Chy11G201580 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G201580
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH11: 22332751 .. 22333537 (-)
RNA-Seq Expression	Chy11G201580
Synteny	Chy11G201580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAATAGTTTTTCTTTTTTGGTTATGTAAACTCTAAATGATATATTTAAAATTTTGTAAATAAGGGGCCAATAGTGAAGCGACAAACATATATGGTGTCTCCACTGCGGTTAGTAAAACCGCACTTTTTATTTTTCTTGCATGATGATGAATTCTACAAAGTGCTTTAAGACGTTATTCACAATCTTTATTGCTTTTTTTTAAAAAAAACTAATGATATTTCTTGTTAATATTTTCCCCTCTCCATATATATTATCTCTTTGCAGTGTACAAAACAGTGGTCACAATTTTCCCTTTATATATATGCTTCATTTTTTCCCTAATTCATACCATATTATCCTTCCAATGCTCAAACAGATCATAAGGTAATTTTTTTAACATCAAATTCTTTCCTGATTTTGCCTTTTATTTACTGAAATCAAGCTTTGTTTTTCCTCTTTGTTTAGGGTTTTGCAGTAATGATTATGATGAAGAGGGTGCTTCTTCTCTTTGCTGCCTTGTTGTTGCTCCTCATGGCAGACGCTGTTATTGTCGAAAAGAAGGGTGCACGTAAGCTAGCTCAAGGCTTCAGTGAGCGAAGAACCCCCAAAGCAGGAGTGTTCATCGATGCAAATGAGTCTGACCTTGAGAACACTGATGTTGCTCCTGACGACGTTGTAGCTAGCAACAACGATAAGGATGACGATGAAGATGACGATGCAAATCTTGGTTATAAAAATTACGGAAAGGGCTCTGATACTGAAACTCACCGATACTTCTCAAGTGATAAGCCATATAGACCCTAG

mRNA sequence

ATGGGTTTTGCAGTAATGATTATGATGAAGAGGGTGCTTCTTCTCTTTGCTGCCTTGTTGTTGCTCCTCATGGCAGACGCTGTTATTGTCGAAAAGAAGGGTGCACGTAAGCTAGCTCAAGGCTTCAGTGAGCGAAGAACCCCCAAAGCAGGAGTGTTCATCGATGCAAATGAGTCTGACCTTGAGAACACTGATGTTGCTCCTGACGACGTTGTAGCTAGCAACAACGATAAGGATGACGATGAAGATGACGATGCAAATCTTGGTTATAAAAATTACGGAAAGGGCTCTGATACTGAAACTCACCGATACTTCTCAAGTGATAAGCCATATAGACCCTAG

Coding sequence (CDS)

ATGGGTTTTGCAGTAATGATTATGATGAAGAGGGTGCTTCTTCTCTTTGCTGCCTTGTTGTTGCTCCTCATGGCAGACGCTGTTATTGTCGAAAAGAAGGGTGCACGTAAGCTAGCTCAAGGCTTCAGTGAGCGAAGAACCCCCAAAGCAGGAGTGTTCATCGATGCAAATGAGTCTGACCTTGAGAACACTGATGTTGCTCCTGACGACGTTGTAGCTAGCAACAACGATAAGGATGACGATGAAGATGACGATGCAAATCTTGGTTATAAAAATTACGGAAAGGGCTCTGATACTGAAACTCACCGATACTTCTCAAGTGATAAGCCATATAGACCCTAG

Protein sequence

MGFAVMIMMKRVLLLFAALLLLLMADAVIVEKKGARKLAQGFSERRTPKAGVFIDANESDLENTDVAPDDVVASNNDKDDDEDDDANLGYKNYGKGSDTETHRYFSSDKPYRP*

Homology

[Close]

BLAST of Chy11G201580 vs. ExPASy TrEMBL
Match: A0A0A0KGD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327960 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.7e-44
Identity = 103/108 (95.37%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 6   MIMMKRVLLLFAALLLLLMADAVIVEKKGARKLAQGFSERRTPKAGVFIDANESDLENTD 65
           MIMMKRVLLLFAALLLLLMADAVIVEKKGARKLAQGFSERRTPKAGVF DANESDLENTD
Sbjct: 1   MIMMKRVLLLFAALLLLLMADAVIVEKKGARKLAQGFSERRTPKAGVFNDANESDLENTD 60

Query: 66  VAPDDVVASNNDKDDDEDDDANLGYKNYGKGSDTETHRYFSSDKPYRP 114
           VAPDDVVA+NN  DD+EDDDANLGYKNYGKGSDTETHRYFSSDKPYRP
Sbjct: 61  VAPDDVVANNNVNDDNEDDDANLGYKNYGKGSDTETHRYFSSDKPYRP 108

[Close]

BLAST of Chy11G201580 vs. ExPASy TrEMBL
Match: A0A5D3BV16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00430 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.2e-35
Identity = 88/109 (80.73%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 8   MMKRVLLLFAALLLLLMADAV---IVEKKGARKLAQGFSERRTPKAGVFIDANESDLENT 67
           MMKRVLLLFA LLLLLMADA    +VEKKGARKLAQG  +RR PKA VF DANE +L+ T
Sbjct: 1   MMKRVLLLFAVLLLLLMADAAMSNVVEKKGARKLAQGSGDRRIPKAEVFNDANEPELKKT 60

Query: 68  DVAPDDVVASNNDKDDDEDDDANLGYKNYGKGSDTETHRYFSSDKPYRP 114
           DVAPDDVVA+N D DD+EDDD NLGYKNYGKGSDTETHRYFSSDKPYRP
Sbjct: 61  DVAPDDVVANNIDNDDNEDDDVNLGYKNYGKGSDTETHRYFSSDKPYRP 109

[Close]

BLAST of Chy11G201580 vs. NCBI nr
Match: XP_004150985.1 (uncharacterized protein LOC101207042 [Cucumis sativus] >KGN47457.1 hypothetical protein Csa_021763 [Cucumis sativus])

HSP 1 Score: 189 bits (480), Expect = 6.15e-60
Identity = 103/108 (95.37%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 6   MIMMKRVLLLFAALLLLLMADAVIVEKKGARKLAQGFSERRTPKAGVFIDANESDLENTD 65
           MIMMKRVLLLFAALLLLLMADAVIVEKKGARKLAQGFSERRTPKAGVF DANESDLENTD
Sbjct: 1   MIMMKRVLLLFAALLLLLMADAVIVEKKGARKLAQGFSERRTPKAGVFNDANESDLENTD 60

Query: 66  VAPDDVVASNNDKDDDEDDDANLGYKNYGKGSDTETHRYFSSDKPYRP 113
           VAPDDVVA+NN  DD+EDDDANLGYKNYGKGSDTETHRYFSSDKPYRP
Sbjct: 61  VAPDDVVANNNVNDDNEDDDANLGYKNYGKGSDTETHRYFSSDKPYRP 108

[Close]

BLAST of Chy11G201580 vs. NCBI nr
Match: TYK02960.1 (uncharacterized protein E5676_scaffold46G00430 [Cucumis melo var. makuwa])

HSP 1 Score: 158 bits (400), Expect = 9.96e-48
Identity = 88/109 (80.73%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 8   MMKRVLLLFAALLLLLMADAV---IVEKKGARKLAQGFSERRTPKAGVFIDANESDLENT 67
           MMKRVLLLFA LLLLLMADA    +VEKKGARKLAQG  +RR PKA VF DANE +L+ T
Sbjct: 1   MMKRVLLLFAVLLLLLMADAAMSNVVEKKGARKLAQGSGDRRIPKAEVFNDANEPELKKT 60

Query: 68  DVAPDDVVASNNDKDDDEDDDANLGYKNYGKGSDTETHRYFSSDKPYRP 113
           DVAPDDVVA+N D DD+EDDD NLGYKNYGKGSDTETHRYFSSDKPYRP
Sbjct: 61  DVAPDDVVANNIDNDDNEDDDVNLGYKNYGKGSDTETHRYFSSDKPYRP 109

[Close]

BLAST of Chy11G201580 vs. NCBI nr
Match: KAG6594018.1 (hypothetical protein SDJN03_13494, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026358.1 hypothetical protein SDJN02_12860, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 104 bits (260), Expect = 1.73e-26
Identity = 67/109 (61.47%), Postives = 77/109 (70.64%), Query Frame = 0


Query: 8   MMKRVLLLFAALLLLLMADAV---IVEKKGARKLAQGFSERRTPKAGVFIDANESDLENT 67
           MMKR LLLFA  LLL+  DA    +++KK ARKLAQ FS +  PK GVF     S  E+ 
Sbjct: 3   MMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQSFSGQ-IPKTGVFGGVKYS--EDA 62

Query: 68  DVAPDDVVASNNDKDDDEDDDANLGYKNYGKGSDTETHRYFSSDKPYRP 113
           DVA  DV  +NN+ +DDE    NLGYKNYGKGSDTETHRYFSS+KPYRP
Sbjct: 63  DVAQADVGMNNNEDEDDE----NLGYKNYGKGSDTETHRYFSSEKPYRP 104

[Close]

BLAST of Chy11G201580 vs. NCBI nr
Match: KAG6575119.1 (hypothetical protein SDJN03_25758, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 95.9 bits (237), Expect = 6.37e-23
Identity = 60/110 (54.55%), Postives = 75/110 (68.18%), Query Frame = 0


Query: 8   MMKRVLLLFAALLLLLMADAV---IVEKKGARKLAQGFSERRTPKAGVFIDANESDLENT 67
           MMK+VL+L    LLL+M DA    +VEKK ARKLA+    + TP+  VF    E   E+ 
Sbjct: 1   MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDV 60

Query: 68  DVAP-DDVVASNNDKDDDEDDDANLGYKNYGKGSDTETHRYFSSDKPYRP 113
           +V    DVV + ++ ++ +DDD NLGYKNYGKGSDTETHRYFSSDKPY P
Sbjct: 61  EVVVVADVVTNIDNNNNVDDDDENLGYKNYGKGSDTETHRYFSSDKPYEP 110

[Close]

BLAST of Chy11G201580 vs. NCBI nr
Match: KAG7013689.1 (hypothetical protein SDJN02_23856, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 95.9 bits (237), Expect = 1.11e-22
Identity = 60/110 (54.55%), Postives = 75/110 (68.18%), Query Frame = 0


Query: 8   MMKRVLLLFAALLLLLMADAV---IVEKKGARKLAQGFSERRTPKAGVFIDANESDLENT 67
           MMK+VL+L    LLL+M DA    +VEKK ARKLA+    + TP+  VF    E   E+ 
Sbjct: 21  MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDV 80

Query: 68  DVAP-DDVVASNNDKDDDEDDDANLGYKNYGKGSDTETHRYFSSDKPYRP 113
           +V    DVV + ++ ++ +DDD NLGYKNYGKGSDTETHRYFSSDKPY P
Sbjct: 81  EVVVVADVVTNIDNNNNVDDDDENLGYKNYGKGSDTETHRYFSSDKPYEP 130

The following BLAST results are available for this feature:

BLAST of Chy11G201580 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G201580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGD6	1.7e-44	95.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327960 PE=4 SV=1	[more]
A0A5D3BV16	4.2e-35	80.73	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Chy11G201580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150985.1	6.15e-60	95.37	uncharacterized protein LOC101207042 [Cucumis sativus] >KGN47457.1 hypothetical ...	[more]
TYK02960.1	9.96e-48	80.73	uncharacterized protein E5676_scaffold46G00430 [Cucumis melo var. makuwa]	[more]
KAG6594018.1	1.73e-26	61.47	hypothetical protein SDJN03_13494, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6575119.1	6.37e-23	54.55	hypothetical protein SDJN03_25758, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7013689.1	1.11e-22	54.55	hypothetical protein SDJN02_23856, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Chy11G201580 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G201580.1	Chy11G201580.1	mRNA