Chy11G198520 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G198520
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RING-type E3 ubiquitin transferase
Location	chrH11: 18932987 .. 18933607 (-)
RNA-Seq Expression	Chy11G198520
Synteny	Chy11G198520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATCGAGTCCGCCTCCGCCATCTCCGGTGCCTGATTACTCTAGCTGGAGTCCATGGTCAATCTCGACCATCGTCGTCGTATGCATCGTCTTCCTACTGTTGAGCAACTATAGACTTTTGAAACAATTGTGCCGTGTCCTTCATGGACTGTTTACCGGTCGACCTACGGTCCAATTTGAGGAAAACCCTAACAATCCTTCACTACAAATCCATGGCCATGGACTGGAGACCTCGATGATTCGTTTGCTACCTATATCACAGTTCAAAAAGAATGAAGAATCCGAATCAACGACAAGTTTCAATACGGAATGCGCTGTTTGTTTGGGGGAATTCGAAGAAGGGGAATTGATTAAACACTTACCGAATTGTAATCATTCGTTTCATAGTCCTTGTATCGATGCCTGGTTCCGTAATCATTCGAGTTGCCCTCTCTGCAGATTGCAAGTCTTGAGTTTCTCTACTCCCGATTCTTCTTCAGCAATGCTGGAAACGCTTGGAAGAGAAAATGTTCTACGAGAAAGAGTAGCGCATTATCAAACACTTCGTGCTCAAATTCTGCAGCACCCTGAATTCAGAAGAGATGCATCGATTCAAGGATCAGACCAACGAAACCGATGA

mRNA sequence

ATGCCATCGAGTCCGCCTCCGCCATCTCCGGTGCCTGATTACTCTAGCTGGAGTCCATGGTCAATCTCGACCATCGTCGTCGTATGCATCGTCTTCCTACTGTTGAGCAACTATAGACTTTTGAAACAATTGTGCCGTGTCCTTCATGGACTGTTTACCGGTCGACCTACGGTCCAATTTGAGGAAAACCCTAACAATCCTTCACTACAAATCCATGGCCATGGACTGGAGACCTCGATGATTCGTTTGCTACCTATATCACAGTTCAAAAAGAATGAAGAATCCGAATCAACGACAAGTTTCAATACGGAATGCGCTGTTTGTTTGGGGGAATTCGAAGAAGGGGAATTGATTAAACACTTACCGAATTGTAATCATTCGTTTCATAGTCCTTGTATCGATGCCTGGTTCCGTAATCATTCGAGTTGCCCTCTCTGCAGATTGCAAGTCTTGAGTTTCTCTACTCCCGATTCTTCTTCAGCAATGCTGGAAACGCTTGGAAGAGAAAATGTTCTACGAGAAAGAGTAGCGCATTATCAAACACTTCGTGCTCAAATTCTGCAGCACCCTGAATTCAGAAGAGATGCATCGATTCAAGGATCAGACCAACGAAACCGATGA

Coding sequence (CDS)

ATGCCATCGAGTCCGCCTCCGCCATCTCCGGTGCCTGATTACTCTAGCTGGAGTCCATGGTCAATCTCGACCATCGTCGTCGTATGCATCGTCTTCCTACTGTTGAGCAACTATAGACTTTTGAAACAATTGTGCCGTGTCCTTCATGGACTGTTTACCGGTCGACCTACGGTCCAATTTGAGGAAAACCCTAACAATCCTTCACTACAAATCCATGGCCATGGACTGGAGACCTCGATGATTCGTTTGCTACCTATATCACAGTTCAAAAAGAATGAAGAATCCGAATCAACGACAAGTTTCAATACGGAATGCGCTGTTTGTTTGGGGGAATTCGAAGAAGGGGAATTGATTAAACACTTACCGAATTGTAATCATTCGTTTCATAGTCCTTGTATCGATGCCTGGTTCCGTAATCATTCGAGTTGCCCTCTCTGCAGATTGCAAGTCTTGAGTTTCTCTACTCCCGATTCTTCTTCAGCAATGCTGGAAACGCTTGGAAGAGAAAATGTTCTACGAGAAAGAGTAGCGCATTATCAAACACTTCGTGCTCAAATTCTGCAGCACCCTGAATTCAGAAGAGATGCATCGATTCAAGGATCAGACCAACGAAACCGATGA

Protein sequence

MPSSPPPPSPVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQFEENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKHLPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPDSSSAMLETLGRENVLRERVAHYQTLRAQILQHPEFRRDASIQGSDQRNR*

Homology

[Close]

BLAST of Chy11G198520 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.0e-20
Identity = 58/166 (34.94%), Postives = 88/166 (53.01%), Query Frame = 0


Query: 5   PPPPSPVPD------YSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTV 64
           PPPPS   D       SS+SP  I+ I ++    +L+S Y L+ + C   H   +   T+
Sbjct: 36  PPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCH-RHHQTSSSETL 95

Query: 65  QFEEN-----PNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFE 124
               N      +   +  +G GL  SMI+ + + ++K  +         ++C+VCL EFE
Sbjct: 96  NLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVD----GSDCSVCLSEFE 155

Query: 125 EGELIKHLPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPDSS 160
           E E ++ LP CNH+FH PCID W ++HS+CPLCR  V   + P +S
Sbjct: 156 ENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTAS 196

[Close]

BLAST of Chy11G198520 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.2e-18
Identity = 65/195 (33.33%), Postives = 101/195 (51.79%), Query Frame = 0


Query: 5   PPPPSPV-----PDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGL-FTGRPTV 64
           PPPP P+        +S+   +++ I ++   FLL+S Y  + + C   H +   GR ++
Sbjct: 17  PPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSL 76

Query: 65  -QFEENPNNP----SLQIHGHGLETSMIRLLPISQFKK----------NEESESTTSFNT 124
            +   N  +P    S ++   GL+ S+IR +PI +FKK           E  E     + 
Sbjct: 77  SRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQ 136

Query: 125 ECAVCLGEFEEGELIKHLPNCNHSFHSPCIDAWFRNHSSCPLCRLQV---LSF-----ST 171
           EC+VCL EF++ E ++ +PNC+H FH  CID W +N+++CPLCR +V    SF     S 
Sbjct: 137 ECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSA 196

[Close]

BLAST of Chy11G198520 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 8.2e-18
Identity = 61/191 (31.94%), Postives = 98/191 (51.31%), Query Frame = 0


Query: 5   PPPPSPVPD------YSSWSPWSISTIVVVCIVFLLLSNYRLLKQLC-RVLHGL------ 64
           PPPPS   D       S +SP  I+ I ++   F+L+S Y L+ + C R  H        
Sbjct: 38  PPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAA 97

Query: 65  --------FTGRPTVQFEEN-PNNPSLQI---HGHGLETSMIRLLPISQFKKNEESESTT 124
                   +T + T     N   NP+  I    G GL+ S+I+ + + +++K +      
Sbjct: 98  AINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVE-- 157

Query: 125 SFNTECAVCLGEFEEGELIKHLPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPDSS 171
             +++C+VCL EF+E E ++ LP CNH+FH PCID W ++HS+CPLCR  +++ S  +  
Sbjct: 158 --SSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIV 217

[Close]

BLAST of Chy11G198520 vs. ExPASy Swiss-Prot
Match: Q9LX93 (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.3e-17
Identity = 65/197 (32.99%), Postives = 88/197 (44.67%), Query Frame = 0


Query: 2   PSSPPPPSPVPDYSSWSPWSISTI-VVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQF 61
           P  PPPP P  + S   P SI  +  ++  +FL+   Y  + Q  R+     T   T Q 
Sbjct: 26  PPPPPPPPPPRELSLLLPTSICVVGSIILFLFLVFFLYLHITQQRRISAASVTPGDTNQQ 85

Query: 62  EENPNNPS---------LQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGE 121
           E+                QI   GL  S I  + +  FKK E         TEC+VCL E
Sbjct: 86  EDEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGIID----GTECSVCLNE 145

Query: 122 FEEGELIKHLPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTP----------DSSSA 179
           FEE E ++ LP C+H+FH  CID W  +H +CPLCR  VL  + P            S +
Sbjct: 146 FEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEPPHQETETNHQPDSES 205

[Close]

BLAST of Chy11G198520 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 9.1e-17
Identity = 58/168 (34.52%), Postives = 84/168 (50.00%), Query Frame = 0


Query: 6   PPPSPVPDYSSWSP--------------WSISTIVVVCIVFLLLSNYRLLKQLCRVLHGL 65
           PPP P P  +  SP               +I+ I ++   FLL+S Y  + + C   H +
Sbjct: 16  PPPPPPPSTTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQI 75

Query: 66  FTGRPTVQFEENPNNPSLQIHGH----GLETSMIRLLPISQFKK-----NEESESTTSFN 125
              R   +   +  NP +    H    GL+ S IR +P+ +FKK      EE +S  S  
Sbjct: 76  DIFRR--RRRSSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNS-- 135

Query: 126 TECAVCLGEFEEGELIKHLPNCNHSFHSPCIDAWFRNHSSCPLCRLQV 151
            EC+VCL EF+E E ++ +PNC H FH  CID W + +++CPLCR  V
Sbjct: 136 QECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 179

[Close]

BLAST of Chy11G198520 vs. ExPASy TrEMBL
Match: A0A0A0KCA5 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G303210 PE=3 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 4.1e-113
Identity = 205/207 (99.03%), Postives = 206/207 (99.52%), Query Frame = 0


Query: 1   MPSSPPPPSPVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQF 60
           MPSSPPPPSPVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQF
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQF 60

Query: 61  EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH 120
           EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH
Sbjct: 61  EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH 120

Query: 121 LPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPD-SSSAMLETLGRENVLRERVAHY 180
           LPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPD SSSAMLETLGRENVLRERVAHY
Sbjct: 121 LPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPDSSSSAMLETLGRENVLRERVAHY 180

Query: 181 QTLRAQILQHPEFRRDASIQGSDQRNR 207
           QTLRAQILQHPEFRRDASIQG+DQRNR
Sbjct: 181 QTLRAQILQHPEFRRDASIQGTDQRNR 207

[Close]

BLAST of Chy11G198520 vs. ExPASy TrEMBL
Match: A0A5A7V3S2 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00390 PE=3 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 2.9e-106
Identity = 190/205 (92.68%), Postives = 198/205 (96.59%), Query Frame = 0


Query: 1   MPSSPPPPSPVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQF 60
           MPSSPPPPSPVPDYSSWSPWSISTIV+VC++FLLLSNYRLLKQLCRVLH LF+GRP VQF
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF 60

Query: 61  EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH 120
           EENPNNPSLQIH HGLETSMIRLLPISQFKK EESESTTSFNTECAVCLGEFEEGELIK+
Sbjct: 61  EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN 120

Query: 121 LPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPDSSSAMLETLGRENVLRERVAHYQ 180
           LPNCNHSFHS CIDAWFR+HSSCPLCRLQV SFSTPDSSSAMLETLGREN+LRERVAHYQ
Sbjct: 121 LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSSAMLETLGRENILRERVAHYQ 180

Query: 181 TLRAQILQHPEFRRDASIQGSDQRN 206
           TLRAQILQHPEFRRD SIQGSDQR+
Sbjct: 181 TLRAQILQHPEFRRDESIQGSDQRD 205

[Close]

BLAST of Chy11G198520 vs. ExPASy TrEMBL
Match: A0A1S3BIX6 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103490579 PE=3 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 2.9e-106
Identity = 190/205 (92.68%), Postives = 198/205 (96.59%), Query Frame = 0


Query: 1   MPSSPPPPSPVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQF 60
           MPSSPPPPSPVPDYSSWSPWSISTIV+VC++FLLLSNYRLLKQLCRVLH LF+GRP VQF
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF 60

Query: 61  EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH 120
           EENPNNPSLQIH HGLETSMIRLLPISQFKK EESESTTSFNTECAVCLGEFEEGELIK+
Sbjct: 61  EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN 120

Query: 121 LPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPDSSSAMLETLGRENVLRERVAHYQ 180
           LPNCNHSFHS CIDAWFR+HSSCPLCRLQV SFSTPDSSSAMLETLGREN+LRERVAHYQ
Sbjct: 121 LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSSAMLETLGRENILRERVAHYQ 180

Query: 181 TLRAQILQHPEFRRDASIQGSDQRN 206
           TLRAQILQHPEFRRD SIQGSDQR+
Sbjct: 181 TLRAQILQHPEFRRDESIQGSDQRD 205

[Close]

BLAST of Chy11G198520 vs. ExPASy TrEMBL
Match: A0A6A6KKG1 (RING-type E3 ubiquitin transferase OS=Hevea brasiliensis OX=3981 GN=GH714_013318 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 2.1e-40
Identity = 100/198 (50.51%), Postives = 126/198 (63.64%), Query Frame = 0


Query: 1   MPSSPPPPS--PVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTV 60
           MP SP P +   + +   W+P+ I  +V VC   ++ S YR+LK+LC  L+ L   R   
Sbjct: 1   MPLSPTPAAQHQLENSPEWNPYVIGPVVAVCTFIVMFSYYRILKRLCCSLNTLTFSRNRF 60

Query: 61  QF----EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEE 120
           Q     E +  + SLQ   HGLE++++  LPISQFKK +E ES TS N+ECAVCLGEFEE
Sbjct: 61  QMRRIGENSLGDSSLQYFSHGLESAIMCSLPISQFKKEKEEESRTS-NSECAVCLGEFEE 120

Query: 121 GELIKHLPNCNHSFHSPCIDAWFRNHSSCPLCRLQV--LSFSTPDSSSAMLETLGRENVL 180
           GE +KHLP C H FH  CID WF+ HS+CPLCR QV  LS     S S +LETL RE+ L
Sbjct: 121 GEWLKHLPICAHVFHVACIDTWFQTHSNCPLCRSQVYDLSHEYSISVSILLETLRREDFL 180

Query: 181 RERVAHYQTLRAQILQHP 191
            ER  HYQ LR +IL +P
Sbjct: 181 HERAKHYQILRPEILGNP 197

[Close]

BLAST of Chy11G198520 vs. ExPASy TrEMBL
Match: A0A2C9W1B6 (RING-type E3 ubiquitin transferase OS=Manihot esculenta OX=3983 GN=MANES_04G030200 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 3.6e-40
Identity = 95/197 (48.22%), Postives = 125/197 (63.45%), Query Frame = 0


Query: 1   MPSSPPPPSP--VPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTV 60
           MP SP P +P  + +YS W+ + I  ++ VC   +L S YR+L++LC  L+     R   
Sbjct: 1   MPPSPTPEAPLRLENYSQWNAYVIGPVIAVCSSVVLFSYYRMLRRLCCTLNTQTLPRNRA 60

Query: 61  QF----EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEE 120
           Q     + N  + SLQ + HGLE++++R LPISQFKK EESE++   N ECAVCLGEFEE
Sbjct: 61  QMSRINQNNLEDSSLQNYSHGLESNIMRSLPISQFKKEEESEAS---NRECAVCLGEFEE 120

Query: 121 GELIKHLPNCNHSFHSPCIDAWFRNHSSCPLCRLQV--LSFSTPDSSSAMLETLGRENVL 180
           GE +KHLPNC H FH  CID WF+ HS+CPLCR  V  L      S   +L TL RE+  
Sbjct: 121 GEWLKHLPNCAHVFHVACIDTWFQTHSNCPLCRSHVYDLCHEYSISMDTLLHTLRREDFF 180

Query: 181 RERVAHYQTLRAQILQH 190
            ER  HYQ LR++IL++
Sbjct: 181 NERAEHYQNLRSEILRN 194

[Close]

BLAST of Chy11G198520 vs. NCBI nr
Match: XP_031743630.1 (RING-H2 finger protein ATL52-like [Cucumis sativus] >KGN47355.1 hypothetical protein Csa_023057 [Cucumis sativus])

HSP 1 Score: 413 bits (1062), Expect = 1.45e-145
Identity = 205/207 (99.03%), Postives = 206/207 (99.52%), Query Frame = 0


Query: 1   MPSSPPPPSPVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQF 60
           MPSSPPPPSPVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQF
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQF 60

Query: 61  EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH 120
           EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH
Sbjct: 61  EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH 120

Query: 121 LPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPDSSS-AMLETLGRENVLRERVAHY 180
           LPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPDSSS AMLETLGRENVLRERVAHY
Sbjct: 121 LPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPDSSSSAMLETLGRENVLRERVAHY 180

Query: 181 QTLRAQILQHPEFRRDASIQGSDQRNR 206
           QTLRAQILQHPEFRRDASIQG+DQRNR
Sbjct: 181 QTLRAQILQHPEFRRDASIQGTDQRNR 207

[Close]

BLAST of Chy11G198520 vs. NCBI nr
Match: XP_008448367.1 (PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo] >KAA0061954.1 RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa] >TYK23976.1 RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa])

HSP 1 Score: 391 bits (1004), Expect = 1.04e-136
Identity = 190/205 (92.68%), Postives = 198/205 (96.59%), Query Frame = 0


Query: 1   MPSSPPPPSPVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQF 60
           MPSSPPPPSPVPDYSSWSPWSISTIV+VC++FLLLSNYRLLKQLCRVLH LF+GRP VQF
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF 60

Query: 61  EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH 120
           EENPNNPSLQIH HGLETSMIRLLPISQFKK EESESTTSFNTECAVCLGEFEEGELIK+
Sbjct: 61  EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN 120

Query: 121 LPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPDSSSAMLETLGRENVLRERVAHYQ 180
           LPNCNHSFHS CIDAWFR+HSSCPLCRLQV SFSTPDSSSAMLETLGREN+LRERVAHYQ
Sbjct: 121 LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSSAMLETLGRENILRERVAHYQ 180

Query: 181 TLRAQILQHPEFRRDASIQGSDQRN 205
           TLRAQILQHPEFRRD SIQGSDQR+
Sbjct: 181 TLRAQILQHPEFRRDESIQGSDQRD 205

[Close]

BLAST of Chy11G198520 vs. NCBI nr
Match: KAG6570731.1 (RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010575.1 RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 338 bits (867), Expect = 9.44e-116
Identity = 171/213 (80.28%), Postives = 186/213 (87.32%), Query Frame = 0


Query: 1   MPSSPPPP---SPVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPT 60
           MPSSPPPP   SPVPDYSSWSPWSIS I +VCIV LLLSNYR+LK+ CRVLHGLF GR  
Sbjct: 1   MPSSPPPPPPPSPVPDYSSWSPWSISIIAIVCIVVLLLSNYRILKRWCRVLHGLFCGRFV 60

Query: 61  VQFEENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGEL 120
           VQF+ENPN+PS ++H HGLE S IRLLPISQFKKNEE+EST S NTECAVCLGEFEEGEL
Sbjct: 61  VQFDENPNDPSPEVHVHGLEASTIRLLPISQFKKNEEAESTASINTECAVCLGEFEEGEL 120

Query: 121 IKHLPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFS----TPDSSSAMLETLGRENVLR 180
           IK+LPNCNHSFHS CIDAW RNHSSCPLCRL V + S    TPDSSSAMLETLGRE+V R
Sbjct: 121 IKNLPNCNHSFHSSCIDAWLRNHSSCPLCRLHVSNLSIDCPTPDSSSAMLETLGREDVER 180

Query: 181 ERVAHYQTLRAQILQHPEFRRDASIQGSDQRNR 206
           ERV++YQTLRAQILQ+PE RRDAS+QGSDQRNR
Sbjct: 181 ERVSYYQTLRAQILQNPELRRDASVQGSDQRNR 213

[Close]

BLAST of Chy11G198520 vs. NCBI nr
Match: XP_023512261.1 (RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332 bits (852), Expect = 1.82e-113
Identity = 168/213 (78.87%), Postives = 183/213 (85.92%), Query Frame = 0


Query: 1   MPSSPPPP---SPVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPT 60
           MPSSPPPP   SPVPDYSSWSPWSIS I +VCIV LLLSNYR+LK+ CRV HGLF GR  
Sbjct: 1   MPSSPPPPPPPSPVPDYSSWSPWSISIIAIVCIVVLLLSNYRILKRWCRVFHGLFCGRSV 60

Query: 61  VQFEENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGEL 120
           VQF+ENPN+PS Q+H HGLE S IRLLPISQFKKNEE+EST S NTECAVCLGEFEEGEL
Sbjct: 61  VQFDENPNDPSPQVHVHGLEASTIRLLPISQFKKNEEAESTASINTECAVCLGEFEEGEL 120

Query: 121 IKHLPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFS----TPDSSSAMLETLGRENVLR 180
           IK+LPNCNHSFHS CIDAW RNHSSCPLCRL V + S    TPDSSSAMLETL RE+V  
Sbjct: 121 IKNLPNCNHSFHSSCIDAWLRNHSSCPLCRLHVSNLSIDCPTPDSSSAMLETLSREDVDG 180

Query: 181 ERVAHYQTLRAQILQHPEFRRDASIQGSDQRNR 206
           ERV++YQTLRAQILQ+P+ RRDAS+QGSDQRNR
Sbjct: 181 ERVSYYQTLRAQILQNPDLRRDASVQGSDQRNR 213

[Close]

BLAST of Chy11G198520 vs. NCBI nr
Match: XP_031247518.1 (RING-H2 finger protein ATL16-like [Pistacia vera])

HSP 1 Score: 180 bits (457), Expect = 1.35e-53
Identity = 96/194 (49.48%), Postives = 118/194 (60.82%), Query Frame = 0


Query: 8   PSPVPDYS--SWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQF----E 67
           PSP P Y   SW+P  +S + + C +FLL S Y  LK+LC         R   Q     E
Sbjct: 5   PSPAPIYKPPSWNPLVVSLVALTCTIFLLFSYYNYLKKLCCCAFNRGNSRNPDQRQLLNE 64

Query: 68  ENPNNPSLQIHGHGLETSMIRLLPISQFKKN---EESESTTSFNTECAVCLGEFEEGELI 127
            N ++PSLQ + HGLE+S+I  LPI+QFKKN   EE E     N+EC VCLGEFEEGE +
Sbjct: 65  ANFDDPSLQFNSHGLESSIIHSLPITQFKKNINKEEEEELQPRNSECGVCLGEFEEGEWL 124

Query: 128 KHLPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPDSSSA----MLETLGRENVLRE 187
           KHLPNC+H+FH PCID WF +HS+CPLCR Q    + P   S     +LE L RE+   E
Sbjct: 125 KHLPNCSHAFHIPCIDTWFHSHSNCPLCRSQAFDLTIPHECSVSMYTLLENLRREDFFHE 184

[Close]

BLAST of Chy11G198520 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 101.7 bits (252), Expect = 7.4e-22
Identity = 58/166 (34.94%), Postives = 88/166 (53.01%), Query Frame = 0


Query: 5   PPPPSPVPD------YSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTV 64
           PPPPS   D       SS+SP  I+ I ++    +L+S Y L+ + C   H   +   T+
Sbjct: 36  PPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCH-RHHQTSSSETL 95

Query: 65  QFEEN-----PNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFE 124
               N      +   +  +G GL  SMI+ + + ++K  +         ++C+VCL EFE
Sbjct: 96  NLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVD----GSDCSVCLSEFE 155

Query: 125 EGELIKHLPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPDSS 160
           E E ++ LP CNH+FH PCID W ++HS+CPLCR  V   + P +S
Sbjct: 156 ENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTAS 196

[Close]

BLAST of Chy11G198520 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 1.5e-19
Identity = 65/195 (33.33%), Postives = 101/195 (51.79%), Query Frame = 0


Query: 5   PPPPSPV-----PDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGL-FTGRPTV 64
           PPPP P+        +S+   +++ I ++   FLL+S Y  + + C   H +   GR ++
Sbjct: 17  PPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSL 76

Query: 65  -QFEENPNNP----SLQIHGHGLETSMIRLLPISQFKK----------NEESESTTSFNT 124
            +   N  +P    S ++   GL+ S+IR +PI +FKK           E  E     + 
Sbjct: 77  SRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQ 136

Query: 125 ECAVCLGEFEEGELIKHLPNCNHSFHSPCIDAWFRNHSSCPLCRLQV---LSF-----ST 171
           EC+VCL EF++ E ++ +PNC+H FH  CID W +N+++CPLCR +V    SF     S 
Sbjct: 137 ECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSA 196

[Close]

BLAST of Chy11G198520 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 92.4 bits (228), Expect = 4.5e-19
Identity = 57/143 (39.86%), Postives = 80/143 (55.94%), Query Frame = 0


Query: 26  VVVCIVFL-LLSNYRLLKQLCRVLHGLFTGR--PTVQFEENPNNPSLQ-IHGHGLETSMI 85
           VV+ +VFL L + + LL+   R L      R    V F  +P+  +   +   GL+ ++I
Sbjct: 41  VVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPSTAATSVVASRGLDPNVI 100

Query: 86  RLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKHLPNCNHSFHSPCIDAWFRNHS 145
           + LP+  F     S+ T     ECAVCL EFEE E  + LPNC H+FH  CID WF +HS
Sbjct: 101 KSLPVFTF-----SDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHS 160

Query: 146 SCPLCRLQVLSFSTPDSSSAMLE 165
           +CPLCR  V S +  +S++A  E
Sbjct: 161 TCPLCRSLVESLAGIESTAAARE 178

[Close]

BLAST of Chy11G198520 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 92.0 bits (227), Expect = 5.9e-19
Identity = 61/191 (31.94%), Postives = 98/191 (51.31%), Query Frame = 0


Query: 5   PPPPSPVPD------YSSWSPWSISTIVVVCIVFLLLSNYRLLKQLC-RVLHGL------ 64
           PPPPS   D       S +SP  I+ I ++   F+L+S Y L+ + C R  H        
Sbjct: 38  PPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAA 97

Query: 65  --------FTGRPTVQFEEN-PNNPSLQI---HGHGLETSMIRLLPISQFKKNEESESTT 124
                   +T + T     N   NP+  I    G GL+ S+I+ + + +++K +      
Sbjct: 98  AINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVE-- 157

Query: 125 SFNTECAVCLGEFEEGELIKHLPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPDSS 171
             +++C+VCL EF+E E ++ LP CNH+FH PCID W ++HS+CPLCR  +++ S  +  
Sbjct: 158 --SSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIV 217

[Close]

BLAST of Chy11G198520 vs. TAIR 10
Match: AT5G10380.1 (RING/U-box superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 3.8e-18
Identity = 65/197 (32.99%), Postives = 88/197 (44.67%), Query Frame = 0


Query: 2   PSSPPPPSPVPDYSSWSPWSISTI-VVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQF 61
           P  PPPP P  + S   P SI  +  ++  +FL+   Y  + Q  R+     T   T Q 
Sbjct: 26  PPPPPPPPPPRELSLLLPTSICVVGSIILFLFLVFFLYLHITQQRRISAASVTPGDTNQQ 85

Query: 62  EENPNNPS---------LQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGE 121
           E+                QI   GL  S I  + +  FKK E         TEC+VCL E
Sbjct: 86  EDEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGIID----GTECSVCLNE 145

Query: 122 FEEGELIKHLPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTP----------DSSSA 179
           FEE E ++ LP C+H+FH  CID W  +H +CPLCR  VL  + P            S +
Sbjct: 146 FEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEPPHQETETNHQPDSES 205

The following BLAST results are available for this feature:

BLAST of Chy11G198520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LF64	1.0e-20	34.94	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9LSW9	2.2e-18	33.33	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
Q9SRQ8	8.2e-18	31.94	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
Q9LX93	5.3e-17	32.99	E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 ...	[more]
P93823	9.1e-17	34.52	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]

BLAST of Chy11G198520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCA5	4.1e-113	99.03	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G303210 PE...	[more]
A0A5A7V3S2	2.9e-106	92.68	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BIX6	2.9e-106	92.68	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103490579 PE=3 ...	[more]
A0A6A6KKG1	2.1e-40	50.51	RING-type E3 ubiquitin transferase OS=Hevea brasiliensis OX=3981 GN=GH714_013318...	[more]
A0A2C9W1B6	3.6e-40	48.22	RING-type E3 ubiquitin transferase OS=Manihot esculenta OX=3983 GN=MANES_04G0302...	[more]

BLAST of Chy11G198520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031743630.1	1.45e-145	99.03	RING-H2 finger protein ATL52-like [Cucumis sativus] >KGN47355.1 hypothetical pro...	[more]
XP_008448367.1	1.04e-136	92.68	PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo] >KAA0061954.1 RING-H...	[more]
KAG6570731.1	9.44e-116	80.28	RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_023512261.1	1.82e-113	78.87	RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]	[more]
XP_031247518.1	1.35e-53	49.48	RING-H2 finger protein ATL16-like [Pistacia vera]	[more]

BLAST of Chy11G198520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17600.1	7.4e-22	34.94	RING/U-box superfamily protein	[more]
AT5G43420.1	1.5e-19	33.33	RING/U-box superfamily protein	[more]
AT3G16720.1	4.5e-19	39.86	TOXICOS EN LEVADURA 2	[more]
AT3G03550.1	5.9e-19	31.94	RING/U-box superfamily protein	[more]
AT5G10380.1	3.8e-18	32.99	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 105..146 e-value: 2.6E-6 score: 37.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 104..147 e-value: 1.0E-12 score: 48.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 105..147 score: 12.430266
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 65..151 e-value: 4.7E-21 score: 76.3
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 14..159
None	No IPR available	PANTHER	PTHR45676:SF107	RING/U-BOX SUPERFAMILY PROTEIN	coord: 14..159
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 104..147 e-value: 6.51102E-17 score: 69.2529
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 104..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G198520.1	Chy11G198520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane