Chy11G202060 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G202060
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	LINE-1 retrotransposable element ORF2 protein
Location	chrH11: 22778828 .. 22782515 (-)
RNA-Seq Expression	Chy11G202060
Synteny	Chy11G202060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCGTCTTCATACTCGACGAAATCCACAGCTTCGTCGATGCCGTCTCCATCCTCGCCGGCCTTGGCTACGTATTCAATCTCAAATTCTCACCAGAAATGTTCTCAATAATGGCCAACCCCACACCTTCCCCTTCTTGTACCATAGCCCTGCAACTATTTCCTCCATTCTTCAATCAACAATATTCCTGCCAACAACTTCACTACTCATGGATTTACATCAACCATTTTTTCCCCGAAATGTTCGATTTGGAACGAACCGGTTTTTCTTCGCTCACATTCTCTTTTGCAGATTCGCATCATGCCGACCTCACATTTTGCAGTCGTGATGGTTAGTTTAATTTTTCTTATAATATATATATATATGTTTGTTCTTGGAAGTTCTCTGTCAATATATATTCAAATTTTTAGGCCGTTTTCGAGAGATTGATTTCCCAATGTATCATTCGGACGAGTTGATGGATGTCAGTGATCAGTTGGATTGGGAAACTTTCGTCTCCTTCAGTTCACAAGAGTTTATTAACATTGTAACGTTGAATAATTTTGATTCTGGTAAACAATTCTCCCCTTCTTCTATTTCCACATATATATATATATATATATACACATATATATTATTTTGAAAGAAACTAGTGTTTATGGTGTTGAGTTTGTAAAAGTTTTGTTGTTATATTTCACATACAGTTTTAGTCACAATAACGAATTCACAAGTCAAATTCTCTTATGCTGGGACACATATGATGCTTACTCGAGAGGTATTAATTACACCCTTTTGAATATATAAAGGGTTGTTTCTAAAGCTGTCATAAAATTAATTTAATAATTAATAACAATATATAAACATCAGTTCCATAATTGATTCAAGATATTGATATTTCTGTATCTTTATGATATATATTAACGACAGTGAAAATATGTCAATAAAACATATATTTTTTTACTGTCAAAAATCTCTTGAAAATCATAATTATATATTATAAGTTATCAAATGTAACGATACCTATTTGCTATCACAAAAGTTCACATTTATTTACATTGTCAACTAAATAAATCTCACAATGTTTTGTTAAATGTCAAAGAAATCATGCTTATTTAAGTATAATTAGTATATGTTTCATGTAGGGAGTTCTATAAATTATTATCATATTAGGAAAAAGAAGTTAGTAGGTCTAAAATTGGTCTTTTGTATTGGAAAGTACATTGGGGAGAATTAAGAAAGGGTATTGGAATATTAGTTTTTAATTTGTGTTTATGCCAAACTTCTAGTGTACCGACTGATCTAATTCAACGTATCTTTTTTCTTTTTGAAAAAAAATTATGACTATGCAGAGAAGACGATGCATTATTGGTGGAGTTGGAGTAAGTAATGAAATTGACTTTGTAGTAAATTTGAAAGCAAAGGAAAGTTTACGTAGATTGGCAAGTAGATCAAAAAGGGTTTGGTTATTCAAGTCAAAAAATTCGTCCAAAGGTGCAATATGTGTCCCTCTTGGTTTGTATGCTCGATTTTTGGTTTCTTTTTCTAATTAGTGCACATCATATACAAAATGTTCTCTACTACTCTACATTGATATATATATATATATATATATGCTAATTAATACACTTGTCAAATTATATTGAAGTGTTCTTTTTTTTAAAAAGTAGAGTGAATGAATGGACAAATTTATTTTTGATAAGCAGAAATAAAAAAATAGAATTTGAAGGACTAAAAACTTGGTTTTTTTTTTTTTCTTGTTATTTGTTTAGGAGATTTATTTTTTAGAAAAGAGAAATAGTTTGGGTCAGTTTTATTTAGATAATCTTTGAAAAAACGTTTTAAATTATGTTATTCGCTTATATAATTATATAAAAGCTTATTGTAATTTTATAATTAATCTTACTTAATTGAAATATTAGATGATCATCATATATTTTATGTAAAACTTTTGAAATTAATTTTGAGTTTAATAAGTCACCTAACGACACCATATTCATTGGTTTTCAATTTTGTATACAAAAGGTTTCAACCTATTAAAAGTTTTTAAAGTATTTAATTTAATAAATAATAGATAGTGCATTGATTTTTTAAATAACATATAAGACTTATATAACGTCTATGGTATATAAACTTTAAACCATAAGAATCTATCACATTAATACACAATAAAAAATTTAAAAGTTTGAAAGATGTTGCAATATAGCGACCTATATTCTCAATAGTTCTAATTGGAGTCATTACTGGTATGCATGGAGTTTTGAAACAAAGACCACGTAACCATATAAACTAAAAATAAAGATTCTTCTAAATAAATAAAATTTCATTAGAATAATCTAAAGATTTCTTAAACAAAGTTTAGTTCGGTTCCCTAAAGCATTCATAACCAATAGATAAAACATTTAAAAAATTAAAATCATTAAACTCGACGGTTCTTTTCAAAACCAAAAATTCATAACAATCTAAAAACAACGACTCTTCTAAGCAAAAAACTGCATGAAAACCGTTTTACAGAACAAAATAGTATAAATAAAGGTCCAAAAGCCAAGTTTGGAATCACTATAACTCCTTGAAATCTGAAAGAATCAGTACTACTAACCCCCTCTTTCCTCAAAAATGCTCTACTTCAAGTGCCCATATCTTCCAATTGAACAAGCTTTATTCACCCTAAGCAGAATCAATGAAAATGGGTATTTCAAAAGCTATCCAAACCTGTTGATTTTCTCTACAAGTTACGCAGATTTCCCACTCACCTTAGTAACCCTACAAATGTTGCCTCAATTCTTCACCCAATACAATTGCAATACCCTTTATCACTACAACATCCATATTGATCATCTTTACAGACTCTTTAAAACTGCAAGAACCAAGATGTTATTCCAATCCTTTGACTTCAATCTTATTGATGGTCGCAAATCAAAGAAAGAAGGTGTCATTACCTTTTTCAGTTAAGTACTGTGTTTTGTGATCCCCATTCTACTTATTATTTCTTTTCTTTAACTTCTTAACTTATTTATTTCAAGATTAATATATAATTACCTTTTGATTATTTATTTCATGCTTTAGGTGATAAGAGAGATTCCTTAATGTCAAATGTACGTACATTAGATAAACTTCCTCTTGATACGCAAAAGATTCCCTCAATTCAATATGATGCATTCTTCACTATGGAAACAGAACTATTCAAAACCCTTATACGTGATTTAAATGATCATACAGGTAAAATTTTTTGTTTTCTTCTTCTTCTTCTTTTGTTTCTTTATTCTAAATAATTGATTCTTTAATTTGTTGAATTTATTTATAATATCAGCTAGGGTTACTGTAGCACGTTCATCTGTGAGATTCACTTCCAGTAAATTGTTGAACATTGGATTTACTAAACAAGTATGTTTTTCTTTTTCTTTTTCCATTGAAATGAAGTTCTTAAATTTGTAAATTAAATTGAAACTAATCTAATTAAAAATATTCTAACTTCTATTGATTAAGTTGTTAGGTATTTTGTGGTTAATTTTGCAGTCTGGGAATTGCATAATCGGAGGCATTAAAAAAGTGAAAGATGAAATGAAATTTACACTCACTTTCAGGCCAGTTCCGTTCTTCGATAGCTTCTCAACAAAAAGGGTTTGGTTCTTTAGACCAAGTTTGAGTAATTGCATGGCAATGGTTTCTCCTGTTAATCTTCATGCTGAAATTACTTCCTACTTTGTCTAA

mRNA sequence

ATGTTCGTCTTCATACTCGACGAAATCCACAGCTTCGTCGATGCCGTCTCCATCCTCGCCGGCCTTGGCTACGTATTCAATCTCAAATTCTCACCAGAAATGTTCTCAATAATGGCCAACCCCACACCTTCCCCTTCTTGTACCATAGCCCTGCAACTATTTCCTCCATTCTTCAATCAACAATATTCCTGCCAACAACTTCACTACTCATGGATTTACATCAACCATTTTTTCCCCGAAATGTTCGATTTGGAACGAACCGGTTTTTCTTCGCTCACATTCTCTTTTGCAGATTCGCATCATGCCGACCTCACATTTTGCAGTCGTGATGGCCGTTTTCGAGAGATTGATTTCCCAATGTATCATTCGGACGAGTTGATGGATGTCAGTGATCAGTTGGATTGGGAAACTTTCGTCTCCTTCAGTTCACAAGAGTTTATTAACATTGTAACGTTGAATAATTTTGATTCTGTTTTAGTCACAATAACGAATTCACAAGTCAAATTCTCTTATGCTGGGACACATATGATGCTTACTCGAGAGAGAAGACGATGCATTATTGGTGGAGTTGGAGTAAGTAATGAAATTGACTTTGTAGTAAATTTGAAAGCAAAGGAAAGTTTACGTAGATTGGCAAGTGATAAGAGAGATTCCTTAATGTCAAATGTACGTACATTAGATAAACTTCCTCTTGATACGCAAAAGATTCCCTCAATTCAATATGATGCATTCTTCACTATGGAAACAGAACTATTCAAAACCCTTATACGTGATTTAAATGATCATACAGCTAGGGTTACTGTAGCACGTTCATCTGTGAGATTCACTTCCAGTAAATTGTTGAACATTGGATTTACTAAACAATCTGGGAATTGCATAATCGGAGGCATTAAAAAAGTGAAAGATGAAATGAAATTTACACTCACTTTCAGGCCAGTTCCGTTCTTCGATAGCTTCTCAACAAAAAGGGTTTGGTTCTTTAGACCAAGTTTGAGTAATTGCATGGCAATGGTTTCTCCTGTTAATCTTCATGCTGAAATTACTTCCTACTTTGTCTAA

Coding sequence (CDS)

ATGTTCGTCTTCATACTCGACGAAATCCACAGCTTCGTCGATGCCGTCTCCATCCTCGCCGGCCTTGGCTACGTATTCAATCTCAAATTCTCACCAGAAATGTTCTCAATAATGGCCAACCCCACACCTTCCCCTTCTTGTACCATAGCCCTGCAACTATTTCCTCCATTCTTCAATCAACAATATTCCTGCCAACAACTTCACTACTCATGGATTTACATCAACCATTTTTTCCCCGAAATGTTCGATTTGGAACGAACCGGTTTTTCTTCGCTCACATTCTCTTTTGCAGATTCGCATCATGCCGACCTCACATTTTGCAGTCGTGATGGCCGTTTTCGAGAGATTGATTTCCCAATGTATCATTCGGACGAGTTGATGGATGTCAGTGATCAGTTGGATTGGGAAACTTTCGTCTCCTTCAGTTCACAAGAGTTTATTAACATTGTAACGTTGAATAATTTTGATTCTGTTTTAGTCACAATAACGAATTCACAAGTCAAATTCTCTTATGCTGGGACACATATGATGCTTACTCGAGAGAGAAGACGATGCATTATTGGTGGAGTTGGAGTAAGTAATGAAATTGACTTTGTAGTAAATTTGAAAGCAAAGGAAAGTTTACGTAGATTGGCAAGTGATAAGAGAGATTCCTTAATGTCAAATGTACGTACATTAGATAAACTTCCTCTTGATACGCAAAAGATTCCCTCAATTCAATATGATGCATTCTTCACTATGGAAACAGAACTATTCAAAACCCTTATACGTGATTTAAATGATCATACAGCTAGGGTTACTGTAGCACGTTCATCTGTGAGATTCACTTCCAGTAAATTGTTGAACATTGGATTTACTAAACAATCTGGGAATTGCATAATCGGAGGCATTAAAAAAGTGAAAGATGAAATGAAATTTACACTCACTTTCAGGCCAGTTCCGTTCTTCGATAGCTTCTCAACAAAAAGGGTTTGGTTCTTTAGACCAAGTTTGAGTAATTGCATGGCAATGGTTTCTCCTGTTAATCTTCATGCTGAAATTACTTCCTACTTTGTCTAA

Protein sequence

MFVFILDEIHSFVDAVSILAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINHFFPEMFDLERTGFSSLTFSFADSHHADLTFCSRDGRFREIDFPMYHSDELMDVSDQLDWETFVSFSSQEFINIVTLNNFDSVLVTITNSQVKFSYAGTHMMLTRERRRCIIGGVGVSNEIDFVVNLKAKESLRRLASDKRDSLMSNVRTLDKLPLDTQKIPSIQYDAFFTMETELFKTLIRDLNDHTARVTVARSSVRFTSSKLLNIGFTKQSGNCIIGGIKKVKDEMKFTLTFRPVPFFDSFSTKRVWFFRPSLSNCMAMVSPVNLHAEITSYFV*

Homology

[Close]

BLAST of Chy11G202060 vs. ExPASy TrEMBL
Match: A0A5D3BU35 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00910 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 5.3e-76
Identity = 146/158 (92.41%), Postives = 149/158 (94.30%), Query Frame = 0


Query: 1   MFVFILDEIHSFVDAVSILAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQ 60
           MFVFIL+EIHSFVDAVS+LAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQ
Sbjct: 1   MFVFILEEIHSFVDAVSVLAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQ 60

Query: 61  QYSCQQLHYSWIYINHFFPEMFDLERTGFSSLTFSFADSHHADLTFCSRDGRFREIDFPM 120
           QYSCQQLHYSWIYIN FFPEMFD+ERTGFSSLTFSFADS HADLTFCSRDG  REIDFPM
Sbjct: 61  QYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSLHADLTFCSRDGHLREIDFPM 120

Query: 121 YHSDELMDVS-DQLDWETFVSFSSQEFINIVTLNNFDS 158
           YHSD  MD   DQLDWETFVSFSSQEFINIVTLNNFDS
Sbjct: 121 YHSDGSMDACYDQLDWETFVSFSSQEFINIVTLNNFDS 158

[Close]

BLAST of Chy11G202060 vs. ExPASy TrEMBL
Match: A0A1S3C702 (uncharacterized protein LOC103497737 OS=Cucumis melo OX=3656 GN=LOC103497737 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 7.4e-70
Identity = 136/148 (91.89%), Postives = 142/148 (95.95%), Query Frame = 0


Query: 205 KESLRRLASDKRDSLMSNVRTLDKLPLDTQKIPSIQYDAFFTMETELFKTLIRDLNDHTA 264
           KE +    SDKRDSL SNVRTLDKLPLDTQKIPSIQYDAFFTMETELFKTL+RDLNDHTA
Sbjct: 103 KEGVIIFYSDKRDSLASNVRTLDKLPLDTQKIPSIQYDAFFTMETELFKTLMRDLNDHTA 162

Query: 265 RVTVARSSVRFTSSKLLNIGFTKQSGNCIIGGIKKVKDEMKFTLTFRPVPFFDSFSTKRV 324
           RVTVARSSVRFTSSK+LNIGFTKQSGNCIIGGIKKVKDE+KFT+TFRPVPFFDSFSTKRV
Sbjct: 163 RVTVARSSVRFTSSKMLNIGFTKQSGNCIIGGIKKVKDEIKFTITFRPVPFFDSFSTKRV 222

Query: 325 WFFRPSLSNCMAMVSPVNLHAEITSYFV 353
           WFF+PSLSNCMAMVSPVNLHAEITSYFV
Sbjct: 223 WFFKPSLSNCMAMVSPVNLHAEITSYFV 250

[Close]

BLAST of Chy11G202060 vs. ExPASy TrEMBL
Match: A0A0A0K833 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002320 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.8e-55
Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 1   MFVFILDEIHSFVDAVSILAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQ 60
           MFVFILDEIHSFVDAVS LAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQ
Sbjct: 1   MFVFILDEIHSFVDAVSALAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQ 60

Query: 61  QYSCQQLHYSWIYINHFFPEMFDLERTGFSSLTFSFADSHHADLTFCSRDG 112
           QYSCQQLHYSWIYINHFFPEMF LERTGFSSLTFSFADSHHADLTFCSRDG
Sbjct: 61  QYSCQQLHYSWIYINHFFPEMFHLERTGFSSLTFSFADSHHADLTFCSRDG 111

[Close]

BLAST of Chy11G202060 vs. ExPASy TrEMBL
Match: A0A6J1KWL1 (uncharacterized protein LOC111498888 OS=Cucurbita maxima OX=3661 GN=LOC111498888 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.5e-41
Identity = 109/228 (47.81%), Postives = 136/228 (59.65%), Query Frame = 0


Query: 9   IHSFVDAVSILA-GLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQL 68
           +H  VDA S+LA     +F++KFSP MFSIMA  TPS  C IALQL P FFN  Y C QL
Sbjct: 1   MHDLVDATSVLAETYDDIFDIKFSPTMFSIMAATTPSSRCIIALQLSPQFFN-AYLCHQL 60

Query: 69  HYSWIYINHFFPEMFDLERTGFSSLTFSFADSHHADLT---------------------- 128
           HY +IYI  F+  M + ER GFSSLTF+F +    D                        
Sbjct: 61  HYKFIYIESFYDFMHNFERKGFSSLTFTFPEPDRVDSNVALRVMSEACINVYSCTIPWRF 120

Query: 129 ---------FCSRDGRFREIDFPMYHSDELMDVSDQLDWETFVSFSSQEFINIVT-LNNF 188
                    F   +G F E++ PM+ S ++MDV    D+ TFVS  SQEFINIVT  N+F
Sbjct: 121 LAATAILKFFDGSNGHFEEVELPMFPSSKVMDVG-AFDFGTFVSIDSQEFINIVTCFNDF 180

Query: 189 DSVLVTITNSQVKFSYAGTHMMLTRERRRCIIGGVGVSNEIDFVVNLK 204
           D VLVT+TNSQV FSY  T ++LT+ERR+CIIGGV  S E+ FV++L+
Sbjct: 181 DYVLVTLTNSQVIFSYGKTKIILTQERRQCIIGGVAASVEVVFVISLQ 226

[Close]

BLAST of Chy11G202060 vs. ExPASy TrEMBL
Match: A0A6J1H4N0 (uncharacterized protein LOC111460009 OS=Cucurbita moschata OX=3662 GN=LOC111460009 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 7.9e-40
Identity = 107/228 (46.93%), Postives = 133/228 (58.33%), Query Frame = 0


Query: 9   IHSFVDAVSILA-GLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQL 68
           +H  VDA S+LA     +F++KFSP MFSIMA  TPS  C I LQL P FFN  Y C QL
Sbjct: 1   MHDLVDATSVLAETYDDIFDIKFSPTMFSIMAATTPSSHCIIELQLSPQFFN-AYLCHQL 60

Query: 69  HYSWIYINHFFPEMFDLERTGFSSLTFSFADSHHADLT---------------------- 128
           HY +IYI  F+  M + ER GFSSLTF+F +    D                        
Sbjct: 61  HYKFIYIEDFYDFMHNFERKGFSSLTFTFPEPDRVDSNVAVRVMSEACINVYSCTIPWRF 120

Query: 129 ---------FCSRDGRFREIDFPMYHSDELMDVSDQLDWETFVSFSSQEFINIVT-LNNF 188
                    F   +G F E++ PM+ S ++MDV    D  TFVS  SQEFINIVT  N+F
Sbjct: 121 LAATAILKFFHGSNGHFEEVELPMFPSCKVMDVG-AFDIGTFVSIDSQEFINIVTYFNDF 180

Query: 189 DSVLVTITNSQVKFSYAGTHMMLTRERRRCIIGGVGVSNEIDFVVNLK 204
           D VLVT+ NSQV FSY  T ++LT ERR+CIIGGV  S+E+ FV++L+
Sbjct: 181 DYVLVTLINSQVMFSYGKTKIVLTEERRQCIIGGVAASDEVVFVISLQ 226

[Close]

BLAST of Chy11G202060 vs. NCBI nr
Match: TYK02997.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 294 bits (752), Expect = 1.22e-94
Identity = 146/158 (92.41%), Postives = 149/158 (94.30%), Query Frame = 0


Query: 1   MFVFILDEIHSFVDAVSILAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQ 60
           MFVFIL+EIHSFVDAVS+LAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQ
Sbjct: 1   MFVFILEEIHSFVDAVSVLAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQ 60

Query: 61  QYSCQQLHYSWIYINHFFPEMFDLERTGFSSLTFSFADSHHADLTFCSRDGRFREIDFPM 120
           QYSCQQLHYSWIYIN FFPEMFD+ERTGFSSLTFSFADS HADLTFCSRDG  REIDFPM
Sbjct: 61  QYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSLHADLTFCSRDGHLREIDFPM 120

Query: 121 YHSDELMDVS-DQLDWETFVSFSSQEFINIVTLNNFDS 157
           YHSD  MD   DQLDWETFVSFSSQEFINIVTLNNFDS
Sbjct: 121 YHSDGSMDACYDQLDWETFVSFSSQEFINIVTLNNFDS 158

[Close]

BLAST of Chy11G202060 vs. NCBI nr
Match: XP_031743963.1 (uncharacterized protein LOC116404740 [Cucumis sativus])

HSP 1 Score: 274 bits (701), Expect = 1.24e-87
Identity = 138/148 (93.24%), Postives = 141/148 (95.27%), Query Frame = 0


Query: 205 KESLRRLASDKRDSLMSNVRTLDKLPLDTQKIPSIQYDAFFTMETELFKTLIRDLNDHTA 264
           KE +    SDKRDSLMSNVRTLDKLPLDTQ IPSIQYDAFFTMETELFKTLIRDLNDHTA
Sbjct: 103 KEGVITFFSDKRDSLMSNVRTLDKLPLDTQDIPSIQYDAFFTMETELFKTLIRDLNDHTA 162

Query: 265 RVTVARSSVRFTSSKLLNIGFTKQSGNCIIGGIKKVKDEMKFTLTFRPVPFFDSFSTKRV 324
           RVTVARSSVRFTSSKLLNIGFTKQS NCIIGGIKKVKDEMKFT+TFRPVPFFDSFSTKRV
Sbjct: 163 RVTVARSSVRFTSSKLLNIGFTKQSRNCIIGGIKKVKDEMKFTITFRPVPFFDSFSTKRV 222

Query: 325 WFFRPSLSNCMAMVSPVNLHAEITSYFV 352
           WFFRPSLSNCMAMVSPVNLH+EITSYFV
Sbjct: 223 WFFRPSLSNCMAMVSPVNLHSEITSYFV 250

[Close]

BLAST of Chy11G202060 vs. NCBI nr
Match: XP_008458268.1 (PREDICTED: uncharacterized protein LOC103497737 [Cucumis melo])

HSP 1 Score: 273 bits (698), Expect = 3.51e-87
Identity = 136/148 (91.89%), Postives = 142/148 (95.95%), Query Frame = 0


Query: 205 KESLRRLASDKRDSLMSNVRTLDKLPLDTQKIPSIQYDAFFTMETELFKTLIRDLNDHTA 264
           KE +    SDKRDSL SNVRTLDKLPLDTQKIPSIQYDAFFTMETELFKTL+RDLNDHTA
Sbjct: 103 KEGVIIFYSDKRDSLASNVRTLDKLPLDTQKIPSIQYDAFFTMETELFKTLMRDLNDHTA 162

Query: 265 RVTVARSSVRFTSSKLLNIGFTKQSGNCIIGGIKKVKDEMKFTLTFRPVPFFDSFSTKRV 324
           RVTVARSSVRFTSSK+LNIGFTKQSGNCIIGGIKKVKDE+KFT+TFRPVPFFDSFSTKRV
Sbjct: 163 RVTVARSSVRFTSSKMLNIGFTKQSGNCIIGGIKKVKDEIKFTITFRPVPFFDSFSTKRV 222

Query: 325 WFFRPSLSNCMAMVSPVNLHAEITSYFV 352
           WFF+PSLSNCMAMVSPVNLHAEITSYFV
Sbjct: 223 WFFKPSLSNCMAMVSPVNLHAEITSYFV 250

[Close]

BLAST of Chy11G202060 vs. NCBI nr
Match: KGN45638.2 (hypothetical protein Csa_005465, partial [Cucumis sativus])

HSP 1 Score: 224 bits (570), Expect = 7.31e-70
Identity = 108/110 (98.18%), Postives = 108/110 (98.18%), Query Frame = 0


Query: 1   MFVFILDEIHSFVDAVSILAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQ 60
           MFVFILDEIHSFVDAVS LAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQ
Sbjct: 1   MFVFILDEIHSFVDAVSALAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQ 60

Query: 61  QYSCQQLHYSWIYINHFFPEMFDLERTGFSSLTFSFADSHHADLTFCSRD 110
           QYSCQQLHYSWIYINHFFPEMF LERTGFSSLTFSFADSHHADLTFCSRD
Sbjct: 61  QYSCQQLHYSWIYINHFFPEMFHLERTGFSSLTFSFADSHHADLTFCSRD 110

[Close]

BLAST of Chy11G202060 vs. NCBI nr
Match: XP_023006011.1 (uncharacterized protein LOC111498888 [Cucurbita maxima])

HSP 1 Score: 179 bits (453), Expect = 5.58e-50
Identity = 109/227 (48.02%), Postives = 135/227 (59.47%), Query Frame = 0


Query: 10  HSFVDAVSILAGL-GYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLH 69
           H  VDA S+LA     +F++KFSP MFSIMA  TPS  C IALQL P FFN  Y C QLH
Sbjct: 2   HDLVDATSVLAETYDDIFDIKFSPTMFSIMAATTPSSRCIIALQLSPQFFNA-YLCHQLH 61

Query: 70  YSWIYINHFFPEMFDLERTGFSSLTFSFADSHHADLTFCSR------------------- 129
           Y +IYI  F+  M + ER GFSSLTF+F +    D     R                   
Sbjct: 62  YKFIYIESFYDFMHNFERKGFSSLTFTFPEPDRVDSNVALRVMSEACINVYSCTIPWRFL 121

Query: 130 ------------DGRFREIDFPMYHSDELMDVSDQLDWETFVSFSSQEFINIVT-LNNFD 189
                       +G F E++ PM+ S ++MDV    D+ TFVS  SQEFINIVT  N+FD
Sbjct: 122 AATAILKFFDGSNGHFEEVELPMFPSSKVMDVG-AFDFGTFVSIDSQEFINIVTCFNDFD 181

Query: 190 SVLVTITNSQVKFSYAGTHMMLTRERRRCIIGGVGVSNEIDFVVNLK 203
            VLVT+TNSQV FSY  T ++LT+ERR+CIIGGV  S E+ FV++L+
Sbjct: 182 YVLVTLTNSQVIFSYGKTKIILTQERRQCIIGGVAASVEVVFVISLQ 226

The following BLAST results are available for this feature:

BLAST of Chy11G202060 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G202060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BU35	5.3e-76	92.41	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3C702	7.4e-70	91.89	uncharacterized protein LOC103497737 OS=Cucumis melo OX=3656 GN=LOC103497737 PE=...	[more]
A0A0A0K833	1.8e-55	98.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002320 PE=4 SV=1	[more]
A0A6J1KWL1	2.5e-41	47.81	uncharacterized protein LOC111498888 OS=Cucurbita maxima OX=3661 GN=LOC111498888...	[more]
A0A6J1H4N0	7.9e-40	46.93	uncharacterized protein LOC111460009 OS=Cucurbita moschata OX=3662 GN=LOC1114600...	[more]

BLAST of Chy11G202060 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK02997.1	1.22e-94	92.41	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
XP_031743963.1	1.24e-87	93.24	uncharacterized protein LOC116404740 [Cucumis sativus]	[more]
XP_008458268.1	3.51e-87	91.89	PREDICTED: uncharacterized protein LOC103497737 [Cucumis melo]	[more]
KGN45638.2	7.31e-70	98.18	hypothetical protein Csa_005465, partial [Cucumis sativus]	[more]
XP_023006011.1	5.58e-50	48.02	uncharacterized protein LOC111498888 [Cucurbita maxima]	[more]

BLAST of Chy11G202060 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.70.10.10		coord: 1..206 e-value: 1.6E-8 score: 36.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G202060.1	Chy11G202060.1	mRNA