Chy11G198650 (gene) Cucumber (hystrix) v1

Overview
NameChy11G198650
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionGlyco_hydro_18 domain-containing protein
LocationchrH11: 19046427 .. 19046900 (+)
RNA-Seq ExpressionChy11G198650
SyntenyChy11G198650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGATTCGAAGTTCTAGCAGTTCAAATACTGGATTGAGGCCAATAATTTCTACACTCAAGCATTGCCTACAACGACTCAAACGTCAAAATATCATTTCGTTTGCATCCATTGCACCATTTGATGACGACACTGTGCAGTCACATTACACGGCTTTGTGGAGAAAGTATGGAGATCTAATAGACTATGTCAACTTCCAGTTCTATGCCTATGGAAAAGGGACAACAGTTTCTCAGTTTTTGAATCATTTCGATACCCAAAGCTCTAATTACGAAGGTGGTAAAGTTCTAGCAAGCTTTGCAACAGATGGAAGTGGAGGTTTGACACCAGAAAAAGGGTTCTTCAAGGCATGCACCACCCTTCAAAGTAGGGGCAAACTTCATGGCATATTTGTTTGGTCAGCAGACGATTCGAAGAAGAACAATTTTCGTAATGAGATACAAGCACAAAACCTTTTGGCCAATGTGGAATGA

mRNA sequence

ATGAGGATTCGAAGTTCTAGCAGTTCAAATACTGGATTGAGGCCAATAATTTCTACACTCAAGCATTGCCTACAACGACTCAAACGTCAAAATATCATTTCGTTTGCATCCATTGCACCATTTGATGACGACACTGTGCAGTCACATTACACGGCTTTGTGGAGAAAGTATGGAGATCTAATAGACTATGTCAACTTCCAGTTCTATGCCTATGGAAAAGGGACAACAGTTTCTCAGTTTTTGAATCATTTCGATACCCAAAGCTCTAATTACGAAGGTGGTAAAGTTCTAGCAAGCTTTGCAACAGATGGAAGTGGAGGTTTGACACCAGAAAAAGGGTTCTTCAAGGCATGCACCACCCTTCAAAGTAGGGGCAAACTTCATGGCATATTTGTTTGGTCAGCAGACGATTCGAAGAAGAACAATTTTCGTAATGAGATACAAGCACAAAACCTTTTGGCCAATGTGGAATGA

Coding sequence (CDS)

ATGAGGATTCGAAGTTCTAGCAGTTCAAATACTGGATTGAGGCCAATAATTTCTACACTCAAGCATTGCCTACAACGACTCAAACGTCAAAATATCATTTCGTTTGCATCCATTGCACCATTTGATGACGACACTGTGCAGTCACATTACACGGCTTTGTGGAGAAAGTATGGAGATCTAATAGACTATGTCAACTTCCAGTTCTATGCCTATGGAAAAGGGACAACAGTTTCTCAGTTTTTGAATCATTTCGATACCCAAAGCTCTAATTACGAAGGTGGTAAAGTTCTAGCAAGCTTTGCAACAGATGGAAGTGGAGGTTTGACACCAGAAAAAGGGTTCTTCAAGGCATGCACCACCCTTCAAAGTAGGGGCAAACTTCATGGCATATTTGTTTGGTCAGCAGACGATTCGAAGAAGAACAATTTTCGTAATGAGATACAAGCACAAAACCTTTTGGCCAATGTGGAATGA

Protein sequence

MRIRSSSSSNTGLRPIISTLKHCLQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNFRNEIQAQNLLANVE*
Homology
BLAST of Chy11G198650 vs. ExPASy Swiss-Prot
Match: Q9SLP4 (Chitinase 1 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-46
Identity = 89/133 (66.92%), Postives = 106/133 (79.70%), Query Frame = 0

Query: 26  RLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFD 85
           RLK+  ++SF SIAPFDD  VQSHY ALW KYG  IDYVNFQFYAY   T+V QFL +F+
Sbjct: 170 RLKKNEVVSFVSIAPFDDAQVQSHYQALWEKYGHQIDYVNFQFYAYSARTSVEQFLKYFE 229

Query: 86  TQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNN--F 145
            QSSNY GGKVL SF+TD SGGL P+ GFF+AC+ L+ +GKLHGIFVWSADDS  +N  F
Sbjct: 230 EQSSNYHGGKVLVSFSTDSSGGLKPDNGFFRACSILKKQGKLHGIFVWSADDSLMSNNVF 289

Query: 146 RNEIQAQNLLANV 157
           R E+QAQ++LA+V
Sbjct: 290 RYEMQAQSMLASV 302

BLAST of Chy11G198650 vs. ExPASy Swiss-Prot
Match: Q7M443 (Chitinase 2 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.5e-43
Identity = 85/132 (64.39%), Postives = 100/132 (75.76%), Query Frame = 0

Query: 26  RLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNHFD 85
           RLK+  ++SF SIAPFDD  VQSHY ALW KYG  IDYVNFQFY Y    +V QFL +F+
Sbjct: 144 RLKKNGVVSFVSIAPFDDAQVQSHYQALWEKYGHQIDYVNFQFYVYSSRMSVEQFLKYFE 203

Query: 86  TQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNN--F 145
            Q SNY GGKVL SF+TD SGGL P  GFF AC+ L+ +GKLHGIFVWSADDS  +N  F
Sbjct: 204 MQRSNYPGGKVLVSFSTDNSGGLKPRNGFFDACSILKKQGKLHGIFVWSADDSLMSNDVF 263

Query: 146 RNEIQAQNLLAN 156
           + E+QAQ+LLA+
Sbjct: 264 KYEMQAQSLLAS 275

BLAST of Chy11G198650 vs. ExPASy TrEMBL
Match: A0A0A0KES2 (Glyco_hydro_18 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301040 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 6.2e-69
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0

Query: 24  LQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 83
           LQRLKRQNIISFASIAPFDDDTVQSHY ALWRKYGDLIDYVNFQFY+YG+GTTVSQFLNH
Sbjct: 171 LQRLKRQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGEGTTVSQFLNH 230

Query: 84  FDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 143
           FD QSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF
Sbjct: 231 FDAQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 290

Query: 144 RNEIQAQNLLANVE 158
           RNEIQAQNLLANVE
Sbjct: 291 RNEIQAQNLLANVE 304

BLAST of Chy11G198650 vs. ExPASy TrEMBL
Match: A0A5D3CQZ2 (Chitinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00970 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.5e-67
Identity = 127/134 (94.78%), Postives = 129/134 (96.27%), Query Frame = 0

Query: 24  LQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 83
           LQRLK QNIISFASIAPFDDDTVQSHY ALWRKYGDLIDYVNFQFY+YGKGTTVSQFLNH
Sbjct: 173 LQRLKSQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTTVSQFLNH 232

Query: 84  FDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 143
           FDTQSSNYEGGKVLASFATDGSGGL PEKGFFKAC TLQSRG+LHGIFVWSADDSKKNNF
Sbjct: 233 FDTQSSNYEGGKVLASFATDGSGGLKPEKGFFKACNTLQSRGELHGIFVWSADDSKKNNF 292

Query: 144 RNEIQAQNLLANVE 158
           RNEIQAQNLLAN E
Sbjct: 293 RNEIQAQNLLANAE 306

BLAST of Chy11G198650 vs. ExPASy TrEMBL
Match: A0A1S3CLR6 (chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103501894 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.5e-67
Identity = 127/134 (94.78%), Postives = 129/134 (96.27%), Query Frame = 0

Query: 24  LQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 83
           LQRLK QNIISFASIAPFDDDTVQSHY ALWRKYGDLIDYVNFQFY+YGKGTTVSQFLNH
Sbjct: 191 LQRLKSQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTTVSQFLNH 250

Query: 84  FDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 143
           FDTQSSNYEGGKVLASFATDGSGGL PEKGFFKAC TLQSRG+LHGIFVWSADDSKKNNF
Sbjct: 251 FDTQSSNYEGGKVLASFATDGSGGLKPEKGFFKACNTLQSRGELHGIFVWSADDSKKNNF 310

Query: 144 RNEIQAQNLLANVE 158
           RNEIQAQNLLAN E
Sbjct: 311 RNEIQAQNLLANAE 324

BLAST of Chy11G198650 vs. ExPASy TrEMBL
Match: A0A6J1FUT9 (chitinase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111448631 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.6e-64
Identity = 121/134 (90.30%), Postives = 127/134 (94.78%), Query Frame = 0

Query: 24  LQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 83
           L RLKRQN+ISFASIAPFDDD VQ+HY ALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH
Sbjct: 190 LLRLKRQNVISFASIAPFDDDAVQTHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 249

Query: 84  FDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 143
           F+TQ+SNY+GGKVLASFATDGSGGLTPEKGFFKAC TLQSRGKLHGIFVWSADDSKKN F
Sbjct: 250 FETQTSNYQGGKVLASFATDGSGGLTPEKGFFKACRTLQSRGKLHGIFVWSADDSKKNKF 309

Query: 144 RNEIQAQNLLANVE 158
            NEIQAQNLLAN +
Sbjct: 310 HNEIQAQNLLANAD 323

BLAST of Chy11G198650 vs. ExPASy TrEMBL
Match: A0A6J1JFC6 (chitinase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111484508 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.7e-64
Identity = 121/134 (90.30%), Postives = 126/134 (94.03%), Query Frame = 0

Query: 24  LQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 83
           L RLK QN+ISFASIAPFDDD VQSHY ALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH
Sbjct: 173 LLRLKHQNVISFASIAPFDDDAVQSHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 232

Query: 84  FDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 143
           F+TQ+SNY+GGKVLASFATDGSGGLTPEKGFFKAC TLQSRGKLHGIFVWSADDSKKN F
Sbjct: 233 FETQTSNYQGGKVLASFATDGSGGLTPEKGFFKACRTLQSRGKLHGIFVWSADDSKKNKF 292

Query: 144 RNEIQAQNLLANVE 158
            NEIQAQNLLAN +
Sbjct: 293 HNEIQAQNLLANTD 306

BLAST of Chy11G198650 vs. NCBI nr
Match: XP_011657237.2 (chitinase 2 [Cucumis sativus] >KGN47334.1 hypothetical protein Csa_022924 [Cucumis sativus])

HSP 1 Score: 268 bits (684), Expect = 1.97e-87
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 0

Query: 24  LQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 83
           LQRLKRQNIISFASIAPFDDDTVQSHY ALWRKYGDLIDYVNFQFY+YG+GTTVSQFLNH
Sbjct: 171 LQRLKRQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGEGTTVSQFLNH 230

Query: 84  FDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 143
           FD QSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF
Sbjct: 231 FDAQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 290

Query: 144 RNEIQAQNLLANVE 157
           RNEIQAQNLLANVE
Sbjct: 291 RNEIQAQNLLANVE 304

BLAST of Chy11G198650 vs. NCBI nr
Match: KAA0035279.1 (chitinase 2-like [Cucumis melo var. makuwa] >TYK14357.1 chitinase 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 261 bits (668), Expect = 5.63e-85
Identity = 127/134 (94.78%), Postives = 129/134 (96.27%), Query Frame = 0

Query: 24  LQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 83
           LQRLK QNIISFASIAPFDDDTVQSHY ALWRKYGDLIDYVNFQFY+YGKGTTVSQFLNH
Sbjct: 173 LQRLKSQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTTVSQFLNH 232

Query: 84  FDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 143
           FDTQSSNYEGGKVLASFATDGSGGL PEKGFFKAC TLQSRG+LHGIFVWSADDSKKNNF
Sbjct: 233 FDTQSSNYEGGKVLASFATDGSGGLKPEKGFFKACNTLQSRGELHGIFVWSADDSKKNNF 292

Query: 144 RNEIQAQNLLANVE 157
           RNEIQAQNLLAN E
Sbjct: 293 RNEIQAQNLLANAE 306

BLAST of Chy11G198650 vs. NCBI nr
Match: XP_008463861.1 (PREDICTED: chitinase 2-like [Cucumis melo])

HSP 1 Score: 261 bits (668), Expect = 9.93e-85
Identity = 127/134 (94.78%), Postives = 129/134 (96.27%), Query Frame = 0

Query: 24  LQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 83
           LQRLK QNIISFASIAPFDDDTVQSHY ALWRKYGDLIDYVNFQFY+YGKGTTVSQFLNH
Sbjct: 191 LQRLKSQNIISFASIAPFDDDTVQSHYMALWRKYGDLIDYVNFQFYSYGKGTTVSQFLNH 250

Query: 84  FDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 143
           FDTQSSNYEGGKVLASFATDGSGGL PEKGFFKAC TLQSRG+LHGIFVWSADDSKKNNF
Sbjct: 251 FDTQSSNYEGGKVLASFATDGSGGLKPEKGFFKACNTLQSRGELHGIFVWSADDSKKNNF 310

Query: 144 RNEIQAQNLLANVE 157
           RNEIQAQNLLAN E
Sbjct: 311 RNEIQAQNLLANAE 324

BLAST of Chy11G198650 vs. NCBI nr
Match: KAG7010590.1 (hypothetical protein SDJN02_27384, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 253 bits (646), Expect = 1.05e-81
Identity = 121/134 (90.30%), Postives = 127/134 (94.78%), Query Frame = 0

Query: 24  LQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 83
           L RLKRQN+ISFASIAPFDDD VQ+HY ALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH
Sbjct: 168 LLRLKRQNVISFASIAPFDDDAVQTHYLALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 227

Query: 84  FDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 143
           F+TQ+SNY+GGKVLASFATDGSGGLTPEKGFFKAC TLQSRGKLHGIFVWSADDSKKN F
Sbjct: 228 FETQTSNYQGGKVLASFATDGSGGLTPEKGFFKACRTLQSRGKLHGIFVWSADDSKKNKF 287

Query: 144 RNEIQAQNLLANVE 157
            NEIQAQNLLAN +
Sbjct: 288 HNEIQAQNLLANAD 301

BLAST of Chy11G198650 vs. NCBI nr
Match: XP_023511994.1 (chitinase 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253 bits (646), Expect = 1.22e-81
Identity = 121/134 (90.30%), Postives = 127/134 (94.78%), Query Frame = 0

Query: 24  LQRLKRQNIISFASIAPFDDDTVQSHYTALWRKYGDLIDYVNFQFYAYGKGTTVSQFLNH 83
           L RLKRQN+ISFASIAPFDDD VQSHY ALWRKYGDLIDYVNFQFYAYGKGTTVS+FLNH
Sbjct: 173 LLRLKRQNVISFASIAPFDDDAVQSHYLALWRKYGDLIDYVNFQFYAYGKGTTVSEFLNH 232

Query: 84  FDTQSSNYEGGKVLASFATDGSGGLTPEKGFFKACTTLQSRGKLHGIFVWSADDSKKNNF 143
           F+TQ+SNY+GGKVLASFATDGSGGLTPEKGFFKAC TLQSRGKLHGIFVWSADDSKKN F
Sbjct: 233 FETQTSNYQGGKVLASFATDGSGGLTPEKGFFKACKTLQSRGKLHGIFVWSADDSKKNKF 292

Query: 144 RNEIQAQNLLANVE 157
            NEIQAQNLLAN +
Sbjct: 293 HNEIQAQNLLANAD 306

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SLP41.4e-4666.92Chitinase 1 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1[more]
Q7M4431.5e-4364.39Chitinase 2 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KES26.2e-6997.01Glyco_hydro_18 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301... [more]
A0A5D3CQZ24.5e-6794.78Chitinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G0097... [more]
A0A1S3CLR64.5e-6794.78chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103501894 PE=3 SV=1[more]
A0A6J1FUT91.6e-6490.30chitinase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111448631 PE=3 SV=1[more]
A0A6J1JFC62.7e-6490.30chitinase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111484508 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
XP_011657237.21.97e-8797.01chitinase 2 [Cucumis sativus] >KGN47334.1 hypothetical protein Csa_022924 [Cucum... [more]
KAA0035279.15.63e-8594.78chitinase 2-like [Cucumis melo var. makuwa] >TYK14357.1 chitinase 2-like [Cucumi... [more]
XP_008463861.19.93e-8594.78PREDICTED: chitinase 2-like [Cucumis melo][more]
KAG7010590.11.05e-8190.30hypothetical protein SDJN02_27384, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023511994.11.22e-8190.30chitinase 2-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.20.80Glycosidasescoord: 7..156
e-value: 5.0E-38
score: 133.1
NoneNo IPR availablePANTHERPTHR46476CHITINASE 2-LIKEcoord: 22..156
NoneNo IPR availablePANTHERPTHR46476:SF3CHITINASE 2coord: 22..156
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 16..148

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy11G198650.1Chy11G198650.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds