTTGTTTCTAATGAGATTCAAATGCCATGTAAATCTAAGTGTTTTTGAGAGCTATTGTTGTCATTTAGAGAGAGAAGTTAGCATTGGCGGAGGATACCATATAGAAAGAACATTAAGATGTGCTGAAGAGTTGAAATCTAAACAAAACCAACAAACAACATATATTAATCAAATCGCTCGTATTATGTTGTAG

Coding sequence (CDS)

ATGGCCGCAAACTCCAATAATATCATTATTCCAATATCCCCAAGAAAGCTTCGATCTGATTTGTACTCTTACTCTTACAGTGAGGATTATTCTAAAATCCCATCAGTTATCAGTGTTGTTGCTTCTTTGATCGAGAGAAATATGGCCAGAAACCATCGTATTGCCAGAAACTACACGTCGTCTAAGGGTGCTGTTGTTTTCGATTGCCGTGACGAGGCCCCCGACATGTCCATTCAGTGTTATTTGGAGAGGATATTTCGTTACACCAAAGCTGCTCCTTCTGTCTACGTTGTTGCTTATGTTTATATTGATCGATTTTGCCAACAGAACCCTTCCTTCCGGATTACTCTTAGAAATGTTCATCGTCTTCTCATCACTACCGTCATGGTTGCTTCTAAATATGTCGAGGACATGAACTACAGAAACTCGTACTACGCAAGAGTCGGGGGATTGACAACAAAGGAAATGAACCAACTAGAGATGGATTTTTTGTTTCTAATGAGATTCAAATGCCATGTAAATCTAAGTGTTTTTGAGAGCTATTGTTGTCATTTAGAGAGAGAAGTTAGCATTGGCGGAGGATACCATATAGAAAGAACATTAAGATGTGCTGAAGAGTTGAAATCTAAACAAAACCAACAAACAACATATATTAATCAAATCGCTCGTATTATGTTGTAG

Protein sequence

MAANSNNIIIPISPRKLRSDLYSYSYSEDYSKIPSVISVVASLIERNMARNHRIARNYTSSKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNVHRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML*

Homology

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BLAST of Chy11G202890 vs. ExPASy Swiss-Prot
Match: Q9SHD3 (Cyclin-U2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU2-1 PE=1 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.2e-83
Identity = 155/220 (70.45%), Postives = 183/220 (83.18%), Query Frame = 0


Query: 10  IPISPRKLRSDLYSYSYSEDYSKIPSVISVVASLIERNMARNHRIARNYTSSKGAVVFDC 69
           + ISPRKLRSDLYSYSY +D + +P VISV++SLIER +ARN RI+R+Y       VFDC
Sbjct: 4   LAISPRKLRSDLYSYSYQDDSNTVPLVISVLSSLIERTLARNERISRSYGGFGKTRVFDC 63

Query: 70  RDEAPDMSIQCYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNVHRLLITTVM 129
           R E PDM+IQ YLERIFRYTKA PSVYVVAYVYIDRFCQ N  FRI+L NVHRLLITT+M
Sbjct: 64  R-EIPDMTIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQNNQGFRISLTNVHRLLITTIM 123

Query: 130 VASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYCCHLEREV 189
           +ASKYVEDMNY+NSY+A+VGGL T+++N LE++FLFLM FK HVN+SVFESYCCHLEREV
Sbjct: 124 IASKYVEDMNYKNSYFAKVGGLETEDLNNLELEFLFLMGFKLHVNVSVFESYCCHLEREV 183

Query: 190 SIGGGYHIERTLRCAEELKSKQNQQTT---YINQIARIML 227
           SIGGGY IE+ LRCAEE+KS+Q  Q     + +Q +RIML
Sbjct: 184 SIGGGYQIEKALRCAEEIKSRQIVQDPKHHHHHQFSRIML 222

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BLAST of Chy11G202890 vs. ExPASy Swiss-Prot
Match: Q9M205 (Cyclin-U2-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU2-2 PE=1 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 3.7e-80
Identity = 153/226 (67.70%), Postives = 184/226 (81.42%), Query Frame = 0


Query: 10  IPISPRKLRSDLYSYSYSEDYSKIPSVISVVASLIERNMARNHRIARNYTSSKGA----V 69
           + ISPRKLRSDLYSYSY ++ SK P VISV++SLI+R + RN RI+R    S GA     
Sbjct: 7   LTISPRKLRSDLYSYSY-QNNSKTPLVISVLSSLIDRTLTRNERISRRALPSSGAGGKTQ 66

Query: 70  VFDCRDEAPDMSIQCYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNVHRLLI 129
           +FDCR E PDM+IQ YL RIFRYTKA PSVYVVAYVYIDRFCQ NP FRI+L NVHRLLI
Sbjct: 67  IFDCR-EIPDMTIQSYLGRIFRYTKAGPSVYVVAYVYIDRFCQTNPGFRISLTNVHRLLI 126

Query: 130 TTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYCCHL 189
           TT+M+ASKYVED+NYRNSY+A+VGGL T+++N+LE++FLFLM FK HVN+SVFESYCCHL
Sbjct: 127 TTIMIASKYVEDLNYRNSYFAKVGGLETEDLNKLELEFLFLMGFKLHVNVSVFESYCCHL 186

Query: 190 EREVSIGGGYHIERTLRCAEELKSKQ-----NQQTTYINQIARIML 227
           EREVS GGGY IE+ LRCAEE+KS+Q      +   + +Q+ARI+L
Sbjct: 187 EREVSFGGGYQIEKALRCAEEIKSRQMIIQDPKHHHHHHQLARILL 230

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BLAST of Chy11G202890 vs. ExPASy Swiss-Prot
Match: Q7FAT5 (Cyclin-P2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP2-1 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 5.1e-45
Identity = 99/208 (47.60%), Postives = 140/208 (67.31%), Query Frame = 0


Query: 16  KLRSDLYSYSYSEDYS---KIPSVISVVASLIERNMARNHR---IARNYTSSKGAVVFDC 75
           +L SD+Y+    +D +     P V+SV+ASL+ER++ARN R    A +  +++ A  FD 
Sbjct: 5   ELASDVYALPCGDDGTTALSTPVVVSVLASLLERHIARNERDQAAAADGEAARRARAFD- 64

Query: 76  RDEAPDMSIQCYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNVHRLLITTVM 135
                DMS+  +LER  RY   +P VYVVAY Y+DR  ++    R+   N  RLL T ++
Sbjct: 65  SGTVLDMSLHAFLERFSRYANVSPQVYVVAYAYLDRL-RRGDGVRVVSANAQRLLTTAIL 124

Query: 136 VASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYCCHLEREV 195
           VASK+VED NY+NSY+A VGGLT  E++ LE+DFLFLM+F+ +V++SVF+SYC HLEREV
Sbjct: 125 VASKFVEDRNYKNSYFAAVGGLTAAELSSLELDFLFLMQFRLNVSVSVFQSYCRHLEREV 184

Query: 196 SIGGGYHIERTLR----CAEELKSKQNQ 214
           S GGGY +ER L+    C+ E +++Q Q
Sbjct: 185 SYGGGYQVERCLKKALVCSGEAQAQQRQ 210

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BLAST of Chy11G202890 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.8e-34
Identity = 76/164 (46.34%), Postives = 113/164 (68.90%), Query Frame = 0


Query: 28  EDYSKIPSVISVVASLIERNMARNHRIARNYTSSKGAVVFDCRDEAPDMSIQCYLERIFR 87
           E+ S +  +I+ ++SL+ER    N    R  T S+   VF      P ++IQ YLERIF+
Sbjct: 5   ENPSVMSKLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSR-PTITIQSYLERIFK 64

Query: 88  YTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNVHRLLITTVMVASKYVEDMNYRNSYYAR 147
           Y   +PS +VVAYVY+DRF  + PS  I   NVHRLLIT+VMVA+K+++D+ Y N+YYA+
Sbjct: 65  YANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAK 124

Query: 148 VGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYCCHLEREVSI 192
           VGG++TKEMN LE+DFLF + F+ +V  + F +Y  +L++E+++
Sbjct: 125 VGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTL 167

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BLAST of Chy11G202890 vs. ExPASy Swiss-Prot
Match: Q9LY16 (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.1e-34
Identity = 68/157 (43.31%), Postives = 111/157 (70.70%), Query Frame = 0


Query: 33  IPSVISVVASLIERNMARNHRIARNYTSSKGAVVFDCRDEAPDMSIQCYLERIFRYTKAA 92
           +P+VI+ ++SL++R    N  ++R +   K    F+   + P +SI+ Y+ERIF+Y   +
Sbjct: 20  MPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTK-PSISIRSYMERIFKYADCS 79

Query: 93  PSVYVVAYVYIDRFCQQNPSFRITLRNVHRLLITTVMVASKYVEDMNYRNSYYARVGGLT 152
            S Y+VAY+Y+DRF Q+ P   I   NVHRL+IT+V+V++K+++D+ Y N++YA+VGG+T
Sbjct: 80  DSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGIT 139

Query: 153 TKEMNQLEMDFLFLMRFKCHVNLSVFESYCCHLEREV 190
           T+EMN LE+DFLF + F+ +V +S +  YC  L+RE+
Sbjct: 140 TEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREM 175

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BLAST of Chy11G202890 vs. ExPASy TrEMBL
Match: A0A0A0KAQ9 (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_6G108560 PE=3 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 4.1e-122
Identity = 222/226 (98.23%), Postives = 224/226 (99.12%), Query Frame = 0


Query: 1   MAANSNNIIIPISPRKLRSDLYSYSYSEDYSKIPSVISVVASLIERNMARNHRIARNYTS 60
           MAANSNN+IIPISPRKLRSDLYSYS+SEDYSKIP VISVVASLIERNMARNHRIARNYTS
Sbjct: 1   MAANSNNMIIPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNYTS 60

Query: 61  SKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNV 120
           SKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAP VYVVAYVYIDRFCQQNPSFRITLRNV
Sbjct: 61  SKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNV 120

Query: 121 HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFES 180
           HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFES
Sbjct: 121 HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFES 180

Query: 181 YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 227
           YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML
Sbjct: 181 YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226

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BLAST of Chy11G202890 vs. ExPASy TrEMBL
Match: A0A1S3CAV0 (Cyclin OS=Cucumis melo OX=3656 GN=LOC103498771 PE=3 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 2.5e-119
Identity = 219/226 (96.90%), Postives = 222/226 (98.23%), Query Frame = 0


Query: 1   MAANSNNIIIPISPRKLRSDLYSYSYSEDYSKIPSVISVVASLIERNMARNHRIARNYTS 60
           MA +S+NIIIPISPRKLRSDLYSYSYSEDYSKIP VISVVASLIERNMARNHRIARNY S
Sbjct: 1   MANSSSNIIIPISPRKLRSDLYSYSYSEDYSKIPLVISVVASLIERNMARNHRIARNYMS 60

Query: 61  SKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNV 120
           SKGAVVFDCRDEAPDMSIQ YLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNV
Sbjct: 61  SKGAVVFDCRDEAPDMSIQRYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNV 120

Query: 121 HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFES 180
           HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLM+FKCHVNLSVFES
Sbjct: 121 HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMKFKCHVNLSVFES 180

Query: 181 YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 227
           YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML
Sbjct: 181 YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226

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BLAST of Chy11G202890 vs. ExPASy TrEMBL
Match: A0A6J1L2S6 (Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111499317 PE=3 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.1e-94
Identity = 183/222 (82.43%), Postives = 197/222 (88.74%), Query Frame = 0


Query: 10  IPISPRKLRSDLYSYSYSEDYSKIPSVISVVASLIERNMARNHRIARN-----YTSSKGA 69
           +PISPR LRSD+YSYSY E+ S  P VI VVASLIER+MARNHRIA+N       S   A
Sbjct: 3   LPISPRSLRSDVYSYSY-EEGSGTPLVIGVVASLIERSMARNHRIAKNCMSMPRDSRSRA 62

Query: 70  VVFDCRDEAPDMSIQCYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNVHRLL 129
           +VF+CR EAPDMSIQCYLERIFRYTK  PSVYVVAYVYIDRFCQQNP FRI+LRNVHRLL
Sbjct: 63  LVFECR-EAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRISLRNVHRLL 122

Query: 130 ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYCCH 189
           ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLE+DFLF+M FKCHVNLSVFESYCCH
Sbjct: 123 ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCH 182

Query: 190 LEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 227
           LEREVSIGGGYHIERTLRCAEELKSKQ+QQ ++ NQ+ARI L
Sbjct: 183 LEREVSIGGGYHIERTLRCAEELKSKQSQQASF-NQMARITL 221

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BLAST of Chy11G202890 vs. ExPASy TrEMBL
Match: A0A6J1DZT6 (Cyclin OS=Momordica charantia OX=3673 GN=LOC111025028 PE=3 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 9.2e-90
Identity = 179/223 (80.27%), Postives = 196/223 (87.89%), Query Frame = 0


Query: 12  ISPRKLRSDLYSYSYSEDYSKIPSVISVVASLIERNMARNHRIARNY-TSSK------GA 71
           ISPRKLRSDLYSYSY +D S+ P VI+V++SLIER+MARNHRI++NY T SK       A
Sbjct: 19  ISPRKLRSDLYSYSYGQD-SETPLVITVLSSLIERSMARNHRISKNYCTKSKWASRRHSA 78

Query: 72  VVFDCRDEAPDMSIQCYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNVHRLL 131
           +VFD   EAPDMSIQ YLERIF YT+A PSVYVVAYVYIDRFCQ NP FRITLRNVHRLL
Sbjct: 79  LVFD-SGEAPDMSIQSYLERIFCYTRAGPSVYVVAYVYIDRFCQLNPEFRITLRNVHRLL 138

Query: 132 ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYCCH 191
           ITT+MVASKYVEDMNYRNSY+ARVGGLT KEMNQLE+DFLF+M FKCHVN+SVFESYCCH
Sbjct: 139 ITTIMVASKYVEDMNYRNSYFARVGGLTRKEMNQLELDFLFMMGFKCHVNVSVFESYCCH 198

Query: 192 LEREVSIGGGYHIERTLRCAEEL-KSKQNQQTTYINQIARIML 227
           LEREVSIGGGYHIERTLRCAEEL  SKQNQQTT+ NQ+ RIML
Sbjct: 199 LEREVSIGGGYHIERTLRCAEELNNSKQNQQTTF-NQMPRIML 238

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BLAST of Chy11G202890 vs. ExPASy TrEMBL
Match: A0A6P4AKZ5 (Cyclin OS=Ziziphus jujuba OX=326968 GN=LOC107424218 PE=3 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 7.3e-87
Identity = 164/227 (72.25%), Postives = 191/227 (84.14%), Query Frame = 0


Query: 5   SNNIIIPISPRKLRSDLYSYSYSEDYSKIPSVISVVASLIERNMARNHRIARNYTS---- 64
           S +  + ISPRKLRSDLYSY+Y ++ S  P V++V+ASLIER+MARN RIA+N +S    
Sbjct: 4   STSTSLAISPRKLRSDLYSYAYGQEDSNTPLVVNVLASLIERSMARNQRIAKNCSSLYLS 63

Query: 65  -SKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRN 124
                 +FDC  E PDM+IQ YLERIFRYTKA PSVYVVAYVYIDRFCQ NP+FRI +RN
Sbjct: 64  RDLRTRIFDCH-ETPDMTIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQTNPAFRINIRN 123

Query: 125 VHRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFE 184
           VHRLLITT+MVASKYVEDMNYRNSY+ARVGGLTT ++N LE++FLFLM FK HVN+SVFE
Sbjct: 124 VHRLLITTIMVASKYVEDMNYRNSYFARVGGLTTDDLNNLELEFLFLMGFKLHVNVSVFE 183

Query: 185 SYCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 227
           SYCCHLEREVSIGGGYHIERTLRCAEE+KSK+N++  Y  QIAR+ML
Sbjct: 184 SYCCHLEREVSIGGGYHIERTLRCAEEIKSKRNEERRYNMQIARVML 229

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BLAST of Chy11G202890 vs. NCBI nr
Match: XP_004140492.1 (cyclin-U2-1 [Cucumis sativus] >KGN46558.1 hypothetical protein Csa_004772 [Cucumis sativus])

HSP 1 Score: 445 bits (1144), Expect = 2.03e-157
Identity = 222/226 (98.23%), Postives = 224/226 (99.12%), Query Frame = 0


Query: 1   MAANSNNIIIPISPRKLRSDLYSYSYSEDYSKIPSVISVVASLIERNMARNHRIARNYTS 60
           MAANSNN+IIPISPRKLRSDLYSYS+SEDYSKIP VISVVASLIERNMARNHRIARNYTS
Sbjct: 1   MAANSNNMIIPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNYTS 60

Query: 61  SKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNV 120
           SKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAP VYVVAYVYIDRFCQQNPSFRITLRNV
Sbjct: 61  SKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNV 120

Query: 121 HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFES 180
           HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFES
Sbjct: 121 HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFES 180

Query: 181 YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226
           YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML
Sbjct: 181 YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226

[Close]

BLAST of Chy11G202890 vs. NCBI nr
Match: XP_008459728.2 (PREDICTED: cyclin-U2-1 [Cucumis melo])

HSP 1 Score: 436 bits (1120), Expect = 9.28e-154
Identity = 219/226 (96.90%), Postives = 222/226 (98.23%), Query Frame = 0


Query: 1   MAANSNNIIIPISPRKLRSDLYSYSYSEDYSKIPSVISVVASLIERNMARNHRIARNYTS 60
           MA +S+NIIIPISPRKLRSDLYSYSYSEDYSKIP VISVVASLIERNMARNHRIARNY S
Sbjct: 1   MANSSSNIIIPISPRKLRSDLYSYSYSEDYSKIPLVISVVASLIERNMARNHRIARNYMS 60

Query: 61  SKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNV 120
           SKGAVVFDCRDEAPDMSIQ YLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNV
Sbjct: 61  SKGAVVFDCRDEAPDMSIQRYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNV 120

Query: 121 HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFES 180
           HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLM+FKCHVNLSVFES
Sbjct: 121 HRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMKFKCHVNLSVFES 180

Query: 181 YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226
           YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML
Sbjct: 181 YCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226

[Close]

BLAST of Chy11G202890 vs. NCBI nr
Match: XP_038875511.1 (cyclin-U2-1 [Benincasa hispida])

HSP 1 Score: 376 bits (966), Expect = 2.65e-130
Identity = 201/233 (86.27%), Postives = 211/233 (90.56%), Query Frame = 0


Query: 1   MAANSNNIIIPISPRKLRSDLYSYSYSEDYSKIPSVISVVASLIERNMARNHRIARNY-- 60
           MA +SN   IPISPRKLRSDLYSY+  ED SKIP VISVVASLIER+MARNHRIA+NY  
Sbjct: 1   MAKSSN---IPISPRKLRSDLYSYN--ED-SKIPLVISVVASLIERSMARNHRIAKNYMS 60

Query: 61  -----TSSKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSF 120
                +SS+  VVFDC  EAPDMSIQCYLERIFRYT+AAP VYVVAYVYIDRFCQQNPSF
Sbjct: 61  ICRDHSSSRAGVVFDCH-EAPDMSIQCYLERIFRYTRAAPCVYVVAYVYIDRFCQQNPSF 120

Query: 121 RITLRNVHRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHV 180
           RITLRNVHRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLE+DFLFLM FKCHV
Sbjct: 121 RITLRNVHRLLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEVDFLFLMGFKCHV 180

Query: 181 NLSVFESYCCHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226
           NLSVFESYCCHLEREVSIGGGYHIE+TLRCAEELKSKQNQQTTY NQ+ARIML
Sbjct: 181 NLSVFESYCCHLEREVSIGGGYHIEKTLRCAEELKSKQNQQTTY-NQMARIML 225

[Close]

BLAST of Chy11G202890 vs. NCBI nr
Match: KAG7013796.1 (Cyclin-U2-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 353 bits (905), Expect = 4.51e-121
Identity = 183/222 (82.43%), Postives = 196/222 (88.29%), Query Frame = 0


Query: 10  IPISPRKLRSDLYSYSYSEDYSKIPSVISVVASLIERNMARNHRIARNYTSS-----KGA 69
           +PISPR LRSD+YSYSY E+ S  P VI VVASLIER+MARNHRIA+N  S        A
Sbjct: 3   LPISPRSLRSDVYSYSY-EERSGTPLVIGVVASLIERSMARNHRIAKNCMSMPRDSRSRA 62

Query: 70  VVFDCRDEAPDMSIQCYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNVHRLL 129
           +VF+CR EAPDMSIQCYLERIFRYTK  PSVYVVAYVYIDRFCQQNP FRI LRNVHRLL
Sbjct: 63  LVFECR-EAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHRLL 122

Query: 130 ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYCCH 189
           ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLE+DFLF+M FKCHVNLSVFESYCCH
Sbjct: 123 ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCH 182

Query: 190 LEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226
           LEREVSIGGGYHIERTLRCAEELKSKQ+QQ ++ NQ+ARI L
Sbjct: 183 LEREVSIGGGYHIERTLRCAEELKSKQSQQASF-NQMARITL 221

[Close]

BLAST of Chy11G202890 vs. NCBI nr
Match: XP_023006659.1 (cyclin-U2-2 [Cucurbita maxima])

HSP 1 Score: 353 bits (905), Expect = 4.51e-121
Identity = 183/222 (82.43%), Postives = 196/222 (88.29%), Query Frame = 0


Query: 10  IPISPRKLRSDLYSYSYSEDYSKIPSVISVVASLIERNMARNHRIARNYTSS-----KGA 69
           +PISPR LRSD+YSYSY E  S  P VI VVASLIER+MARNHRIA+N  S        A
Sbjct: 3   LPISPRSLRSDVYSYSYEEG-SGTPLVIGVVASLIERSMARNHRIAKNCMSMPRDSRSRA 62

Query: 70  VVFDCRDEAPDMSIQCYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNVHRLL 129
           +VF+CR EAPDMSIQCYLERIFRYTK  PSVYVVAYVYIDRFCQQNP FRI+LRNVHRLL
Sbjct: 63  LVFECR-EAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRISLRNVHRLL 122

Query: 130 ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYCCH 189
           ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLE+DFLF+M FKCHVNLSVFESYCCH
Sbjct: 123 ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCH 182

Query: 190 LEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226
           LEREVSIGGGYHIERTLRCAEELKSKQ+QQ ++ NQ+ARI L
Sbjct: 183 LEREVSIGGGYHIERTLRCAEELKSKQSQQASF-NQMARITL 221

[Close]

BLAST of Chy11G202890 vs. TAIR 10
Match: AT2G45080.1 (cyclin p3;1 )

HSP 1 Score: 310.8 bits (795), Expect = 8.8e-85
Identity = 155/220 (70.45%), Postives = 183/220 (83.18%), Query Frame = 0


Query: 10  IPISPRKLRSDLYSYSYSEDYSKIPSVISVVASLIERNMARNHRIARNYTSSKGAVVFDC 69
           + ISPRKLRSDLYSYSY +D + +P VISV++SLIER +ARN RI+R+Y       VFDC
Sbjct: 4   LAISPRKLRSDLYSYSYQDDSNTVPLVISVLSSLIERTLARNERISRSYGGFGKTRVFDC 63

Query: 70  RDEAPDMSIQCYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNVHRLLITTVM 129
           R E PDM+IQ YLERIFRYTKA PSVYVVAYVYIDRFCQ N  FRI+L NVHRLLITT+M
Sbjct: 64  R-EIPDMTIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQNNQGFRISLTNVHRLLITTIM 123

Query: 130 VASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYCCHLEREV 189
           +ASKYVEDMNY+NSY+A+VGGL T+++N LE++FLFLM FK HVN+SVFESYCCHLEREV
Sbjct: 124 IASKYVEDMNYKNSYFAKVGGLETEDLNNLELEFLFLMGFKLHVNVSVFESYCCHLEREV 183

Query: 190 SIGGGYHIERTLRCAEELKSKQNQQTT---YINQIARIML 227
           SIGGGY IE+ LRCAEE+KS+Q  Q     + +Q +RIML
Sbjct: 184 SIGGGYQIEKALRCAEEIKSRQIVQDPKHHHHHQFSRIML 222

[Close]

BLAST of Chy11G202890 vs. TAIR 10
Match: AT3G60550.1 (cyclin p3;2 )

HSP 1 Score: 299.3 bits (765), Expect = 2.6e-81
Identity = 153/226 (67.70%), Postives = 184/226 (81.42%), Query Frame = 0


Query: 10  IPISPRKLRSDLYSYSYSEDYSKIPSVISVVASLIERNMARNHRIARNYTSSKGA----V 69
           + ISPRKLRSDLYSYSY ++ SK P VISV++SLI+R + RN RI+R    S GA     
Sbjct: 7   LTISPRKLRSDLYSYSY-QNNSKTPLVISVLSSLIDRTLTRNERISRRALPSSGAGGKTQ 66

Query: 70  VFDCRDEAPDMSIQCYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNVHRLLI 129
           +FDCR E PDM+IQ YL RIFRYTKA PSVYVVAYVYIDRFCQ NP FRI+L NVHRLLI
Sbjct: 67  IFDCR-EIPDMTIQSYLGRIFRYTKAGPSVYVVAYVYIDRFCQTNPGFRISLTNVHRLLI 126

Query: 130 TTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYCCHL 189
           TT+M+ASKYVED+NYRNSY+A+VGGL T+++N+LE++FLFLM FK HVN+SVFESYCCHL
Sbjct: 127 TTIMIASKYVEDLNYRNSYFAKVGGLETEDLNKLELEFLFLMGFKLHVNVSVFESYCCHL 186

Query: 190 EREVSIGGGYHIERTLRCAEELKSKQ-----NQQTTYINQIARIML 227
           EREVS GGGY IE+ LRCAEE+KS+Q      +   + +Q+ARI+L
Sbjct: 187 EREVSFGGGYQIEKALRCAEEIKSRQMIIQDPKHHHHHHQLARILL 230

[Close]

BLAST of Chy11G202890 vs. TAIR 10
Match: AT2G44740.1 (cyclin p4;1 )

HSP 1 Score: 147.5 bits (371), Expect = 1.3e-35
Identity = 76/164 (46.34%), Postives = 113/164 (68.90%), Query Frame = 0


Query: 28  EDYSKIPSVISVVASLIERNMARNHRIARNYTSSKGAVVFDCRDEAPDMSIQCYLERIFR 87
           E+ S +  +I+ ++SL+ER    N    R  T S+   VF      P ++IQ YLERIF+
Sbjct: 5   ENPSVMSKLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSR-PTITIQSYLERIFK 64

Query: 88  YTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNVHRLLITTVMVASKYVEDMNYRNSYYAR 147
           Y   +PS +VVAYVY+DRF  + PS  I   NVHRLLIT+VMVA+K+++D+ Y N+YYA+
Sbjct: 65  YANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAK 124

Query: 148 VGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYCCHLEREVSI 192
           VGG++TKEMN LE+DFLF + F+ +V  + F +Y  +L++E+++
Sbjct: 125 VGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTL 167

[Close]

BLAST of Chy11G202890 vs. TAIR 10
Match: AT5G07450.1 (cyclin p4;3 )

HSP 1 Score: 146.7 bits (369), Expect = 2.2e-35
Identity = 68/157 (43.31%), Postives = 111/157 (70.70%), Query Frame = 0


Query: 33  IPSVISVVASLIERNMARNHRIARNYTSSKGAVVFDCRDEAPDMSIQCYLERIFRYTKAA 92
           +P+VI+ ++SL++R    N  ++R +   K    F+   + P +SI+ Y+ERIF+Y   +
Sbjct: 20  MPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTK-PSISIRSYMERIFKYADCS 79

Query: 93  PSVYVVAYVYIDRFCQQNPSFRITLRNVHRLLITTVMVASKYVEDMNYRNSYYARVGGLT 152
            S Y+VAY+Y+DRF Q+ P   I   NVHRL+IT+V+V++K+++D+ Y N++YA+VGG+T
Sbjct: 80  DSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGIT 139

Query: 153 TKEMNQLEMDFLFLMRFKCHVNLSVFESYCCHLEREV 190
           T+EMN LE+DFLF + F+ +V +S +  YC  L+RE+
Sbjct: 140 TEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREM 175

[Close]

BLAST of Chy11G202890 vs. TAIR 10
Match: AT3G21870.1 (cyclin p2;1 )

HSP 1 Score: 145.6 bits (366), Expect = 4.9e-35
Identity = 66/158 (41.77%), Postives = 110/158 (69.62%), Query Frame = 0


Query: 34  PSVISVVASLIERNMARNHRIARNYTSSKGAVVFDCRDEAPDMSIQCYLERIFRYTKAAP 93
           P V+++++ ++E+ +ARN  +A+       ++       AP +SI  YLERI++YTK +P
Sbjct: 25  PRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSP 84

Query: 94  SVYVVAYVYIDRFCQQNPSFRITLRNVHRLLITTVMVASKYVEDMNYRNSYYARVGGLTT 153
           + +VV YVYIDR   ++P   +   NVHRLL+T VM+A+K ++D++Y N +YARVGG++ 
Sbjct: 85  ACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSN 144

Query: 154 KEMNQLEMDFLFLMRFKCHVNLSVFESYCCHLEREVSI 192
            ++N++E++ LFL+ F+  V+  VFESYC HLE+E+ +
Sbjct: 145 ADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQL 182

The following BLAST results are available for this feature:

BLAST of Chy11G202890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHD3	1.2e-83	70.45	Cyclin-U2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU2-1 PE=1 SV=1	[more]
Q9M205	3.7e-80	67.70	Cyclin-U2-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU2-2 PE=1 SV=1	[more]
Q7FAT5	5.1e-45	47.60	Cyclin-P2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP2-1 PE=2 SV=1	[more]
O80513	1.8e-34	46.34	Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1	[more]
Q9LY16	3.1e-34	43.31	Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1	[more]

BLAST of Chy11G202890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAQ9	4.1e-122	98.23	Cyclin OS=Cucumis sativus OX=3659 GN=Csa_6G108560 PE=3 SV=1	[more]
A0A1S3CAV0	2.5e-119	96.90	Cyclin OS=Cucumis melo OX=3656 GN=LOC103498771 PE=3 SV=1	[more]
A0A6J1L2S6	2.1e-94	82.43	Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111499317 PE=3 SV=1	[more]
A0A6J1DZT6	9.2e-90	80.27	Cyclin OS=Momordica charantia OX=3673 GN=LOC111025028 PE=3 SV=1	[more]
A0A6P4AKZ5	7.3e-87	72.25	Cyclin OS=Ziziphus jujuba OX=326968 GN=LOC107424218 PE=3 SV=1	[more]

BLAST of Chy11G202890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140492.1	2.03e-157	98.23	cyclin-U2-1 [Cucumis sativus] >KGN46558.1 hypothetical protein Csa_004772 [Cucum...	[more]
XP_008459728.2	9.28e-154	96.90	PREDICTED: cyclin-U2-1 [Cucumis melo]	[more]
XP_038875511.1	2.65e-130	86.27	cyclin-U2-1 [Benincasa hispida]	[more]
KAG7013796.1	4.51e-121	82.43	Cyclin-U2-2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023006659.1	4.51e-121	82.43	cyclin-U2-2 [Cucurbita maxima]	[more]

BLAST of Chy11G202890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45080.1	8.8e-85	70.45	cyclin p3;1	[more]
AT3G60550.1	2.6e-81	67.70	cyclin p3;2	[more]
AT2G44740.1	1.3e-35	46.34	cyclin p4;1	[more]
AT5G07450.1	2.2e-35	43.31	cyclin p4;3	[more]
AT3G21870.1	4.9e-35	41.77	cyclin p2;1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012389	Cyclin P/U	PIRSF	PIRSF027110	PREG	coord: 13..223 e-value: 5.6E-67 score: 223.5
IPR013922	Cyclin PHO80-like	PFAM	PF08613	Cyclin	coord: 62..170 e-value: 2.9E-31 score: 109.0
None	No IPR available	GENE3D	1.10.472.10		coord: 26..225 e-value: 2.3E-49 score: 169.8
None	No IPR available	PANTHER	PTHR15615	UNCHARACTERIZED	coord: 11..225
None	No IPR available	PANTHER	PTHR15615:SF15	CYCLIN-U2-1	coord: 11..225
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 52..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G202890.1	Chy11G202890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
molecular_function	GO:0019901	protein kinase binding