Chy11G199310 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G199310
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Smr domain-containing protein
Location	chrH11: 19787961 .. 19788756 (+)
RNA-Seq Expression	Chy11G199310
Synteny	Chy11G199310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAACCCTAAGAATAAGAAGAAGAAGAAGAAGATCATCCCATCGCCGGCGTTGGGATCCACCCCTGCTACTATTGTTGCCAAAGATAATGTTACTAATGCCGTCGATGCAGTGACGGAGGCGTTATCTGTGGCTTCTCTTAACGATCCCTCGTTACCTGTTTCTAGACAAGCTAGGGTTGGTCTGGATGAAGACGTTGATAGTTTTGACGATTTGGCTACGACTTCTTCCTCGTCTTCAAGTGCGATCACGGCTTCGAGTTCGAGTTCGAGTTGGTATTCCTCTGAGGATGTTTTAGATTATAAAGGTTATATGGGGAAGAAACAGAAACGGGTCGTTGCTTCTACGGGAACAATATCTACGGTTTTAGGGAAGGATTATGTTCGGTCCTCATTGAAAAGGGATTCGAGGAATAAATTCATGGAGTTTGACCGTGGGAAGTTTTCTCAACAGGAGGCAGAGCAATTCCTTTGCTCCATGTTAGGGGATGAGTGTGAACTGAGCATGGCCGTCGTAAGAGATGTGCTATGTGAGTACCTTTATTATTCCTCATACCTCTTTAGTTTAGATTTAATGGTGTCTGAGTAGCAAACGATGCTATTTTGCTAGTTTGACTTTTATTCATTCGTATTTATCTGTATATCCAGTTATTTCTAATGTAGTGATTTATGTTAGATTATAGATAATATGAATGCTTATCATCTTAATTATAGATTATAGATAAGGTTGTAATTAAACCATATTGCAAATTTCAGGTTTCAGTACTCTAATAATCTGGGAGAGAAAGTTCTAG

mRNA sequence

ATGAAGAACCCTAAGAATAAGAAGAAGAAGAAGAAGATCATCCCATCGCCGGCGTTGGGATCCACCCCTGCTACTATTGTTGCCAAAGATAATGTTACTAATGCCGTCGATGCAGTGACGGAGGCGTTATCTGTGGCTTCTCTTAACGATCCCTCGTTACCTGTTTCTAGACAAGCTAGGGTTGGTCTGGATGAAGACGTTGATAGTTTTGACGATTTGGCTACGACTTCTTCCTCGTCTTCAAGTGCGATCACGGCTTCGAGTTCGAGTTCGAGTTGGTATTCCTCTGAGGATGTTTTAGATTATAAAGGTTATATGGGGAAGAAACAGAAACGGGTCGTTGCTTCTACGGGAACAATATCTACGGTTTTAGGGAAGGATTATGTTCGGTCCTCATTGAAAAGGGATTCGAGGAATAAATTCATGGAGTTTGACCGTGGGAAGTTTTCTCAACAGGAGGCAGAGCAATTCCTTTGCTCCATGTTAGGGGATGAGTGTGAACTGAGCATGGCCGTCGTAAGAGATGTGCTATGTTTCAGTACTCTAATAATCTGGGAGAGAAAGTTCTAG

Coding sequence (CDS)

ATGAAGAACCCTAAGAATAAGAAGAAGAAGAAGAAGATCATCCCATCGCCGGCGTTGGGATCCACCCCTGCTACTATTGTTGCCAAAGATAATGTTACTAATGCCGTCGATGCAGTGACGGAGGCGTTATCTGTGGCTTCTCTTAACGATCCCTCGTTACCTGTTTCTAGACAAGCTAGGGTTGGTCTGGATGAAGACGTTGATAGTTTTGACGATTTGGCTACGACTTCTTCCTCGTCTTCAAGTGCGATCACGGCTTCGAGTTCGAGTTCGAGTTGGTATTCCTCTGAGGATGTTTTAGATTATAAAGGTTATATGGGGAAGAAACAGAAACGGGTCGTTGCTTCTACGGGAACAATATCTACGGTTTTAGGGAAGGATTATGTTCGGTCCTCATTGAAAAGGGATTCGAGGAATAAATTCATGGAGTTTGACCGTGGGAAGTTTTCTCAACAGGAGGCAGAGCAATTCCTTTGCTCCATGTTAGGGGATGAGTGTGAACTGAGCATGGCCGTCGTAAGAGATGTGCTATGTTTCAGTACTCTAATAATCTGGGAGAGAAAGTTCTAG

Protein sequence

MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQARVGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVLDYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLCFSTLIIWERKF*

Homology

[Close]

BLAST of Chy11G199310 vs. ExPASy Swiss-Prot
Match: O65573 (SMR domain-containing protein At5g58720 OS=Arabidopsis thaliana OX=3702 GN=PIPC PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.3e-13
Identity = 76/215 (35.35%), Postives = 113/215 (52.56%), Query Frame = 0


Query: 2   KNPKNKKKKKKIIPSPALGSTPATIVAKD---------------NV-TNAVDAVTEAL-- 61
           KN   KKKK+     P+   T +    KD               NV  N ++++ EA   
Sbjct: 4   KNQHKKKKKRSCAAKPSGDGTTSDGNKKDVEEERKDGEGKREIENVGKNFIESLMEAFCS 63

Query: 62  -----SVASLNDPSLPVSRQARVGLDEDVDSFDDLATTS--SSSSSAITASSS----SSS 121
                ++A+  +    +++ A + L + V+S DD +T+S  S SS   TAS+S     SS
Sbjct: 64  VSMEEAMAAYKEAGGDLNKAAEI-LSDLVESGDDPSTSSVASGSSGQETASTSEYGAGSS 123

Query: 122 WYSSEDVLDYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGK---- 179
              SED+   + + G KQ RV+A+TG +S+V+ KDY++ +     R +F   +R K    
Sbjct: 124 SSCSEDLTRDRWFKGSKQSRVIAATGMVSSVIAKDYLKPN---PVRKEFPMMERSKELCG 183

[Close]

BLAST of Chy11G199310 vs. ExPASy TrEMBL
Match: A0A0A0KFA5 (Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G185310 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 5.5e-80
Identity = 170/178 (95.51%), Postives = 173/178 (97.19%), Query Frame = 0


Query: 1   MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQAR 60
           MKNPKNKKKKKKII SPALGSTPATIVAKD+V NAV AVTEALSVASLNDPSLPVSRQAR
Sbjct: 1   MKNPKNKKKKKKIIQSPALGSTPATIVAKDSVINAVGAVTEALSVASLNDPSLPVSRQAR 60

Query: 61  VGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVLDYKGYMGKKQKRVVASTGTI 120
           VGL+EDVDSFDDLATTSSSSSSAITASSSSSS YSSEDVLDYKGYMGKKQKR+VASTGTI
Sbjct: 61  VGLNEDVDSFDDLATTSSSSSSAITASSSSSSSYSSEDVLDYKGYMGKKQKRLVASTGTI 120

Query: 121 STVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC 179
           STVLGKDYVRSSLKRDSRNKFMEFDRGKFSQ EAEQFLCSMLGDECELSMAVVRDVLC
Sbjct: 121 STVLGKDYVRSSLKRDSRNKFMEFDRGKFSQHEAEQFLCSMLGDECELSMAVVRDVLC 178

[Close]

BLAST of Chy11G199310 vs. ExPASy TrEMBL
Match: A0A1S4E4I2 (SMR domain-containing protein At5g58720 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502020 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.7e-73
Identity = 161/178 (90.45%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQAR 60
           MKNPKNKKKKKK+IPS ALGSTPAT   KDNV N+V  VTEALSVASLNDPSLPV R+AR
Sbjct: 1   MKNPKNKKKKKKVIPSSALGSTPAT--NKDNVINSVGVVTEALSVASLNDPSLPVPREAR 60

Query: 61  VGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVLDYKGYMGKKQKRVVASTGTI 120
           VGL+ED DSFDD ATTSSSSSSAITASSSSS  YSSEDVLDYKGYMGKKQKRVVASTGTI
Sbjct: 61  VGLNEDADSFDDFATTSSSSSSAITASSSSS--YSSEDVLDYKGYMGKKQKRVVASTGTI 120

Query: 121 STVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC 179
           STVLGKDYVRSSLKRDSRNKFMEFD GKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
Sbjct: 121 STVLGKDYVRSSLKRDSRNKFMEFDHGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC 174

[Close]

BLAST of Chy11G199310 vs. ExPASy TrEMBL
Match: A0A5D3CV78 (SMR domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00740 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.7e-73
Identity = 161/178 (90.45%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQAR 60
           MKNPKNKKKKKK+IPS ALGSTPAT   KDNV N+V  VTEALSVASLNDPSLPV R+AR
Sbjct: 1   MKNPKNKKKKKKVIPSSALGSTPAT--NKDNVINSVGVVTEALSVASLNDPSLPVPREAR 60

Query: 61  VGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVLDYKGYMGKKQKRVVASTGTI 120
           VGL+ED DSFDD ATTSSSSSSAITASSSSS  YSSEDVLDYKGYMGKKQKRVVASTGTI
Sbjct: 61  VGLNEDADSFDDFATTSSSSSSAITASSSSS--YSSEDVLDYKGYMGKKQKRVVASTGTI 120

Query: 121 STVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC 179
           STVLGKDYVRSSLKRDSRNKFMEFD GKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
Sbjct: 121 STVLGKDYVRSSLKRDSRNKFMEFDHGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC 174

[Close]

BLAST of Chy11G199310 vs. ExPASy TrEMBL
Match: A0A1S4E596 (SMR domain-containing protein At5g58720 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502020 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.7e-73
Identity = 161/178 (90.45%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQAR 60
           MKNPKNKKKKKK+IPS ALGSTPAT   KDNV N+V  VTEALSVASLNDPSLPV R+AR
Sbjct: 1   MKNPKNKKKKKKVIPSSALGSTPAT--NKDNVINSVGVVTEALSVASLNDPSLPVPREAR 60

Query: 61  VGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVLDYKGYMGKKQKRVVASTGTI 120
           VGL+ED DSFDD ATTSSSSSSAITASSSSS  YSSEDVLDYKGYMGKKQKRVVASTGTI
Sbjct: 61  VGLNEDADSFDDFATTSSSSSSAITASSSSS--YSSEDVLDYKGYMGKKQKRVVASTGTI 120

Query: 121 STVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC 179
           STVLGKDYVRSSLKRDSRNKFMEFD GKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
Sbjct: 121 STVLGKDYVRSSLKRDSRNKFMEFDHGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC 174

[Close]

BLAST of Chy11G199310 vs. ExPASy TrEMBL
Match: A0A1S4E4J9 (SMR domain-containing protein At5g58720 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103502020 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.7e-73
Identity = 161/178 (90.45%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQAR 60
           MKNPKNKKKKKK+IPS ALGSTPAT   KDNV N+V  VTEALSVASLNDPSLPV R+AR
Sbjct: 1   MKNPKNKKKKKKVIPSSALGSTPAT--NKDNVINSVGVVTEALSVASLNDPSLPVPREAR 60

Query: 61  VGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVLDYKGYMGKKQKRVVASTGTI 120
           VGL+ED DSFDD ATTSSSSSSAITASSSSS  YSSEDVLDYKGYMGKKQKRVVASTGTI
Sbjct: 61  VGLNEDADSFDDFATTSSSSSSAITASSSSS--YSSEDVLDYKGYMGKKQKRVVASTGTI 120

Query: 121 STVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC 179
           STVLGKDYVRSSLKRDSRNKFMEFD GKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
Sbjct: 121 STVLGKDYVRSSLKRDSRNKFMEFDHGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC 174

[Close]

BLAST of Chy11G199310 vs. NCBI nr
Match: XP_031742718.1 (SMR domain-containing protein At5g58720 isoform X3 [Cucumis sativus])

HSP 1 Score: 308 bits (790), Expect = 6.15e-101
Identity = 170/178 (95.51%), Postives = 173/178 (97.19%), Query Frame = 0


Query: 1   MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQAR 60
           MKNPKNKKKKKKII SPALGSTPATIVAKD+V NAV AVTEALSVASLNDPSLPVSRQAR
Sbjct: 1   MKNPKNKKKKKKIIQSPALGSTPATIVAKDSVINAVGAVTEALSVASLNDPSLPVSRQAR 60

Query: 61  VGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVLDYKGYMGKKQKRVVASTGTI 120
           VGL+EDVDSFDDLATTSSSSSSAITASSSSSS YSSEDVLDYKGYMGKKQKR+VASTGTI
Sbjct: 61  VGLNEDVDSFDDLATTSSSSSSAITASSSSSSSYSSEDVLDYKGYMGKKQKRLVASTGTI 120

Query: 121 STVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC 178
           STVLGKDYVRSSLKRDSRNKFMEFDRGKFSQ EAEQFLCSMLGDECELSMAVVRDVLC
Sbjct: 121 STVLGKDYVRSSLKRDSRNKFMEFDRGKFSQHEAEQFLCSMLGDECELSMAVVRDVLC 178

[Close]

BLAST of Chy11G199310 vs. NCBI nr
Match: XP_031742717.1 (SMR domain-containing protein At5g58720 isoform X2 [Cucumis sativus])

HSP 1 Score: 308 bits (790), Expect = 6.53e-101
Identity = 170/178 (95.51%), Postives = 173/178 (97.19%), Query Frame = 0


Query: 1   MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQAR 60
           MKNPKNKKKKKKII SPALGSTPATIVAKD+V NAV AVTEALSVASLNDPSLPVSRQAR
Sbjct: 1   MKNPKNKKKKKKIIQSPALGSTPATIVAKDSVINAVGAVTEALSVASLNDPSLPVSRQAR 60

Query: 61  VGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVLDYKGYMGKKQKRVVASTGTI 120
           VGL+EDVDSFDDLATTSSSSSSAITASSSSSS YSSEDVLDYKGYMGKKQKR+VASTGTI
Sbjct: 61  VGLNEDVDSFDDLATTSSSSSSAITASSSSSSSYSSEDVLDYKGYMGKKQKRLVASTGTI 120

Query: 121 STVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC 178
           STVLGKDYVRSSLKRDSRNKFMEFDRGKFSQ EAEQFLCSMLGDECELSMAVVRDVLC
Sbjct: 121 STVLGKDYVRSSLKRDSRNKFMEFDRGKFSQHEAEQFLCSMLGDECELSMAVVRDVLC 178

[Close]

BLAST of Chy11G199310 vs. NCBI nr
Match: XP_004143157.1 (SMR domain-containing protein At5g58720 isoform X1 [Cucumis sativus] >KGN47082.1 hypothetical protein Csa_020599 [Cucumis sativus])

HSP 1 Score: 308 bits (790), Expect = 3.26e-100
Identity = 170/178 (95.51%), Postives = 173/178 (97.19%), Query Frame = 0


Query: 1   MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQAR 60
           MKNPKNKKKKKKII SPALGSTPATIVAKD+V NAV AVTEALSVASLNDPSLPVSRQAR
Sbjct: 1   MKNPKNKKKKKKIIQSPALGSTPATIVAKDSVINAVGAVTEALSVASLNDPSLPVSRQAR 60

Query: 61  VGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVLDYKGYMGKKQKRVVASTGTI 120
           VGL+EDVDSFDDLATTSSSSSSAITASSSSSS YSSEDVLDYKGYMGKKQKR+VASTGTI
Sbjct: 61  VGLNEDVDSFDDLATTSSSSSSAITASSSSSSSYSSEDVLDYKGYMGKKQKRLVASTGTI 120

Query: 121 STVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC 178
           STVLGKDYVRSSLKRDSRNKFMEFDRGKFSQ EAEQFLCSMLGDECELSMAVVRDVLC
Sbjct: 121 STVLGKDYVRSSLKRDSRNKFMEFDRGKFSQHEAEQFLCSMLGDECELSMAVVRDVLC 178

[Close]

BLAST of Chy11G199310 vs. NCBI nr
Match: XP_016903147.1 (PREDICTED: SMR domain-containing protein At5g58720 isoform X5 [Cucumis melo])

HSP 1 Score: 287 bits (734), Expect = 1.17e-92
Identity = 161/178 (90.45%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQAR 60
           MKNPKNKKKKKK+IPS ALGSTPAT   KDNV N+V  VTEALSVASLNDPSLPV R+AR
Sbjct: 1   MKNPKNKKKKKKVIPSSALGSTPATN--KDNVINSVGVVTEALSVASLNDPSLPVPREAR 60

Query: 61  VGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVLDYKGYMGKKQKRVVASTGTI 120
           VGL+ED DSFDD ATTSSSSSSAITASSSSS  YSSEDVLDYKGYMGKKQKRVVASTGTI
Sbjct: 61  VGLNEDADSFDDFATTSSSSSSAITASSSSS--YSSEDVLDYKGYMGKKQKRVVASTGTI 120

Query: 121 STVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC 178
           STVLGKDYVRSSLKRDSRNKFMEFD GKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
Sbjct: 121 STVLGKDYVRSSLKRDSRNKFMEFDHGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC 174

[Close]

BLAST of Chy11G199310 vs. NCBI nr
Match: XP_016903146.1 (PREDICTED: SMR domain-containing protein At5g58720 isoform X4 [Cucumis melo])

HSP 1 Score: 287 bits (734), Expect = 1.17e-92
Identity = 161/178 (90.45%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MKNPKNKKKKKKIIPSPALGSTPATIVAKDNVTNAVDAVTEALSVASLNDPSLPVSRQAR 60
           MKNPKNKKKKKK+IPS ALGSTPAT   KDNV N+V  VTEALSVASLNDPSLPV R+AR
Sbjct: 1   MKNPKNKKKKKKVIPSSALGSTPATN--KDNVINSVGVVTEALSVASLNDPSLPVPREAR 60

Query: 61  VGLDEDVDSFDDLATTSSSSSSAITASSSSSSWYSSEDVLDYKGYMGKKQKRVVASTGTI 120
           VGL+ED DSFDD ATTSSSSSSAITASSSSS  YSSEDVLDYKGYMGKKQKRVVASTGTI
Sbjct: 61  VGLNEDADSFDDFATTSSSSSSAITASSSSS--YSSEDVLDYKGYMGKKQKRVVASTGTI 120

Query: 121 STVLGKDYVRSSLKRDSRNKFMEFDRGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC 178
           STVLGKDYVRSSLKRDSRNKFMEFD GKFSQQEAEQFLCSMLGDECELSMAVVRDVLC
Sbjct: 121 STVLGKDYVRSSLKRDSRNKFMEFDHGKFSQQEAEQFLCSMLGDECELSMAVVRDVLC 174

[Close]

BLAST of Chy11G199310 vs. TAIR 10
Match: AT5G58720.1 (smr (Small MutS Related) domain-containing protein )

HSP 1 Score: 75.5 bits (184), Expect = 5.2e-14
Identity = 76/215 (35.35%), Postives = 113/215 (52.56%), Query Frame = 0


Query: 2   KNPKNKKKKKKIIPSPALGSTPATIVAKD---------------NV-TNAVDAVTEAL-- 61
           KN   KKKK+     P+   T +    KD               NV  N ++++ EA   
Sbjct: 4   KNQHKKKKKRSCAAKPSGDGTTSDGNKKDVEEERKDGEGKREIENVGKNFIESLMEAFCS 63

Query: 62  -----SVASLNDPSLPVSRQARVGLDEDVDSFDDLATTS--SSSSSAITASSS----SSS 121
                ++A+  +    +++ A + L + V+S DD +T+S  S SS   TAS+S     SS
Sbjct: 64  VSMEEAMAAYKEAGGDLNKAAEI-LSDLVESGDDPSTSSVASGSSGQETASTSEYGAGSS 123

Query: 122 WYSSEDVLDYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGK---- 179
              SED+   + + G KQ RV+A+TG +S+V+ KDY++ +     R +F   +R K    
Sbjct: 124 SSCSEDLTRDRWFKGSKQSRVIAATGMVSSVIAKDYLKPN---PVRKEFPMMERSKELCG 183

[Close]

BLAST of Chy11G199310 vs. TAIR 10
Match: AT5G58720.2 (smr (Small MutS Related) domain-containing protein )

HSP 1 Score: 75.5 bits (184), Expect = 5.2e-14
Identity = 76/215 (35.35%), Postives = 113/215 (52.56%), Query Frame = 0


Query: 2   KNPKNKKKKKKIIPSPALGSTPATIVAKD---------------NV-TNAVDAVTEAL-- 61
           KN   KKKK+     P+   T +    KD               NV  N ++++ EA   
Sbjct: 4   KNQHKKKKKRSCAAKPSGDGTTSDGNKKDVEEERKDGEGKREIENVGKNFIESLMEAFCS 63

Query: 62  -----SVASLNDPSLPVSRQARVGLDEDVDSFDDLATTS--SSSSSAITASSS----SSS 121
                ++A+  +    +++ A + L + V+S DD +T+S  S SS   TAS+S     SS
Sbjct: 64  VSMEEAMAAYKEAGGDLNKAAEI-LSDLVESGDDPSTSSVASGSSGQETASTSEYGAGSS 123

Query: 122 WYSSEDVLDYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGK---- 179
              SED+   + + G KQ RV+A+TG +S+V+ KDY++ +     R +F   +R K    
Sbjct: 124 SSCSEDLTRDRWFKGSKQSRVIAATGMVSSVIAKDYLKPN---PVRKEFPMMERSKELCG 183

[Close]

BLAST of Chy11G199310 vs. TAIR 10
Match: AT5G58720.3 (smr (Small MutS Related) domain-containing protein )

HSP 1 Score: 75.5 bits (184), Expect = 5.2e-14
Identity = 76/215 (35.35%), Postives = 113/215 (52.56%), Query Frame = 0


Query: 2   KNPKNKKKKKKIIPSPALGSTPATIVAKD---------------NV-TNAVDAVTEAL-- 61
           KN   KKKK+     P+   T +    KD               NV  N ++++ EA   
Sbjct: 4   KNQHKKKKKRSCAAKPSGDGTTSDGNKKDVEEERKDGEGKREIENVGKNFIESLMEAFCS 63

Query: 62  -----SVASLNDPSLPVSRQARVGLDEDVDSFDDLATTS--SSSSSAITASSS----SSS 121
                ++A+  +    +++ A + L + V+S DD +T+S  S SS   TAS+S     SS
Sbjct: 64  VSMEEAMAAYKEAGGDLNKAAEI-LSDLVESGDDPSTSSVASGSSGQETASTSEYGAGSS 123

Query: 122 WYSSEDVLDYKGYMGKKQKRVVASTGTISTVLGKDYVRSSLKRDSRNKFMEFDRGK---- 179
              SED+   + + G KQ RV+A+TG +S+V+ KDY++ +     R +F   +R K    
Sbjct: 124 SSCSEDLTRDRWFKGSKQSRVIAATGMVSSVIAKDYLKPN---PVRKEFPMMERSKELCG 183

The following BLAST results are available for this feature:

BLAST of Chy11G199310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65573	7.3e-13	35.35	SMR domain-containing protein At5g58720 OS=Arabidopsis thaliana OX=3702 GN=PIPC ...	[more]

BLAST of Chy11G199310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFA5	5.5e-80	95.51	Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G185310 PE=4 SV...	[more]
A0A1S4E4I2	1.7e-73	90.45	SMR domain-containing protein At5g58720 isoform X1 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5D3CV78	1.7e-73	90.45	SMR domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S4E596	1.7e-73	90.45	SMR domain-containing protein At5g58720 isoform X3 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A1S4E4J9	1.7e-73	90.45	SMR domain-containing protein At5g58720 isoform X5 OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of Chy11G199310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031742718.1	6.15e-101	95.51	SMR domain-containing protein At5g58720 isoform X3 [Cucumis sativus]	[more]
XP_031742717.1	6.53e-101	95.51	SMR domain-containing protein At5g58720 isoform X2 [Cucumis sativus]	[more]
XP_004143157.1	3.26e-100	95.51	SMR domain-containing protein At5g58720 isoform X1 [Cucumis sativus] >KGN47082.1...	[more]
XP_016903147.1	1.17e-92	90.45	PREDICTED: SMR domain-containing protein At5g58720 isoform X5 [Cucumis melo]	[more]
XP_016903146.1	1.17e-92	90.45	PREDICTED: SMR domain-containing protein At5g58720 isoform X4 [Cucumis melo]	[more]

BLAST of Chy11G199310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58720.1	5.2e-14	35.35	smr (Small MutS Related) domain-containing protein	[more]
AT5G58720.2	5.2e-14	35.35	smr (Small MutS Related) domain-containing protein	[more]
AT5G58720.3	5.2e-14	35.35	smr (Small MutS Related) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..95
None	No IPR available	PANTHER	PTHR47676	OS01G0225100 PROTEIN	coord: 1..180
None	No IPR available	PANTHER	PTHR47676:SF1	OS01G0225100 PROTEIN	coord: 1..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G199310.1	Chy11G199310.1	mRNA