Chy11G201220 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGTTTTCACATACGAAAACGAAGTAACCTCAGTGGTTCCTCCAACTAAATTCTTCAAAGCATTTATTCTTGATGCTGACAACCTTTACCCTAAGATTATCCCAAGTCATCCTCAAACTGAAATTTTTGAAGGAAATGGTGGCCCTGGAACTATCAAGAAGATCACCTTCAGTCATGGTAATTAACCTTATATTTACCATCATTACCTTTGGTGTTTCTCTCCTAATTACCAATTTTACTTTTTTAATTATGTGTCATATTGTCTCAACTTTAAAAAATGTTTTTACTTATTATCCTTGTGTGTTTAACAAACTCAGGACCTTTTAAAAACGTGTAATTTGTCATTTGATGTGTTTAATAGGTTATTGGTCCTATTTAACCGTTTTTTGAAAATTTGATAAAAAAATTTACAACATGTAGCAAAATTTCAGATTCTATTAATAATAACATTAATAGACAATTATATGCTTATATCAATGTCATTGATAGACAATGGTAGAAGTCTATCGGTTTCAGTCATTGATAGAATTTAAAATTTCTATAACTTATAAATATTTTAATTTATTTTACTATTTAAAAAAAAAAAGTCTTCCAGTTTTTTTTTATAAAAATTTACTAAACCATTGGATACTAAAATCGAAAGGCTAGGTCATATGTTTGTTAATTATTTGGGTTGTGACTAATAATTTTGTTTGGTTTCTTCCATTTATTTACCTTAGATTTAATTTGTTTCACTTGAAGGTGAAATTACAAGGGGTGTTTGAACACTCATAATATAATTGGAATGCATTGTAATGTAATCCAAAATTCATATTTGAATTGAGCATTTTGAATTTAAATTGTAGTATTAAAATTATTTTGTTTTGACGTTTTTCAATTAAGCTCTATTTTCTATCGTTTTTACTTTTTTCAGTTTCAATTTTGTTATGCTTTTAATTTTCTATTTTCAGTTCCAACACTTCTATCATTTCAATTAATTCTAATTATATTTTAGTTTTCAAACACCCTGATCACGTGGAGTTGTAGAAATGTCTTTCCTATTACTAAGAAAGTATATTTTTTTAAAAAAAATTCAAAGTTGCATAATCTTTAATCCGAAATTTTCTAAAAAAAAAAAAAAAATAGTATAATGTCTTATTGATATAAACTTTAGTTTTATATTTAATAAAATAAAATAATTTTTTTTGATAAAATGTTAATACCGTAAAGAGAAATTGTTATGGATAGCAAAATATTGAAACTATTTATAAAATATAATTAAAAAAAACTTGAATAAGTTATAGAGAACGACAAATTTTGCTATATTTTGTAAATAGTTTAAACATTCTGCTATTTTAAAAAACGCTCCTACAATAAACTAGGAATCTTTTAGTAGAAGCTGTATTATGTTCATAAAATATATATATTTATTAATTAAATTTTTGCAGGAGGGGAATTGAAAACCATAGCGCACAGGCTAGACGTAGTGGACGAAGCATCATTGACGTACAAATACACGGTGTTAGAAGGAGACCTTATTTCAGAAACTATTGACCAAATTGTTAAGGAAATTAAGGTAACGGAAGGTCCTGACGGAGGTTCCATTTTGAAGAGCACTAGCGTTTACCACACCAAAGGAGACAACCAACTGGACGAGGGAAAACTCAAAATCGGTGAAGAAAAGGGATTGGCACTTCTCAAAGCCGCCGAGGCCTACCTCTTGGCCAACCCCGCCGAATACAACTAA ATGGGTGTTTTCACATACGAAAACGAAGTAACCTCAGTGGTTCCTCCAACTAAATTCTTCAAAGCATTTATTCTTGATGCTGACAACCTTTACCCTAAGATTATCCCAAGTCATCCTCAAACTGAAATTTTTGAAGGAAATGGTGGCCCTGGAACTATCAAGAAGATCACCTTCAGTCATGGAGGGGAATTGAAAACCATAGCGCACAGGCTAGACGTAGTGGACGAAGCATCATTGACGTACAAATACACGGTGTTAGAAGGAGACCTTATTTCAGAAACTATTGACCAAATTGTTAAGGAAATTAAGGTAACGGAAGGTCCTGACGGAGGTTCCATTTTGAAGAGCACTAGCGTTTACCACACCAAAGGAGACAACCAACTGGACGAGGGAAAACTCAAAATCGGTGAAGAAAAGGGATTGGCACTTCTCAAAGCCGCCGAGGCCTACCTCTTGGCCAACCCCGCCGAATACAACTAA ATGGGTGTTTTCACATACGAAAACGAAGTAACCTCAGTGGTTCCTCCAACTAAATTCTTCAAAGCATTTATTCTTGATGCTGACAACCTTTACCCTAAGATTATCCCAAGTCATCCTCAAACTGAAATTTTTGAAGGAAATGGTGGCCCTGGAACTATCAAGAAGATCACCTTCAGTCATGGAGGGGAATTGAAAACCATAGCGCACAGGCTAGACGTAGTGGACGAAGCATCATTGACGTACAAATACACGGTGTTAGAAGGAGACCTTATTTCAGAAACTATTGACCAAATTGTTAAGGAAATTAAGGTAACGGAAGGTCCTGACGGAGGTTCCATTTTGAAGAGCACTAGCGTTTACCACACCAAAGGAGACAACCAACTGGACGAGGGAAAACTCAAAATCGGTGAAGAAAAGGGATTGGCACTTCTCAAAGCCGCCGAGGCCTACCTCTTGGCCAACCCCGCCGAATACAACTAA MGVFTYENEVTSVVPPTKFFKAFILDADNLYPKIIPSHPQTEIFEGNGGPGTIKKITFSHGGELKTIAHRLDVVDEASLTYKYTVLEGDLISETIDQIVKEIKVTEGPDGGSILKSTSVYHTKGDNQLDEGKLKIGEEKGLALLKAAEAYLLANPAEYN* Homology
BLAST of Chy11G201220 vs. ExPASy Swiss-Prot
Match: O50001 (Major allergen Pru ar 1 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 5.9e-48 Identity = 91/160 (56.88%), Postives = 118/160 (73.75%), Query Frame = 0
BLAST of Chy11G201220 vs. ExPASy Swiss-Prot
Match: D0E0C6 (Major strawberry allergen Fra a 1-2 OS=Fragaria ananassa OX=3747 GN=FRAA2 PE=1 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 1.8e-44 Identity = 87/159 (54.72%), Postives = 112/159 (70.44%), Query Frame = 0
BLAST of Chy11G201220 vs. ExPASy Swiss-Prot
Match: A0A024B404 (Major strawberry allergen Fra a 1.05 OS=Fragaria ananassa OX=3747 GN=Fra a 1.05 PE=1 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 4.0e-44 Identity = 87/159 (54.72%), Postives = 112/159 (70.44%), Query Frame = 0
BLAST of Chy11G201220 vs. ExPASy Swiss-Prot
Match: A0A024B3D0 (Major strawberry allergen Fra a 1.04 OS=Fragaria ananassa OX=3747 GN=Fra a 1.04 PE=1 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 8.8e-44 Identity = 86/159 (54.09%), Postives = 112/159 (70.44%), Query Frame = 0
BLAST of Chy11G201220 vs. ExPASy Swiss-Prot
Match: A0A024B3G5 (Major strawberry allergen Fra a 1.06 OS=Fragaria ananassa OX=3747 GN=Fra a 1.06 PE=1 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 8.8e-44 Identity = 86/159 (54.09%), Postives = 112/159 (70.44%), Query Frame = 0
BLAST of Chy11G201220 vs. ExPASy TrEMBL
Match: A0A0A0KD04 (Bet_v_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G313090 PE=3 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 2.5e-81 Identity = 155/159 (97.48%), Postives = 155/159 (97.48%), Query Frame = 0
BLAST of Chy11G201220 vs. ExPASy TrEMBL
Match: A0A5D3BVU0 (Major allergen Pru ar 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00120 PE=3 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 7.4e-78 Identity = 148/159 (93.08%), Postives = 154/159 (96.86%), Query Frame = 0
BLAST of Chy11G201220 vs. ExPASy TrEMBL
Match: A0A1S3C906 (major allergen Pru ar 1-like OS=Cucumis melo OX=3656 GN=LOC103497814 PE=3 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 7.4e-78 Identity = 148/159 (93.08%), Postives = 154/159 (96.86%), Query Frame = 0
BLAST of Chy11G201220 vs. ExPASy TrEMBL
Match: A0A5D3BT68 (Major allergen Pru ar 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00110 PE=3 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 2.8e-77 Identity = 147/159 (92.45%), Postives = 154/159 (96.86%), Query Frame = 0
BLAST of Chy11G201220 vs. ExPASy TrEMBL
Match: A0A1S3C7A2 (major allergen Pru ar 1-like OS=Cucumis melo OX=3656 GN=LOC103497815 PE=3 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 2.8e-77 Identity = 147/159 (92.45%), Postives = 154/159 (96.86%), Query Frame = 0
BLAST of Chy11G201220 vs. NCBI nr
Match: XP_004151334.2 (major allergen Pru ar 1 [Cucumis sativus] >KAE8647087.1 hypothetical protein Csa_023045 [Cucumis sativus]) HSP 1 Score: 314 bits (804), Expect = 8.58e-108 Identity = 157/159 (98.74%), Postives = 157/159 (98.74%), Query Frame = 0
BLAST of Chy11G201220 vs. NCBI nr
Match: XP_008458391.1 (PREDICTED: major allergen Pru ar 1-like [Cucumis melo] >TYK02932.1 major allergen Pru ar 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 298 bits (763), Expect = 1.53e-101 Identity = 148/159 (93.08%), Postives = 154/159 (96.86%), Query Frame = 0
BLAST of Chy11G201220 vs. NCBI nr
Match: XP_008458392.1 (PREDICTED: major allergen Pru ar 1-like [Cucumis melo] >TYK02931.1 major allergen Pru ar 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 296 bits (758), Expect = 8.87e-101 Identity = 147/159 (92.45%), Postives = 154/159 (96.86%), Query Frame = 0
BLAST of Chy11G201220 vs. NCBI nr
Match: XP_004151333.2 (major allergen Pru ar 1 [Cucumis sativus] >KGN47407.1 hypothetical protein Csa_022915 [Cucumis sativus]) HSP 1 Score: 291 bits (745), Expect = 8.52e-99 Identity = 144/159 (90.57%), Postives = 148/159 (93.08%), Query Frame = 0
BLAST of Chy11G201220 vs. NCBI nr
Match: XP_038876264.1 (major allergen Pru ar 1-like [Benincasa hispida]) HSP 1 Score: 288 bits (738), Expect = 9.94e-98 Identity = 138/159 (86.79%), Postives = 151/159 (94.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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