Chy11G202380 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCGCAGGCTGATTACATGGAGAAAATGCAACTTCGTCAGAATTACAGAAATTTCTGGCATACTAATCTCACGGGCACCATTGCTGCCAGTCCACCTTGTATGTGTTTGTTATTTTTTGTTTGATTGCTTAGATTTTTGGGATGAATCAATTATGAGATAAGAATGTTGGGAAATGTGGGTTTGTCGTTGATTCTTTAGTTGGGTTTTCTTTGTCTGTTTTATTCAAGAGATCGGGCAAAAGTTACGTAAATCGAATCACGTTGATTTTGGGTGAAATGACCGTTCAGATTTCTCTGGCTCTGTTCCTTTTCCATATGATTAAAAATGGCGCGGCTGATGCTTCATTTGCTAACAGGGTGTTCTTTGTTTGAGGGCTTTTCTTATTAGAATACTCATTTGTTCTTGTTAAATATCTTGATCTTGCCTGGCCAAGGAAATGCATATTGGTTTATTTTAGTTTCACTGTATTAAATTTCAGCATTACTCAATTTTCTCACCAACCATACAGGGAGTTCACCTTTTTTCCATATTCTTGTGTATGATCCCAAACATTAACGTTACTTTTATTCATTCTGTTTTGCAGATTGTTGCTTTTCTGTATTCTGGTAATGTGTTTGTTCTCTGATGAGTTCTCTGTCATAATTTCAATTTCAGTGATTGAAAAGCTTTGTTAAGTTTATGGCTGTGTGTGTTCTTAATTCTATAGTGCAATGAAATATTCTGCTACTTACCTGTACGTGATAAACAAAACTGAGAGGCTGTCTAAGGCAGTTACTTCTAACATTCATGGCAGTAAAATTGTGTTTGTTTAACTTTTCGAGTGTTTAATTTTGATAAAAAAAATCATTTTGAAAAAATTGGAGTGTTTGGCAACCACTCAATGTAATTTTTGAAACACTCTCAGAGCTTATTTTAAATCATTTCTATCAAAAAGTTTAAATAAAAAAGAGTTCTTTAAAAAACGTTTTTTTTTTCTTTAATCAATCCAAAGGGCCAAGTATGTGTTACCTTTATGTATAGTGTTTAAAATGGCATTGGTTTCTACTTTGATATGGTTTTTCTTCTAACTATTTTTTTATTTTGTGAAAAGCTCCCCATGTGTTTCTTACCTTCTGCGCAAACGAGCTCTTTACGATGATATGTCGAGGTATTTTCGACGAACTTTGTAATTTTACTAGAAAGATAAAGTTTGTATCACGTCTGATCTTTTTGATTTACCTATCATAGATACACATGCTGTGGTGGCTACATGCCTTGCAGCGGCAAGTGTGGAGAAAAGCACTGCCCTGAAGCTTGTCTTTGCACTGAGGTATGGCTGTCGAGCGAGGACCATTATCTCCTTTGAGCCCTCTAGTTATCTCTCTCTATACAGATTCTTCTATGTGATCTAATTTAAAGCATTCTGTGTTTTGGTTTTGTACTCTATTTAGGTTTTCTGTTGCTTTGCTAATTCAGTTGCATCAACACGTTTCATGTTGCAAGACGAGTTCAATATACAGACAACAGAGTGTGATAACTGCATCATTGTACCGTCTTTTCTCTCATTTATTCATTAAATTGCTCGTACCAAGCTCTTTTCTCCCTTTAACAACTTGGCCTTTACTTTGCAGGGCTTTATGTTGTGCCTCTCACAACTGGCTTGCATATGCTCCATAATTGCTTGCTTGATTGGAAGTGAAGAACTTCAAGAGGCCTCAGATTTAATTACCTGTTTATCTAATCTTGTATACTGCTCGTAAGGGGTTGCATTTCAATCTTCTTAATCCATAATAACATGAAAGTTCTTTTTATATTTTGAACTTATATTTTTATTTATGTATTTGTTTCCTTTCTCTTGCAGTGTCTGTGCATGTATGCAGGTACGTTCGAACTTTAAAAATCTTACAACTTAATGACATCCTATGTTTGTTAATTTACCTCGCAAGATACAGAAATCTAAGTTATGTTTATTTAGACTACAAAACTTACCTTTTTAGTTTTTTTACTTCACACCAACTTTTATACGTCACAAACACAGGAGCGCGTTACACGAACCCAAGATTTCTAAATCGCTTGCTTCACCATTATTTAAATATAGATTACACAAATTTGGACTAACTATGAATCAAACCTCCCTTCAAGAAGTTACTCATAACACTTTCTTCAAATATATATATATATATATATCATTGAGTTAAAAAGTTGTCCTTATGGCTGTTATATAGATGTGCTTATCCTAGGTGCTATTAGGTTTTGTTAACCTTATGAACCACATAAAAACATGTTTATGAAATTTTCTTTTTGTACAACATATTACAAGTTGTAATCCATAAACCAAAACCCAAAAGTACTTTTTTTTTTCTTGAAACATAATTCATTGCTCTAATGATTTTCTTGTATATATTTCTGTTTTAGTTTGTTATACTTGAATTCTCTTTCTAAAGCAGCATGTATGATTTTCTGATGGTGTTAATTATGGAGAACTGCAGACACAACACAAGCTTGAGTTGGATAAAAGAGATGGCAAGTTTGGACCTCAATTACCATCCATGGCTGTGCCTCTCACACAGCAAATGTCTCGTATCGATCAGCCTATTCCTGCCCCTGTTGGTGGATATTCTCCTCCTCCGGTATATGGACAACCATTCGGGCACCTACCCCCTCCTGTTGTTCAAGGCTACCCACCGCAGCCACCACCAACACCCCCTCACCTGGCTCAAGGCTACCCCCACCCTACTCCATTTCAAGGCTATCCACCATCCGGTTATCCTCAGCATCCGCCTCCGGGCCAATACAAGTGA ATGGCGTCGCAGGCTGATTACATGGAGAAAATGCAACTTCGTCAGAATTACAGAAATTTCTGGCATACTAATCTCACGGGCACCATTGCTGCCAGTCCACCTTATTGTTGCTTTTCTGTATTCTGCTCCCCATGTGTTTCTTACCTTCTGCGCAAACGAGCTCTTTACGATGATATGTCGAGATACACATGCTGTGGTGGCTACATGCCTTGCAGCGGCAAGTGTGGAGAAAAGCACTGCCCTGAAGCTTGTCTTTGCACTGAGGTTTTCTGTTGCTTTGCTAATTCAGTTGCATCAACACGTTTCATGTTGCAAGACGAGTTCAATATACAGACAACAGAGTGTGATAACTGCATCATTGGCTTTATGTTGTGCCTCTCACAACTGGCTTGCATATGCTCCATAATTGCTTGCTTGATTGGAAGTGAAGAACTTCAAGAGGCCTCAGATTTAATTACCTGTTTATCTAATCTTGTATACTGCTCTGTCTGTGCATGTATGCAGACACAACACAAGCTTGAGTTGGATAAAAGAGATGGCAAGTTTGGACCTCAATTACCATCCATGGCTGTGCCTCTCACACAGCAAATGTCTCGTATCGATCAGCCTATTCCTGCCCCTGTTGGTGGATATTCTCCTCCTCCGGTATATGGACAACCATTCGGGCACCTACCCCCTCCTGTTGTTCAAGGCTACCCACCGCAGCCACCACCAACACCCCCTCACCTGGCTCAAGGCTACCCCCACCCTACTCCATTTCAAGGCTATCCACCATCCGGTTATCCTCAGCATCCGCCTCCGGGCCAATACAAGTGA ATGGCGTCGCAGGCTGATTACATGGAGAAAATGCAACTTCGTCAGAATTACAGAAATTTCTGGCATACTAATCTCACGGGCACCATTGCTGCCAGTCCACCTTATTGTTGCTTTTCTGTATTCTGCTCCCCATGTGTTTCTTACCTTCTGCGCAAACGAGCTCTTTACGATGATATGTCGAGATACACATGCTGTGGTGGCTACATGCCTTGCAGCGGCAAGTGTGGAGAAAAGCACTGCCCTGAAGCTTGTCTTTGCACTGAGGTTTTCTGTTGCTTTGCTAATTCAGTTGCATCAACACGTTTCATGTTGCAAGACGAGTTCAATATACAGACAACAGAGTGTGATAACTGCATCATTGGCTTTATGTTGTGCCTCTCACAACTGGCTTGCATATGCTCCATAATTGCTTGCTTGATTGGAAGTGAAGAACTTCAAGAGGCCTCAGATTTAATTACCTGTTTATCTAATCTTGTATACTGCTCTGTCTGTGCATGTATGCAGACACAACACAAGCTTGAGTTGGATAAAAGAGATGGCAAGTTTGGACCTCAATTACCATCCATGGCTGTGCCTCTCACACAGCAAATGTCTCGTATCGATCAGCCTATTCCTGCCCCTGTTGGTGGATATTCTCCTCCTCCGGTATATGGACAACCATTCGGGCACCTACCCCCTCCTGTTGTTCAAGGCTACCCACCGCAGCCACCACCAACACCCCCTCACCTGGCTCAAGGCTACCCCCACCCTACTCCATTTCAAGGCTATCCACCATCCGGTTATCCTCAGCATCCGCCTCCGGGCCAATACAAGTGA MASQADYMEKMQLRQNYRNFWHTNLTGTIAASPPYCCFSVFCSPCVSYLLRKRALYDDMSRYTCCGGYMPCSGKCGEKHCPEACLCTEVFCCFANSVASTRFMLQDEFNIQTTECDNCIIGFMLCLSQLACICSIIACLIGSEELQEASDLITCLSNLVYCSVCACMQTQHKLELDKRDGKFGPQLPSMAVPLTQQMSRIDQPIPAPVGGYSPPPVYGQPFGHLPPPVVQGYPPQPPPTPPHLAQGYPHPTPFQGYPPSGYPQHPPPGQYK* Homology
BLAST of Chy11G202380 vs. ExPASy TrEMBL
Match: A0A0A0KBB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006690 PE=4 SV=1) HSP 1 Score: 541.2 bits (1393), Expect = 2.5e-150 Identity = 256/271 (94.46%), Postives = 262/271 (96.68%), Query Frame = 0
BLAST of Chy11G202380 vs. ExPASy TrEMBL
Match: A0A5D3BTP0 (Survival motor neuron protein-like isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001280 PE=4 SV=1) HSP 1 Score: 501.5 bits (1290), Expect = 2.2e-138 Identity = 241/272 (88.60%), Postives = 248/272 (91.18%), Query Frame = 0
BLAST of Chy11G202380 vs. ExPASy TrEMBL
Match: A0A1S3C791 (survival motor neuron protein-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103497697 PE=4 SV=1) HSP 1 Score: 501.5 bits (1290), Expect = 2.2e-138 Identity = 241/272 (88.60%), Postives = 248/272 (91.18%), Query Frame = 0
BLAST of Chy11G202380 vs. ExPASy TrEMBL
Match: A0A6J1HHP6 (leucine-rich repeat extensin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111464171 PE=4 SV=1) HSP 1 Score: 460.7 bits (1184), Expect = 4.3e-126 Identity = 230/284 (80.99%), Postives = 244/284 (85.92%), Query Frame = 0
BLAST of Chy11G202380 vs. ExPASy TrEMBL
Match: A0A6J1KKE2 (leucine-rich repeat extensin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111494826 PE=4 SV=1) HSP 1 Score: 459.5 bits (1181), Expect = 9.5e-126 Identity = 228/276 (82.61%), Postives = 242/276 (87.68%), Query Frame = 0
BLAST of Chy11G202380 vs. NCBI nr
Match: XP_004138581.1 (uncharacterized protein LOC101221132 [Cucumis sativus] >KGN45682.1 hypothetical protein Csa_005223 [Cucumis sativus]) HSP 1 Score: 539 bits (1388), Expect = 4.13e-193 Identity = 256/271 (94.46%), Postives = 262/271 (96.68%), Query Frame = 0
BLAST of Chy11G202380 vs. NCBI nr
Match: XP_008458185.1 (PREDICTED: survival motor neuron protein-like isoform X4 [Cucumis melo] >TYK03033.1 survival motor neuron protein-like isoform X4 [Cucumis melo var. makuwa]) HSP 1 Score: 499 bits (1285), Expect = 2.15e-177 Identity = 241/272 (88.60%), Postives = 248/272 (91.18%), Query Frame = 0
BLAST of Chy11G202380 vs. NCBI nr
Match: XP_038875430.1 (uncharacterized protein LOC120067891 isoform X1 [Benincasa hispida] >XP_038875431.1 uncharacterized protein LOC120067891 isoform X1 [Benincasa hispida]) HSP 1 Score: 481 bits (1237), Expect = 3.57e-170 Identity = 234/271 (86.35%), Postives = 244/271 (90.04%), Query Frame = 0
BLAST of Chy11G202380 vs. NCBI nr
Match: KAG6593658.1 (hypothetical protein SDJN03_13134, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 462 bits (1188), Expect = 4.60e-162 Identity = 230/276 (83.33%), Postives = 244/276 (88.41%), Query Frame = 0
BLAST of Chy11G202380 vs. NCBI nr
Match: XP_022964021.1 (leucine-rich repeat extensin-like protein 2 [Cucurbita moschata]) HSP 1 Score: 458 bits (1179), Expect = 1.49e-160 Identity = 230/284 (80.99%), Postives = 244/284 (85.92%), Query Frame = 0
BLAST of Chy11G202380 vs. TAIR 10
Match: AT4G23470.1 (PLAC8 family protein ) HSP 1 Score: 349.4 bits (895), Expect = 2.7e-96 Identity = 172/263 (65.40%), Postives = 199/263 (75.67%), Query Frame = 0
BLAST of Chy11G202380 vs. TAIR 10
Match: AT5G41390.1 (PLAC8 family protein ) HSP 1 Score: 342.0 bits (876), Expect = 4.3e-94 Identity = 175/268 (65.30%), Postives = 204/268 (76.12%), Query Frame = 0
BLAST of Chy11G202380 vs. TAIR 10
Match: AT1G63830.2 (PLAC8 family protein ) HSP 1 Score: 339.0 bits (868), Expect = 3.6e-93 Identity = 163/264 (61.74%), Postives = 193/264 (73.11%), Query Frame = 0
BLAST of Chy11G202380 vs. TAIR 10
Match: AT1G63830.1 (PLAC8 family protein ) HSP 1 Score: 339.0 bits (868), Expect = 3.6e-93 Identity = 163/264 (61.74%), Postives = 193/264 (73.11%), Query Frame = 0
BLAST of Chy11G202380 vs. TAIR 10
Match: AT1G63830.3 (PLAC8 family protein ) HSP 1 Score: 339.0 bits (868), Expect = 3.6e-93 Identity = 163/264 (61.74%), Postives = 193/264 (73.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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