Chy11G198490 (gene) Cucumber (hystrix) v1

Overview
NameChy11G198490
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionProtein SODIUM POTASSIUM ROOT DEFECTIVE 1
LocationchrH11: 18914924 .. 18916068 (+)
RNA-Seq ExpressionChy11G198490
SyntenyChy11G198490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAAACTAGACCTTTTTTGCAAATCTAGAGCTTCCACGGCTGTTCGTTCAAGTTTCGGCCGACGTCCTGTCACCGGAGATGCTCATTCCGGCGATCGGAGAATAGGGCAGCTTCATTTTGAGAATCATAGAAAGAGTACGAGCTGTCCCACTCTGAATCGAAAGGAACTTAATGATTTACGAAGAAAAAGCTGTGCGGATGTTGATGATTTGAAGAGCCCTGTTTCCGGCTCCTCTGCTCGCTATCTTTTGGGTGATTCGCCGTTCCTTGATTGGTTTCCAGCCGTCTCCGGCGAGGAGGTTCCGGCACCGATGCCGGAGAAGAGGAAGATAATAAGCGACAATTCACAGAAATCTTTTTTGTTGAATCGTTCTTTGACTGTTCGTGAATATCGTGGCCTCAAATCTCCTTCCTCTGTTCTTGAATCCCCTGTTTTGAAAACACCTTCTTTAACTCAATCTCGTGATCAGGTCGTTAAATGACAAATTTTGTCTTTATACGTTGGAAAAAATTACATAAGTAATTTCATTTACGAAAATCTGATTGAACCATATTACATTTGTCCTTACTTTATCAAATTATAGAAACTAAATTGTATGGTTTTTGAAATAATGGGACAAAATTTGTAATTAAAATCTTGTTTCTTTTTCACATTACTAATATATTTGTGGTTGATCTTCTTTTTTTGAGTTCATAGGTGGTGGTTTTGAAGGTCTCATTGAACTGCAGAGGCTGTGAAAAGAAGGTGAAAAAGCATATCTCAAAGATGGAAGGTAAAGCTTCTCCACATTTCAAACCTAAAAAGTTACTAAATTTTTTGGCAAATATCAATTTAGGGATTATATCAACTTTTGCATCTCTGCCTGTGAAATTTATGAATTGATATTTTTTTTTCTTTATTATTATTTGAAAGAAGATGGGTTAGAAGTATAGATTTATGAAAACAGTGTTGATGAATCATGCAGGAGTGACCTCATATAGTGTGGATTTCACAACAAAAAAAGTGACCATAATTGGGGATTTAACCCCTTTTGATGTGTTGGCCAGTGTGTCGAAAGTGAAGTCTGCTCAGTTTTGGCCATCACCAAATTCTTCTTCATCTTCTACTCCACAATCTTCTTCATCATCATCAACAATTTGA

mRNA sequence

ATGAAAAAACTAGACCTTTTTTGCAAATCTAGAGCTTCCACGGCTGTTCGTTCAAGTTTCGGCCGACGTCCTGTCACCGGAGATGCTCATTCCGGCGATCGGAGAATAGGGCAGCTTCATTTTGAGAATCATAGAAAGAGTACGAGCTGTCCCACTCTGAATCGAAAGGAACTTAATGATTTACGAAGAAAAAGCTGTGCGGATGTTGATGATTTGAAGAGCCCTGTTTCCGGCTCCTCTGCTCGCTATCTTTTGGGTGATTCGCCGTTCCTTGATTGGTTTCCAGCCGTCTCCGGCGAGGAGGTTCCGGCACCGATGCCGGAGAAGAGGAAGATAATAAGCGACAATTCACAGAAATCTTTTTTGTTGAATCGTTCTTTGACTGTTCGTGAATATCGTGGCCTCAAATCTCCTTCCTCTGTTCTTGAATCCCCTGTTTTGAAAACACCTTCTTTAACTCAATCTCGTGATCAGGTGGTGGTTTTGAAGGTCTCATTGAACTGCAGAGGCTGTGAAAAGAAGGTGAAAAAGCATATCTCAAAGATGGAAGGAGTGACCTCATATAGTGTGGATTTCACAACAAAAAAAGTGACCATAATTGGGGATTTAACCCCTTTTGATGTGTTGGCCAGTGTGTCGAAAGTGAAGTCTGCTCAGTTTTGGCCATCACCAAATTCTTCTTCATCTTCTACTCCACAATCTTCTTCATCATCATCAACAATTTGA

Coding sequence (CDS)

ATGAAAAAACTAGACCTTTTTTGCAAATCTAGAGCTTCCACGGCTGTTCGTTCAAGTTTCGGCCGACGTCCTGTCACCGGAGATGCTCATTCCGGCGATCGGAGAATAGGGCAGCTTCATTTTGAGAATCATAGAAAGAGTACGAGCTGTCCCACTCTGAATCGAAAGGAACTTAATGATTTACGAAGAAAAAGCTGTGCGGATGTTGATGATTTGAAGAGCCCTGTTTCCGGCTCCTCTGCTCGCTATCTTTTGGGTGATTCGCCGTTCCTTGATTGGTTTCCAGCCGTCTCCGGCGAGGAGGTTCCGGCACCGATGCCGGAGAAGAGGAAGATAATAAGCGACAATTCACAGAAATCTTTTTTGTTGAATCGTTCTTTGACTGTTCGTGAATATCGTGGCCTCAAATCTCCTTCCTCTGTTCTTGAATCCCCTGTTTTGAAAACACCTTCTTTAACTCAATCTCGTGATCAGGTGGTGGTTTTGAAGGTCTCATTGAACTGCAGAGGCTGTGAAAAGAAGGTGAAAAAGCATATCTCAAAGATGGAAGGAGTGACCTCATATAGTGTGGATTTCACAACAAAAAAAGTGACCATAATTGGGGATTTAACCCCTTTTGATGTGTTGGCCAGTGTGTCGAAAGTGAAGTCTGCTCAGTTTTGGCCATCACCAAATTCTTCTTCATCTTCTACTCCACAATCTTCTTCATCATCATCAACAATTTGA

Protein sequence

MKKLDLFCKSRASTAVRSSFGRRPVTGDAHSGDRRIGQLHFENHRKSTSCPTLNRKELNDLRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEEVPAPMPEKRKIISDNSQKSFLLNRSLTVREYRGLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHISKMEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKSAQFWPSPNSSSSSTPQSSSSSSTI*
Homology
BLAST of Chy11G198490 vs. ExPASy Swiss-Prot
Match: Q8LDS4 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.5e-23
Identity = 63/136 (46.32%), Postives = 86/136 (63.24%), Query Frame = 0

Query: 90  FLDWFPAVSGEEVPAPMPEKRKIISDNSQKSFLLNRSLTVREYRGLKSPSSVLESPVLKT 149
           FLD+ P +S +    P  E  K  S  +  S L ++ ++  +++    P      P    
Sbjct: 183 FLDYEPVLSPDN---PFSEPTK-ASPTASLSSLEDKDVSSPDFKFSPPPPPPPSPPQSSP 242

Query: 150 PS---LTQSRDQVVVLKVSLNCRGCEKKVKKHISKMEGVTSYSVDFTTKKVTIIGDLTPF 209
           PS      S DQVVVL+VSL+C+GC  KVKKH+SK++GVTSY++DF  KKVT+ GD+TP 
Sbjct: 243 PSPPEKNSSSDQVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPL 302

Query: 210 DVLASVSKVKSAQFWP 223
            VLAS+SKVK+AQFWP
Sbjct: 303 TVLASISKVKNAQFWP 314

BLAST of Chy11G198490 vs. ExPASy Swiss-Prot
Match: Q58FZ0 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAKR2 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.4e-21
Identity = 80/225 (35.56%), Postives = 119/225 (52.89%), Query Frame = 0

Query: 2   KKLDLFCKSRASTAVRSSFGRRPVTGDAHSGDRRIGQLHFENHRKSTSCPTLNRKELNDL 61
           KKL+++ K R     RS  GRR   G    G   + +L        T+   L RK  + +
Sbjct: 72  KKLEIY-KGR-----RSITGRRSTGGGGGGGAAALLKL-------ITNDIGLARKSFSCV 131

Query: 62  RRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSG--EEVPAPMPEKRKIISDNSQK 121
            R +C   D +K+PV   S RYLLG  P      +++G  ++ PA   E           
Sbjct: 132 ARPAC---DLIKTPV--GSTRYLLGSDP-----DSITGSVDQDPAKTVE----------- 191

Query: 122 SFLLNRSLTVREYRGLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHI 181
                           ++P+   ++   K  +   +  QVVVLKVSL+CRGCE KV+KH+
Sbjct: 192 ---------------AEAPAGEDKTLTEKKTTCGDTDQQVVVLKVSLHCRGCEGKVRKHL 247

Query: 182 SKMEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKSAQFWPSP 225
           ++M+GVTS+++DF  KKVT+ GD+TP ++L S+SKVK+AQFW +P
Sbjct: 252 ARMQGVTSFNIDFAAKKVTVTGDITPLEILDSISKVKNAQFWTNP 247

BLAST of Chy11G198490 vs. ExPASy Swiss-Prot
Match: Q8RXH8 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAKR3 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.9e-19
Identity = 88/249 (35.34%), Postives = 123/249 (49.40%), Query Frame = 0

Query: 1   MKKLDLFCKSRASTAVRSSFGRRPVTG---DAHSGDRRIGQLHFENHRKSTSCPTLNRKE 60
           MK    +C S+ASTA  +  G R VT    D H+   + G+  F     S        ++
Sbjct: 1   MKAGMFYCASQASTATAN--GERTVTARAIDRHNPIIKDGRRSFTAPCSSGDDYVAPYRQ 60

Query: 61  LNDLRR--KSCAD-----VDDLKSPVSGSSARYLLGD-SPFLDWFPAVSGEEVPAPMPEK 120
           L+ + R   S  D     VD  +   SGS  + +  D S     F  V       P   +
Sbjct: 61  LSKITRVPSSSGDGKSVQVDKGRRSNSGSLMKLISYDVSLARKSFGCVVATPKTPPGSTR 120

Query: 121 RKIISDNSQKSFLLNRSLTVREYRGLKSPSSVLESPV-LKTPSLTQSRDQVVVLKVSL-- 180
             + SD    +    +     E     +P      PV  K  S     DQVVVL+VSL  
Sbjct: 121 YLLGSDPVSLAGSTGQDTVATEESEASAPKRGSSGPVEEKKKSSGSGSDQVVVLRVSLHC 180

Query: 181 NCRGCEKKVKKHISKMEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKSAQFW-PSPN 235
           +CRGC+ KVKKH+SKM+GVTS+++DF +KKVT+ GD+TP +VL  +SKVK+AQFW P P 
Sbjct: 181 HCRGCQGKVKKHLSKMQGVTSFNIDFASKKVTVTGDITPLEVLGCLSKVKNAQFWTPPPP 240

BLAST of Chy11G198490 vs. ExPASy Swiss-Prot
Match: O82089 (Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.2e-07
Identity = 29/66 (43.94%), Postives = 42/66 (63.64%), Query Frame = 0

Query: 158 QVVVLKVSLNCRGCEKKVKKHISKMEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKV-K 217
           Q VVLKV ++C+GC   V + + KMEGV S+ +D   +KVT+ G++ P  V  +VSK  K
Sbjct: 3   QTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKTGK 62

Query: 218 SAQFWP 223
              +WP
Sbjct: 63  KTSYWP 68

BLAST of Chy11G198490 vs. ExPASy Swiss-Prot
Match: Q84J88 (Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX=3702 GN=HIPP36 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.4e-07
Identity = 25/64 (39.06%), Postives = 47/64 (73.44%), Query Frame = 0

Query: 161 VLKVSLNCRGCEKKVKKHISKMEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKV-KSAQ 220
           VL+VS++C GC++K+KK +SK++GV + ++D   +KVT+IG++ P  ++  + K  + A+
Sbjct: 33  VLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRHAE 92

Query: 221 FWPS 224
            WP+
Sbjct: 93  LWPT 96

BLAST of Chy11G198490 vs. ExPASy TrEMBL
Match: A0A0A0KG24 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G302690 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.7e-121
Identity = 232/240 (96.67%), Postives = 235/240 (97.92%), Query Frame = 0

Query: 1   MKKLDLFCKSRASTAVRSSFGRRPVTGDAHSGDRRIGQLHFENHRKSTSCPTLNRKELND 60
           MKKLD+FCKSRASTAVRSSF RRP+TGDAHSGDRR GQLHFENHRKSTSC TLNRKELND
Sbjct: 1   MKKLDIFCKSRASTAVRSSFARRPLTGDAHSGDRRKGQLHFENHRKSTSCSTLNRKELND 60

Query: 61  LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEEVPAPMPEKRKIISDNSQKS 120
           LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEEVPA MPEKRKIISDNSQKS
Sbjct: 61  LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEEVPALMPEKRKIISDNSQKS 120

Query: 121 FLLNRSLTVREYRGLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHIS 180
           FLLNRSLTVREY GLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHIS
Sbjct: 121 FLLNRSLTVREYGGLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHIS 180

Query: 181 KMEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKSAQFWPSPNSSSSSTPQSSSSSST 240
           KMEGVTSYSVDFTTKKVTIIGD+TPFDVLASVSKVKSAQFWPSPNSSSSSTPQSSSSSST
Sbjct: 181 KMEGVTSYSVDFTTKKVTIIGDITPFDVLASVSKVKSAQFWPSPNSSSSSTPQSSSSSST 240

BLAST of Chy11G198490 vs. ExPASy TrEMBL
Match: A0A5A7V4V4 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G002500 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 2.0e-87
Identity = 170/184 (92.39%), Postives = 174/184 (94.57%), Query Frame = 0

Query: 1   MKKLDLFCKSRASTAVRSSFGRRPVTGDAHSGDRRIGQLHFENHRKSTSC-PTLNRKELN 60
           MKKLDLFCKSRASTAVRSSFGRRPVTGDAHSGDRR GQLHFENHRKSTSC  T+NRKELN
Sbjct: 1   MKKLDLFCKSRASTAVRSSFGRRPVTGDAHSGDRRKGQLHFENHRKSTSCSSTVNRKELN 60

Query: 61  DLRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEEVPAPMPEKRKIISDNSQK 120
           DLRRKSCAD DDLKSPVSGSSARYLLGD+PFLDWFPA SG+E PAP+PEKRKIIS NSQK
Sbjct: 61  DLRRKSCADADDLKSPVSGSSARYLLGDAPFLDWFPAASGDEPPAPVPEKRKIISHNSQK 120

Query: 121 SFLLNRSLTVREYRGLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHI 180
           SF LNRSLTV EYRGLKSPSSVLESPVLKT SLTQSRDQVVVLKVSLNCRGCEKKVKKHI
Sbjct: 121 SFSLNRSLTVHEYRGLKSPSSVLESPVLKTSSLTQSRDQVVVLKVSLNCRGCEKKVKKHI 180

Query: 181 SKME 184
           SKME
Sbjct: 181 SKME 184

BLAST of Chy11G198490 vs. ExPASy TrEMBL
Match: A0A6J1J8X9 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111484523 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.7e-87
Identity = 186/245 (75.92%), Postives = 203/245 (82.86%), Query Frame = 0

Query: 1   MKKLDLFCKSRASTAVRSSFGRRPVTGDAHSGDRRIGQLHFENHRKSTSCPTLNRKELND 60
           MKKLD FCKSRASTAVRSSFGRRPV GDA+SGDRR  QL FENHRKSTSC ++NRK+  D
Sbjct: 1   MKKLDFFCKSRASTAVRSSFGRRPVDGDANSGDRRKWQLPFENHRKSTSCSSVNRKDHYD 60

Query: 61  LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEEVPAPMPEKRKIISDNSQKS 120
           LRRKSCADVDDLKS VSGSSARYLL DS F+DW PAVSGE+ PA  P +R +IS +S   
Sbjct: 61  LRRKSCADVDDLKSSVSGSSARYLLSDSSFIDWLPAVSGEDFPAKPPNERNMISHSS--- 120

Query: 121 FLLNRSLTVREYRGLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHIS 180
             L RSLTV EYRG KSPSSVL+SPVLKT S +   DQVVVLKVSLNC+GCEKKVKKHIS
Sbjct: 121 --LTRSLTVHEYRGQKSPSSVLQSPVLKTAS-SAVHDQVVVLKVSLNCKGCEKKVKKHIS 180

Query: 181 KMEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKSAQFWPSP------NSSSSSTPQS 240
           KMEGV+SYSVDFT KKVTIIG ++PFDVLASVSKVK AQFW SP      +SSSSSTPQS
Sbjct: 181 KMEGVSSYSVDFTAKKVTIIGAVSPFDVLASVSKVKYAQFWTSPSSSSCSSSSSSSTPQS 239

BLAST of Chy11G198490 vs. ExPASy TrEMBL
Match: A0A6J1D3S6 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017000 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.7e-87
Identity = 185/247 (74.90%), Postives = 201/247 (81.38%), Query Frame = 0

Query: 1   MKKLDLFCKSRASTAVRSSFGRRPVTGDAHSGDRRIGQLHFENHRKSTSCPTLNRKELND 60
           MK LDLFCKSRASTAV SS  RRPV    +SG+RR GQLHFE HRKSTSC + NRK+  +
Sbjct: 1   MKTLDLFCKSRASTAVCSSLDRRPVAARGYSGNRRKGQLHFEKHRKSTSCSSANRKDDFN 60

Query: 61  LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEEVPAPMPEKRKIISDNSQKS 120
            RRKSCADVDDLKSP SGSSARYLLGDSPF+DWFPA SGE+ PA  PE+R      +QKS
Sbjct: 61  FRRKSCADVDDLKSPASGSSARYLLGDSPFIDWFPAASGEDFPANPPEER------TQKS 120

Query: 121 FLLNRSLTVREYRGLKSPSSVL--ESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKH 180
             L RSLT  EYRGLKSPSSVL  ESPVLK+PS  QSR QVVVLKVSLNC+GCEKKVKKH
Sbjct: 121 SSLTRSLTAHEYRGLKSPSSVLSHESPVLKSPSSAQSRHQVVVLKVSLNCKGCEKKVKKH 180

Query: 181 ISKMEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKSAQFWPSP-----NSSSSSTPQ 240
           ISKMEGVTSYSVDFTTKKVTIIG++TPF VL SVSKVK AQ WPSP     +SSSSSTP+
Sbjct: 181 ISKMEGVTSYSVDFTTKKVTIIGEVTPFGVLESVSKVKHAQLWPSPTSSTSSSSSSSTPK 240

BLAST of Chy11G198490 vs. ExPASy TrEMBL
Match: A0A6J1FTK0 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like OS=Cucurbita moschata OX=3662 GN=LOC111448670 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 1.1e-85
Identity = 184/246 (74.80%), Postives = 201/246 (81.71%), Query Frame = 0

Query: 1   MKKLDLFCKSRASTAVRSSFGRRPVTGDAHSGDRRIGQLHFENHRKSTSCPTLNRKELND 60
           MKKLD FCKSRASTAVRSSFGRRPV GD +SGDRR  QL FENHRKSTSC ++NRK+  D
Sbjct: 1   MKKLDFFCKSRASTAVRSSFGRRPVDGDENSGDRRKWQLPFENHRKSTSCSSVNRKDHYD 60

Query: 61  LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEEVPAPMPEKRKIISDNSQKS 120
           LRRKSCADVDDLKS VSGSSARYLL DS F+DW PAVSGE+ PA  P +R +IS +S   
Sbjct: 61  LRRKSCADVDDLKSSVSGSSARYLLSDSSFIDWLPAVSGEDFPAKPPNERNMISHSS--- 120

Query: 121 FLLNRSLTVREYRGLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHIS 180
             L RSLTV EYRG KSPSSVL+SPVLKT S +   DQVVVLKVSLNC+GCEKKVKKHIS
Sbjct: 121 --LTRSLTVHEYRGQKSPSSVLQSPVLKTAS-SAVHDQVVVLKVSLNCKGCEKKVKKHIS 180

Query: 181 KMEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKSAQFWP-------SPNSSSSSTPQ 240
           KMEGV+SYSVDFT KKVTIIG ++PFDVLASVSKVK AQFW        S +SSSSSTPQ
Sbjct: 181 KMEGVSSYSVDFTAKKVTIIGAVSPFDVLASVSKVKYAQFWTSLSSSSCSSSSSSSSTPQ 240

BLAST of Chy11G198490 vs. NCBI nr
Match: XP_004148220.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1 [Cucumis sativus] >KGN47352.1 hypothetical protein Csa_023044 [Cucumis sativus])

HSP 1 Score: 446 bits (1148), Expect = 1.58e-157
Identity = 232/241 (96.27%), Postives = 235/241 (97.51%), Query Frame = 0

Query: 1   MKKLDLFCKSRASTAVRSSFGRRPVTGDAHSGDRRIGQLHFENHRKSTSCPTLNRKELND 60
           MKKLD+FCKSRASTAVRSSF RRP+TGDAHSGDRR GQLHFENHRKSTSC TLNRKELND
Sbjct: 1   MKKLDIFCKSRASTAVRSSFARRPLTGDAHSGDRRKGQLHFENHRKSTSCSTLNRKELND 60

Query: 61  LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEEVPAPMPEKRKIISDNSQKS 120
           LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEEVPA MPEKRKIISDNSQKS
Sbjct: 61  LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEEVPALMPEKRKIISDNSQKS 120

Query: 121 FLLNRSLTVREYRGLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHIS 180
           FLLNRSLTVREY GLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHIS
Sbjct: 121 FLLNRSLTVREYGGLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHIS 180

Query: 181 KMEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKSAQFWPSPNSSSSSTPQSSSSSST 240
           KMEGVTSYSVDFTTKKVTIIGD+TPFDVLASVSKVKSAQFWPSPNSSSSSTPQSSSSSST
Sbjct: 181 KMEGVTSYSVDFTTKKVTIIGDITPFDVLASVSKVKSAQFWPSPNSSSSSTPQSSSSSST 240

BLAST of Chy11G198490 vs. NCBI nr
Match: XP_038901867.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like [Benincasa hispida])

HSP 1 Score: 424 bits (1090), Expect = 1.22e-148
Identity = 221/239 (92.47%), Postives = 228/239 (95.40%), Query Frame = 0

Query: 1   MKKLDLFCKSRASTAVRSSFGRRPVTGDAHSGDRRIGQLHFENHRKSTSCPTLNRKELND 60
           MKKLDLFCKSRASTAVRSSFGRRPV GDAHSGDRR GQLHFENHRKSTSC T+NRKELND
Sbjct: 1   MKKLDLFCKSRASTAVRSSFGRRPVAGDAHSGDRRKGQLHFENHRKSTSCSTVNRKELND 60

Query: 61  LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEEVPAPMPEKRKIISDNSQKS 120
           LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGE+ PAPMPEKRKIIS++S+KS
Sbjct: 61  LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEDFPAPMPEKRKIISNSSEKS 120

Query: 121 FLLNRSLTVREYRGLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHIS 180
             L+RSLTV EYRGLKSPSSVLESPVLKT SLT SRDQVVVLKVSLNC+GCEKKVKKHIS
Sbjct: 121 CSLSRSLTVHEYRGLKSPSSVLESPVLKTSSLTHSRDQVVVLKVSLNCKGCEKKVKKHIS 180

Query: 181 KMEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKSAQFWPSPNSSSSSTPQSSSSSS 239
           KMEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVK AQFW SPNSSSSSTPQSSSSSS
Sbjct: 181 KMEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKYAQFWQSPNSSSSSTPQSSSSSS 239

BLAST of Chy11G198490 vs. NCBI nr
Match: KAA0061957.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 334 bits (857), Expect = 8.81e-114
Identity = 170/184 (92.39%), Postives = 174/184 (94.57%), Query Frame = 0

Query: 1   MKKLDLFCKSRASTAVRSSFGRRPVTGDAHSGDRRIGQLHFENHRKSTSCP-TLNRKELN 60
           MKKLDLFCKSRASTAVRSSFGRRPVTGDAHSGDRR GQLHFENHRKSTSC  T+NRKELN
Sbjct: 1   MKKLDLFCKSRASTAVRSSFGRRPVTGDAHSGDRRKGQLHFENHRKSTSCSSTVNRKELN 60

Query: 61  DLRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEEVPAPMPEKRKIISDNSQK 120
           DLRRKSCAD DDLKSPVSGSSARYLLGD+PFLDWFPA SG+E PAP+PEKRKIIS NSQK
Sbjct: 61  DLRRKSCADADDLKSPVSGSSARYLLGDAPFLDWFPAASGDEPPAPVPEKRKIISHNSQK 120

Query: 121 SFLLNRSLTVREYRGLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHI 180
           SF LNRSLTV EYRGLKSPSSVLESPVLKT SLTQSRDQVVVLKVSLNCRGCEKKVKKHI
Sbjct: 121 SFSLNRSLTVHEYRGLKSPSSVLESPVLKTSSLTQSRDQVVVLKVSLNCRGCEKKVKKHI 180

Query: 181 SKME 183
           SKME
Sbjct: 181 SKME 184

BLAST of Chy11G198490 vs. NCBI nr
Match: KAG6570732.1 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 334 bits (857), Expect = 3.21e-113
Identity = 186/244 (76.23%), Postives = 203/244 (83.20%), Query Frame = 0

Query: 1   MKKLDLFCKSRASTAVRSSFGRRPVTGDAHSGDRRIGQLHFENHRKSTSCPTLNRKELND 60
           MKKLD FCKSRASTAVRSSFGRRPV GDA+SGDRR  QL FENHRKSTSC ++NRK+  D
Sbjct: 1   MKKLDFFCKSRASTAVRSSFGRRPVDGDANSGDRRKWQLPFENHRKSTSCSSVNRKDHYD 60

Query: 61  LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEEVPAPMPEKRKIISDNSQKS 120
           LRRKSCADVDDLKS VSGSSARYLL DS F+DW PAVSGE+ PA  P++R +IS +S   
Sbjct: 61  LRRKSCADVDDLKSSVSGSSARYLLSDSSFIDWLPAVSGEDFPAKPPKERNMISHSS--- 120

Query: 121 FLLNRSLTVREYRGLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHIS 180
             L RSLTV EYRG KSPSSVL+SPVLKT S +   DQVVVLKVSLNC+GCEKKVKKHIS
Sbjct: 121 --LTRSLTVHEYRGQKSPSSVLQSPVLKTAS-SAVHDQVVVLKVSLNCKGCEKKVKKHIS 180

Query: 181 KMEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKSAQFWPSPNSSS------SSTPQS 238
           KMEGV+SYSVDFT KKVTIIG ++PFDVLASVSKVK AQFW SP+SSS      SSTPQS
Sbjct: 181 KMEGVSSYSVDFTAKKVTIIGAVSPFDVLASVSKVKYAQFWTSPSSSSCSSSSSSSTPQS 238

BLAST of Chy11G198490 vs. NCBI nr
Match: XP_022986932.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like [Cucurbita maxima])

HSP 1 Score: 334 bits (856), Expect = 4.55e-113
Identity = 186/244 (76.23%), Postives = 202/244 (82.79%), Query Frame = 0

Query: 1   MKKLDLFCKSRASTAVRSSFGRRPVTGDAHSGDRRIGQLHFENHRKSTSCPTLNRKELND 60
           MKKLD FCKSRASTAVRSSFGRRPV GDA+SGDRR  QL FENHRKSTSC ++NRK+  D
Sbjct: 1   MKKLDFFCKSRASTAVRSSFGRRPVDGDANSGDRRKWQLPFENHRKSTSCSSVNRKDHYD 60

Query: 61  LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEEVPAPMPEKRKIISDNSQKS 120
           LRRKSCADVDDLKS VSGSSARYLL DS F+DW PAVSGE+ PA  P +R +IS +S   
Sbjct: 61  LRRKSCADVDDLKSSVSGSSARYLLSDSSFIDWLPAVSGEDFPAKPPNERNMISHSS--- 120

Query: 121 FLLNRSLTVREYRGLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHIS 180
             L RSLTV EYRG KSPSSVL+SPVLKT S +   DQVVVLKVSLNC+GCEKKVKKHIS
Sbjct: 121 --LTRSLTVHEYRGQKSPSSVLQSPVLKTAS-SAVHDQVVVLKVSLNCKGCEKKVKKHIS 180

Query: 181 KMEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKSAQFWPSPNSSS------SSTPQS 238
           KMEGV+SYSVDFT KKVTIIG ++PFDVLASVSKVK AQFW SP+SSS      SSTPQS
Sbjct: 181 KMEGVSSYSVDFTAKKVTIIGAVSPFDVLASVSKVKYAQFWTSPSSSSCSSSSSSSTPQS 238

BLAST of Chy11G198490 vs. TAIR 10
Match: AT2G28660.1 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-27
Identity = 98/271 (36.16%), Postives = 135/271 (49.82%), Query Frame = 0

Query: 1   MKKLDLFCKSRASTAVRSSFGRRPVTGDAHSGDRRIGQLHFENH---------------- 60
           M+  D+FC S ASTAVR S          H G+   G+  F++H                
Sbjct: 1   MRFSDIFCSSPASTAVRHSTLH-------HDGNVTGGRRSFQSHLRSQNPSKKKDKTVPC 60

Query: 61  ----------------RKSTSCPTLNRKELN-------DLRRKSCADVDDL---KSPVSG 120
                           R S   P+  R ++         +RRKS ADV DL   +S +  
Sbjct: 61  FSSEMPLIPIPRHLSCRNSFESPSGFRPKIASARGSDVQIRRKSSADVSDLRRSRSSLLS 120

Query: 121 SSARYLLGDSPFLDWFPAVSGEEVPAPMPEKRKIISDNSQKSFLL--NRSLTVREYRGLK 180
           SS+RYLL D        ++ G+       +K   +S +  K  +L  +R++T        
Sbjct: 121 SSSRYLLKD------HKSLKGD-------DKDLWLSSDRSKDLILYRDRNVTSSASSSSS 180

Query: 181 SPSSVLESPVLKTPSLTQSR-DQVVVLKVSLNCRGCEKKVKKHISKMEGVTSYSVDFTTK 227
           S SS   S V    S   S  DQVVVL+VS++C+GCE KV+KHISKMEGVTSY++D  TK
Sbjct: 181 SSSSSFSSSVTNVSSPAPSTDDQVVVLRVSIHCKGCEGKVRKHISKMEGVTSYTIDLATK 240

BLAST of Chy11G198490 vs. TAIR 10
Match: AT5G02600.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 3.2e-24
Identity = 63/136 (46.32%), Postives = 86/136 (63.24%), Query Frame = 0

Query: 90  FLDWFPAVSGEEVPAPMPEKRKIISDNSQKSFLLNRSLTVREYRGLKSPSSVLESPVLKT 149
           FLD+ P +S +    P  E  K  S  +  S L ++ ++  +++    P      P    
Sbjct: 183 FLDYEPVLSPDN---PFSEPTK-ASPTASLSSLEDKDVSSPDFKFSPPPPPPPSPPQSSP 242

Query: 150 PS---LTQSRDQVVVLKVSLNCRGCEKKVKKHISKMEGVTSYSVDFTTKKVTIIGDLTPF 209
           PS      S DQVVVL+VSL+C+GC  KVKKH+SK++GVTSY++DF  KKVT+ GD+TP 
Sbjct: 243 PSPPEKNSSSDQVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPL 302

Query: 210 DVLASVSKVKSAQFWP 223
            VLAS+SKVK+AQFWP
Sbjct: 303 TVLASISKVKNAQFWP 314

BLAST of Chy11G198490 vs. TAIR 10
Match: AT5G02600.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 3.2e-24
Identity = 63/136 (46.32%), Postives = 86/136 (63.24%), Query Frame = 0

Query: 90  FLDWFPAVSGEEVPAPMPEKRKIISDNSQKSFLLNRSLTVREYRGLKSPSSVLESPVLKT 149
           FLD+ P +S +    P  E  K  S  +  S L ++ ++  +++    P      P    
Sbjct: 183 FLDYEPVLSPDN---PFSEPTK-ASPTASLSSLEDKDVSSPDFKFSPPPPPPPSPPQSSP 242

Query: 150 PS---LTQSRDQVVVLKVSLNCRGCEKKVKKHISKMEGVTSYSVDFTTKKVTIIGDLTPF 209
           PS      S DQVVVL+VSL+C+GC  KVKKH+SK++GVTSY++DF  KKVT+ GD+TP 
Sbjct: 243 PSPPEKNSSSDQVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPL 302

Query: 210 DVLASVSKVKSAQFWP 223
            VLAS+SKVK+AQFWP
Sbjct: 303 TVLASISKVKNAQFWP 314

BLAST of Chy11G198490 vs. TAIR 10
Match: AT2G37390.2 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 106.7 bits (265), Expect = 2.7e-23
Identity = 83/231 (35.93%), Postives = 120/231 (51.95%), Query Frame = 0

Query: 2   KKLDLFCKSRASTAVRSSFGRRPVTGDAHSGDRRIGQLHFENHRKSTSCPTLNRKELNDL 61
           KKL+++ K R     RS  GRR   G    G   + +L        T+   L RK  + +
Sbjct: 72  KKLEIY-KGR-----RSITGRRSTGGGGGGGAAALLKL-------ITNDIGLARKSFSCV 131

Query: 62  RRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSG--EEVPAPMPEKRKIISDNSQK 121
            R +C   D +K+PV   S RYLLG  P      +++G  ++ PA   E           
Sbjct: 132 ARPAC---DLIKTPV--GSTRYLLGSDP-----DSITGSVDQDPAKTVE----------- 191

Query: 122 SFLLNRSLTVREYRGLKSPSSVLESPVLKTPSLTQSR------DQVVVLKVSLNCRGCEK 181
                                  E+P  +  +LT+ +      DQVVVLKVSL+CRGCE 
Sbjct: 192 ----------------------AEAPAGEDKTLTEKKTTCGDTDQVVVLKVSLHCRGCEG 246

Query: 182 KVKKHISKMEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKSAQFWPSP 225
           KV+KH+++M+GVTS+++DF  KKVT+ GD+TP ++L S+SKVK+AQFW +P
Sbjct: 252 KVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSISKVKNAQFWTNP 246

BLAST of Chy11G198490 vs. TAIR 10
Match: AT2G37390.1 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 104.8 bits (260), Expect = 1.0e-22
Identity = 80/225 (35.56%), Postives = 119/225 (52.89%), Query Frame = 0

Query: 2   KKLDLFCKSRASTAVRSSFGRRPVTGDAHSGDRRIGQLHFENHRKSTSCPTLNRKELNDL 61
           KKL+++ K R     RS  GRR   G    G   + +L        T+   L RK  + +
Sbjct: 72  KKLEIY-KGR-----RSITGRRSTGGGGGGGAAALLKL-------ITNDIGLARKSFSCV 131

Query: 62  RRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSG--EEVPAPMPEKRKIISDNSQK 121
            R +C   D +K+PV   S RYLLG  P      +++G  ++ PA   E           
Sbjct: 132 ARPAC---DLIKTPV--GSTRYLLGSDP-----DSITGSVDQDPAKTVE----------- 191

Query: 122 SFLLNRSLTVREYRGLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHI 181
                           ++P+   ++   K  +   +  QVVVLKVSL+CRGCE KV+KH+
Sbjct: 192 ---------------AEAPAGEDKTLTEKKTTCGDTDQQVVVLKVSLHCRGCEGKVRKHL 247

Query: 182 SKMEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKSAQFWPSP 225
           ++M+GVTS+++DF  KKVT+ GD+TP ++L S+SKVK+AQFW +P
Sbjct: 252 ARMQGVTSFNIDFAAKKVTVTGDITPLEILDSISKVKNAQFWTNP 247

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8LDS44.5e-2346.32Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAK... [more]
Q58FZ01.4e-2135.56Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAK... [more]
Q8RXH83.9e-1935.34Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAK... [more]
O820891.2e-0743.94Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1[more]
Q84J883.4e-0739.06Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A0A0KG243.7e-12196.67HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G302690 PE=4 SV... [more]
A0A5A7V4V42.0e-8792.39Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A6J1J8X92.7e-8775.92protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1D3S62.7e-8774.90protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Momordica charantia... [more]
A0A6J1FTK01.1e-8574.80protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like OS=Cucurbita moschata OX=3662 GN=... [more]
Match NameE-valueIdentityDescription
XP_004148220.11.58e-15796.27protein SODIUM POTASSIUM ROOT DEFECTIVE 1 [Cucumis sativus] >KGN47352.1 hypothet... [more]
XP_038901867.11.22e-14892.47protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like [Benincasa hispida][more]
KAA0061957.18.81e-11492.39protein SODIUM POTASSIUM ROOT DEFECTIVE 1 [Cucumis melo var. makuwa][more]
KAG6570732.13.21e-11376.23Protein SODIUM POTASSIUM ROOT DEFECTIVE 2, partial [Cucurbita argyrosperma subsp... [more]
XP_022986932.14.55e-11376.23protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT2G28660.11.1e-2736.16Chloroplast-targeted copper chaperone protein [more]
AT5G02600.23.2e-2446.32Heavy metal transport/detoxification superfamily protein [more]
AT5G02600.13.2e-2446.32Heavy metal transport/detoxification superfamily protein [more]
AT2G37390.22.7e-2335.93Chloroplast-targeted copper chaperone protein [more]
AT2G37390.11.0e-2235.56Chloroplast-targeted copper chaperone protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.100coord: 155..219
e-value: 2.8E-15
score: 58.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..241
NoneNo IPR availablePANTHERPTHR46119:SF12HEAVY METAL-ASSOCIATED DOMAIN CONTAINING PROTEIN, EXPRESSEDcoord: 1..234
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 163..214
e-value: 4.0E-13
score: 49.6
IPR006121Heavy metal-associated domain, HMAPROSITEPS50846HMA_2coord: 158..218
score: 10.804061
IPR006121Heavy metal-associated domain, HMACDDcd00371HMAcoord: 161..214
e-value: 2.09384E-11
score: 56.0749
IPR044526Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3PANTHERPTHR46119OS08G0405700 PROTEINcoord: 1..234
IPR036163Heavy metal-associated domain superfamilySUPERFAMILY55008HMA, heavy metal-associated domaincoord: 158..215

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy11G198490.1Chy11G198490.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding