Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGATTCGAAGTTCTAGCAGTTCAAATACTGGATTGAGGCCAATAATTTCTACACTCAAGCATTGCCTACAACGACTCAAACGTCAAAATATCATTTCGTTTGCATCCATTGCACCATTTGATGACGACACTGTGCAGTCACATTACACGGCTTTGTGGAGAAAGTATGGAGATCTAATAGACTATGTCAACTTCCAGTTCTATGCCTATGGAAAAGGGACAACAGTTTCTCAGTTTTTGAATCATTTCGATACCCAAAGCTCTAATTACGAAGGTGGTAAAGTTCTAGCAAGCTTTGCAACAGATGGAAGTGGAGGTTTGACACCAGAAAAAGGGTTCTTCAAGGCATGCACCACCCTTCAAAGTAGGGGCAAACTTCATGGCATATTTGTTTGGTCAGCAGACGATTCGAAGAAGAACAATTTTCGTAATGAGATACAAGCACAAAACCTTTTGGCCAATGTGGAATGA
mRNA sequence
ATGAGGATTCGAAGTTCTAGCAGTTCAAATACTGGATTGAGGCCAATAATTTCTACACTCAAGCATTGCCTACAACGACTCAAACGTCAAAATATCATTTCGTTTGCATCCATTGCACCATTTGATGACGACACTGTGCAGTCACATTACACGGCTTTGTGGAGAAAGTATGGAGATCTAATAGACTATGTCAACTTCCAGTTCTATGCCTATGGAAAAGGGACAACAGTTTCTCAGTTTTTGAATCATTTCGATACCCAAAGCTCTAATTACGAAGGTGGTAAAGTTCTAGCAAGCTTTGCAACAGATGGAAGTGGAGGTTTGACACCAGAAAAAGGGTTCTTCAAGGCATGCACCACCCTTCAAAGTAGGGGCAAACTTCATGGCATATTTGTTTGGTCAGCAGACGATTCGAAGAAGAACAATTTTCGTAATGAGATACAAGCACAAAACCTTTTGGCCAATGTGGAATGA
Coding sequence (CDS)
ATGAGGATTCGAAGTTCTAGCAGTTCAAATACTGGATTGAGGCCAATAATTTCTACACTCAAGCATTGCCTACAACGACTCAAACGTCAAAATATCATTTCGTTTGCATCCATTGCACCATTTGATGACGACACTGTGCAGTCACATTACACGGCTTTGTGGAGAAAGTATGGAGATCTAATAGACTATGTCAACTTCCAGTTCTATGCCTATGGAAAAGGGACAACAGTTTCTCAGTTTTTGAATCATTTCGATACCCAAAGCTCTAATTACGAAGGTGGTAAAGTTCTAGCAAGCTTTGCAACAGATGGAAGTGGAGGTTTGACACCAGAAAAAGGGTTCTTCAAGGCATGCACCACCCTTCAAAGTAGGGGCAAACTTCATGGCATATTTGTTTGGTCAGCAGACGATTCGAAGAAGAACAATTTTCGTAATGAGATACAAGCACAAAACCTTTTGGCCAATGTGGAATGA
Protein sequence
MRIRSSSSSNTGLRPIISTLKHCLQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNFRNEIQAQNLLANVE*
Homology
BLAST of Chy11G198650 vs. ExPASy Swiss-Prot
Match:
Q9SLP4 (Chitinase 1 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1)
HSP 1 Score: 187.2 bits (474), Expect = 1.4e-46
Identity = 89/133 (66.92%), Postives = 106/133 (79.70%), Query Frame = 0
Query: 26 RLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFD 85
RLK+ ++SF SIAPFDD VQSHY ALW KYG IDYVNFQFYAY T+V QFL +F+
Sbjct: 170 RLKKNEVVSFVSIAPFDDAQVQSHYQALWEKYGHQIDYVNFQFYAYSARTSVEQFLKYFE 229
Query: 86 TQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNN--F 145
QSSNY GGKVL SF+TD SGGL P+ GFF+AC+ L+ +GKLHGIFVWSADDS +N F
Sbjct: 230 EQSSNYHGGKVLVSFSTDSSGGLKPDNGFFRACSILKKQGKLHGIFVWSADDSLMSNNVF 289
Query: 146 RNEIQAQNLLANV 157
R E+QAQ++LA+V
Sbjct: 290 RYEMQAQSMLASV 302
BLAST of Chy11G198650 vs. ExPASy Swiss-Prot
Match:
Q7M443 (Chitinase 2 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1)
HSP 1 Score: 177.2 bits (448), Expect = 1.5e-43
Identity = 85/132 (64.39%), Postives = 100/132 (75.76%), Query Frame = 0
Query: 26 RLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFD 85
RLK+ ++SF SIAPFDD VQSHY ALW KYG IDYVNFQFY Y +V QFL +F+
Sbjct: 144 RLKKNGVVSFVSIAPFDDAQVQSHYQALWEKYGHQIDYVNFQFYVYSSRMSVEQFLKYFE 203
Query: 86 TQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNN--F 145
Q SNY GGKVL SF+TD SGGL P GFF AC+ L+ +GKLHGIFVWSADDS +N F
Sbjct: 204 MQRSNYPGGKVLVSFSTDNSGGLKPRNGFFDACSILKKQGKLHGIFVWSADDSLMSNDVF 263
Query: 146 RNEIQAQNLLAN 156
+ E+QAQ+LLA+
Sbjct: 264 KYEMQAQSLLAS 275
BLAST of Chy11G198650 vs. ExPASy TrEMBL
Match:
A0A0A0KES2 (Glyco_hydro_18 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301040 PE=3 SV=1)
HSP 1 Score: 270.0 bits (689), Expect = 6.2e-69
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0
Query: 24 LQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 83
LQRLKRQNIISFASIAPFDDDTVQSHY ALWRKYGDLIDYVNFQFY+YG+GTTVSQFLNH
Sbjct: 171 LQRLKRQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGEGTTVSQFLNH 230
Query: 84 FDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 143
FD QSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF
Sbjct: 231 FDAQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 290
Query: 144 RNEIQAQNLLANVE 158
RNEIQAQNLLANVE
Sbjct: 291 RNEIQAQNLLANVE 304
BLAST of Chy11G198650 vs. ExPASy TrEMBL
Match:
A0A5D3CQZ2 (Chitinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00970 PE=3 SV=1)
HSP 1 Score: 263.8 bits (673), Expect = 4.5e-67
Identity = 127/134 (94.78%), Postives = 129/134 (96.27%), Query Frame = 0
Query: 24 LQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 83
LQRLK QNIISFASIAPFDDDTVQSHY ALWRKYGDLIDYVNFQFY+YGKGTTVSQFLNH
Sbjct: 173 LQRLKSQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTTVSQFLNH 232
Query: 84 FDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 143
FDTQSSNYEGGKVLASFATDGSGGL PEKGFFKAC TLQSRG+LHGIFVWSADDSKKNNF
Sbjct: 233 FDTQSSNYEGGKVLASFATDGSGGLKPEKGFFKACNTLQSRGELHGIFVWSADDSKKNNF 292
Query: 144 RNEIQAQNLLANVE 158
RNEIQAQNLLAN E
Sbjct: 293 RNEIQAQNLLANAE 306
BLAST of Chy11G198650 vs. ExPASy TrEMBL
Match:
A0A1S3CLR6 (chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103501894 PE=3 SV=1)
HSP 1 Score: 263.8 bits (673), Expect = 4.5e-67
Identity = 127/134 (94.78%), Postives = 129/134 (96.27%), Query Frame = 0
Query: 24 LQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 83
LQRLK QNIISFASIAPFDDDTVQSHY ALWRKYGDLIDYVNFQFY+YGKGTTVSQFLNH
Sbjct: 191 LQRLKSQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTTVSQFLNH 250
Query: 84 FDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 143
FDTQSSNYEGGKVLASFATDGSGGL PEKGFFKAC TLQSRG+LHGIFVWSADDSKKNNF
Sbjct: 251 FDTQSSNYEGGKVLASFATDGSGGLKPEKGFFKACNTLQSRGELHGIFVWSADDSKKNNF 310
Query: 144 RNEIQAQNLLANVE 158
RNEIQAQNLLAN E
Sbjct: 311 RNEIQAQNLLANAE 324
BLAST of Chy11G198650 vs. ExPASy TrEMBL
Match:
A0A6J1FUT9 (chitinase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111448631 PE=3 SV=1)
HSP 1 Score: 255.4 bits (651), Expect = 1.6e-64
Identity = 121/134 (90.30%), Postives = 127/134 (94.78%), Query Frame = 0
Query: 24 LQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 83
L RLKRQN+ISFASIAPFDDD VQ+HY ALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH
Sbjct: 190 LLRLKRQNVISFASIAPFDDDAVQTHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 249
Query: 84 FDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 143
F+TQ+SNY+GGKVLASFATDGSGGLTPEKGFFKAC TLQSRGKLHGIFVWSADDSKKN F
Sbjct: 250 FETQTSNYQGGKVLASFATDGSGGLTPEKGFFKACRTLQSRGKLHGIFVWSADDSKKNKF 309
Query: 144 RNEIQAQNLLANVE 158
NEIQAQNLLAN +
Sbjct: 310 HNEIQAQNLLANAD 323
BLAST of Chy11G198650 vs. ExPASy TrEMBL
Match:
A0A6J1JFC6 (chitinase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111484508 PE=3 SV=1)
HSP 1 Score: 254.6 bits (649), Expect = 2.7e-64
Identity = 121/134 (90.30%), Postives = 126/134 (94.03%), Query Frame = 0
Query: 24 LQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 83
L RLK QN+ISFASIAPFDDD VQSHY ALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH
Sbjct: 173 LLRLKHQNVISFASIAPFDDDAVQSHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 232
Query: 84 FDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 143
F+TQ+SNY+GGKVLASFATDGSGGLTPEKGFFKAC TLQSRGKLHGIFVWSADDSKKN F
Sbjct: 233 FETQTSNYQGGKVLASFATDGSGGLTPEKGFFKACRTLQSRGKLHGIFVWSADDSKKNKF 292
Query: 144 RNEIQAQNLLANVE 158
NEIQAQNLLAN +
Sbjct: 293 HNEIQAQNLLANTD 306
BLAST of Chy11G198650 vs. NCBI nr
Match:
XP_011657237.2 (chitinase 2 [Cucumis sativus] >KGN47334.1 hypothetical protein Csa_022924 [Cucumis sativus])
HSP 1 Score: 268 bits (684), Expect = 1.97e-87
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0
Query: 24 LQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 83
LQRLKRQNIISFASIAPFDDDTVQSHY ALWRKYGDLIDYVNFQFY+YG+GTTVSQFLNH
Sbjct: 171 LQRLKRQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGEGTTVSQFLNH 230
Query: 84 FDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 143
FD QSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF
Sbjct: 231 FDAQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 290
Query: 144 RNEIQAQNLLANVE 157
RNEIQAQNLLANVE
Sbjct: 291 RNEIQAQNLLANVE 304
BLAST of Chy11G198650 vs. NCBI nr
Match:
KAA0035279.1 (chitinase 2-like [Cucumis melo var. makuwa] >TYK14357.1 chitinase 2-like [Cucumis melo var. makuwa])
HSP 1 Score: 261 bits (668), Expect = 5.63e-85
Identity = 127/134 (94.78%), Postives = 129/134 (96.27%), Query Frame = 0
Query: 24 LQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 83
LQRLK QNIISFASIAPFDDDTVQSHY ALWRKYGDLIDYVNFQFY+YGKGTTVSQFLNH
Sbjct: 173 LQRLKSQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTTVSQFLNH 232
Query: 84 FDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 143
FDTQSSNYEGGKVLASFATDGSGGL PEKGFFKAC TLQSRG+LHGIFVWSADDSKKNNF
Sbjct: 233 FDTQSSNYEGGKVLASFATDGSGGLKPEKGFFKACNTLQSRGELHGIFVWSADDSKKNNF 292
Query: 144 RNEIQAQNLLANVE 157
RNEIQAQNLLAN E
Sbjct: 293 RNEIQAQNLLANAE 306
BLAST of Chy11G198650 vs. NCBI nr
Match:
XP_008463861.1 (PREDICTED: chitinase 2-like [Cucumis melo])
HSP 1 Score: 261 bits (668), Expect = 9.93e-85
Identity = 127/134 (94.78%), Postives = 129/134 (96.27%), Query Frame = 0
Query: 24 LQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 83
LQRLK QNIISFASIAPFDDDTVQSHY ALWRKYGDLIDYVNFQFY+YGKGTTVSQFLNH
Sbjct: 191 LQRLKSQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTTVSQFLNH 250
Query: 84 FDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 143
FDTQSSNYEGGKVLASFATDGSGGL PEKGFFKAC TLQSRG+LHGIFVWSADDSKKNNF
Sbjct: 251 FDTQSSNYEGGKVLASFATDGSGGLKPEKGFFKACNTLQSRGELHGIFVWSADDSKKNNF 310
Query: 144 RNEIQAQNLLANVE 157
RNEIQAQNLLAN E
Sbjct: 311 RNEIQAQNLLANAE 324
BLAST of Chy11G198650 vs. NCBI nr
Match:
KAG7010590.1 (hypothetical protein SDJN02_27384, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 253 bits (646), Expect = 1.05e-81
Identity = 121/134 (90.30%), Postives = 127/134 (94.78%), Query Frame = 0
Query: 24 LQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 83
L RLKRQN+ISFASIAPFDDD VQ+HY ALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH
Sbjct: 168 LLRLKRQNVISFASIAPFDDDAVQTHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 227
Query: 84 FDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 143
F+TQ+SNY+GGKVLASFATDGSGGLTPEKGFFKAC TLQSRGKLHGIFVWSADDSKKN F
Sbjct: 228 FETQTSNYQGGKVLASFATDGSGGLTPEKGFFKACRTLQSRGKLHGIFVWSADDSKKNKF 287
Query: 144 RNEIQAQNLLANVE 157
NEIQAQNLLAN +
Sbjct: 288 HNEIQAQNLLANAD 301
BLAST of Chy11G198650 vs. NCBI nr
Match:
XP_023511994.1 (chitinase 2-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 253 bits (646), Expect = 1.22e-81
Identity = 121/134 (90.30%), Postives = 127/134 (94.78%), Query Frame = 0
Query: 24 LQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 83
L RLKRQN+ISFASIAPFDDD VQSHY ALWRKYGDLIDYVNFQFYAYGKGTTVS+FLNH
Sbjct: 173 LLRLKRQNVISFASIAPFDDDAVQSHYLALWRKYGDLIDYVNFQFYAYGKGTTVSEFLNH 232
Query: 84 FDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 143
F+TQ+SNY+GGKVLASFATDGSGGLTPEKGFFKAC TLQSRGKLHGIFVWSADDSKKN F
Sbjct: 233 FETQTSNYQGGKVLASFATDGSGGLTPEKGFFKACKTLQSRGKLHGIFVWSADDSKKNKF 292
Query: 144 RNEIQAQNLLANVE 157
NEIQAQNLLAN +
Sbjct: 293 HNEIQAQNLLANAD 306
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SLP4 | 1.4e-46 | 66.92 | Chitinase 1 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1 | [more] |
Q7M443 | 1.5e-43 | 64.39 | Chitinase 2 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KES2 | 6.2e-69 | 97.01 | Glyco_hydro_18 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301... | [more] |
A0A5D3CQZ2 | 4.5e-67 | 94.78 | Chitinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G0097... | [more] |
A0A1S3CLR6 | 4.5e-67 | 94.78 | chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103501894 PE=3 SV=1 | [more] |
A0A6J1FUT9 | 1.6e-64 | 90.30 | chitinase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111448631 PE=3 SV=1 | [more] |
A0A6J1JFC6 | 2.7e-64 | 90.30 | chitinase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111484508 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_011657237.2 | 1.97e-87 | 97.01 | chitinase 2 [Cucumis sativus] >KGN47334.1 hypothetical protein Csa_022924 [Cucum... | [more] |
KAA0035279.1 | 5.63e-85 | 94.78 | chitinase 2-like [Cucumis melo var. makuwa] >TYK14357.1 chitinase 2-like [Cucumi... | [more] |
XP_008463861.1 | 9.93e-85 | 94.78 | PREDICTED: chitinase 2-like [Cucumis melo] | [more] |
KAG7010590.1 | 1.05e-81 | 90.30 | hypothetical protein SDJN02_27384, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_023511994.1 | 1.22e-81 | 90.30 | chitinase 2-like [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |